RchiOBHm_Chr2g0139071

Golgin candidate

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
56708466 .. 56717310
8845 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ50965

Sequence Viewer

Length: 3117 bp
ATGGCGTGGTTCAGTGGGAAAGTCTCGTTGGGGAACTTCCCCGATCTCGCCGGCGCTGTAAATAAGCTCCAGGAGAGCGTCAAGAACATCGAGAAGAATTTCGATACCGCCCTCGGGTTTGAAGAGAAGGAGAAGCTTGAATCCGCCAATGAAGCTTCAGGATTATGGCCTTCATCTACAGAAAGAAAAGCGCTATTTGATCCTGTTATGTCCTTTATGGGGCAAAAGAATGAGGATGACACTGTTGAATCATCACAGAAAGCTGAGTCTTCTGAGGCTCCACCACCTAAGGTTGAGAAATCACCAGCAGAGATTGAATCTTCACCAAAGGTTGAGATATCATCAGTGGAGCCTAAATCTCCACCTAAGGTTGAGAAATCGTCAGTGGAGCCTGAATCTCTACCTAAGAAATCATCAGTGGAGCCTGAACCTCCACAATGTTCATCTGCAGTTGACGAAAAGGATGGGGCAAGTGAAACATTACCACATTCTGTAACTGAACAGACTGCTGCTAAGGAGGAAAATGACGTTGCCGAGGAAAAAAAAGATGAAAATCATGCTGAGACTGCAGAAGAAACAAAGACTTTGTCATTAGAGCCTGAGAGATCAGAGTCTCAATCGCCCTCAGTGCCAGTTGGGGCAAATGAGCCTACCATGAGTGCCTCATCATCAGATTTTGTTGGTTCTCAAGAAGAAGACAATAAGATTTCAGTAGGGGGACTCTCAGAACTTTCAGAATCAGCTCAAGGACTGTCAGGAGCTGTTAATGTAGGTGAAGTAGAGGTGGGTGGTACTGCTCTGCACAGTGAGTCACATGATCATGCTGATGTGCATGAGAATGCGGATGCCCAGAAGGCACACAAAGAGAATGATAATGAAATTGTGACTCAGGCTGGAGATATTGCTGAAGTGGTTTCTATGGTCGAACCTGAAGAATCAACTGAGAGCCTGCCTCGAGATGTTGAGCCATCTGCTATTCACTCCGTTTCCACTGAGGTGACTCATAGCGCTGGTGGATCGCCTACCAACCAATTACCTAGTGTTTATGCTTCCAATGAGGCTTCGGATGTGTCTTCCGAGTTAGTTTTCAAACAAAAGGATGCTATCATTGAGGAACCTGGAATTGGTCATCGAGTTGATGAGAATGAAACCAACTATAATGAGCAACGTCTGAATTCAGGACAAAAGTCAGACTCTTCATACACGGGAGCAAATGTCTCTGATGCTTCCAACGCTTTGCTTGAATTAGAGAAGGTGAAGAAGGAGATGAAAATGATGGAAGCTGCATTGCAAGGTGCTGCAAGACAGGCTCAGGCAAAAGCTGATGAAATTGCCAAGTTCATGAACGAAAATGAGGAATTAAAAACTGTGGTTGAGGATTTGAAGAGAAAATCCAGTGAAGCAGAAGTTGAGTCTCTGCGGGAGGAGTACCATCAAAGGGTTGCAACACTTGAAAGGAAGGTTTACGCTCTTACTAAGGAAAGGGACACGCTTCGAAGGGAGCAGAATAAGAAAAGTGATGCAGCTGCACTTTTGAAGGAAAAGGATGAAATAATTACTCAAGTTATGGCTGAAGGTGAAGAGCTTTCAAAAAAACAGGCTACTCAAGAAGGTCTCATTAGGAAACTAAGGGCTCAGATTAGAGAGTTCGAAGAAGAGAAGAAAGGGCTGACTACCAAGCTCCAGGTAGAAGAGAATAAAGTAGAGAGTATCAAGAGGGACAAGACAGCTACAGAAAAGTTACTGCAGGAAACTATAGAAAAGCACCAAACAGAACTTGCAGCACAGAAAGAGTATTATACTAATGCTTTGGCTGCTGCCAAGGACGCAGAAGCAATGGCCGAGGCACGTGCTAACAATGAAGCCAGATCTGAACTAGAGAGTCGTCTAAGAGACGCTCAGGAGCGTGAAGCTATGCTAGTTCAGGCACTCGAAGAATTACGACAAACTCTAACTAGAACAGAACAGCAGGCAGTATTTAAAGAAGACATGCTTCGCCGGGACGTTGAGGATCTTCAAAAACGTTATCAAGCAAGTGAGCGGCGATGTGAGGAATTGATCACGCAAGTACCAGAATCTACCAGGCCTCTTCTTAGGCAAATCGAAGCAATGCAGGAAACAACTTCCAGAAGGGCAGAAGCTTGGGCAGCTGTTGAGAGGTCTCTTACCAATCGACTACAGGAAGCAGAGGCCAAAGCTGCTGCTGCTGAGGAAAGAGAGCGATCGGTGAATGAACGCTTGTCTCAAACCTTATCTCGTATTAACGTTCTTGAGGCTCAGATTTCATGTCTTAGAGCCGAGCAATCCCAATTAAGTAAGTCTCTTGAAAAGGAGAGACAAAGAGCAGCTGAAAATAGGCAGGAGTACCTTGCTGCAAAGGAAGAAGCTGATACTCAAGAAGGCCGTGCAAACCAGCTTGAAGAAGAAATTCGTGAACTCAGGCGAAAACATAAGCAGGAGTTACAAGATGCTTTGATGCACAGGGAACTGCTACAGCAGGAGGTAGAAAGGGAGAAAGCTGCTAGGTTGGATTTGGAAAGGACATCTCGTGTCCGTTCTGCTACTGTATCTGATCAGACAACTATAACAAGGCAGAGTTCTACTTTTGAGAATGGAAGCTTGAACAGGAAACTTTCAAGTGCTAGCAGCCTAGGGAGCATGGAGGAAAGCTATTTTCTACAAGCATCTCTGGACTCGTCTGATAGTTTCTCTGAGAGGAGAAATGCTGGGGAAGCAACCATGACTCCATACTATATGAAGAGCATGACGCCTAGTGCTTTTGAAGCTTCCCTTCGTCAGAAGGAGGGTGAACTTGCATCTTACATGTCTCGTTTGGCATCCATGGAATCTATTCGCGATTCTCTCGCAGAGGAGTTGGTCAAAATGACAGAACAGTGTGAAAAGTTACGAGCGGAGGCTGGCATGTTACCTGGCATCAGAGCTGAGCTAGATGCACTAAGGAGGAGGCATTCTGCTGCACTGGAGCTGATGGGTGAACGAGATGAGGAGCTGGAGGAACTTCGTGCGGATATTGTAGACTTGAAGGAGATGTACAGAGAGCAAGTAAACTTGCTTGTGAACAAGATACAGATAATGAGTTCAGCAGTTGGAAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1038

Amino Acids

115.75

Weight (kDa)

4.84

Isoelectric Point (pI)

62.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TMF_DNA_bd PF12329 507 - 578 4.2e-14 TATA element modulatory factor 1 DNA binding
TMF_TATA_bd PF12325 922 - 1024 6.1e-28 TATA element modulatory factor 1 TATA binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 2041, 2912
AccI GTMKAC 1 cut(s) 3036
AccII CGCG 1 cut(s) 2856
AciI CCGC 7 cut(s) 108, 144, 842, 1420, 2041, 2912, 3026
AclI AACGTT 2 cut(s) 2023, 2265
AclWI GGATC 3 cut(s) 194, 1024, 2019
AcoI YGGCCR 1 cut(s) 1839
AcsI RAATTY 3 cut(s) 97, 1174, 2427
AcuI CTGAAG 4 cut(s) 141, 927, 951, 1593
AcvI CACGTG 1 cut(s) 1850
AcyI GRCGYC 1 cut(s) 2768
AfaI GTAC 5 cut(s) 793, 1430, 2070, 2366, 3053
AfeI AGCGCT 2 cut(s) 192, 1009
AfiI CCNNNNNNNGG 4 cut(s) 114, 219, 1124, 1438
AflIII ACRYGT 1 cut(s) 2823
AjnI CCWGG 5 cut(s) 69, 1117, 1683, 2081, 2929
AjuI GAANNNNNNNTTGG 4 cut(s) 11, 43, 1107, 1139
AleI CACNNNNGTG 1 cut(s) 995
AlwI GGATC 3 cut(s) 194, 1024, 2019
AlwNI CAGNNNCTG 1 cut(s) 761
Ama87I CYCGRG 2 cut(s) 113, 954
Aor51HI AGCGCT 2 cut(s) 192, 1009
AoxI GGCC 5 cut(s) 167, 1839, 2084, 2190, 2401
ApoI RAATTY 3 cut(s) 97, 1174, 2427
ArsI GACNNNNNNTTYG 2 cut(s) 572, 604
Asp700I GAANNNNTTC 3 cut(s) 98, 2427, 2850
AspA2I CCTAGG 1 cut(s) 2650
AspLEI GCGC 3 cut(s) 56, 193, 1010
AsuC2I CCSGG 1 cut(s) 2000
AsuHPI GGTGA 9 cut(s) 294, 315, 785, 1009, 1267, 1589, 2239, 2819, 3005
AsuII TTCGAA 2 cut(s) 1495, 1650
AsuNHI GCTAGC 1 cut(s) 2642
AvaI CYCGRG 2 cut(s) 113, 954
AvrII CCTAGG 1 cut(s) 2650
AxyI CCTNAGG 2 cut(s) 288, 366
BaeI ACNNNNGTAYC 2 cut(s) 2052, 2085
BanII GRGCYC 1 cut(s) 1636
BarI GAAGNNNNNNTAC 2 cut(s) 3035, 3067
BauI CACGAG 1 cut(s) 2547
BbrPI CACGTG 1 cut(s) 1850
BbsI GAAGAC 4 cut(s) 261, 702, 1065, 1992
BbvCI CCTCAGC 1 cut(s) 2208
BccI CCATC 5 cut(s) 458, 976, 1270, 1440, 2983
BceAI ACGGC 1 cut(s) 2388
BcgI CGANNNNNNTGC 2 cut(s) 1832, 1866
BciT130I CCWGG 5 cut(s) 71, 1119, 1685, 2083, 2931
BclI TGATCA 3 cut(s) 817, 2058, 2572
BcnI CCSGG 1 cut(s) 2000
BfaI CTAG 9 cut(s) 1038, 1877, 1919, 1956, 2523, 2643, 2651, 2772, 2948
BfmI CTRYAG 8 cut(s) 177, 447, 567, 1731, 1745, 1755, 2177, 2492
BfoI RGCGCY 3 cut(s) 57, 194, 1011
BglI GCCNNNNNGGC 1 cut(s) 854
BglII AGATCT 1 cut(s) 1868
BlnI CCTAGG 1 cut(s) 2650
BlpI GCTNAGC 1 cut(s) 2943
Bme1390I CCNGG 6 cut(s) 71, 1119, 1685, 2000, 2083, 2931
BmeT110I CYCGRG 2 cut(s) 113, 954
BmiI GGNNCC 5 cut(s) 279, 351, 390, 423, 1116
BmrFI CCNGG 6 cut(s) 71, 1119, 1685, 2000, 2083, 2931
BmtI GCTAGC 1 cut(s) 2646
BoxI GACNNNNGTC 1 cut(s) 1186
BpiI GAAGAC 4 cut(s) 261, 702, 1065, 1992
BplI GAGNNNNNCTC 2 cut(s) 937, 969
BpmI CTGGAG 5 cut(s) 53, 915, 1667, 3002, 3032
Bpu10I CCTNAGC 4 cut(s) 513, 1311, 1899, 2208
Bpu1102I GCTNAGC 1 cut(s) 2943
Bpu14I TTCGAA 2 cut(s) 1495, 1650
BpuEI CTTGAG 6 cut(s) 672, 729, 1545, 1590, 2291, 2379
BpuMI CCSGG 1 cut(s) 2000
BsaAI YACGTR 1 cut(s) 1850
BsaBI GATNNNNATC 1 cut(s) 552
BsaHI GRCGYC 1 cut(s) 2768
BsaI GGTCTC 2 cut(s) 1619, 2166
BsaJI CCNNGG 6 cut(s) 112, 534, 1821, 1842, 2650, 2841
BsaXI ACNNNNNCTCC 4 cut(s) 1200, 1230, 2728, 2758
Bsc4I CCNNNNNNNGG 4 cut(s) 114, 219, 1124, 1438
Bse118I RCCGGY 1 cut(s) 50
Bse1I ACTGG 3 cut(s) 632, 1395, 2985
Bse21I CCTNAGG 2 cut(s) 288, 366
Bse3DI GCAATG 3 cut(s) 1286, 1842, 2115
Bse8I GATNNNNATC 1 cut(s) 552
BseBI CCWGG 5 cut(s) 71, 1119, 1685, 2083, 2931
BseDI CCNNGG 6 cut(s) 112, 534, 1821, 1842, 2650, 2841
BseGI GGATG 7 cut(s) 241, 469, 850, 1072, 1105, 1552, 2837
BseJI GATNNNNATC 1 cut(s) 552
BseLI CCNNNNNNNGG 4 cut(s) 114, 219, 1124, 1438
BseMI GCAATG 3 cut(s) 1286, 1842, 2115
BseNI ACTGG 3 cut(s) 632, 1395, 2985
BseRI GAGGAG 5 cut(s) 1439, 2731, 2885, 2977, 3020
BseYI CCCAGC 1 cut(s) 2726
BsgI GTGCAG 3 cut(s) 785, 1512, 2961
Bsh1236I CGCG 1 cut(s) 2856
Bsh1285I CGRYCG 1 cut(s) 2225
BshFI GGCC 5 cut(s) 169, 1841, 2086, 2192, 2403
BsiEI CGRYCG 1 cut(s) 2225
BsiHKCI CYCGRG 2 cut(s) 113, 954
BsiSI CCGG 2 cut(s) 51, 1999
BslFI GGGAC 4 cut(s) 732, 1499, 1733, 2015
BslI CCNNNNNNNGG 4 cut(s) 114, 219, 1124, 1438
BsmBI CGTCTC 1 cut(s) 1887
BsmFI GGGAC 4 cut(s) 732, 1499, 1733, 2015
BsmI GAATGC 2 cut(s) 844, 2968
BsnI GGCC 5 cut(s) 169, 1841, 2086, 2192, 2403
Bso31I GGTCTC 2 cut(s) 1619, 2166
BsoBI CYCGRG 2 cut(s) 113, 954
Bsp119I TTCGAA 2 cut(s) 1495, 1650
Bsp1286I GDGCHC 1 cut(s) 1636
Bsp1407I TGTACA 1 cut(s) 3051
Bsp1720I GCTNAGC 1 cut(s) 2943
Bsp19I CCATGG 1 cut(s) 2841
Bsp68I TCGCGA 1 cut(s) 2856
BspACI CCGC 7 cut(s) 108, 144, 842, 1420, 2041, 2912, 3026
BspANI GGCC 5 cut(s) 169, 1841, 2086, 2192, 2403
BspFNI CGCG 1 cut(s) 2856
BspHI TCATGA 1 cut(s) 1341
BspLI GGNNCC 5 cut(s) 279, 351, 390, 423, 1116
BspMAI CTGCAG 3 cut(s) 451, 571, 1749
BspOI GCTAGC 1 cut(s) 2646
BspPI GGATC 3 cut(s) 194, 1024, 2019
BspQI GCTCTTC 2 cut(s) 1575, 2753
BspT104I TTCGAA 2 cut(s) 1495, 1650
BspTNI GGTCTC 2 cut(s) 1619, 2166
BsrBI CCGCTC 2 cut(s) 2041, 2912
BsrDI GCAATG 3 cut(s) 1286, 1842, 2115
BsrFI RCCGGY 1 cut(s) 50
BsrGI TGTACA 1 cut(s) 3051
BsrI ACTGG 3 cut(s) 632, 1395, 2985
BssAI RCCGGY 1 cut(s) 50
BssECI CCNNGG 6 cut(s) 112, 534, 1821, 1842, 2650, 2841
BssNI GRCGYC 1 cut(s) 2768
BssSI CACGAG 1 cut(s) 2547
BssT1I CCWWGG 3 cut(s) 1821, 2650, 2841
Bst2BI CACGAG 1 cut(s) 2547
Bst2UI CCWGG 5 cut(s) 71, 1119, 1685, 2083, 2931
Bst4CI ACNGT 6 cut(s) 244, 753, 806, 1369, 2566, 2895
Bst6I CTCTTC 8 cut(s) 117, 1201, 1379, 1575, 1650, 1686, 2094, 2753
BstACI GRCGYC 1 cut(s) 2768
BstAUI TGTACA 1 cut(s) 3051
BstBAI YACGTR 1 cut(s) 1850
BstBI TTCGAA 2 cut(s) 1495, 1650
BstC8I GCNNGC 5 cut(s) 52, 950, 1971, 2644, 2920
BstDSI CCRYGG 1 cut(s) 2841
BstF5I GGATG 7 cut(s) 241, 469, 850, 1072, 1105, 1552, 2837
BstFNI CGCG 1 cut(s) 2856
BstH2I RGCGCY 3 cut(s) 57, 194, 1011
BstHHI GCGC 3 cut(s) 56, 193, 1010
BstMCI CGRYCG 1 cut(s) 2225
BstNI CCWGG 5 cut(s) 71, 1119, 1685, 2083, 2931
BstNSI RCATGY 3 cut(s) 1993, 2827, 2926
BstPAI GACNNNNGTC 1 cut(s) 1186
BstSCI CCNGG 6 cut(s) 69, 1117, 1683, 1998, 2081, 2929
BstSFI CTRYAG 8 cut(s) 177, 447, 567, 1731, 1745, 1755, 2177, 2492
BstUI CGCG 1 cut(s) 2856
BstV2I GAAGAC 4 cut(s) 261, 702, 1065, 1992
BstX2I RGATCY 2 cut(s) 1868, 2011
BstYI RGATCY 2 cut(s) 1868, 2011
Bsu36I CCTNAGG 2 cut(s) 288, 366
BsuRI GGCC 5 cut(s) 169, 1841, 2086, 2192, 2403
BtgI CCRYGG 1 cut(s) 2841
BtgZI GCGATG 1 cut(s) 2059
BtsCI GGATG 7 cut(s) 241, 469, 850, 1072, 1105, 1552, 2837
BtuMI TCGCGA 1 cut(s) 2856
Cac8I GCNNGC 5 cut(s) 52, 950, 1971, 2644, 2920
CaiI CAGNNNCTG 1 cut(s) 761
CciI TCATGA 1 cut(s) 1341
CfoI GCGC 3 cut(s) 56, 193, 1010
Cfr10I RCCGGY 1 cut(s) 50
CseI GACGC 4 cut(s) 67, 1835, 1904, 2776
Csp6I GTAC 5 cut(s) 792, 1429, 2069, 2365, 3052
CviQI GTAC 5 cut(s) 792, 1429, 2069, 2365, 3052
DraI TTTAAA 1 cut(s) 1981
EaeI YGGCCR 1 cut(s) 1839
Eam1104I CTCTTC 8 cut(s) 117, 1201, 1379, 1575, 1650, 1686, 2094, 2753
EarI CTCTTC 8 cut(s) 117, 1201, 1379, 1575, 1650, 1686, 2094, 2753
EciI GGCGGA 1 cut(s) 133
Eco130I CCWWGG 3 cut(s) 1821, 2650, 2841
Eco147I AGGCCT 1 cut(s) 2086
Eco24I GRGCYC 1 cut(s) 1636
Eco31I GGTCTC 2 cut(s) 1619, 2166
Eco32I GATATC 1 cut(s) 339
Eco47III AGCGCT 2 cut(s) 192, 1009
Eco57I CTGAAG 4 cut(s) 141, 927, 951, 1593
Eco72I CACGTG 1 cut(s) 1850
Eco81I CCTNAGG 2 cut(s) 288, 366
Eco88I CYCGRG 2 cut(s) 113, 954
EcoRI GAATTC 1 cut(s) 1174
EcoRII CCWGG 5 cut(s) 69, 1117, 1683, 2081, 2929
EcoRV GATATC 1 cut(s) 339
EcoT14I CCWWGG 3 cut(s) 1821, 2650, 2841
EcoT38I GRGCYC 1 cut(s) 1636
ErhI CCWWGG 3 cut(s) 1821, 2650, 2841
Esp3I CGTCTC 1 cut(s) 1887
FalI AAGNNNNNCTT 4 cut(s) 1977, 2009, 2775, 2807
FaqI GGGAC 4 cut(s) 732, 1499, 1733, 2015
FauI CCCGC 1 cut(s) 1413
FbaI TGATCA 3 cut(s) 817, 2058, 2572
FblI GTMKAC 1 cut(s) 3036
FokI GGATG 7 cut(s) 248, 476, 857, 1079, 1112, 1559, 2824
FriOI GRGCYC 1 cut(s) 1636
FspBI CTAG 9 cut(s) 1038, 1877, 1919, 1956, 2523, 2643, 2651, 2772, 2948
GlaI GCGC 3 cut(s) 55, 192, 1009
GsaI CCCAGC 1 cut(s) 2730
GsuI CTGGAG 5 cut(s) 53, 915, 1667, 3002, 3032
HaeII RGCGCY 3 cut(s) 57, 194, 1011
HaeIII GGCC 5 cut(s) 169, 1841, 2086, 2192, 2403
HapII CCGG 2 cut(s) 51, 1999
HgaI GACGC 4 cut(s) 67, 1835, 1904, 2776
HhaI GCGC 3 cut(s) 56, 193, 1010
Hin1I GRCGYC 1 cut(s) 2768
Hin6I GCGC 3 cut(s) 54, 191, 1008
HinP1I GCGC 3 cut(s) 54, 191, 1008
HincII GTYRAC 1 cut(s) 454
HindII GTYRAC 1 cut(s) 454
HindIII AAGCTT 5 cut(s) 134, 153, 2139, 2617, 2784
HpaII CCGG 2 cut(s) 51, 1999
HphI GGTGA 9 cut(s) 294, 315, 785, 1009, 1267, 1589, 2239, 2819, 3005
Hpy166II GTNNAC 8 cut(s) 454, 1465, 2435, 2810, 2996, 3037, 3067, 3079
Hpy8I GTNNAC 8 cut(s) 454, 1465, 2435, 2810, 2996, 3037, 3067, 3079
HpyCH4III ACNGT 6 cut(s) 244, 753, 806, 1369, 2566, 2895
HpyCH4IV ACGT 6 cut(s) 528, 1168, 1849, 2004, 2023, 2265
HpySE526I ACGT 6 cut(s) 528, 1168, 1849, 2004, 2023, 2265
Hsp92I GRCGYC 1 cut(s) 2768
HspAI GCGC 3 cut(s) 54, 191, 1008
KroI GCCGGC 1 cut(s) 50
KroNI GCCGGC 1 cut(s) 52
Ksp22I TGATCA 3 cut(s) 817, 2058, 2572
LguI GCTCTTC 2 cut(s) 1575, 2753
MaeI CTAG 9 cut(s) 1038, 1877, 1919, 1956, 2523, 2643, 2651, 2772, 2948
MaeII ACGT 6 cut(s) 528, 1168, 1849, 2004, 2023, 2265
MaeIII GTNAC 8 cut(s) 493, 810, 883, 997, 1740, 2460, 2904, 2925
MbiI CCGCTC 2 cut(s) 2041, 2912
MflI RGATCY 2 cut(s) 1868, 2011
MhlI GDGCHC 1 cut(s) 1636
MmeI TCCRAC 3 cut(s) 1254, 2508, 3088
MreI CGCCGGCG 1 cut(s) 50
MroNI GCCGGC 1 cut(s) 50
MroXI GAANNNNTTC 3 cut(s) 98, 2427, 2850
MseI TTAA 5 cut(s) 765, 1361, 1980, 2262, 2312
MslI CAYNNNNRTG 4 cut(s) 819, 825, 837, 995
MspA1I CMGCKG 3 cut(s) 1526, 2150, 2348
MspI CCGG 2 cut(s) 51, 1999
MspR9I CCNGG 6 cut(s) 71, 1119, 1685, 2000, 2083, 2931
Mva1269I GAATGC 2 cut(s) 844, 2968
MvaI CCWGG 5 cut(s) 71, 1119, 1685, 2083, 2931
MvnI CGCG 1 cut(s) 2856
NaeI GCCGGC 1 cut(s) 52
NciI CCSGG 1 cut(s) 2000
NcoI CCATGG 1 cut(s) 2841
NgoMIV GCCGGC 1 cut(s) 50
NheI GCTAGC 1 cut(s) 2642
NlaIV GGNNCC 5 cut(s) 279, 351, 390, 423, 1116
NmeAIII GCCGAG 3 cut(s) 559, 1867, 2323
NmuCI GTSAC 3 cut(s) 810, 883, 997
NruI TCGCGA 1 cut(s) 2856
NspI RCATGY 3 cut(s) 1993, 2827, 2926
NspV TTCGAA 2 cut(s) 1495, 1650
OliI CACNNNNGTG 1 cut(s) 995
PaeR7I CTCGAG 1 cut(s) 954
PagI TCATGA 1 cut(s) 1341
PceI AGGCCT 1 cut(s) 2086
PciI ACATGT 1 cut(s) 2823
PciSI GCTCTTC 2 cut(s) 1575, 2753
PctI GAATGC 2 cut(s) 844, 2968
PdiI GCCGGC 1 cut(s) 52
PdmI GAANNNNTTC 3 cut(s) 98, 2427, 2850
PfeI GAWTC 9 cut(s) 140, 248, 317, 395, 737, 935, 2075, 2846, 2858
PflFI GACNNNGTC 1 cut(s) 586
PfoI TCCNGGA 1 cut(s) 69
Ple19I CGATCG 1 cut(s) 2225
PmaCI CACGTG 1 cut(s) 1850
PmlI CACGTG 1 cut(s) 1850
Ppu21I YACGTR 1 cut(s) 1850
PscI ACATGT 1 cut(s) 2823
PshAI GACNNNNGTC 1 cut(s) 1186
Psp1406I AACGTT 2 cut(s) 2023, 2265
Psp6I CCWGG 5 cut(s) 69, 1117, 1683, 2081, 2929
PspCI CACGTG 1 cut(s) 1850
PspFI CCCAGC 1 cut(s) 2726
PspGI CCWGG 5 cut(s) 69, 1117, 1683, 2081, 2929
PspN4I GGNNCC 5 cut(s) 279, 351, 390, 423, 1116
PstI CTGCAG 3 cut(s) 451, 571, 1749
PstNI CAGNNNCTG 1 cut(s) 761
PsuI RGATCY 2 cut(s) 1868, 2011
PsyI GACNNNGTC 1 cut(s) 586
PvuI CGATCG 1 cut(s) 2225
PvuII CAGCTG 3 cut(s) 1526, 2150, 2348
RruI TCGCGA 1 cut(s) 2856
RsaI GTAC 5 cut(s) 793, 1430, 2070, 2366, 3053
RsaNI GTAC 5 cut(s) 792, 1429, 2069, 2365, 3052
RseI CAYNNNNRTG 4 cut(s) 819, 825, 837, 995
SapI GCTCTTC 2 cut(s) 1575, 2753
SaqAI TTAA 5 cut(s) 765, 1361, 1980, 2262, 2312
ScrFI CCNGG 6 cut(s) 71, 1119, 1685, 2000, 2083, 2931
SduI GDGCHC 1 cut(s) 1636
SfcI CTRYAG 8 cut(s) 177, 447, 567, 1731, 1745, 1755, 2177, 2492
Sfr274I CTCGAG 1 cut(s) 954
SfuI TTCGAA 2 cut(s) 1495, 1650
SgrAI CRCCGGYG 1 cut(s) 50
SlaI CTCGAG 1 cut(s) 954
SmiMI CAYNNNNRTG 4 cut(s) 819, 825, 837, 995
SmlI CTYRAG 7 cut(s) 687, 744, 954, 1560, 1605, 2270, 2394
SmoI CTYRAG 7 cut(s) 687, 744, 954, 1560, 1605, 2270, 2394
SseBI AGGCCT 1 cut(s) 2086
SsiI CCGC 7 cut(s) 108, 144, 842, 1420, 2041, 2912, 3026
SspMI CTAG 9 cut(s) 1038, 1877, 1919, 1956, 2523, 2643, 2651, 2772, 2948
StuI AGGCCT 1 cut(s) 2086
StyD4I CCNGG 6 cut(s) 69, 1117, 1683, 1998, 2081, 2929
StyI CCWWGG 3 cut(s) 1821, 2650, 2841
TaaI ACNGT 6 cut(s) 244, 753, 806, 1369, 2566, 2895
TaiI ACGT 6 cut(s) 531, 1171, 1852, 2007, 2026, 2268
TatI WGTACW 1 cut(s) 3051
TauI GCSGC 1 cut(s) 2044
TfiI GAWTC 9 cut(s) 140, 248, 317, 395, 737, 935, 2075, 2846, 2858
Tru1I TTAA 5 cut(s) 765, 1361, 1980, 2262, 2312
Tru9I TTAA 5 cut(s) 765, 1361, 1980, 2262, 2312
TseFI GTSAC 3 cut(s) 810, 883, 997
Tsp45I GTSAC 3 cut(s) 810, 883, 997
TspGWI ACGGA 2 cut(s) 973, 2543
Tth111I GACNNNGTC 1 cut(s) 586
XapI RAATTY 3 cut(s) 97, 1174, 2427
XceI RCATGY 3 cut(s) 1993, 2827, 2926
XhoI CTCGAG 1 cut(s) 954
XmaJI CCTAGG 1 cut(s) 2650
XmiI GTMKAC 1 cut(s) 3036
XmnI GAANNNNTTC 3 cut(s) 98, 2427, 2850
XspI CTAG 9 cut(s) 1038, 1877, 1919, 1956, 2523, 2643, 2651, 2772, 2948
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.