Rw2G033050

Golgin candidate

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
54196149 .. 54205017
8869 bp
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UTR
Exon/CDS
Intron
Rw2G033050.1

Sequence Viewer

Length: 3162 bp
ATGGCGTGGTTCAGTGGGAAAGTCTCGTTGGGGAACTTCCCCGATCTCGCCGGCGCTGTAAATAAGCTCCAGGAGAGCGTCAAGAACATCGAGAAGAATTTCGATACCGCCCTCGGGTTTGAAGAGAAGGAGAAGCTTGAATCCGCCAATGAAGCTTCAGGATTATGGCCTTCATCTACAGAAAGAAAAGCGCTATTTGATCCTGTTATGTCCTTTATGGGGCAAAAGAATGAGGATGACACTGTTGAATCATCACAGAAAGCTGAGTCTTCTGAGGCTCCACCACCTAAGGTTGAGAAATCACCAGCAGAGATTGAATCTTCACCAAAGGTTGAGATATCATCAGTGGAGCCTAAATCTCCACCTAAGGTTGAGAAATCGTCAGTGGAGCCTGAATCTCTACCTAAGGTTGAGAAATCATCAGTGGAGCCTGAATCTTCACCTAAGGTTGAGAAATCATCAGTGGAGCCTGAACCTCCACAATGTTCATCTGCAGTTGACGAAAAGGATGGGGCAAGTGAAACATTACCACATTCTGTAACTGAACAGACTGCTGCTAAGGAGGAAAATGACGTTGCCGAGGAAAAAAAAGATGAAAATCATGCTGAGACTGCAGAAGAAACAAAGACTTTGTCATTAGAGCCTGAGAGATCAGAGTCTCAATCGCCCTCAGTGCCAGTTGGGGCAACTGAGCCTACCATGAGTGCCTCATCGTCAGATTTTGTTGGTTCTCAAGAAGAAGAAAATAAGATTTCAGTAGGGGGACTCTCAGAACTTTCAGAATCAGCTCAAGGACTGTCAGGAGCTGTTAATGTAGGTGAAGTAGAGGTGGGTGGTACTGCTCTGCACAGTGAGTCACATGATCATGCTGATGTGCATGAGAATGCGGATGCCCAGAAGGCACACAAAGAGAATGATAATGAAATTGTGACTCAGGCTGGAGATATTGCTGAAGTGGTTTCTATGGTCGAACCTGAAGAATCAACTGAGAGCCTGCCTCGAGATGTTGAGCCATCTGCTATTCACTCCATTTCCACTGAGGTGACTCATAGCGCTGGTGGATCTCCTACCAACCAATTACGTAGTGTTAATGCTTCCAATGAGGCTTCGGATGTGTCTTCCGAGTTAGTTTTCAAACAAAAGGATGCTATCATTGAGGAACCTGGAATTGGTCATCGAGTTGATGAGAATGAAACCAACTATAATGAGCAACGTCTGAGCTCAGGACAAAAGTCAGACTCTTCATACACAGGAGCAAATGTCTCTGATGCTTCCAACGCTTTGCTTGAATTAGAGAAGGTGAAGAAGGAGATGAAAATGATGGAAGCTGCATTGCAAGGTGCTGCAAGACAGGCTCAGGCAAAAGCTGATGAAATTGCCAAGTTCATGAACGAAAATGAGCAATTAAAAACTGTGGTTGAGGATTTGAAGAGAAAATCCAGTGAAGCAGAAGTTGAGTCTCTGCGGGAGGAGTACCATCAAAGGGTTGCAACACTTGAAAGGAAGGTTTACGCTCTTACTAAGGAAAGGGACACGCTTCGAAGGGAGCAGAATAAGAAAAGTGATGCAGCTGCACTTTTGAAGGAAAAGGATGAAATAATTACTCAAGTTATGGCTGAAGGTGAAGAGCTTTCAAAAAAACAGGCTACTCAAGAAGGTCTCATTAGGAAACTAAGGGCTCAGATTAGAGAGTTCGAAGAAGAGAAGAAAGGGCTGACTACCAAGCTCCAGGTAGAAGAGAATAAAGTAGAGAGTATCAAGAGGGACAAGACAGCTACAGAAAAGTTGCTGCAGGAAACTATAGAAAAGCACCAAACAGAACTTGCAGCACAGAAAGAGTATTATACTAATGCTTTGGCTGCTGCCAAGGAGGCAGAAGCAATGGCCGAGGCACGTGCTAACAATGAAGCCAGATCTGAACTAGAGAGTCGTCTAAGAGACGCTCAGGAGCGTGAAGCTATGCTAGTTCAGGCACTCGAAGAATTACGACAAACTCTAACTAGAACAGAACAGCAGGCAGTATTTAAAGAAGACATGCTTCGCCGGGACGTTGAGGATCTTCAAAAACGTTATCAAGCAAGTGAGCGGCGATGTGAGGAGTTGATCACGCAAGTACCAGAATCTACCAGGCCTCTTCTTAGGCAAATCGAAGCAATGCAGGAAACAACTTCCAGAAGGGCAGAAGCTTGGGCAGCTGTTGAGAGGTCTCTTACCAATCGACTACAGGAAGCAGAGGCCAAAGCTGCTGCTGCTGAGGAAAGAGAGCGATCGGTGAATGAACGCTTGTCTCAAACCTTATCTCGTATTAACGTTCTTGAGGCTCAGATTTCATGTCTTAGAGCCGAGCAATCCCAATTAAGTAAGTCTCTTGAAAAGGAGAGACAAAGAGCAGCTGAAAATAGGCAGGAGTACCTTGCTGCAAAGGAAGAAGCTGATACTCAAGAAGGCCGTGCAAACCAGCTTGAAGAAGAAATTCGTGAACTCAGGCGAAAACATAAGCAGGAGTTACAAGATGCTTTGATGCACAGGGAACTGCTACAGCAGGAGGTAGAAAGGGAGAAAGCTGCTAGGTTGGATTTGGAAAGGACATCTCGTGTCCGTTCTGCTACTGTATCTGATCAGACAACTATAACAAGGCAGAGTTCTGCTTTTGAGAATGGAAGCTTGAACCGGAAACTTTCAAGTGCTAGCTGCCTAGGGAGCATGGAGGAAAGCTATTTTCTACAAGCATCTCTGGACTCGTCTGATAGTTTCTCTGAGAGGAGAAATGCTGGGGAAGCAACCATGACTCCATACTATATGAAGAGCATGACGCCTAGTGCTTTTGAAGCTTCCCTTCGTCAGAAGGAGGGTGAACTTGCATCTTACATGTCTCGTTTGGCATCCATGGAATCTATTCGCGATTCTCTCGCAGAGGAGTTGGTCAAAATGACAGAACAGTGTGAAAAGTTACGAGCAGAGGCTGGCATGTTACCTGGCATCAGAGCAGAGCTAGATGCACTAAGGAGGAGGCATTCTGCTGCACTGGAGCTGATGGGTGAACGAGATGAGGAGCTGGAGGAACTTCGTGCAGATATTGTAGACTTGAAGGAGATGTACAGAGAGCAAGTAAACTTGCTTGTGAACAAGATACAGATAATGAGTTCAGCAGTTGGAAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1053

Amino Acids

117.36

Weight (kDa)

4.85

Isoelectric Point (pI)

63.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TMF_DNA_bd PF12329 522 - 593 5.1e-14 TATA element modulatory factor 1 DNA binding
TMF_TATA_bd PF12325 937 - 1039 6.2e-28 TATA element modulatory factor 1 TATA binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 2086
AccI GTMKAC 1 cut(s) 3081
AccII CGCG 1 cut(s) 2901
AciI CCGC 5 cut(s) 108, 144, 887, 1465, 2086
AclI AACGTT 2 cut(s) 2068, 2310
AclWI GGATC 3 cut(s) 194, 1069, 2064
AcoI YGGCCR 1 cut(s) 1884
AcsI RAATTY 2 cut(s) 97, 2472
AcuI CTGAAG 4 cut(s) 141, 972, 996, 1638
AcvI CACGTG 1 cut(s) 1895
AcyI GRCGYC 1 cut(s) 2813
AfaI GTAC 5 cut(s) 838, 1475, 2115, 2411, 3098
AfeI AGCGCT 2 cut(s) 192, 1054
AfiI CCNNNNNNNGG 4 cut(s) 114, 219, 1169, 1483
AflIII ACRYGT 1 cut(s) 2868
AjnI CCWGG 5 cut(s) 69, 1162, 1728, 2126, 2974
AjuI GAANNNNNNNTTGG 4 cut(s) 11, 43, 1152, 1184
AleI CACNNNNGTG 1 cut(s) 1040
Alw21I GWGCWC 1 cut(s) 1223
AlwI GGATC 3 cut(s) 194, 1069, 2064
AlwNI CAGNNNCTG 2 cut(s) 806, 2963
Ama87I CYCGRG 2 cut(s) 113, 999
Aor51HI AGCGCT 2 cut(s) 192, 1054
AoxI GGCC 5 cut(s) 167, 1884, 2129, 2235, 2446
ApoI RAATTY 2 cut(s) 97, 2472
ArsI GACNNNNNNTTYG 2 cut(s) 617, 649
Asp700I GAANNNNTTC 3 cut(s) 98, 2472, 2895
AspA2I CCTAGG 1 cut(s) 2695
AspLEI GCGC 3 cut(s) 56, 193, 1055
AsuC2I CCSGG 1 cut(s) 2045
AsuII TTCGAA 2 cut(s) 1540, 1695
AsuNHI GCTAGC 1 cut(s) 2687
AvaI CYCGRG 2 cut(s) 113, 999
AvrII CCTAGG 1 cut(s) 2695
AxyI CCTNAGG 4 cut(s) 288, 366, 405, 444
BaeI ACNNNNGTAYC 2 cut(s) 2097, 2130
BanII GRGCYC 2 cut(s) 1223, 1681
BarI GAAGNNNNNNTAC 2 cut(s) 3080, 3112
BauI CACGAG 1 cut(s) 2592
BbrPI CACGTG 1 cut(s) 1895
BbsI GAAGAC 3 cut(s) 261, 1110, 2037
Bbv12I GWGCWC 1 cut(s) 1223
BbvCI CCTCAGC 1 cut(s) 2253
BccI CCATC 5 cut(s) 503, 1021, 1315, 1485, 3028
BceAI ACGGC 1 cut(s) 2433
BcgI CGANNNNNNTGC 2 cut(s) 1877, 1911
BciT130I CCWGG 5 cut(s) 71, 1164, 1730, 2128, 2976
BclI TGATCA 3 cut(s) 862, 2103, 2617
BcnI CCSGG 1 cut(s) 2045
BfaI CTAG 8 cut(s) 1922, 1964, 2001, 2568, 2688, 2696, 2817, 2993
BfmI CTRYAG 8 cut(s) 177, 492, 612, 1776, 1790, 1800, 2222, 2537
BfoI RGCGCY 3 cut(s) 57, 194, 1056
BglI GCCNNNNNGGC 2 cut(s) 899, 1871
BglII AGATCT 1 cut(s) 1913
BlnI CCTAGG 1 cut(s) 2695
Bme1390I CCNGG 6 cut(s) 71, 1164, 1730, 2045, 2128, 2976
BmeT110I CYCGRG 2 cut(s) 113, 999
BmiI GGNNCC 6 cut(s) 279, 351, 390, 429, 468, 1161
BmrFI CCNGG 6 cut(s) 71, 1164, 1730, 2045, 2128, 2976
BmtI GCTAGC 1 cut(s) 2691
BoxI GACNNNNGTC 1 cut(s) 1231
BpiI GAAGAC 3 cut(s) 261, 1110, 2037
BplI GAGNNNNNCTC 2 cut(s) 982, 1014
BpmI CTGGAG 5 cut(s) 53, 960, 1712, 3047, 3077
Bpu10I CCTNAGC 5 cut(s) 558, 1222, 1356, 1944, 2253
Bpu14I TTCGAA 2 cut(s) 1540, 1695
BpuEI CTTGAG 6 cut(s) 717, 774, 1590, 1635, 2336, 2424
BpuMI CCSGG 1 cut(s) 2045
BsaAI YACGTR 2 cut(s) 1082, 1895
BsaBI GATNNNNATC 1 cut(s) 597
BsaHI GRCGYC 1 cut(s) 2813
BsaI GGTCTC 2 cut(s) 1664, 2211
BsaJI CCNNGG 6 cut(s) 112, 579, 1866, 1887, 2695, 2886
BsaWI WCCGGW 1 cut(s) 2670
BsaXI ACNNNNNCTCC 4 cut(s) 1245, 1275, 2773, 2803
Bsc4I CCNNNNNNNGG 4 cut(s) 114, 219, 1169, 1483
Bse118I RCCGGY 1 cut(s) 50
Bse1I ACTGG 3 cut(s) 677, 1440, 3030
Bse21I CCTNAGG 4 cut(s) 288, 366, 405, 444
Bse3DI GCAATG 3 cut(s) 1331, 1887, 2160
Bse8I GATNNNNATC 1 cut(s) 597
BseBI CCWGG 5 cut(s) 71, 1164, 1730, 2128, 2976
BseDI CCNNGG 6 cut(s) 112, 579, 1866, 1887, 2695, 2886
BseGI GGATG 7 cut(s) 241, 514, 895, 1117, 1150, 1597, 2882
BseJI GATNNNNATC 1 cut(s) 597
BseLI CCNNNNNNNGG 4 cut(s) 114, 219, 1169, 1483
BseMI GCAATG 3 cut(s) 1331, 1887, 2160
BseNI ACTGG 3 cut(s) 677, 1440, 3030
BseRI GAGGAG 6 cut(s) 1484, 2111, 2776, 2930, 3022, 3065
BseYI CCCAGC 1 cut(s) 2771
BsgI GTGCAG 4 cut(s) 830, 1557, 3006, 3090
Bsh1236I CGCG 1 cut(s) 2901
Bsh1285I CGRYCG 1 cut(s) 2270
BshFI GGCC 5 cut(s) 169, 1886, 2131, 2237, 2448
BsiEI CGRYCG 1 cut(s) 2270
BsiHKAI GWGCWC 1 cut(s) 1223
BsiHKCI CYCGRG 2 cut(s) 113, 999
BsiSI CCGG 3 cut(s) 51, 2044, 2671
BslFI GGGAC 4 cut(s) 777, 1544, 1778, 2060
BslI CCNNNNNNNGG 4 cut(s) 114, 219, 1169, 1483
BsmBI CGTCTC 1 cut(s) 1932
BsmFI GGGAC 4 cut(s) 777, 1544, 1778, 2060
BsmI GAATGC 2 cut(s) 889, 3013
BsnI GGCC 5 cut(s) 169, 1886, 2131, 2237, 2448
Bso31I GGTCTC 2 cut(s) 1664, 2211
BsoBI CYCGRG 2 cut(s) 113, 999
Bsp119I TTCGAA 2 cut(s) 1540, 1695
Bsp1286I GDGCHC 2 cut(s) 1223, 1681
Bsp1407I TGTACA 1 cut(s) 3096
Bsp19I CCATGG 1 cut(s) 2886
Bsp68I TCGCGA 1 cut(s) 2901
BspACI CCGC 5 cut(s) 108, 144, 887, 1465, 2086
BspANI GGCC 5 cut(s) 169, 1886, 2131, 2237, 2448
BspFNI CGCG 1 cut(s) 2901
BspHI TCATGA 1 cut(s) 1386
BspLI GGNNCC 6 cut(s) 279, 351, 390, 429, 468, 1161
BspMAI CTGCAG 3 cut(s) 496, 616, 1794
BspOI GCTAGC 1 cut(s) 2691
BspPI GGATC 3 cut(s) 194, 1069, 2064
BspQI GCTCTTC 2 cut(s) 1620, 2798
BspT104I TTCGAA 2 cut(s) 1540, 1695
BspTNI GGTCTC 2 cut(s) 1664, 2211
BsrBI CCGCTC 1 cut(s) 2086
BsrDI GCAATG 3 cut(s) 1331, 1887, 2160
BsrFI RCCGGY 1 cut(s) 50
BsrGI TGTACA 1 cut(s) 3096
BsrI ACTGG 3 cut(s) 677, 1440, 3030
BssAI RCCGGY 1 cut(s) 50
BssECI CCNNGG 6 cut(s) 112, 579, 1866, 1887, 2695, 2886
BssNI GRCGYC 1 cut(s) 2813
BssSI CACGAG 1 cut(s) 2592
BssT1I CCWWGG 3 cut(s) 1866, 2695, 2886
Bst2BI CACGAG 1 cut(s) 2592
Bst2UI CCWGG 5 cut(s) 71, 1164, 1730, 2128, 2976
Bst4CI ACNGT 6 cut(s) 244, 798, 851, 1414, 2611, 2940
Bst6I CTCTTC 8 cut(s) 117, 1246, 1424, 1620, 1695, 1731, 2139, 2798
BstACI GRCGYC 1 cut(s) 2813
BstAUI TGTACA 1 cut(s) 3096
BstBAI YACGTR 2 cut(s) 1082, 1895
BstBI TTCGAA 2 cut(s) 1540, 1695
BstC8I GCNNGC 5 cut(s) 52, 995, 2016, 2689, 2965
BstDSI CCRYGG 1 cut(s) 2886
BstF5I GGATG 7 cut(s) 241, 514, 895, 1117, 1150, 1597, 2882
BstFNI CGCG 1 cut(s) 2901
BstH2I RGCGCY 3 cut(s) 57, 194, 1056
BstHHI GCGC 3 cut(s) 56, 193, 1055
BstMCI CGRYCG 1 cut(s) 2270
BstNI CCWGG 5 cut(s) 71, 1164, 1730, 2128, 2976
BstNSI RCATGY 3 cut(s) 2038, 2872, 2971
BstPAI GACNNNNGTC 1 cut(s) 1231
BstSCI CCNGG 6 cut(s) 69, 1162, 1728, 2043, 2126, 2974
BstSFI CTRYAG 8 cut(s) 177, 492, 612, 1776, 1790, 1800, 2222, 2537
BstSNI TACGTA 1 cut(s) 1082
BstUI CGCG 1 cut(s) 2901
BstV2I GAAGAC 3 cut(s) 261, 1110, 2037
BstX2I RGATCY 3 cut(s) 1061, 1913, 2056
BstYI RGATCY 3 cut(s) 1061, 1913, 2056
Bsu36I CCTNAGG 4 cut(s) 288, 366, 405, 444
BsuRI GGCC 5 cut(s) 169, 1886, 2131, 2237, 2448
BtgI CCRYGG 1 cut(s) 2886
BtgZI GCGATG 1 cut(s) 2104
BtsCI GGATG 7 cut(s) 241, 514, 895, 1117, 1150, 1597, 2882
BtuMI TCGCGA 1 cut(s) 2901
Cac8I GCNNGC 5 cut(s) 52, 995, 2016, 2689, 2965
CaiI CAGNNNCTG 2 cut(s) 806, 2963
CciI TCATGA 1 cut(s) 1386
CfoI GCGC 3 cut(s) 56, 193, 1055
Cfr10I RCCGGY 1 cut(s) 50
CseI GACGC 3 cut(s) 67, 1949, 2821
Csp6I GTAC 5 cut(s) 837, 1474, 2114, 2410, 3097
CviQI GTAC 5 cut(s) 837, 1474, 2114, 2410, 3097
DraI TTTAAA 1 cut(s) 2026
EaeI YGGCCR 1 cut(s) 1884
Eam1104I CTCTTC 8 cut(s) 117, 1246, 1424, 1620, 1695, 1731, 2139, 2798
EarI CTCTTC 8 cut(s) 117, 1246, 1424, 1620, 1695, 1731, 2139, 2798
EciI GGCGGA 1 cut(s) 133
Ecl136II GAGCTC 1 cut(s) 1221
Eco105I TACGTA 1 cut(s) 1082
Eco130I CCWWGG 3 cut(s) 1866, 2695, 2886
Eco147I AGGCCT 1 cut(s) 2131
Eco24I GRGCYC 2 cut(s) 1223, 1681
Eco31I GGTCTC 2 cut(s) 1664, 2211
Eco32I GATATC 1 cut(s) 339
Eco47III AGCGCT 2 cut(s) 192, 1054
Eco53kI GAGCTC 1 cut(s) 1221
Eco57I CTGAAG 4 cut(s) 141, 972, 996, 1638
Eco72I CACGTG 1 cut(s) 1895
Eco81I CCTNAGG 4 cut(s) 288, 366, 405, 444
Eco88I CYCGRG 2 cut(s) 113, 999
EcoICRI GAGCTC 1 cut(s) 1221
EcoRII CCWGG 5 cut(s) 69, 1162, 1728, 2126, 2974
EcoRV GATATC 1 cut(s) 339
EcoT14I CCWWGG 3 cut(s) 1866, 2695, 2886
EcoT38I GRGCYC 2 cut(s) 1223, 1681
ErhI CCWWGG 3 cut(s) 1866, 2695, 2886
Esp3I CGTCTC 1 cut(s) 1932
FalI AAGNNNNNCTT 4 cut(s) 2022, 2054, 2820, 2852
FaqI GGGAC 4 cut(s) 777, 1544, 1778, 2060
FauI CCCGC 1 cut(s) 1458
FbaI TGATCA 3 cut(s) 862, 2103, 2617
FblI GTMKAC 1 cut(s) 3081
FokI GGATG 7 cut(s) 248, 521, 902, 1124, 1157, 1604, 2869
FriOI GRGCYC 2 cut(s) 1223, 1681
FspBI CTAG 8 cut(s) 1922, 1964, 2001, 2568, 2688, 2696, 2817, 2993
GlaI GCGC 3 cut(s) 55, 192, 1054
GsaI CCCAGC 1 cut(s) 2775
GsuI CTGGAG 5 cut(s) 53, 960, 1712, 3047, 3077
HaeII RGCGCY 3 cut(s) 57, 194, 1056
HaeIII GGCC 5 cut(s) 169, 1886, 2131, 2237, 2448
HapII CCGG 3 cut(s) 51, 2044, 2671
HgaI GACGC 3 cut(s) 67, 1949, 2821
HhaI GCGC 3 cut(s) 56, 193, 1055
Hin1I GRCGYC 1 cut(s) 2813
Hin6I GCGC 3 cut(s) 54, 191, 1053
HinP1I GCGC 3 cut(s) 54, 191, 1053
HincII GTYRAC 1 cut(s) 499
HindII GTYRAC 1 cut(s) 499
HindIII AAGCTT 5 cut(s) 134, 153, 2184, 2662, 2829
HpaII CCGG 3 cut(s) 51, 2044, 2671
Hpy166II GTNNAC 8 cut(s) 499, 1510, 2480, 2855, 3041, 3082, 3112, 3124
Hpy8I GTNNAC 8 cut(s) 499, 1510, 2480, 2855, 3041, 3082, 3112, 3124
HpyCH4III ACNGT 6 cut(s) 244, 798, 851, 1414, 2611, 2940
HpyCH4IV ACGT 7 cut(s) 573, 1081, 1213, 1894, 2049, 2068, 2310
HpySE526I ACGT 7 cut(s) 573, 1081, 1213, 1894, 2049, 2068, 2310
Hsp92I GRCGYC 1 cut(s) 2813
HspAI GCGC 3 cut(s) 54, 191, 1053
KroI GCCGGC 1 cut(s) 50
KroNI GCCGGC 1 cut(s) 52
Ksp22I TGATCA 3 cut(s) 862, 2103, 2617
LguI GCTCTTC 2 cut(s) 1620, 2798
MaeI CTAG 8 cut(s) 1922, 1964, 2001, 2568, 2688, 2696, 2817, 2993
MaeII ACGT 7 cut(s) 573, 1081, 1213, 1894, 2049, 2068, 2310
MaeIII GTNAC 7 cut(s) 538, 855, 928, 1042, 2505, 2949, 2970
MbiI CCGCTC 1 cut(s) 2086
MflI RGATCY 3 cut(s) 1061, 1913, 2056
MhlI GDGCHC 2 cut(s) 1223, 1681
MmeI TCCRAC 3 cut(s) 1299, 2553, 3133
MreI CGCCGGCG 1 cut(s) 50
MroNI GCCGGC 1 cut(s) 50
MroXI GAANNNNTTC 3 cut(s) 98, 2472, 2895
MseI TTAA 6 cut(s) 810, 1089, 1406, 2025, 2307, 2357
MslI CAYNNNNRTG 4 cut(s) 864, 870, 882, 1040
MspA1I CMGCKG 3 cut(s) 1571, 2195, 2393
MspI CCGG 3 cut(s) 51, 2044, 2671
MspR9I CCNGG 6 cut(s) 71, 1164, 1730, 2045, 2128, 2976
Mva1269I GAATGC 2 cut(s) 889, 3013
MvaI CCWGG 5 cut(s) 71, 1164, 1730, 2128, 2976
MvnI CGCG 1 cut(s) 2901
NaeI GCCGGC 1 cut(s) 52
NciI CCSGG 1 cut(s) 2045
NcoI CCATGG 1 cut(s) 2886
NgoMIV GCCGGC 1 cut(s) 50
NheI GCTAGC 1 cut(s) 2687
NlaIV GGNNCC 6 cut(s) 279, 351, 390, 429, 468, 1161
NmeAIII GCCGAG 3 cut(s) 604, 1912, 2368
NmuCI GTSAC 3 cut(s) 855, 928, 1042
NruI TCGCGA 1 cut(s) 2901
NspI RCATGY 3 cut(s) 2038, 2872, 2971
NspV TTCGAA 2 cut(s) 1540, 1695
OliI CACNNNNGTG 1 cut(s) 1040
PaeR7I CTCGAG 1 cut(s) 999
PagI TCATGA 1 cut(s) 1386
PceI AGGCCT 1 cut(s) 2131
PciI ACATGT 1 cut(s) 2868
PciSI GCTCTTC 2 cut(s) 1620, 2798
PctI GAATGC 2 cut(s) 889, 3013
PdiI GCCGGC 1 cut(s) 52
PdmI GAANNNNTTC 3 cut(s) 98, 2472, 2895
PflFI GACNNNGTC 1 cut(s) 631
PfoI TCCNGGA 1 cut(s) 69
Ple19I CGATCG 1 cut(s) 2270
PmaCI CACGTG 1 cut(s) 1895
PmlI CACGTG 1 cut(s) 1895
Ppu21I YACGTR 2 cut(s) 1082, 1895
PscI ACATGT 1 cut(s) 2868
PshAI GACNNNNGTC 1 cut(s) 1231
Psp124BI GAGCTC 1 cut(s) 1223
Psp1406I AACGTT 2 cut(s) 2068, 2310
Psp6I CCWGG 5 cut(s) 69, 1162, 1728, 2126, 2974
PspCI CACGTG 1 cut(s) 1895
PspFI CCCAGC 1 cut(s) 2771
PspGI CCWGG 5 cut(s) 69, 1162, 1728, 2126, 2974
PspN4I GGNNCC 6 cut(s) 279, 351, 390, 429, 468, 1161
PstI CTGCAG 3 cut(s) 496, 616, 1794
PstNI CAGNNNCTG 2 cut(s) 806, 2963
PsuI RGATCY 3 cut(s) 1061, 1913, 2056
PsyI GACNNNGTC 1 cut(s) 631
PvuI CGATCG 1 cut(s) 2270
PvuII CAGCTG 3 cut(s) 1571, 2195, 2393
RruI TCGCGA 1 cut(s) 2901
RsaI GTAC 5 cut(s) 838, 1475, 2115, 2411, 3098
RsaNI GTAC 5 cut(s) 837, 1474, 2114, 2410, 3097
RseI CAYNNNNRTG 4 cut(s) 864, 870, 882, 1040
SacI GAGCTC 1 cut(s) 1223
SapI GCTCTTC 2 cut(s) 1620, 2798
SaqAI TTAA 6 cut(s) 810, 1089, 1406, 2025, 2307, 2357
ScrFI CCNGG 6 cut(s) 71, 1164, 1730, 2045, 2128, 2976
SduI GDGCHC 2 cut(s) 1223, 1681
SfcI CTRYAG 8 cut(s) 177, 492, 612, 1776, 1790, 1800, 2222, 2537
Sfr274I CTCGAG 1 cut(s) 999
SfuI TTCGAA 2 cut(s) 1540, 1695
SgrAI CRCCGGYG 1 cut(s) 50
SlaI CTCGAG 1 cut(s) 999
SmiMI CAYNNNNRTG 4 cut(s) 864, 870, 882, 1040
SmlI CTYRAG 7 cut(s) 732, 789, 999, 1605, 1650, 2315, 2439
SmoI CTYRAG 7 cut(s) 732, 789, 999, 1605, 1650, 2315, 2439
SnaBI TACGTA 1 cut(s) 1082
SseBI AGGCCT 1 cut(s) 2131
SsiI CCGC 5 cut(s) 108, 144, 887, 1465, 2086
SspMI CTAG 8 cut(s) 1922, 1964, 2001, 2568, 2688, 2696, 2817, 2993
SstI GAGCTC 1 cut(s) 1223
StuI AGGCCT 1 cut(s) 2131
StyD4I CCNGG 6 cut(s) 69, 1162, 1728, 2043, 2126, 2974
StyI CCWWGG 3 cut(s) 1866, 2695, 2886
TaaI ACNGT 6 cut(s) 244, 798, 851, 1414, 2611, 2940
TaiI ACGT 7 cut(s) 576, 1084, 1216, 1897, 2052, 2071, 2313
TatI WGTACW 1 cut(s) 3096
TauI GCSGC 1 cut(s) 2089
Tru1I TTAA 6 cut(s) 810, 1089, 1406, 2025, 2307, 2357
Tru9I TTAA 6 cut(s) 810, 1089, 1406, 2025, 2307, 2357
TseFI GTSAC 3 cut(s) 855, 928, 1042
Tsp45I GTSAC 3 cut(s) 855, 928, 1042
TspGWI ACGGA 1 cut(s) 2588
Tth111I GACNNNGTC 1 cut(s) 631
XapI RAATTY 2 cut(s) 97, 2472
XceI RCATGY 3 cut(s) 2038, 2872, 2971
XhoI CTCGAG 1 cut(s) 999
XmaJI CCTAGG 1 cut(s) 2695
XmiI GTMKAC 1 cut(s) 3081
XmnI GAANNNNTTC 3 cut(s) 98, 2472, 2895
XspI CTAG 8 cut(s) 1922, 1964, 2001, 2568, 2688, 2696, 2817, 2993
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.