Rh2DG424300

Golgin candidate

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
61496320 .. 61504464
8145 bp
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UTR
Exon/CDS
Intron
Rh2DG424300.1

Sequence Viewer

Length: 3159 bp
ATGGCGTGGTTCAGTGGGAAAGTCTCGTTGGGGAACTTCCCCGATCTCGCCGGCGCTGTAAATAAGCTCCAGGAGAGCGTCAAGAACATCGAGAAGAATTTCGACACCGCCCTCGGGTTTGAAGAGAAGGAGAAGCTTGAATCCGCCAATGAAGCTTCAGGATTATGGCCTTCATCTACAGAAAGGAAAGCACTATTTGATCCTGTTATGTCCTTTATGGGGCAAAAGAATGAGGATGACACTGTTGAATCATCACAGAAAGCTGAGTCTTCTGAGGCTCCACCTAAGGTTGAGGAATCACCAGCAGAGCTTGAATCTTCACCGAAGGTTGATATATCATCAGGGGAGCCTAAATCTCCACCTAAGGTTGAGAAATCGTCAGTGGAGCCTGAATCTCTACCTAAGGTTGAGAAATCATCAGTGGAGCCTGAATCTTCACCTAAGGTTGAGAAATCATCAGTGGAGCCTGAACCTCCACAATGTTCATCTGCAGTTGACGAAAAGGATGGGGCAAGTGAAACATTACCACATTCTGTAACTGAACAGACTGCTGCTAAGGAGGAGAATGACGTTGCCGAGGAAAAAAAAGATGAAAATCATGCTGAGACTGCAGAAGAAACAAAGACTTTGTCATTAGAGCCTGAGAGATCAGAGTCTCAATCGCCCTCAGTGCCAGTTGGGGCAACTGAGCCTACCATGAGTGCCTCATCATCAGATTTTGTTGGTTCTCAAGAAGAAGAAAATAAGATTTCAGTAGGGGGACTCTCAGAACTTTCAGAATCAGCTCAAGGAATGTCAGGAGCTGTTAATGTAGGTGAAGTAGAGGTGGGTGGTACTGCTCTGCACAGTGAGTCACATGATCATGCTGATGTGCATGAGAATGCTGATGCCCAGAAGGCACACAAAGAGAATGATAATGAAATTGTGACTCAGGCTGGAGATATTGCTGAAGTGGTTTCTATGGTCGAACCTGAAGAATCAACTGAGAGCCTGCCTCGAGATGTTGAGCCATCTGCTATTCACTCCGTTTCCACTGAGGTGACTCATAGCGCTGGTGGATCTCCTACCAACCAATTACCTAGTGTTTATGCTTCCAATGAGGCTTCAGATGTGTCTTCCAAGTTAGTTTTCAAACAAAAGGATGCTATCATTGAGGAACCTGGAATTGATCATCGAGTTGATGAGAATGAAACCAACTATAATGAGCAACGTCTGAGCTCAGGACAAAAGTCAGACTCTTCATACACAGGAGCAAATGTCTCTGATGCTTCCAACGCTTTGCTTGAATTAGAGAAGGTGAAGAAGGAGATGAAAATGATGGAAGCTGCATTGCAAGGTGCTGCAAGACAGGCTCAGGCAAAAGCTGATGAAATTGCCAAGTTCATGAACGAAAATGAGCAATTAAAAACTGTGGTTGAGGATTTGAAGAGAAAATCCAGTGAAGCAGAAGTTGAGTCTCTGCGGGAGGAGTACCATCAAAGGGTTGCAACACTTGAAAGGAAGGTTTACGCTCTTACTAAGGAAAGGGACACGCTTCGAAGGGAGCAGAATAAGAAAAGTGATGCAGCTGTACTTTTGAAGGAAAAGGATGAAATAATTACTCAAGTTATGGCTGAAGGTGAAGAGCTTTCAAAAAAACAGGCTACTCAAGAAGGTCTCATTAGGAAACTAAGGGCTCAGATTAGAGAGTTCGAAGAAGAGAAGAAAGGGCTGACTACCAAGCTCCAGGTAGAAGAGAATAAAGTAGAGAGTATCAAGAGGGACAAGACAGCTACAGAAAAGTTGCTGCAGGAAACTATAGAAAAGCACCAAACAGAACTTGCAGCACAGAAAGAGTATTATACTAATGCTTTGGCTGCTGCCAAGGAGGCAGAAGCAATGGCCGAGGCACGTGCTAACAATGAAGCCAGATCTGAACTAGAGAGTCGTCTAAGAGACGCTCAGGAGCGTGAAGCTATGCTAGTTCAGGCACTCGAAGAATTACGACAAACTCTAACTAGAACAGAACAGCAGGCAGTATTTAAAGAAGACATGCTTCGCCGGGACGTTGAGGATCTTCAAAAACGTTATCAAGCAAGTGAGCGGCGATGTGAGGAGTTGATCACGCAAGTACCAGAATCTACCAGGCCTCTTCTTAGGCAAATCGAAGCAATGCAGGAAACAACTTCCAGAAGGGCAGAAGCTTGGGCAGCTGTTGAGAGGTCTCTTACCAATCGACTACAGGAAGCAGAGGCCAAAGCTGCTGCTGCTGAGGAAAGGGAGCGATCGGTGAATGAACGCTTGTCTCAAACCTTATCTCGTATTAACGTTCTTGAGGCTCAGATTTCATGTCTTAGAGCCGAGCAATCCCAATTAAGTAAGTCTCTTGAAAAGGAGAGACAGAGAGCAGCTGAAAATAGGCAGGAGTACCTTGCTGCAAAGGAAGAAGCTGATACTCAAGAAGGCCGTGCAAACCAGCTTGAAGAAGAAATTCGTGAACTCAGGCGAAAACATAAGCAGGAGTTACAAGATGCTTTGATGCACAGGGAACTGCTACAGCAGGAGGTAGAAAGGGAGAAAGCTGCTAGGTTGGATTTGGAAAGGACATCTCGTGTCCGTTCTGCTACTGTATATGATCAGACAACTATAACAAGGCAGAGTTCTGCTTTTGAGAATGGAAGCTTGAACCGGAAACTTTCAAGTGCTAGCAGCCTAGGGAGCATGGAGGAAAGCTATTTTCTACAAGCATCTCTGGACTCGTCTGATAGTTTCTCTGAGAGGAGAAATGCTGGGGAAGCAACCATGACTCCATACTATATGAAGAGCATGACGCCTAGTGCTTTTGAGGCTTCCCTTCGTCAGAAGGAGGGTGAACTTGCATCTTACATGTCTCGTTTGGCATCCATGGAATCTATTCGCGATTCTCTCGCAGAGGAGTTGGTCAAAATGACAGAACAGTGTGAAAAGTTACGAGCAGAGGCTGGCATGTTACCTGGCATCAGAGCAGAGCTAGATGCACTAAGGAGGAGGCATTCTGCTGCACTGGAGCTGATGGGTGAACGAGATGAGGAGCTGGAGGAACTTCGTGCGGATATTGTAGACTTGAAGGAGATGTACAGAGAGCAAGTAAACTTGCTTGTGAACAAGATACAGATAATGAGTTCAGCAGTTGGAAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1052

Amino Acids

117.35

Weight (kDa)

4.83

Isoelectric Point (pI)

63.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TMF_DNA_bd PF12329 521 - 592 1.4e-13 TATA element modulatory factor 1 DNA binding
TMF_TATA_bd PF12325 936 - 1038 6.2e-28 TATA element modulatory factor 1 TATA binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 2083
AccI GTMKAC 1 cut(s) 3078
AccII CGCG 1 cut(s) 2898
AciI CCGC 5 cut(s) 108, 144, 1462, 2083, 3068
AclI AACGTT 2 cut(s) 2065, 2307
AclWI GGATC 3 cut(s) 194, 1066, 2061
AcoI YGGCCR 1 cut(s) 1881
AcsI RAATTY 2 cut(s) 97, 2469
AcuI CTGAAG 5 cut(s) 141, 969, 993, 1089, 1635
AcvI CACGTG 1 cut(s) 1892
AcyI GRCGYC 1 cut(s) 2810
AfaI GTAC 6 cut(s) 835, 1472, 1572, 2112, 2408, 3095
AfeI AGCGCT 1 cut(s) 1051
AfiI CCNNNNNNNGG 3 cut(s) 114, 219, 1480
AflIII ACRYGT 1 cut(s) 2865
AjnI CCWGG 5 cut(s) 69, 1159, 1725, 2123, 2971
AjuI GAANNNNNNNTTGG 4 cut(s) 11, 43, 1112, 1144
AleI CACNNNNGTG 1 cut(s) 1037
Alw21I GWGCWC 1 cut(s) 1220
AlwI GGATC 3 cut(s) 194, 1066, 2061
AlwNI CAGNNNCTG 2 cut(s) 803, 2960
Ama87I CYCGRG 2 cut(s) 113, 996
Aor51HI AGCGCT 1 cut(s) 1051
AoxI GGCC 5 cut(s) 167, 1881, 2126, 2232, 2443
ApoI RAATTY 2 cut(s) 97, 2469
ArsI GACNNNNNNTTYG 2 cut(s) 614, 646
Asp700I GAANNNNTTC 3 cut(s) 98, 2469, 2892
AspA2I CCTAGG 1 cut(s) 2692
AspLEI GCGC 2 cut(s) 56, 1052
AsuC2I CCSGG 1 cut(s) 2042
AsuII TTCGAA 2 cut(s) 1537, 1692
AsuNHI GCTAGC 1 cut(s) 2684
AvaI CYCGRG 2 cut(s) 113, 996
AvrII CCTAGG 1 cut(s) 2692
AxyI CCTNAGG 4 cut(s) 285, 363, 402, 441
BaeI ACNNNNGTAYC 2 cut(s) 2094, 2127
BanII GRGCYC 2 cut(s) 1220, 1678
BarI GAAGNNNNNNTAC 2 cut(s) 3077, 3109
BauI CACGAG 1 cut(s) 2589
BbrPI CACGTG 1 cut(s) 1892
BbsI GAAGAC 3 cut(s) 261, 1107, 2034
Bbv12I GWGCWC 1 cut(s) 1220
BbvCI CCTCAGC 1 cut(s) 2250
BccI CCATC 5 cut(s) 500, 1018, 1312, 1482, 3025
BceAI ACGGC 1 cut(s) 2430
BcgI CGANNNNNNTGC 2 cut(s) 1874, 1908
BciT130I CCWGG 5 cut(s) 71, 1161, 1727, 2125, 2973
BclI TGATCA 4 cut(s) 859, 1168, 2100, 2614
BcnI CCSGG 1 cut(s) 2042
BfaI CTAG 9 cut(s) 1080, 1919, 1961, 1998, 2565, 2685, 2693, 2814, 2990
BfmI CTRYAG 8 cut(s) 177, 489, 609, 1773, 1787, 1797, 2219, 2534
BfoI RGCGCY 2 cut(s) 57, 1053
BglI GCCNNNNNGGC 2 cut(s) 896, 1868
BglII AGATCT 1 cut(s) 1910
BlnI CCTAGG 1 cut(s) 2692
Bme1390I CCNGG 6 cut(s) 71, 1161, 1727, 2042, 2125, 2973
BmeT110I CYCGRG 2 cut(s) 113, 996
BmiI GGNNCC 6 cut(s) 279, 348, 387, 426, 465, 1158
BmrFI CCNGG 6 cut(s) 71, 1161, 1727, 2042, 2125, 2973
BmtI GCTAGC 1 cut(s) 2688
BoxI GACNNNNGTC 1 cut(s) 1228
BpiI GAAGAC 3 cut(s) 261, 1107, 2034
BplI GAGNNNNNCTC 2 cut(s) 979, 1011
BpmI CTGGAG 5 cut(s) 53, 957, 1709, 3044, 3074
Bpu10I CCTNAGC 5 cut(s) 555, 1219, 1353, 1941, 2250
Bpu14I TTCGAA 2 cut(s) 1537, 1692
BpuEI CTTGAG 6 cut(s) 714, 771, 1587, 1632, 2333, 2421
BpuMI CCSGG 1 cut(s) 2042
BsaAI YACGTR 1 cut(s) 1892
BsaBI GATNNNNATC 1 cut(s) 594
BsaHI GRCGYC 1 cut(s) 2810
BsaI GGTCTC 2 cut(s) 1661, 2208
BsaJI CCNNGG 6 cut(s) 112, 576, 1863, 1884, 2692, 2883
BsaWI WCCGGW 1 cut(s) 2667
BsaXI ACNNNNNCTCC 4 cut(s) 1242, 1272, 2770, 2800
Bsc4I CCNNNNNNNGG 3 cut(s) 114, 219, 1480
Bse118I RCCGGY 1 cut(s) 50
Bse1I ACTGG 3 cut(s) 674, 1437, 3027
Bse21I CCTNAGG 4 cut(s) 285, 363, 402, 441
Bse3DI GCAATG 3 cut(s) 1328, 1884, 2157
Bse8I GATNNNNATC 1 cut(s) 594
BseBI CCWGG 5 cut(s) 71, 1161, 1727, 2125, 2973
BseDI CCNNGG 6 cut(s) 112, 576, 1863, 1884, 2692, 2883
BseGI GGATG 5 cut(s) 241, 511, 1147, 1594, 2879
BseJI GATNNNNATC 1 cut(s) 594
BseLI CCNNNNNNNGG 3 cut(s) 114, 219, 1480
BseMI GCAATG 3 cut(s) 1328, 1884, 2157
BseNI ACTGG 3 cut(s) 674, 1437, 3027
BseRI GAGGAG 7 cut(s) 575, 1481, 2108, 2773, 2927, 3019, 3062
BseYI CCCAGC 1 cut(s) 2768
BsgI GTGCAG 2 cut(s) 827, 3003
Bsh1236I CGCG 1 cut(s) 2898
Bsh1285I CGRYCG 1 cut(s) 2267
BshFI GGCC 5 cut(s) 169, 1883, 2128, 2234, 2445
BsiEI CGRYCG 1 cut(s) 2267
BsiHKAI GWGCWC 1 cut(s) 1220
BsiHKCI CYCGRG 2 cut(s) 113, 996
BsiSI CCGG 3 cut(s) 51, 2041, 2668
BslFI GGGAC 4 cut(s) 774, 1541, 1775, 2057
BslI CCNNNNNNNGG 3 cut(s) 114, 219, 1480
BsmBI CGTCTC 1 cut(s) 1929
BsmFI GGGAC 4 cut(s) 774, 1541, 1775, 2057
BsmI GAATGC 2 cut(s) 886, 3010
BsnI GGCC 5 cut(s) 169, 1883, 2128, 2234, 2445
Bso31I GGTCTC 2 cut(s) 1661, 2208
BsoBI CYCGRG 2 cut(s) 113, 996
Bsp119I TTCGAA 2 cut(s) 1537, 1692
Bsp1286I GDGCHC 2 cut(s) 1220, 1678
Bsp1407I TGTACA 1 cut(s) 3093
Bsp19I CCATGG 1 cut(s) 2883
Bsp68I TCGCGA 1 cut(s) 2898
BspACI CCGC 5 cut(s) 108, 144, 1462, 2083, 3068
BspANI GGCC 5 cut(s) 169, 1883, 2128, 2234, 2445
BspFNI CGCG 1 cut(s) 2898
BspHI TCATGA 1 cut(s) 1383
BspLI GGNNCC 6 cut(s) 279, 348, 387, 426, 465, 1158
BspMAI CTGCAG 3 cut(s) 493, 613, 1791
BspOI GCTAGC 1 cut(s) 2688
BspPI GGATC 3 cut(s) 194, 1066, 2061
BspQI GCTCTTC 2 cut(s) 1617, 2795
BspT104I TTCGAA 2 cut(s) 1537, 1692
BspTNI GGTCTC 2 cut(s) 1661, 2208
BsrBI CCGCTC 1 cut(s) 2083
BsrDI GCAATG 3 cut(s) 1328, 1884, 2157
BsrFI RCCGGY 1 cut(s) 50
BsrGI TGTACA 1 cut(s) 3093
BsrI ACTGG 3 cut(s) 674, 1437, 3027
BssAI RCCGGY 1 cut(s) 50
BssECI CCNNGG 6 cut(s) 112, 576, 1863, 1884, 2692, 2883
BssNI GRCGYC 1 cut(s) 2810
BssSI CACGAG 1 cut(s) 2589
BssT1I CCWWGG 3 cut(s) 1863, 2692, 2883
Bst2BI CACGAG 1 cut(s) 2589
Bst2UI CCWGG 5 cut(s) 71, 1161, 1727, 2125, 2973
Bst4CI ACNGT 5 cut(s) 244, 848, 1411, 2608, 2937
Bst6I CTCTTC 8 cut(s) 117, 1243, 1421, 1617, 1692, 1728, 2136, 2795
BstACI GRCGYC 1 cut(s) 2810
BstAUI TGTACA 1 cut(s) 3093
BstBAI YACGTR 1 cut(s) 1892
BstBI TTCGAA 2 cut(s) 1537, 1692
BstC8I GCNNGC 5 cut(s) 52, 992, 2013, 2686, 2962
BstDSI CCRYGG 1 cut(s) 2883
BstF5I GGATG 5 cut(s) 241, 511, 1147, 1594, 2879
BstFNI CGCG 1 cut(s) 2898
BstH2I RGCGCY 2 cut(s) 57, 1053
BstHHI GCGC 2 cut(s) 56, 1052
BstMCI CGRYCG 1 cut(s) 2267
BstNI CCWGG 5 cut(s) 71, 1161, 1727, 2125, 2973
BstNSI RCATGY 3 cut(s) 2035, 2869, 2968
BstPAI GACNNNNGTC 1 cut(s) 1228
BstSCI CCNGG 6 cut(s) 69, 1159, 1725, 2040, 2123, 2971
BstSFI CTRYAG 8 cut(s) 177, 489, 609, 1773, 1787, 1797, 2219, 2534
BstUI CGCG 1 cut(s) 2898
BstV2I GAAGAC 3 cut(s) 261, 1107, 2034
BstX2I RGATCY 3 cut(s) 1058, 1910, 2053
BstYI RGATCY 3 cut(s) 1058, 1910, 2053
Bsu36I CCTNAGG 4 cut(s) 285, 363, 402, 441
BsuRI GGCC 5 cut(s) 169, 1883, 2128, 2234, 2445
BtgI CCRYGG 1 cut(s) 2883
BtgZI GCGATG 1 cut(s) 2101
BtsCI GGATG 5 cut(s) 241, 511, 1147, 1594, 2879
BtuMI TCGCGA 1 cut(s) 2898
Cac8I GCNNGC 5 cut(s) 52, 992, 2013, 2686, 2962
CaiI CAGNNNCTG 2 cut(s) 803, 2960
CciI TCATGA 1 cut(s) 1383
CfoI GCGC 2 cut(s) 56, 1052
Cfr10I RCCGGY 1 cut(s) 50
CseI GACGC 3 cut(s) 67, 1946, 2818
Csp6I GTAC 6 cut(s) 834, 1471, 1571, 2111, 2407, 3094
CviQI GTAC 6 cut(s) 834, 1471, 1571, 2111, 2407, 3094
DraI TTTAAA 1 cut(s) 2023
EaeI YGGCCR 1 cut(s) 1881
Eam1104I CTCTTC 8 cut(s) 117, 1243, 1421, 1617, 1692, 1728, 2136, 2795
EarI CTCTTC 8 cut(s) 117, 1243, 1421, 1617, 1692, 1728, 2136, 2795
EciI GGCGGA 1 cut(s) 133
Ecl136II GAGCTC 1 cut(s) 1218
Eco130I CCWWGG 3 cut(s) 1863, 2692, 2883
Eco147I AGGCCT 1 cut(s) 2128
Eco24I GRGCYC 2 cut(s) 1220, 1678
Eco31I GGTCTC 2 cut(s) 1661, 2208
Eco47III AGCGCT 1 cut(s) 1051
Eco53kI GAGCTC 1 cut(s) 1218
Eco57I CTGAAG 5 cut(s) 141, 969, 993, 1089, 1635
Eco72I CACGTG 1 cut(s) 1892
Eco81I CCTNAGG 4 cut(s) 285, 363, 402, 441
Eco88I CYCGRG 2 cut(s) 113, 996
EcoICRI GAGCTC 1 cut(s) 1218
EcoRII CCWGG 5 cut(s) 69, 1159, 1725, 2123, 2971
EcoT14I CCWWGG 3 cut(s) 1863, 2692, 2883
EcoT38I GRGCYC 2 cut(s) 1220, 1678
ErhI CCWWGG 3 cut(s) 1863, 2692, 2883
Esp3I CGTCTC 1 cut(s) 1929
FalI AAGNNNNNCTT 2 cut(s) 2019, 2051
FaqI GGGAC 4 cut(s) 774, 1541, 1775, 2057
FauI CCCGC 1 cut(s) 1455
FbaI TGATCA 4 cut(s) 859, 1168, 2100, 2614
FblI GTMKAC 1 cut(s) 3078
FokI GGATG 5 cut(s) 248, 518, 1154, 1601, 2866
FriOI GRGCYC 2 cut(s) 1220, 1678
FspBI CTAG 9 cut(s) 1080, 1919, 1961, 1998, 2565, 2685, 2693, 2814, 2990
GlaI GCGC 2 cut(s) 55, 1051
GsaI CCCAGC 1 cut(s) 2772
GsuI CTGGAG 5 cut(s) 53, 957, 1709, 3044, 3074
HaeII RGCGCY 2 cut(s) 57, 1053
HaeIII GGCC 5 cut(s) 169, 1883, 2128, 2234, 2445
HapII CCGG 3 cut(s) 51, 2041, 2668
HgaI GACGC 3 cut(s) 67, 1946, 2818
HhaI GCGC 2 cut(s) 56, 1052
Hin1I GRCGYC 1 cut(s) 2810
Hin6I GCGC 2 cut(s) 54, 1050
HinP1I GCGC 2 cut(s) 54, 1050
HincII GTYRAC 1 cut(s) 496
HindII GTYRAC 1 cut(s) 496
HindIII AAGCTT 4 cut(s) 134, 153, 2181, 2659
HpaII CCGG 3 cut(s) 51, 2041, 2668
Hpy166II GTNNAC 8 cut(s) 496, 1507, 2477, 2852, 3038, 3079, 3109, 3121
Hpy8I GTNNAC 8 cut(s) 496, 1507, 2477, 2852, 3038, 3079, 3109, 3121
HpyCH4III ACNGT 5 cut(s) 244, 848, 1411, 2608, 2937
HpyCH4IV ACGT 6 cut(s) 570, 1210, 1891, 2046, 2065, 2307
HpySE526I ACGT 6 cut(s) 570, 1210, 1891, 2046, 2065, 2307
Hsp92I GRCGYC 1 cut(s) 2810
HspAI GCGC 2 cut(s) 54, 1050
KroI GCCGGC 1 cut(s) 50
KroNI GCCGGC 1 cut(s) 52
Ksp22I TGATCA 4 cut(s) 859, 1168, 2100, 2614
LguI GCTCTTC 2 cut(s) 1617, 2795
MaeI CTAG 9 cut(s) 1080, 1919, 1961, 1998, 2565, 2685, 2693, 2814, 2990
MaeII ACGT 6 cut(s) 570, 1210, 1891, 2046, 2065, 2307
MaeIII GTNAC 7 cut(s) 535, 852, 925, 1039, 2502, 2946, 2967
MbiI CCGCTC 1 cut(s) 2083
MflI RGATCY 3 cut(s) 1058, 1910, 2053
MhlI GDGCHC 2 cut(s) 1220, 1678
MmeI TCCRAC 3 cut(s) 1296, 2550, 3130
MreI CGCCGGCG 1 cut(s) 50
MroNI GCCGGC 1 cut(s) 50
MroXI GAANNNNTTC 3 cut(s) 98, 2469, 2892
MseI TTAA 5 cut(s) 807, 1403, 2022, 2304, 2354
MslI CAYNNNNRTG 4 cut(s) 861, 867, 879, 1037
MspA1I CMGCKG 3 cut(s) 1568, 2192, 2390
MspI CCGG 3 cut(s) 51, 2041, 2668
MspR9I CCNGG 6 cut(s) 71, 1161, 1727, 2042, 2125, 2973
Mva1269I GAATGC 2 cut(s) 886, 3010
MvaI CCWGG 5 cut(s) 71, 1161, 1727, 2125, 2973
MvnI CGCG 1 cut(s) 2898
NaeI GCCGGC 1 cut(s) 52
NciI CCSGG 1 cut(s) 2042
NcoI CCATGG 1 cut(s) 2883
NgoMIV GCCGGC 1 cut(s) 50
NheI GCTAGC 1 cut(s) 2684
NlaIV GGNNCC 6 cut(s) 279, 348, 387, 426, 465, 1158
NmeAIII GCCGAG 3 cut(s) 601, 1909, 2365
NmuCI GTSAC 3 cut(s) 852, 925, 1039
NruI TCGCGA 1 cut(s) 2898
NspI RCATGY 3 cut(s) 2035, 2869, 2968
NspV TTCGAA 2 cut(s) 1537, 1692
OliI CACNNNNGTG 1 cut(s) 1037
PaeR7I CTCGAG 1 cut(s) 996
PagI TCATGA 1 cut(s) 1383
PceI AGGCCT 1 cut(s) 2128
PciI ACATGT 1 cut(s) 2865
PciSI GCTCTTC 2 cut(s) 1617, 2795
PctI GAATGC 2 cut(s) 886, 3010
PdiI GCCGGC 1 cut(s) 52
PdmI GAANNNNTTC 3 cut(s) 98, 2469, 2892
PflFI GACNNNGTC 1 cut(s) 628
PfoI TCCNGGA 1 cut(s) 69
Ple19I CGATCG 1 cut(s) 2267
PmaCI CACGTG 1 cut(s) 1892
PmlI CACGTG 1 cut(s) 1892
Ppu21I YACGTR 1 cut(s) 1892
PscI ACATGT 1 cut(s) 2865
PshAI GACNNNNGTC 1 cut(s) 1228
Psp124BI GAGCTC 1 cut(s) 1220
Psp1406I AACGTT 2 cut(s) 2065, 2307
Psp6I CCWGG 5 cut(s) 69, 1159, 1725, 2123, 2971
PspCI CACGTG 1 cut(s) 1892
PspFI CCCAGC 1 cut(s) 2768
PspGI CCWGG 5 cut(s) 69, 1159, 1725, 2123, 2971
PspN4I GGNNCC 6 cut(s) 279, 348, 387, 426, 465, 1158
PstI CTGCAG 3 cut(s) 493, 613, 1791
PstNI CAGNNNCTG 2 cut(s) 803, 2960
PsuI RGATCY 3 cut(s) 1058, 1910, 2053
PsyI GACNNNGTC 1 cut(s) 628
PvuI CGATCG 1 cut(s) 2267
PvuII CAGCTG 3 cut(s) 1568, 2192, 2390
RruI TCGCGA 1 cut(s) 2898
RsaI GTAC 6 cut(s) 835, 1472, 1572, 2112, 2408, 3095
RsaNI GTAC 6 cut(s) 834, 1471, 1571, 2111, 2407, 3094
RseI CAYNNNNRTG 4 cut(s) 861, 867, 879, 1037
SacI GAGCTC 1 cut(s) 1220
SapI GCTCTTC 2 cut(s) 1617, 2795
SaqAI TTAA 5 cut(s) 807, 1403, 2022, 2304, 2354
ScrFI CCNGG 6 cut(s) 71, 1161, 1727, 2042, 2125, 2973
SduI GDGCHC 2 cut(s) 1220, 1678
SfcI CTRYAG 8 cut(s) 177, 489, 609, 1773, 1787, 1797, 2219, 2534
Sfr274I CTCGAG 1 cut(s) 996
SfuI TTCGAA 2 cut(s) 1537, 1692
SgrAI CRCCGGYG 1 cut(s) 50
SlaI CTCGAG 1 cut(s) 996
SmiMI CAYNNNNRTG 4 cut(s) 861, 867, 879, 1037
SmlI CTYRAG 7 cut(s) 729, 786, 996, 1602, 1647, 2312, 2436
SmoI CTYRAG 7 cut(s) 729, 786, 996, 1602, 1647, 2312, 2436
SseBI AGGCCT 1 cut(s) 2128
SsiI CCGC 5 cut(s) 108, 144, 1462, 2083, 3068
SspMI CTAG 9 cut(s) 1080, 1919, 1961, 1998, 2565, 2685, 2693, 2814, 2990
SstI GAGCTC 1 cut(s) 1220
StuI AGGCCT 1 cut(s) 2128
StyD4I CCNGG 6 cut(s) 69, 1159, 1725, 2040, 2123, 2971
StyI CCWWGG 3 cut(s) 1863, 2692, 2883
TaaI ACNGT 5 cut(s) 244, 848, 1411, 2608, 2937
TaiI ACGT 6 cut(s) 573, 1213, 1894, 2049, 2068, 2310
TatI WGTACW 2 cut(s) 1570, 3093
TauI GCSGC 1 cut(s) 2086
Tru1I TTAA 5 cut(s) 807, 1403, 2022, 2304, 2354
Tru9I TTAA 5 cut(s) 807, 1403, 2022, 2304, 2354
TseFI GTSAC 3 cut(s) 852, 925, 1039
Tsp45I GTSAC 3 cut(s) 852, 925, 1039
TspGWI ACGGA 2 cut(s) 1015, 2585
Tth111I GACNNNGTC 1 cut(s) 628
XapI RAATTY 2 cut(s) 97, 2469
XceI RCATGY 3 cut(s) 2035, 2869, 2968
XhoI CTCGAG 1 cut(s) 996
XmaJI CCTAGG 1 cut(s) 2692
XmiI GTMKAC 1 cut(s) 3078
XmnI GAANNNNTTC 3 cut(s) 98, 2469, 2892
XspI CTAG 9 cut(s) 1080, 1919, 1961, 1998, 2565, 2685, 2693, 2814, 2990
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.