RLG00000019788

Golgin candidate

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
56761994 .. 56771499
9506 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019788

Sequence Viewer

Length: 3231 bp
ATGAACAAATTCTTACTCTCCACCACCATCCTTGTTAATTTCTTTCATAAAGCTCAACAAACCACAACGTGCTATGATTTGAGTCCCAAATCTCTGGGCTTTCGCCAGGTTGGTCATTGTACAACTGAATGTGAATCGAATCGGATTGGAAGAATGGCGTGGTTCAGTGGGAAAGTCTCGTTGGGGAACTTCCCCGATCTCGCCGGCGCTGTAAATAAGCTCCAGGAGAGCGTCAAGAACATCGAGAAGAATTTCGATACCGCCCTCGGGTTTGAAGAGAAGGAGAAGCTTGAATCCGCCAATGAAGCTTCAGGATTATGGCCTTCATCTACAGAAAGGAAGGCACTATTTGATCCTGTTATGTCCTTTATGGGGCAAAAGAATGAGGATGACACTGTTGAATCATCACAGAAAGCTGAGTCTTCTGAGGCTCCACTTAAGGTTGAGAAATCACCAGCAGAGCTTGAATCTTCACCCAAGGTTGAGAAATCGTCAGTGGAGCCCGAATCTTCACCTAAGGTTGAGAAATCGTCAGTGGAGCCTGGACCTCCACAATGTTCATCCGCAGCTGACGAAAAAGATGGGGCAAGTGAAACATTACCACATTCTGTAACTGAACAGACTGCTGCTAAGGAGGAAGACACTGCCGAGGAAAAAAAAGATGAAAATCATGCTGAGACTGCAGAAGAAACAAAGATTTTGTCATCAGAGCCTGAGAAATCAGAGTCTCAATCGCCCTCAGTGCCAGTTGGGGAAACTGAGCCTTCCATGAGTGCCTCATCATCAGATTTTGTTGGTTCTCAAGAAGAAGACAATAAGATTTCAGTAGGGGGACCCTCAGAACTTTCAGAATCAGCTCAAGGAATGTCAGGAGCTGTTAATGTAGGTGAAGTAGAGGTGGGTATTACTGCTCTGCACAGTGAGTTACAGGATCATGCTGATGTACATGAGAATGCGGATGCCCAGAAGGCACACAAAGAGAATAATAATGAAATTGTGACTCAGGCTGGAGATATTGCTGAAGTGGTTTCTATGGTCGAACCTGAGGAATCAACTCAGAGCCTGCCTCGAGATGTTGAGCCATCTGCTATTCACTCCGTTACCACTGAGGTGACTCATAGCGCTGGTGGATCTCCGACCAACCAATTACCTAGTGTTTATACTTCCATTGAGGCTTCGGATGCGTCTTCTGAGTTAGTTTTCAAACAAAAGGATGCTATCATTGAGGAACCTGAAATTGGTCATCAAGTTGATGAGAATGAAACCAACTATAATGAGCAACGTCTGAGCTCAGGACAGAAGTCAGACTCTTCAGACACAGGAGCAAATGTCTCTGATGCTTCCCACGCTTTGCTTGAATTAGAGAAGGTGAAGAAGGAGATGAAAATGATGGAAGCTGCATTGCAAGGTGCTGCAAGACAGGCTCAGGCAAAGGCCGATGAGATTGCCAAGTTCATGAACGAAAATGAGCAATTAAAAACTGTGGTTGAGGATTTGAAGAGAAAATCCAGTGAAGCAGAAGTTGAGTCTCTGCGGGAGGAGTACCATCAAAGGGTTGCAACACTTGAAAGGAAGGTTTACGCTCTTACTAAGGAAAGGGACACACTTCGAAGGGAGCAGAATAAGAAAAGTGATGCAGCTGCACTTTTGAAGGAAAAGGATGAAATAATTACTCAAGTTATGGCTGAAGGTGAAGAGCTTTCGAAAAAACAGGCTACTCAAGAAGGTCTCATTAGGAAACTAAGGGCTCAGATTAGAGAGTTCGAAGAAGAGAAGAAAGGGCTGAATACCAAGCTTCAGGTAGAAGAGAATAAAGTAGAGAGTATCAAGAGGGACAAGACAGCTACAGAAAAGTTGCTTCAGGAAACTATAGAAAAGCACCAAACAGAACTTGCAGCACAGAAAGAATATTATACTAATGCTTTGGCTGCTGCCAAGGAGGCAGAAGCAATGGCCGAGGCACGTGCTAACGATGAAGCCAGATCTGAACTAGAGAGTCGTCTAAGAGAGGCTCAGGAGCGTGAAGCTATGCTAGTTCAGGCACTCGAAGAATTACGACAAACTCTAACTAGAACAGAGCAGCAGGCAGTATTTAAAGAAGACATGCTTCGCCGGGACGTTGAGGATCTTCAAAAACGTTATCAAGCAAGTGAGCGGCGATGTGAGGAGTTGATCACGCAAGTACCAGAATCTACCAGGCCTCTTCTTAGGCAAATCGAAGCAATGCAGGAAACAACTTCAAGAAGGGCAGAAGCTTGGGCAGCTGTTGAGAGGTCTCTTACCAATCGACTACAGGAAGCAGAGGCCAAAGCTGCTGCTGCTGAGGAAAGAGAGCGATCAGTGAATGAACGCTTGTCTCAAACCTTATCTCGTATTAACGTTCTTGAGGCTCAGATTTCATGTCTTAGAGCCGAGCAATCCCAATTAAGTAAGTCTCTTGAAAAGGAGAGACAAGGAGCAGCTGAAAATAGGCAGGAGTACCTTGCTGCAAAGGAAGAAGCTGGTACTCAAGAAGGCCGTGCAAACCAGCTTGAAGAAGAAATTCGTGAACTCAGGCGAAAACATAAGCAGGAGTTACAAGATGCTTTGATGCACAGGGAACTGCTACAGCAGGAGGTAGAAAGGGAGAAAGCTGCTAGGTTGGATTTGGAAAGGACATCTCGTGTCCGTTCTGCTACTGTATCTGATCAGACAACTATAACAAGGCAGAGTTCTGCTTTTGAGAATGGAAGCTTGAACCGGAAACTTTCAAGTGCTAGCAGCCTAGGGAGCATGGAGGAAAGCTATTTTCTACAAGCATCTCTGGACTCGTCTGACAGTTTCTCTGAGAGGAGAAATGCCGGGGAAGCAACCATGACTCCATACTATATGAAGAGCATGACACCTAGTGCTTTTGAAGCTTCCCTTCGTCAGAAGGAGGGTGAACTTGCATCTTACATGTCTCGTTTGGCATCCATGGAATCTATTCGTGATTCTCTTGCTGAGGAGTTGGTCAAAATGACAGAACAGTGTGAAAAGTTACGAGCAGAGGCTGGCATGTTACCTGGCATCAGAGCAGAGCTGGATGCACTGAGGAGGAGGCATTCTGCTGCACTGGAGCTGATGGGTGAACGAGATGAGGAGCTGGAGGAACTTCGTGCGGATATTGTAGACTTGAAGGAGATGTACAGAGAGCAAGTGAACTTGCTTGTGAACAAGATACAGATAATGAGTTCAGCAGTTGGAAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1077

Amino Acids

120.01

Weight (kDa)

4.87

Isoelectric Point (pI)

62.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TMF_DNA_bd PF12329 545 - 616 3.2e-14 TATA element modulatory factor 1 DNA binding
TMF_TATA_bd PF12325 960 - 1062 6.4e-28 TATA element modulatory factor 1 TATA binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 2155
AccI GTMKAC 1 cut(s) 3150
AciI CCGC 7 cut(s) 261, 297, 564, 956, 1534, 2155, 3140
AclI AACGTT 2 cut(s) 2137, 2379
AclWI GGATC 4 cut(s) 347, 939, 1138, 2133
AcoI YGGCCR 1 cut(s) 1953
AcsI RAATTY 3 cut(s) 8, 250, 2541
AcuI CTGAAG 6 cut(s) 294, 1041, 1296, 1707, 1781, 1844
AcvI CACGTG 1 cut(s) 1964
AdeI CACNNNGTG 2 cut(s) 69, 2888
AfaI GTAC 7 cut(s) 121, 945, 1544, 2184, 2480, 2506, 3167
AfeI AGCGCT 1 cut(s) 1123
AfiI CCNNNNNNNGG 4 cut(s) 267, 372, 1238, 1552
AflII CTTAAG 1 cut(s) 437
AflIII ACRYGT 1 cut(s) 2937
AjnI CCWGG 5 cut(s) 105, 222, 541, 2195, 3043
AjuI GAANNNNNNNTTGG 4 cut(s) 164, 196, 1221, 1253
AleI CACNNNNGTG 1 cut(s) 1109
Alw21I GWGCWC 1 cut(s) 1292
AlwI GGATC 4 cut(s) 347, 939, 1138, 2133
AlwNI CAGNNNCTG 4 cut(s) 713, 875, 1063, 3032
Ama87I CYCGRG 2 cut(s) 266, 1068
Aor51HI AGCGCT 1 cut(s) 1123
AoxI GGCC 6 cut(s) 320, 1434, 1953, 2198, 2304, 2515
ApoI RAATTY 3 cut(s) 8, 250, 2541
ArsI GACNNNNNNTTYG 2 cut(s) 686, 718
Asp700I GAANNNNTTC 4 cut(s) 8, 251, 2541, 2964
AspA2I CCTAGG 1 cut(s) 2764
AspLEI GCGC 2 cut(s) 209, 1124
AspS9I GGNCC 2 cut(s) 545, 833
AsuC2I CCSGG 2 cut(s) 2114, 2842
AsuHPI GGTGA 9 cut(s) 444, 465, 504, 899, 1123, 1381, 1703, 2933, 3119
AsuII TTCGAA 3 cut(s) 1609, 1703, 1764
AsuNHI GCTAGC 1 cut(s) 2756
AvaI CYCGRG 2 cut(s) 266, 1068
AvaII GGWCC 2 cut(s) 545, 833
AvrII CCTAGG 1 cut(s) 2764
AxyI CCTNAGG 2 cut(s) 516, 1044
BaeI ACNNNNGTAYC 2 cut(s) 2166, 2199
BanII GRGCYC 3 cut(s) 504, 1292, 1750
BarI GAAGNNNNNNTAC 2 cut(s) 3149, 3181
BauI CACGAG 1 cut(s) 2661
BbrPI CACGTG 1 cut(s) 1964
BbsI GAAGAC 5 cut(s) 414, 645, 816, 1179, 2106
Bbv12I GWGCWC 1 cut(s) 1292
BbvCI CCTCAGC 2 cut(s) 2322, 2982
BccI CCATC 6 cut(s) 35, 575, 1090, 1384, 1554, 3097
BceAI ACGGC 1 cut(s) 2502
BcgI CGANNNNNNTGC 4 cut(s) 1427, 1461, 1946, 1980
BciT130I CCWGG 5 cut(s) 107, 224, 543, 2197, 3045
BclI TGATCA 2 cut(s) 2172, 2686
BcnI CCSGG 2 cut(s) 2114, 2842
BfaI CTAG 8 cut(s) 1152, 1991, 2033, 2070, 2637, 2757, 2765, 2886
BfmI CTRYAG 6 cut(s) 330, 681, 1845, 1869, 2291, 2606
BfoI RGCGCY 2 cut(s) 210, 1125
BfrI CTTAAG 1 cut(s) 437
BglI GCCNNNNNGGC 2 cut(s) 968, 1940
BglII AGATCT 1 cut(s) 1982
BlnI CCTAGG 1 cut(s) 2764
Bme1390I CCNGG 7 cut(s) 107, 224, 543, 2114, 2197, 2842, 3045
Bme18I GGWCC 2 cut(s) 545, 833
BmeT110I CYCGRG 2 cut(s) 266, 1068
BmgT120I GGNCC 2 cut(s) 545, 833
BmiI GGNNCC 6 cut(s) 432, 501, 540, 834, 835, 1230
BmrFI CCNGG 7 cut(s) 107, 224, 543, 2114, 2197, 2842, 3045
BmtI GCTAGC 1 cut(s) 2760
BoxI GACNNNNGTC 1 cut(s) 1300
BpiI GAAGAC 5 cut(s) 414, 645, 816, 1179, 2106
BplI GAGNNNNNCTC 2 cut(s) 1051, 1083
BpmI CTGGAG 4 cut(s) 206, 1029, 3116, 3146
Bpu10I CCTNAGC 6 cut(s) 630, 1291, 1425, 2013, 2322, 2982
Bpu14I TTCGAA 3 cut(s) 1609, 1703, 1764
BpuEI CTTGAG 6 cut(s) 786, 843, 1659, 1704, 2405, 2493
BpuMI CCSGG 2 cut(s) 2114, 2842
BsaAI YACGTR 1 cut(s) 1964
BsaBI GATNNNNATC 1 cut(s) 666
BsaI GGTCTC 2 cut(s) 1733, 2280
BsaJI CCNNGG 8 cut(s) 265, 477, 648, 1935, 1956, 2764, 2841, 2955
BsaWI WCCGGW 1 cut(s) 2739
BsaXI ACNNNNNCTCC 4 cut(s) 1314, 1344, 2842, 2872
Bsc4I CCNNNNNNNGG 4 cut(s) 267, 372, 1238, 1552
Bse118I RCCGGY 1 cut(s) 203
Bse1I ACTGG 3 cut(s) 746, 1509, 3099
Bse21I CCTNAGG 2 cut(s) 516, 1044
Bse3DI GCAATG 3 cut(s) 1400, 1956, 2229
Bse8I GATNNNNATC 1 cut(s) 666
BseBI CCWGG 5 cut(s) 107, 224, 543, 2197, 3045
BseDI CCNNGG 8 cut(s) 265, 477, 648, 1935, 1956, 2764, 2841, 2955
BseGI GGATG 9 cut(s) 27, 394, 560, 964, 1186, 1219, 1666, 2951, 3070
BseJI GATNNNNATC 1 cut(s) 666
BseLI CCNNNNNNNGG 4 cut(s) 267, 372, 1238, 1552
BseMI GCAATG 3 cut(s) 1400, 1956, 2229
BseNI ACTGG 3 cut(s) 746, 1509, 3099
BseRI GAGGAG 7 cut(s) 1553, 2180, 2845, 2999, 3088, 3091, 3134
BsgI GTGCAG 3 cut(s) 899, 1626, 3075
BshFI GGCC 6 cut(s) 322, 1436, 1955, 2200, 2306, 2517
BsiHKAI GWGCWC 1 cut(s) 1292
BsiHKCI CYCGRG 2 cut(s) 266, 1068
BsiSI CCGG 4 cut(s) 204, 2113, 2740, 2841
BslFI GGGAC 5 cut(s) 69, 846, 1613, 1847, 2129
BslI CCNNNNNNNGG 4 cut(s) 267, 372, 1238, 1552
BsmFI GGGAC 5 cut(s) 69, 846, 1613, 1847, 2129
BsmI GAATGC 2 cut(s) 958, 3082
BsnI GGCC 6 cut(s) 322, 1436, 1955, 2200, 2306, 2517
Bso31I GGTCTC 2 cut(s) 1733, 2280
BsoBI CYCGRG 2 cut(s) 266, 1068
Bsp119I TTCGAA 3 cut(s) 1609, 1703, 1764
Bsp1286I GDGCHC 3 cut(s) 504, 1292, 1750
Bsp1407I TGTACA 3 cut(s) 119, 943, 3165
Bsp143I GATC 9 cut(s) 196, 352, 931, 1130, 1982, 2125, 2172, 2336, 2686
Bsp19I CCATGG 1 cut(s) 2955
BspACI CCGC 7 cut(s) 261, 297, 564, 956, 1534, 2155, 3140
BspANI GGCC 6 cut(s) 322, 1436, 1955, 2200, 2306, 2517
BspHI TCATGA 1 cut(s) 1455
BspLI GGNNCC 6 cut(s) 432, 501, 540, 834, 835, 1230
BspMAI CTGCAG 1 cut(s) 685
BspOI GCTAGC 1 cut(s) 2760
BspPI GGATC 4 cut(s) 347, 939, 1138, 2133
BspQI GCTCTTC 2 cut(s) 1689, 2867
BspT104I TTCGAA 3 cut(s) 1609, 1703, 1764
BspTI CTTAAG 1 cut(s) 437
BspTNI GGTCTC 2 cut(s) 1733, 2280
BsrBI CCGCTC 1 cut(s) 2155
BsrDI GCAATG 3 cut(s) 1400, 1956, 2229
BsrFI RCCGGY 1 cut(s) 203
BsrGI TGTACA 3 cut(s) 119, 943, 3165
BsrI ACTGG 3 cut(s) 746, 1509, 3099
BssAI RCCGGY 1 cut(s) 203
BssECI CCNNGG 8 cut(s) 265, 477, 648, 1935, 1956, 2764, 2841, 2955
BssMI GATC 9 cut(s) 196, 352, 931, 1130, 1982, 2125, 2172, 2336, 2686
BssSI CACGAG 1 cut(s) 2661
BssT1I CCWWGG 4 cut(s) 477, 1935, 2764, 2955
Bst2BI CACGAG 1 cut(s) 2661
Bst2UI CCWGG 5 cut(s) 107, 224, 543, 2197, 3045
Bst4CI ACNGT 6 cut(s) 397, 920, 1483, 2680, 2819, 3009
Bst6I CTCTTC 8 cut(s) 270, 1315, 1493, 1689, 1764, 1800, 2208, 2867
BstAFI CTTAAG 1 cut(s) 437
BstAUI TGTACA 3 cut(s) 119, 943, 3165
BstBAI YACGTR 1 cut(s) 1964
BstBI TTCGAA 3 cut(s) 1609, 1703, 1764
BstC8I GCNNGC 5 cut(s) 205, 1064, 2085, 2758, 3034
BstDSI CCRYGG 1 cut(s) 2955
BstF5I GGATG 9 cut(s) 27, 394, 560, 964, 1186, 1219, 1666, 2951, 3070
BstH2I RGCGCY 2 cut(s) 210, 1125
BstHHI GCGC 2 cut(s) 209, 1124
BstKTI GATC 9 cut(s) 199, 355, 934, 1133, 1985, 2128, 2175, 2339, 2689
BstMBI GATC 9 cut(s) 196, 352, 931, 1130, 1982, 2125, 2172, 2336, 2686
BstNI CCWGG 5 cut(s) 107, 224, 543, 2197, 3045
BstNSI RCATGY 3 cut(s) 2107, 2941, 3040
BstPAI GACNNNNGTC 1 cut(s) 1300
BstSCI CCNGG 7 cut(s) 105, 222, 541, 2112, 2195, 2840, 3043
BstSFI CTRYAG 6 cut(s) 330, 681, 1845, 1869, 2291, 2606
BstV2I GAAGAC 5 cut(s) 414, 645, 816, 1179, 2106
BstX2I RGATCY 3 cut(s) 1130, 1982, 2125
BstXI CCANNNNNNTGG 1 cut(s) 94
BstYI RGATCY 3 cut(s) 1130, 1982, 2125
Bsu36I CCTNAGG 2 cut(s) 516, 1044
BsuRI GGCC 6 cut(s) 322, 1436, 1955, 2200, 2306, 2517
BtgI CCRYGG 1 cut(s) 2955
BtgZI GCGATG 1 cut(s) 2173
BtsCI GGATG 9 cut(s) 27, 394, 560, 964, 1186, 1219, 1666, 2951, 3070
BtsI GCAGTG 1 cut(s) 642
Cac8I GCNNGC 5 cut(s) 205, 1064, 2085, 2758, 3034
CaiI CAGNNNCTG 4 cut(s) 713, 875, 1063, 3032
CciI TCATGA 1 cut(s) 1455
CfoI GCGC 2 cut(s) 209, 1124
Cfr10I RCCGGY 1 cut(s) 203
Cfr13I GGNCC 2 cut(s) 545, 833
CseI GACGC 2 cut(s) 220, 1173
Csp6I GTAC 7 cut(s) 120, 944, 1543, 2183, 2479, 2505, 3166
CspCI CAANNNNNGTGG 2 cut(s) 13, 48
CviQI GTAC 7 cut(s) 120, 944, 1543, 2183, 2479, 2505, 3166
DpnI GATC 9 cut(s) 198, 354, 933, 1132, 1984, 2127, 2174, 2338, 2688
DpnII GATC 9 cut(s) 196, 352, 931, 1130, 1982, 2125, 2172, 2336, 2686
DraI TTTAAA 1 cut(s) 2095
DraIII CACNNNGTG 2 cut(s) 69, 2888
EaeI YGGCCR 1 cut(s) 1953
Eam1104I CTCTTC 8 cut(s) 270, 1315, 1493, 1689, 1764, 1800, 2208, 2867
EarI CTCTTC 8 cut(s) 270, 1315, 1493, 1689, 1764, 1800, 2208, 2867
EciI GGCGGA 1 cut(s) 286
Ecl136II GAGCTC 1 cut(s) 1290
Eco130I CCWWGG 4 cut(s) 477, 1935, 2764, 2955
Eco147I AGGCCT 1 cut(s) 2200
Eco24I GRGCYC 3 cut(s) 504, 1292, 1750
Eco31I GGTCTC 2 cut(s) 1733, 2280
Eco47I GGWCC 2 cut(s) 545, 833
Eco47III AGCGCT 1 cut(s) 1123
Eco53kI GAGCTC 1 cut(s) 1290
Eco57I CTGAAG 6 cut(s) 294, 1041, 1296, 1707, 1781, 1844
Eco72I CACGTG 1 cut(s) 1964
Eco81I CCTNAGG 2 cut(s) 516, 1044
Eco88I CYCGRG 2 cut(s) 266, 1068
EcoICRI GAGCTC 1 cut(s) 1290
EcoO109I RGGNCCY 1 cut(s) 833
EcoRII CCWGG 5 cut(s) 105, 222, 541, 2195, 3043
EcoT14I CCWWGG 4 cut(s) 477, 1935, 2764, 2955
EcoT38I GRGCYC 3 cut(s) 504, 1292, 1750
ErhI CCWWGG 4 cut(s) 477, 1935, 2764, 2955
FalI AAGNNNNNCTT 4 cut(s) 2091, 2123, 2889, 2921
FaqI GGGAC 5 cut(s) 69, 846, 1613, 1847, 2129
FauI CCCGC 1 cut(s) 1527
FbaI TGATCA 2 cut(s) 2172, 2686
FblI GTMKAC 1 cut(s) 3150
FokI GGATG 9 cut(s) 14, 401, 547, 971, 1193, 1226, 1673, 2938, 3077
FriOI GRGCYC 3 cut(s) 504, 1292, 1750
FspBI CTAG 8 cut(s) 1152, 1991, 2033, 2070, 2637, 2757, 2765, 2886
GlaI GCGC 2 cut(s) 208, 1123
GsuI CTGGAG 4 cut(s) 206, 1029, 3116, 3146
HaeII RGCGCY 2 cut(s) 210, 1125
HaeIII GGCC 6 cut(s) 322, 1436, 1955, 2200, 2306, 2517
HapII CCGG 4 cut(s) 204, 2113, 2740, 2841
HgaI GACGC 2 cut(s) 220, 1173
HhaI GCGC 2 cut(s) 209, 1124
Hin6I GCGC 2 cut(s) 207, 1122
HinP1I GCGC 2 cut(s) 207, 1122
HindIII AAGCTT 6 cut(s) 287, 306, 1793, 2253, 2731, 2898
HpaII CCGG 4 cut(s) 204, 2113, 2740, 2841
HphI GGTGA 9 cut(s) 444, 465, 504, 899, 1123, 1381, 1703, 2933, 3119
Hpy166II GTNNAC 7 cut(s) 1579, 2549, 2924, 3110, 3151, 3181, 3193
Hpy8I GTNNAC 7 cut(s) 1579, 2549, 2924, 3110, 3151, 3181, 3193
HpyCH4III ACNGT 6 cut(s) 397, 920, 1483, 2680, 2819, 3009
HpyCH4IV ACGT 6 cut(s) 68, 1282, 1963, 2118, 2137, 2379
HpySE526I ACGT 6 cut(s) 68, 1282, 1963, 2118, 2137, 2379
HspAI GCGC 2 cut(s) 207, 1122
KflI GGGWCCC 1 cut(s) 833
KroI GCCGGC 1 cut(s) 203
KroNI GCCGGC 1 cut(s) 205
Ksp22I TGATCA 2 cut(s) 2172, 2686
Kzo9I GATC 9 cut(s) 196, 352, 931, 1130, 1982, 2125, 2172, 2336, 2686
LguI GCTCTTC 2 cut(s) 1689, 2867
MaeI CTAG 8 cut(s) 1152, 1991, 2033, 2070, 2637, 2757, 2765, 2886
MaeII ACGT 6 cut(s) 68, 1282, 1963, 2118, 2137, 2379
MaeIII GTNAC 8 cut(s) 610, 924, 997, 1099, 1111, 2574, 3018, 3039
MalI GATC 9 cut(s) 198, 354, 933, 1132, 1984, 2127, 2174, 2338, 2688
MbiI CCGCTC 1 cut(s) 2155
MboI GATC 9 cut(s) 196, 352, 931, 1130, 1982, 2125, 2172, 2336, 2686
MflI RGATCY 3 cut(s) 1130, 1982, 2125
MhlI GDGCHC 3 cut(s) 504, 1292, 1750
MmeI TCCRAC 3 cut(s) 1160, 2622, 3202
MreI CGCCGGCG 1 cut(s) 203
MroNI GCCGGC 1 cut(s) 203
MroXI GAANNNNTTC 4 cut(s) 8, 251, 2541, 2964
MseI TTAA 7 cut(s) 36, 438, 879, 1475, 2094, 2376, 2426
MslI CAYNNNNRTG 3 cut(s) 939, 951, 1109
MspA1I CMGCKG 4 cut(s) 569, 1640, 2264, 2462
MspCI CTTAAG 1 cut(s) 437
MspI CCGG 4 cut(s) 204, 2113, 2740, 2841
MspR9I CCNGG 7 cut(s) 107, 224, 543, 2114, 2197, 2842, 3045
Mva1269I GAATGC 2 cut(s) 958, 3082
MvaI CCWGG 5 cut(s) 107, 224, 543, 2197, 3045
NaeI GCCGGC 1 cut(s) 205
NciI CCSGG 2 cut(s) 2114, 2842
NcoI CCATGG 1 cut(s) 2955
NdeII GATC 9 cut(s) 196, 352, 931, 1130, 1982, 2125, 2172, 2336, 2686
NgoMIV GCCGGC 1 cut(s) 203
NheI GCTAGC 1 cut(s) 2756
NlaIV GGNNCC 6 cut(s) 432, 501, 540, 834, 835, 1230
NmeAIII GCCGAG 3 cut(s) 673, 1981, 2437
NmuCI GTSAC 2 cut(s) 997, 1111
NspI RCATGY 3 cut(s) 2107, 2941, 3040
NspV TTCGAA 3 cut(s) 1609, 1703, 1764
OliI CACNNNNGTG 1 cut(s) 1109
PaeR7I CTCGAG 1 cut(s) 1068
PagI TCATGA 1 cut(s) 1455
PceI AGGCCT 1 cut(s) 2200
PciI ACATGT 1 cut(s) 2937
PciSI GCTCTTC 2 cut(s) 1689, 2867
PctI GAATGC 2 cut(s) 958, 3082
PdiI GCCGGC 1 cut(s) 205
PdmI GAANNNNTTC 4 cut(s) 8, 251, 2541, 2964
PfoI TCCNGGA 1 cut(s) 222
PmaCI CACGTG 1 cut(s) 1964
PmlI CACGTG 1 cut(s) 1964
Ppu21I YACGTR 1 cut(s) 1964
PpuMI RGGWCCY 1 cut(s) 833
PscI ACATGT 1 cut(s) 2937
PshAI GACNNNNGTC 1 cut(s) 1300
Psp124BI GAGCTC 1 cut(s) 1292
Psp1406I AACGTT 2 cut(s) 2137, 2379
Psp5II RGGWCCY 1 cut(s) 833
Psp6I CCWGG 5 cut(s) 105, 222, 541, 2195, 3043
PspCI CACGTG 1 cut(s) 1964
PspGI CCWGG 5 cut(s) 105, 222, 541, 2195, 3043
PspN4I GGNNCC 6 cut(s) 432, 501, 540, 834, 835, 1230
PspPI GGNCC 2 cut(s) 545, 833
PspPPI RGGWCCY 1 cut(s) 833
PstI CTGCAG 1 cut(s) 685
PstNI CAGNNNCTG 4 cut(s) 713, 875, 1063, 3032
PsuI RGATCY 3 cut(s) 1130, 1982, 2125
PvuII CAGCTG 4 cut(s) 569, 1640, 2264, 2462
RsaI GTAC 7 cut(s) 121, 945, 1544, 2184, 2480, 2506, 3167
RsaNI GTAC 7 cut(s) 120, 944, 1543, 2183, 2479, 2505, 3166
RseI CAYNNNNRTG 3 cut(s) 939, 951, 1109
SacI GAGCTC 1 cut(s) 1292
SapI GCTCTTC 2 cut(s) 1689, 2867
SaqAI TTAA 7 cut(s) 36, 438, 879, 1475, 2094, 2376, 2426
Sau3AI GATC 9 cut(s) 196, 352, 931, 1130, 1982, 2125, 2172, 2336, 2686
Sau96I GGNCC 2 cut(s) 545, 833
ScrFI CCNGG 7 cut(s) 107, 224, 543, 2114, 2197, 2842, 3045
SduI GDGCHC 3 cut(s) 504, 1292, 1750
SfcI CTRYAG 6 cut(s) 330, 681, 1845, 1869, 2291, 2606
Sfr274I CTCGAG 1 cut(s) 1068
SfuI TTCGAA 3 cut(s) 1609, 1703, 1764
SgrAI CRCCGGYG 1 cut(s) 203
SinI GGWCC 2 cut(s) 545, 833
SlaI CTCGAG 1 cut(s) 1068
SmiMI CAYNNNNRTG 3 cut(s) 939, 951, 1109
SmlI CTYRAG 8 cut(s) 437, 801, 858, 1068, 1674, 1719, 2384, 2508
SmoI CTYRAG 8 cut(s) 437, 801, 858, 1068, 1674, 1719, 2384, 2508
SseBI AGGCCT 1 cut(s) 2200
SsiI CCGC 7 cut(s) 261, 297, 564, 956, 1534, 2155, 3140
SspI AATATT 1 cut(s) 1910
SspMI CTAG 8 cut(s) 1152, 1991, 2033, 2070, 2637, 2757, 2765, 2886
SstI GAGCTC 1 cut(s) 1292
StuI AGGCCT 1 cut(s) 2200
StyD4I CCNGG 7 cut(s) 105, 222, 541, 2112, 2195, 2840, 3043
StyI CCWWGG 4 cut(s) 477, 1935, 2764, 2955
TaaI ACNGT 6 cut(s) 397, 920, 1483, 2680, 2819, 3009
TaiI ACGT 6 cut(s) 71, 1285, 1966, 2121, 2140, 2382
TatI WGTACW 3 cut(s) 119, 943, 3165
TauI GCSGC 1 cut(s) 2158
Tru1I TTAA 7 cut(s) 36, 438, 879, 1475, 2094, 2376, 2426
Tru9I TTAA 7 cut(s) 36, 438, 879, 1475, 2094, 2376, 2426
TseFI GTSAC 2 cut(s) 997, 1111
Tsp45I GTSAC 2 cut(s) 997, 1111
TspGWI ACGGA 2 cut(s) 1087, 2657
Vha464I CTTAAG 1 cut(s) 437
VpaK11BI GGWCC 2 cut(s) 545, 833
XapI RAATTY 3 cut(s) 8, 250, 2541
XceI RCATGY 3 cut(s) 2107, 2941, 3040
XhoI CTCGAG 1 cut(s) 1068
XmaJI CCTAGG 1 cut(s) 2764
XmiI GTMKAC 1 cut(s) 3150
XmnI GAANNNNTTC 4 cut(s) 8, 251, 2541, 2964
XspI CTAG 8 cut(s) 1152, 1991, 2033, 2070, 2637, 2757, 2765, 2886
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.