RchiOBHm_Chr2g0141001

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
58585296 .. 58586064
769 bp
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UTR
Exon/CDS
Intron
PRQ51134

Sequence Viewer

Length: 162 bp
ATGGGCTGGGCTTCTCATCGGGCCTATGTTTTAGCTTTTATTGTTTTAAGGATTAATTTTCTGATTCTGGTTCTATTGGAGCTCAGGAGAAAATTAATTTTCCTTTTTAGTTTTGTCTGTATAGGCCTGTCCATCAAACTGGTTAGGTGTTTTCTTTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

53

Amino Acids

6.27

Weight (kDa)

10.9

Isoelectric Point (pI)

21.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AluBI AGCT 2 cut(s) 35, 82
AluI AGCT 2 cut(s) 35, 82
Alw21I GWGCWC 1 cut(s) 84
AoxI GGCC 2 cut(s) 21, 124
AseI ATTAAT 2 cut(s) 54, 95
AspS9I GGNCC 1 cut(s) 21
BanII GRGCYC 1 cut(s) 84
Bbv12I GWGCWC 1 cut(s) 84
BccI CCATC 1 cut(s) 140
BmgT120I GGNCC 1 cut(s) 21
Bpu10I CCTNAGC 1 cut(s) 83
Bse1I ACTGG 1 cut(s) 144
BseMII CTCAG 1 cut(s) 97
BseNI ACTGG 1 cut(s) 144
BseYI CCCAGC 1 cut(s) 6
BshFI GGCC 2 cut(s) 23, 126
BsiHKAI GWGCWC 1 cut(s) 84
BsnI GGCC 2 cut(s) 23, 126
Bsp1286I GDGCHC 1 cut(s) 84
BspANI GGCC 2 cut(s) 23, 126
BspCNI CTCAG 1 cut(s) 96
BsrI ACTGG 1 cut(s) 144
BstDEI CTNAG 1 cut(s) 83
BstXI CCANNNNNNTGG 1 cut(s) 139
BsuRI GGCC 2 cut(s) 23, 126
Cfr13I GGNCC 1 cut(s) 21
CviJI RGCY 6 cut(s) 6, 11, 23, 35, 82, 126
CviKI_1 RGCY 6 cut(s) 6, 11, 23, 35, 82, 126
DdeI CTNAG 1 cut(s) 83
Ecl136II GAGCTC 1 cut(s) 82
Eco147I AGGCCT 1 cut(s) 126
Eco24I GRGCYC 1 cut(s) 84
Eco53kI GAGCTC 1 cut(s) 82
EcoICRI GAGCTC 1 cut(s) 82
EcoT38I GRGCYC 1 cut(s) 84
FaiI YATR 2 cut(s) 27, 122
FriOI GRGCYC 1 cut(s) 84
GsaI CCCAGC 1 cut(s) 10
HaeIII GGCC 2 cut(s) 23, 126
HinfI GANTC 1 cut(s) 64
Hpy188I TCNGA 1 cut(s) 63
Hpy188III TCNNGA 1 cut(s) 85
HpyF3I CTNAG 1 cut(s) 83
LmnI GCTCC 1 cut(s) 79
LpnPI CCDG 4 cut(s) 53, 70, 125, 140
MhlI GDGCHC 1 cut(s) 84
MluCI AATT 3 cut(s) 55, 92, 96
MseI TTAA 4 cut(s) 47, 54, 95, 160
PceI AGGCCT 1 cut(s) 126
PfeI GAWTC 1 cut(s) 64
PshBI ATTAAT 2 cut(s) 54, 95
Psp124BI GAGCTC 1 cut(s) 84
PspFI CCCAGC 1 cut(s) 6
PspPI GGNCC 1 cut(s) 21
SacI GAGCTC 1 cut(s) 84
SaqAI TTAA 4 cut(s) 47, 54, 95, 160
Sau96I GGNCC 1 cut(s) 21
SduI GDGCHC 1 cut(s) 84
SetI ASST 3 cut(s) 37, 84, 149
SgeI CNNG 6 cut(s) 19, 32, 80, 97, 139, 152
Sse9I AATT 3 cut(s) 55, 92, 96
SseBI AGGCCT 1 cut(s) 126
SstI GAGCTC 1 cut(s) 84
StuI AGGCCT 1 cut(s) 126
TasI AATT 3 cut(s) 55, 92, 96
TfiI GAWTC 1 cut(s) 64
Tru1I TTAA 4 cut(s) 47, 54, 95, 160
Tru9I TTAA 4 cut(s) 47, 54, 95, 160
VspI ATTAAT 2 cut(s) 54, 95
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.