Long chain acyl-CoA synthetase
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g25602 |
| rosa_chinensis | RchiOBHm_Chr1g0348871 RchiOBHm_Chr2g0119471 RchiOBHm_Chr2g0121481 RchiOBHm_Chr2g0141001 RchiOBHm_Chr4g0431321 RchiOBHm_Chr6g0261061 RchiOBHm_Chr6g0288641 |
| rosa_multiflora | Rmu_sc0001843.1_g000007 Rmu_sc0005816.1_g000036 |
| rosa_roxburghii | Rroxscaffold_7G00156510 Rroxscaffold_7G00166100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 14 |
| AciI | CCGC | 1 cut(s) | 348 |
| AclWI | GGATC | 1 cut(s) | 228 |
| AfaI | GTAC | 1 cut(s) | 309 |
| AgsI | TTSAA | 2 cut(s) | 125, 289 |
| AluBI | AGCT | 1 cut(s) | 371 |
| AluI | AGCT | 1 cut(s) | 371 |
| Alw26I | GTCTC | 1 cut(s) | 96 |
| AlwI | GGATC | 1 cut(s) | 228 |
| Aor13HI | TCCGGA | 1 cut(s) | 14 |
| ApeKI | GCWGC | 2 cut(s) | 37, 160 |
| AsuHPI | GGTGA | 1 cut(s) | 110 |
| BbvI | GCAGC | 2 cut(s) | 49, 172 |
| BccI | CCATC | 1 cut(s) | 185 |
| BcoDI | GTCTC | 1 cut(s) | 96 |
| BfaI | CTAG | 1 cut(s) | 372 |
| BfmI | CTRYAG | 1 cut(s) | 363 |
| BisI | GCNGC | 3 cut(s) | 38, 161, 349 |
| BlsI | GCNGC | 3 cut(s) | 39, 162, 350 |
| BmsI | GCATC | 1 cut(s) | 286 |
| BpuEI | CTTGAG | 1 cut(s) | 78 |
| BsaBI | GATNNNNATC | 1 cut(s) | 276 |
| BsaJI | CCNNGG | 1 cut(s) | 230 |
| BsaWI | WCCGGW | 1 cut(s) | 14 |
| Bse3DI | GCAATG | 2 cut(s) | 57, 146 |
| Bse8I | GATNNNNATC | 1 cut(s) | 276 |
| BseAI | TCCGGA | 1 cut(s) | 14 |
| BseDI | CCNNGG | 1 cut(s) | 230 |
| BseGI | GGATG | 1 cut(s) | 208 |
| BseJI | GATNNNNATC | 1 cut(s) | 276 |
| BseMI | GCAATG | 2 cut(s) | 57, 146 |
| BseXI | GCAGC | 2 cut(s) | 49, 172 |
| BsiSI | CCGG | 2 cut(s) | 15, 317 |
| BsmAI | GTCTC | 1 cut(s) | 96 |
| Bsp13I | TCCGGA | 1 cut(s) | 14 |
| Bsp143I | GATC | 1 cut(s) | 220 |
| BspACI | CCGC | 1 cut(s) | 348 |
| BspEI | TCCGGA | 1 cut(s) | 14 |
| BspPI | GGATC | 1 cut(s) | 228 |
| BsrDI | GCAATG | 2 cut(s) | 57, 146 |
| BssECI | CCNNGG | 1 cut(s) | 230 |
| BssMI | GATC | 1 cut(s) | 220 |
| BssT1I | CCWWGG | 1 cut(s) | 230 |
| Bst4CI | ACNGT | 1 cut(s) | 90 |
| BstF5I | GGATG | 1 cut(s) | 208 |
| BstKTI | GATC | 1 cut(s) | 223 |
| BstMAI | GTCTC | 1 cut(s) | 96 |
| BstMBI | GATC | 1 cut(s) | 220 |
| BstSFI | CTRYAG | 1 cut(s) | 363 |
| BstV1I | GCAGC | 2 cut(s) | 49, 172 |
| BstX2I | RGATCY | 1 cut(s) | 220 |
| BstYI | RGATCY | 1 cut(s) | 220 |
| BtgZI | GCGATG | 1 cut(s) | 141 |
| BtsCI | GGATG | 1 cut(s) | 208 |
| Csp6I | GTAC | 1 cut(s) | 308 |
| CviAII | CATG | 3 cut(s) | 262, 292, 340 |
| CviJI | RGCY | 4 cut(s) | 6, 40, 163, 371 |
| CviKI_1 | RGCY | 4 cut(s) | 6, 40, 163, 371 |
| CviQI | GTAC | 1 cut(s) | 308 |
| DpnI | GATC | 1 cut(s) | 222 |
| DpnII | GATC | 1 cut(s) | 220 |
| DraI | TTTAAA | 1 cut(s) | 85 |
| Eco130I | CCWWGG | 1 cut(s) | 230 |
| EcoT14I | CCWWGG | 1 cut(s) | 230 |
| ErhI | CCWWGG | 1 cut(s) | 230 |
| FaeI | CATG | 3 cut(s) | 265, 295, 343 |
| FaiI | YATR | 9 cut(s) | 62, 80, 105, 249, 251, 263, 293, 341, 386 |
| FatI | CATG | 3 cut(s) | 261, 291, 339 |
| FauNDI | CATATG | 1 cut(s) | 249 |
| Fnu4HI | GCNGC | 3 cut(s) | 38, 161, 349 |
| FokI | GGATG | 1 cut(s) | 215 |
| Fsp4HI | GCNGC | 3 cut(s) | 38, 161, 349 |
| FspBI | CTAG | 1 cut(s) | 372 |
| GluI | GCNGC | 3 cut(s) | 38, 161, 349 |
| HapII | CCGG | 2 cut(s) | 15, 317 |
| Hin1II | CATG | 3 cut(s) | 265, 295, 343 |
| HinfI | GANTC | 2 cut(s) | 168, 333 |
| HpaII | CCGG | 2 cut(s) | 15, 317 |
| HphI | GGTGA | 1 cut(s) | 110 |
| Hpy166II | GTNNAC | 2 cut(s) | 197, 308 |
| Hpy188III | TCNNGA | 2 cut(s) | 15, 188 |
| Hpy8I | GTNNAC | 2 cut(s) | 197, 308 |
| HpyCH4III | ACNGT | 1 cut(s) | 90 |
| HpyCH4V | TGCA | 1 cut(s) | 139 |
| Hsp92II | CATG | 3 cut(s) | 265, 295, 343 |
| Kpn2I | TCCGGA | 1 cut(s) | 14 |
| Kzo9I | GATC | 1 cut(s) | 220 |
| LmnI | GCTCC | 1 cut(s) | 47 |
| LpnPI | CCDG | 4 cut(s) | 28, 52, 185, 330 |
| Lsp1109I | GCAGC | 2 cut(s) | 49, 172 |
| LweI | GCATC | 1 cut(s) | 286 |
| MaeI | CTAG | 1 cut(s) | 372 |
| MalI | GATC | 1 cut(s) | 222 |
| MboI | GATC | 1 cut(s) | 220 |
| MboII | GAAGA | 2 cut(s) | 215, 218 |
| MflI | RGATCY | 1 cut(s) | 220 |
| MluCI | AATT | 1 cut(s) | 120 |
| MlyI | GAGTC | 1 cut(s) | 162 |
| MnlI | CCTC | 4 cut(s) | 11, 199, 210, 348 |
| MroI | TCCGGA | 1 cut(s) | 14 |
| MseI | TTAA | 1 cut(s) | 84 |
| MspI | CCGG | 2 cut(s) | 15, 317 |
| NdeI | CATATG | 1 cut(s) | 249 |
| NdeII | GATC | 1 cut(s) | 220 |
| NlaIII | CATG | 3 cut(s) | 265, 295, 343 |
| PfeI | GAWTC | 1 cut(s) | 333 |
| PkrI | GCNGC | 3 cut(s) | 39, 162, 350 |
| PleI | GAGTC | 1 cut(s) | 162 |
| PpsI | GAGTC | 1 cut(s) | 162 |
| PsuI | RGATCY | 1 cut(s) | 220 |
| RsaI | GTAC | 1 cut(s) | 309 |
| RsaNI | GTAC | 1 cut(s) | 308 |
| SaqAI | TTAA | 1 cut(s) | 84 |
| SatI | GCNGC | 3 cut(s) | 38, 161, 349 |
| Sau3AI | GATC | 1 cut(s) | 220 |
| SchI | GAGTC | 1 cut(s) | 162 |
| SetI | ASST | 5 cut(s) | 100, 210, 359, 373, 377 |
| SfaNI | GCATC | 1 cut(s) | 286 |
| SfcI | CTRYAG | 1 cut(s) | 363 |
| SmlI | CTYRAG | 1 cut(s) | 93 |
| SmoI | CTYRAG | 1 cut(s) | 93 |
| Sse9I | AATT | 1 cut(s) | 120 |
| SsiI | CCGC | 1 cut(s) | 348 |
| SspMI | CTAG | 1 cut(s) | 372 |
| StyI | CCWWGG | 1 cut(s) | 230 |
| TaaI | ACNGT | 1 cut(s) | 90 |
| TasI | AATT | 1 cut(s) | 120 |
| TatI | WGTACW | 1 cut(s) | 307 |
| TauI | GCSGC | 1 cut(s) | 351 |
| TfiI | GAWTC | 1 cut(s) | 333 |
| Tru1I | TTAA | 1 cut(s) | 84 |
| Tru9I | TTAA | 1 cut(s) | 84 |
| TseI | GCWGC | 2 cut(s) | 37, 160 |
| TspDTI | ATGAA | 2 cut(s) | 68, 236 |
| XspI | CTAG | 1 cut(s) | 372 |