RchiOBHm_Chr2g0154931

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
71919947 .. 71920601
655 bp
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UTR
Exon/CDS
Intron
PRQ52386

Sequence Viewer

Length: 150 bp
ATGACAGGTGTACCCTCAATCCCCGGAATAGAACGATCCCTACTTACTTATATTACTAACGACATTTCAGGGTTAAATTATGCGCTCGCTTCGAGCGCATCAGAATTCTCAAGCTATTATGATGATTTCATTGACAAATTTGAAAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

49

Amino Acids

5.41

Weight (kDa)

4.05

Isoelectric Point (pI)

48.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 30
AcsI RAATTY 2 cut(s) 104, 137
AfaI GTAC 1 cut(s) 12
AgsI TTSAA 1 cut(s) 143
AluBI AGCT 1 cut(s) 114
AluI AGCT 1 cut(s) 114
AlwI GGATC 1 cut(s) 30
ApoI RAATTY 2 cut(s) 104, 137
AspLEI GCGC 2 cut(s) 85, 98
AsuC2I CCSGG 1 cut(s) 24
BaeI ACNNNNGTAYC 1 cut(s) 27
BcnI CCSGG 1 cut(s) 24
Bme1390I CCNGG 1 cut(s) 24
BmrFI CCNGG 1 cut(s) 24
BmsI GCATC 1 cut(s) 107
BpuEI CTTGAG 1 cut(s) 94
BpuMI CCSGG 1 cut(s) 24
BsaJI CCNNGG 1 cut(s) 22
BseDI CCNNGG 1 cut(s) 22
BsiSI CCGG 1 cut(s) 24
Bsp143I GATC 1 cut(s) 35
BspPI GGATC 1 cut(s) 30
BssECI CCNNGG 1 cut(s) 22
BssMI GATC 1 cut(s) 35
BstC8I GCNNGC 1 cut(s) 87
BstHHI GCGC 2 cut(s) 85, 98
BstKTI GATC 1 cut(s) 38
BstMBI GATC 1 cut(s) 35
BstMWI GCNNNNNNNGC 1 cut(s) 95
BstSCI CCNGG 1 cut(s) 22
Cac8I GCNNGC 1 cut(s) 87
CfoI GCGC 2 cut(s) 85, 98
Csp6I GTAC 1 cut(s) 11
CviJI RGCY 1 cut(s) 114
CviKI_1 RGCY 1 cut(s) 114
CviQI GTAC 1 cut(s) 11
DpnI GATC 1 cut(s) 37
DpnII GATC 1 cut(s) 35
EcoRI GAATTC 1 cut(s) 104
FaiI YATR 3 cut(s) 51, 81, 120
GlaI GCGC 2 cut(s) 84, 97
HapII CCGG 1 cut(s) 24
HhaI GCGC 2 cut(s) 85, 98
Hin6I GCGC 2 cut(s) 83, 96
HinP1I GCGC 2 cut(s) 83, 96
HpaII CCGG 1 cut(s) 24
Hpy166II GTNNAC 1 cut(s) 11
Hpy188I TCNGA 1 cut(s) 103
Hpy8I GTNNAC 1 cut(s) 11
HpyF10VI GCNNNNNNNGC 1 cut(s) 95
HspAI GCGC 2 cut(s) 83, 96
Kzo9I GATC 1 cut(s) 35
LpnPI CCDG 2 cut(s) 37, 54
LweI GCATC 1 cut(s) 107
MalI GATC 1 cut(s) 37
MboI GATC 1 cut(s) 35
MluCI AATT 3 cut(s) 76, 104, 137
MnlI CCTC 1 cut(s) 25
MseI TTAA 1 cut(s) 74
MspI CCGG 1 cut(s) 24
MspR9I CCNGG 1 cut(s) 24
MwoI GCNNNNNNNGC 1 cut(s) 95
NciI CCSGG 1 cut(s) 24
NdeII GATC 1 cut(s) 35
PsrI GAACNNNNNNTAC 2 cut(s) 24, 56
RsaI GTAC 1 cut(s) 12
RsaNI GTAC 1 cut(s) 11
SaqAI TTAA 1 cut(s) 74
Sau3AI GATC 1 cut(s) 35
ScrFI CCNGG 1 cut(s) 24
SetI ASST 2 cut(s) 10, 116
SfaNI GCATC 1 cut(s) 107
SgeI CNNG 7 cut(s) 18, 35, 36, 81, 98, 105, 123
SmlI CTYRAG 1 cut(s) 109
SmoI CTYRAG 1 cut(s) 109
Sse9I AATT 3 cut(s) 76, 104, 137
StyD4I CCNGG 1 cut(s) 22
TaqI TCGA 1 cut(s) 92
TasI AATT 3 cut(s) 76, 104, 137
Tru1I TTAA 1 cut(s) 74
Tru9I TTAA 1 cut(s) 74
TspDTI ATGAA 1 cut(s) 118
XapI RAATTY 2 cut(s) 104, 137
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.