Zinc finger BED domain-containing protein RICESLEEPER
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0360411 RchiOBHm_Chr3g0479201 RchiOBHm_Chr5g0016291 RchiOBHm_Chr5g0071091 |
| rosa_laevigata | RLG00000004355 RLG00000012312 RLG00000019508 RLG00000019971 RLG00000036427 |
| rosa_multiflora | Rmu_sc0011390.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00009370 Rroxscaffold_2G00107450 |
| rosa_rugosa | Rorug01G0201800 |
| rosa_samantha | Rh1BG230500 Rh1CG077400 Rh2DG192900 Rh4BG427800 Rh7AG180300 Rh7CG180400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 120 |
| AgsI | TTSAA | 2 cut(s) | 106, 152 |
| AjnI | CCWGG | 1 cut(s) | 37 |
| AluBI | AGCT | 2 cut(s) | 116, 143 |
| AluI | AGCT | 2 cut(s) | 116, 143 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 70 |
| AspS9I | GGNCC | 1 cut(s) | 158 |
| AsuHPI | GGTGA | 1 cut(s) | 92 |
| AvaII | GGWCC | 1 cut(s) | 158 |
| BciT130I | CCWGG | 1 cut(s) | 39 |
| BfmI | CTRYAG | 2 cut(s) | 111, 164 |
| Bme1390I | CCNGG | 1 cut(s) | 39 |
| Bme18I | GGWCC | 1 cut(s) | 158 |
| BmgT120I | GGNCC | 1 cut(s) | 158 |
| BmiI | GGNNCC | 2 cut(s) | 159, 160 |
| BmrFI | CCNGG | 1 cut(s) | 39 |
| BmsI | GCATC | 1 cut(s) | 126 |
| BsaBI | GATNNNNATC | 1 cut(s) | 60 |
| Bse8I | GATNNNNATC | 1 cut(s) | 60 |
| BseBI | CCWGG | 1 cut(s) | 39 |
| BseJI | GATNNNNATC | 1 cut(s) | 60 |
| BslFI | GGGAC | 1 cut(s) | 144 |
| BsmFI | GGGAC | 1 cut(s) | 144 |
| BspLI | GGNNCC | 2 cut(s) | 159, 160 |
| Bst2UI | CCWGG | 1 cut(s) | 39 |
| BstC8I | GCNNGC | 1 cut(s) | 141 |
| BstNI | CCWGG | 1 cut(s) | 39 |
| BstSCI | CCNGG | 1 cut(s) | 37 |
| BstSFI | CTRYAG | 2 cut(s) | 111, 164 |
| Cac8I | GCNNGC | 1 cut(s) | 141 |
| CaiI | CAGNNNCTG | 1 cut(s) | 70 |
| Cfr13I | GGNCC | 1 cut(s) | 158 |
| CviAII | CATG | 1 cut(s) | 24 |
| CviJI | RGCY | 3 cut(s) | 110, 116, 143 |
| CviKI_1 | RGCY | 3 cut(s) | 110, 116, 143 |
| Eco47I | GGWCC | 1 cut(s) | 158 |
| EcoO109I | RGGNCCY | 1 cut(s) | 158 |
| EcoRII | CCWGG | 1 cut(s) | 37 |
| FaeI | CATG | 1 cut(s) | 27 |
| FaiI | YATR | 3 cut(s) | 14, 25, 120 |
| FaqI | GGGAC | 1 cut(s) | 144 |
| FatI | CATG | 1 cut(s) | 23 |
| Hin1II | CATG | 1 cut(s) | 27 |
| HindIII | AAGCTT | 1 cut(s) | 141 |
| HinfI | GANTC | 1 cut(s) | 61 |
| HphI | GGTGA | 1 cut(s) | 92 |
| Hpy188I | TCNGA | 1 cut(s) | 66 |
| Hpy188III | TCNNGA | 1 cut(s) | 125 |
| HpyAV | CCTTC | 2 cut(s) | 36, 100 |
| HpyCH4V | TGCA | 2 cut(s) | 27, 139 |
| Hsp92II | CATG | 1 cut(s) | 27 |
| KflI | GGGWCCC | 1 cut(s) | 158 |
| LpnPI | CCDG | 3 cut(s) | 24, 51, 138 |
| LweI | GCATC | 1 cut(s) | 126 |
| MluCI | AATT | 1 cut(s) | 97 |
| MnlI | CCTC | 1 cut(s) | 39 |
| MspR9I | CCNGG | 1 cut(s) | 39 |
| MvaI | CCWGG | 1 cut(s) | 39 |
| NlaIII | CATG | 1 cut(s) | 27 |
| NlaIV | GGNNCC | 2 cut(s) | 159, 160 |
| PfeI | GAWTC | 1 cut(s) | 61 |
| PfoI | TCCNGGA | 1 cut(s) | 37 |
| PpuMI | RGGWCCY | 1 cut(s) | 158 |
| PsiI | TTATAA | 1 cut(s) | 120 |
| Psp5II | RGGWCCY | 1 cut(s) | 158 |
| Psp6I | CCWGG | 1 cut(s) | 37 |
| PspGI | CCWGG | 1 cut(s) | 37 |
| PspN4I | GGNNCC | 2 cut(s) | 159, 160 |
| PspPI | GGNCC | 1 cut(s) | 158 |
| PspPPI | RGGWCCY | 1 cut(s) | 158 |
| PstNI | CAGNNNCTG | 1 cut(s) | 70 |
| Sau96I | GGNCC | 1 cut(s) | 158 |
| ScrFI | CCNGG | 1 cut(s) | 39 |
| SetI | ASST | 2 cut(s) | 118, 145 |
| SfaNI | GCATC | 1 cut(s) | 126 |
| SfcI | CTRYAG | 2 cut(s) | 111, 164 |
| SgeI | CNNG | 8 cut(s) | 36, 40, 50, 51, 86, 137, 152, 156 |
| SinI | GGWCC | 1 cut(s) | 158 |
| Sse9I | AATT | 1 cut(s) | 97 |
| StyD4I | CCNGG | 1 cut(s) | 37 |
| TaqI | TCGA | 1 cut(s) | 54 |
| TasI | AATT | 1 cut(s) | 97 |
| TfiI | GAWTC | 1 cut(s) | 61 |
| TspDTI | ATGAA | 1 cut(s) | 90 |
| VpaK11BI | GGWCC | 1 cut(s) | 158 |