Crossover junction endonuclease
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0391951 |
| rosa_laevigata | RLG00000005424 |
| rosa_multiflora | Rmu_sc0014416.1_g000002 |
| rosa_samantha | Rh1AG130400 Rh1CG124200 Rh3AG216000 Rh3CG245100 Rh3DG243000 Rh4AG101100 Rh4AG173000 Rh4BG034200 Rh5AG502500 Rh5BG451900 Rh5CG474200 Rh5DG466800 |
| rosa_wichuraiana | Rw5G028890 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 7 |
| AciI | CCGC | 1 cut(s) | 7 |
| AfaI | GTAC | 2 cut(s) | 56, 391 |
| AfeI | AGCGCT | 1 cut(s) | 45 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 22, 199 |
| AflIII | ACRYGT | 2 cut(s) | 57, 376 |
| AgeI | ACCGGT | 1 cut(s) | 15 |
| AgsI | TTSAA | 2 cut(s) | 119, 223 |
| AluBI | AGCT | 1 cut(s) | 226 |
| AluI | AGCT | 1 cut(s) | 226 |
| Alw21I | GWGCWC | 1 cut(s) | 32 |
| Aor51HI | AGCGCT | 1 cut(s) | 45 |
| AsiGI | ACCGGT | 1 cut(s) | 15 |
| AspLEI | GCGC | 1 cut(s) | 46 |
| Bbv12I | GWGCWC | 1 cut(s) | 32 |
| BclI | TGATCA | 1 cut(s) | 349 |
| BfoI | RGCGCY | 1 cut(s) | 47 |
| BisI | GCNGC | 1 cut(s) | 8 |
| BlsI | GCNGC | 1 cut(s) | 9 |
| BsaAI | YACGTR | 1 cut(s) | 393 |
| BsaJI | CCNNGG | 2 cut(s) | 96, 132 |
| BsaWI | WCCGGW | 1 cut(s) | 15 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 22, 199 |
| Bse118I | RCCGGY | 1 cut(s) | 15 |
| BseDI | CCNNGG | 2 cut(s) | 96, 132 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 22, 199 |
| BshTI | ACCGGT | 1 cut(s) | 15 |
| BsiHKAI | GWGCWC | 1 cut(s) | 32 |
| BsiSI | CCGG | 1 cut(s) | 16 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 22, 199 |
| Bsp1286I | GDGCHC | 1 cut(s) | 32 |
| Bsp143I | GATC | 1 cut(s) | 349 |
| BspACI | CCGC | 1 cut(s) | 7 |
| BsrBI | CCGCTC | 1 cut(s) | 7 |
| BsrFI | RCCGGY | 1 cut(s) | 15 |
| BssAI | RCCGGY | 1 cut(s) | 15 |
| BssECI | CCNNGG | 2 cut(s) | 96, 132 |
| BssMI | GATC | 1 cut(s) | 349 |
| BssT1I | CCWWGG | 2 cut(s) | 96, 132 |
| BstBAI | YACGTR | 1 cut(s) | 393 |
| BstC8I | GCNNGC | 1 cut(s) | 48 |
| BstDEI | CTNAG | 1 cut(s) | 159 |
| BstH2I | RGCGCY | 1 cut(s) | 47 |
| BstHHI | GCGC | 1 cut(s) | 46 |
| BstKTI | GATC | 1 cut(s) | 352 |
| BstMBI | GATC | 1 cut(s) | 349 |
| BstNSI | RCATGY | 2 cut(s) | 61, 380 |
| Cac8I | GCNNGC | 1 cut(s) | 48 |
| CfoI | GCGC | 1 cut(s) | 46 |
| Cfr10I | RCCGGY | 1 cut(s) | 15 |
| Csp6I | GTAC | 2 cut(s) | 55, 390 |
| CspAI | ACCGGT | 1 cut(s) | 15 |
| CviAII | CATG | 3 cut(s) | 58, 377, 387 |
| CviJI | RGCY | 2 cut(s) | 94, 226 |
| CviKI_1 | RGCY | 2 cut(s) | 94, 226 |
| CviQI | GTAC | 2 cut(s) | 55, 390 |
| DdeI | CTNAG | 1 cut(s) | 159 |
| DpnI | GATC | 1 cut(s) | 351 |
| DpnII | GATC | 1 cut(s) | 349 |
| Eco130I | CCWWGG | 2 cut(s) | 96, 132 |
| Eco47III | AGCGCT | 1 cut(s) | 45 |
| EcoT14I | CCWWGG | 2 cut(s) | 96, 132 |
| ErhI | CCWWGG | 2 cut(s) | 96, 132 |
| FaeI | CATG | 3 cut(s) | 61, 380, 390 |
| FaiI | YATR | 8 cut(s) | 59, 139, 230, 313, 338, 340, 378, 388 |
| FatI | CATG | 3 cut(s) | 57, 376, 386 |
| FauNDI | CATATG | 1 cut(s) | 338 |
| FbaI | TGATCA | 1 cut(s) | 349 |
| Fnu4HI | GCNGC | 1 cut(s) | 8 |
| Fsp4HI | GCNGC | 1 cut(s) | 8 |
| GlaI | GCGC | 1 cut(s) | 45 |
| GluI | GCNGC | 1 cut(s) | 8 |
| HaeII | RGCGCY | 1 cut(s) | 47 |
| HapII | CCGG | 1 cut(s) | 16 |
| HhaI | GCGC | 1 cut(s) | 46 |
| Hin1II | CATG | 3 cut(s) | 61, 380, 390 |
| Hin6I | GCGC | 1 cut(s) | 44 |
| HinP1I | GCGC | 1 cut(s) | 44 |
| HindIII | AAGCTT | 1 cut(s) | 224 |
| HinfI | GANTC | 3 cut(s) | 102, 124, 163 |
| HpaII | CCGG | 1 cut(s) | 16 |
| Hpy166II | GTNNAC | 1 cut(s) | 367 |
| Hpy188I | TCNGA | 2 cut(s) | 34, 265 |
| Hpy8I | GTNNAC | 1 cut(s) | 367 |
| HpyCH4IV | ACGT | 1 cut(s) | 392 |
| HpyCH4V | TGCA | 2 cut(s) | 153, 232 |
| HpyF3I | CTNAG | 1 cut(s) | 159 |
| HpySE526I | ACGT | 1 cut(s) | 392 |
| Hsp92II | CATG | 3 cut(s) | 61, 380, 390 |
| HspAI | GCGC | 1 cut(s) | 44 |
| Ksp22I | TGATCA | 1 cut(s) | 349 |
| Kzo9I | GATC | 1 cut(s) | 349 |
| LmnI | GCTCC | 2 cut(s) | 4, 35 |
| LpnPI | CCDG | 7 cut(s) | 29, 32, 59, 180, 240, 282, 347 |
| MaeII | ACGT | 1 cut(s) | 392 |
| MaeIII | GTNAC | 1 cut(s) | 277 |
| MalI | GATC | 1 cut(s) | 351 |
| MbiI | CCGCTC | 1 cut(s) | 7 |
| MboI | GATC | 1 cut(s) | 349 |
| MboII | GAAGA | 2 cut(s) | 284, 301 |
| MhlI | GDGCHC | 1 cut(s) | 32 |
| MluCI | AATT | 1 cut(s) | 326 |
| MlyI | GAGTC | 1 cut(s) | 118 |
| MnlI | CCTC | 1 cut(s) | 188 |
| MseI | TTAA | 1 cut(s) | 171 |
| MslI | CAYNNNNRTG | 1 cut(s) | 391 |
| MspI | CCGG | 1 cut(s) | 16 |
| NdeI | CATATG | 1 cut(s) | 338 |
| NdeII | GATC | 1 cut(s) | 349 |
| NlaIII | CATG | 3 cut(s) | 61, 380, 390 |
| NspI | RCATGY | 2 cut(s) | 61, 380 |
| PciI | ACATGT | 2 cut(s) | 57, 376 |
| PfeI | GAWTC | 2 cut(s) | 102, 163 |
| PinAI | ACCGGT | 1 cut(s) | 15 |
| PkrI | GCNGC | 1 cut(s) | 9 |
| PleI | GAGTC | 1 cut(s) | 118 |
| PpsI | GAGTC | 1 cut(s) | 118 |
| Ppu21I | YACGTR | 1 cut(s) | 393 |
| PscI | ACATGT | 2 cut(s) | 57, 376 |
| RsaI | GTAC | 2 cut(s) | 56, 391 |
| RsaNI | GTAC | 2 cut(s) | 55, 390 |
| RseI | CAYNNNNRTG | 1 cut(s) | 391 |
| SaqAI | TTAA | 1 cut(s) | 171 |
| SatI | GCNGC | 1 cut(s) | 8 |
| Sau3AI | GATC | 1 cut(s) | 349 |
| SchI | GAGTC | 1 cut(s) | 118 |
| SduI | GDGCHC | 1 cut(s) | 32 |
| SetI | ASST | 3 cut(s) | 228, 366, 395 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 391 |
| Sse9I | AATT | 1 cut(s) | 326 |
| SsiI | CCGC | 1 cut(s) | 7 |
| StyI | CCWWGG | 2 cut(s) | 96, 132 |
| TaiI | ACGT | 1 cut(s) | 395 |
| TasI | AATT | 1 cut(s) | 326 |
| TatI | WGTACW | 1 cut(s) | 54 |
| TauI | GCSGC | 1 cut(s) | 10 |
| TfiI | GAWTC | 2 cut(s) | 102, 163 |
| Tru1I | TTAA | 1 cut(s) | 171 |
| Tru9I | TTAA | 1 cut(s) | 171 |
| TspDTI | ATGAA | 2 cut(s) | 54, 375 |
| XceI | RCATGY | 2 cut(s) | 61, 380 |