Crossover junction endonuclease
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0391951 |
| rosa_laevigata | RLG00000005424 |
| rosa_multiflora | Rmu_sc0014416.1_g000002 |
| rosa_samantha | Rh1AG130400 Rh1CG124200 Rh3AG216000 Rh3CG245100 Rh3DG243000 Rh4AG101100 Rh4AG173000 Rh4BG034200 Rh5AG502500 Rh5BG451900 Rh5CG474200 Rh5DG466800 |
| rosa_wichuraiana | Rw5G028890 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 160 |
| AciI | CCGC | 2 cut(s) | 160, 169 |
| AfaI | GTAC | 1 cut(s) | 209 |
| AfeI | AGCGCT | 1 cut(s) | 198 |
| AflIII | ACRYGT | 1 cut(s) | 210 |
| AgsI | TTSAA | 4 cut(s) | 77, 83, 153, 272 |
| AluBI | AGCT | 1 cut(s) | 60 |
| AluI | AGCT | 1 cut(s) | 60 |
| Alw21I | GWGCWC | 1 cut(s) | 185 |
| Alw26I | GTCTC | 1 cut(s) | 121 |
| Aor51HI | AGCGCT | 1 cut(s) | 198 |
| AoxI | GGCC | 1 cut(s) | 90 |
| ApeKI | GCWGC | 2 cut(s) | 54, 57 |
| AspLEI | GCGC | 1 cut(s) | 199 |
| AspS9I | GGNCC | 1 cut(s) | 90 |
| AsuHPI | GGTGA | 1 cut(s) | 24 |
| Bbv12I | GWGCWC | 1 cut(s) | 185 |
| BbvI | GCAGC | 2 cut(s) | 66, 69 |
| BccI | CCATC | 1 cut(s) | 169 |
| BcoDI | GTCTC | 1 cut(s) | 121 |
| BfoI | RGCGCY | 1 cut(s) | 200 |
| BisI | GCNGC | 3 cut(s) | 55, 58, 161 |
| BlsI | GCNGC | 3 cut(s) | 56, 59, 162 |
| BmgT120I | GGNCC | 1 cut(s) | 90 |
| BmiI | GGNNCC | 1 cut(s) | 91 |
| BsaJI | CCNNGG | 1 cut(s) | 285 |
| BseDI | CCNNGG | 1 cut(s) | 285 |
| BseMII | CTCAG | 1 cut(s) | 114 |
| BseXI | GCAGC | 2 cut(s) | 66, 69 |
| BshFI | GGCC | 1 cut(s) | 92 |
| BsiHKAI | GWGCWC | 1 cut(s) | 185 |
| BsmAI | GTCTC | 1 cut(s) | 121 |
| BsnI | GGCC | 1 cut(s) | 92 |
| Bsp1286I | GDGCHC | 1 cut(s) | 185 |
| BspACI | CCGC | 2 cut(s) | 160, 169 |
| BspANI | GGCC | 1 cut(s) | 92 |
| BspCNI | CTCAG | 1 cut(s) | 115 |
| BspLI | GGNNCC | 1 cut(s) | 91 |
| BsrBI | CCGCTC | 1 cut(s) | 160 |
| BssECI | CCNNGG | 1 cut(s) | 285 |
| BssT1I | CCWWGG | 1 cut(s) | 285 |
| Bst4CI | ACNGT | 1 cut(s) | 115 |
| BstC8I | GCNNGC | 2 cut(s) | 136, 201 |
| BstDEI | CTNAG | 2 cut(s) | 123, 312 |
| BstH2I | RGCGCY | 1 cut(s) | 200 |
| BstHHI | GCGC | 1 cut(s) | 199 |
| BstMAI | GTCTC | 1 cut(s) | 121 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 51, 166 |
| BstNSI | RCATGY | 1 cut(s) | 214 |
| BstV1I | GCAGC | 2 cut(s) | 66, 69 |
| BsuRI | GGCC | 1 cut(s) | 92 |
| Cac8I | GCNNGC | 2 cut(s) | 136, 201 |
| CfoI | GCGC | 1 cut(s) | 199 |
| Cfr13I | GGNCC | 1 cut(s) | 90 |
| Csp6I | GTAC | 1 cut(s) | 208 |
| CviAII | CATG | 1 cut(s) | 211 |
| CviJI | RGCY | 4 cut(s) | 60, 92, 134, 247 |
| CviKI_1 | RGCY | 4 cut(s) | 60, 92, 134, 247 |
| CviQI | GTAC | 1 cut(s) | 208 |
| DdeI | CTNAG | 2 cut(s) | 123, 312 |
| Eco130I | CCWWGG | 1 cut(s) | 285 |
| Eco47III | AGCGCT | 1 cut(s) | 198 |
| EcoO109I | RGGNCCY | 1 cut(s) | 90 |
| EcoT14I | CCWWGG | 1 cut(s) | 285 |
| ErhI | CCWWGG | 1 cut(s) | 285 |
| FaeI | CATG | 1 cut(s) | 214 |
| FaiI | YATR | 4 cut(s) | 40, 49, 212, 292 |
| FatI | CATG | 1 cut(s) | 210 |
| Fnu4HI | GCNGC | 3 cut(s) | 55, 58, 161 |
| Fsp4HI | GCNGC | 3 cut(s) | 55, 58, 161 |
| GlaI | GCGC | 1 cut(s) | 198 |
| GluI | GCNGC | 3 cut(s) | 55, 58, 161 |
| HaeII | RGCGCY | 1 cut(s) | 200 |
| HaeIII | GGCC | 1 cut(s) | 92 |
| HhaI | GCGC | 1 cut(s) | 199 |
| Hin1II | CATG | 1 cut(s) | 214 |
| Hin6I | GCGC | 1 cut(s) | 197 |
| HinP1I | GCGC | 1 cut(s) | 197 |
| HinfI | GANTC | 5 cut(s) | 23, 149, 255, 277, 316 |
| HphI | GGTGA | 1 cut(s) | 24 |
| Hpy166II | GTNNAC | 1 cut(s) | 103 |
| Hpy188I | TCNGA | 2 cut(s) | 187, 262 |
| Hpy188III | TCNNGA | 1 cut(s) | 146 |
| Hpy8I | GTNNAC | 1 cut(s) | 103 |
| HpyCH4III | ACNGT | 1 cut(s) | 115 |
| HpyCH4V | TGCA | 1 cut(s) | 306 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 51, 166 |
| HpyF3I | CTNAG | 2 cut(s) | 123, 312 |
| Hsp92II | CATG | 1 cut(s) | 214 |
| HspAI | GCGC | 1 cut(s) | 197 |
| LmnI | GCTCC | 3 cut(s) | 65, 157, 188 |
| LpnPI | CCDG | 4 cut(s) | 148, 185, 212, 333 |
| Lsp1109I | GCAGC | 2 cut(s) | 66, 69 |
| MbiI | CCGCTC | 1 cut(s) | 160 |
| MhlI | GDGCHC | 1 cut(s) | 185 |
| MlyI | GAGTC | 1 cut(s) | 271 |
| MnlI | CCTC | 1 cut(s) | 341 |
| MseI | TTAA | 1 cut(s) | 324 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 51, 166 |
| NlaIII | CATG | 1 cut(s) | 214 |
| NlaIV | GGNNCC | 1 cut(s) | 91 |
| NspI | RCATGY | 1 cut(s) | 214 |
| PciI | ACATGT | 1 cut(s) | 210 |
| PfeI | GAWTC | 4 cut(s) | 23, 149, 255, 316 |
| PkrI | GCNGC | 3 cut(s) | 56, 59, 162 |
| PleI | GAGTC | 1 cut(s) | 271 |
| PpsI | GAGTC | 1 cut(s) | 271 |
| PscI | ACATGT | 1 cut(s) | 210 |
| PspN4I | GGNNCC | 1 cut(s) | 91 |
| PspPI | GGNCC | 1 cut(s) | 90 |
| RsaI | GTAC | 1 cut(s) | 209 |
| RsaNI | GTAC | 1 cut(s) | 208 |
| SaqAI | TTAA | 1 cut(s) | 324 |
| SatI | GCNGC | 3 cut(s) | 55, 58, 161 |
| Sau96I | GGNCC | 1 cut(s) | 90 |
| SchI | GAGTC | 1 cut(s) | 271 |
| SduI | GDGCHC | 1 cut(s) | 185 |
| SetI | ASST | 1 cut(s) | 62 |
| SsiI | CCGC | 2 cut(s) | 160, 169 |
| StyI | CCWWGG | 1 cut(s) | 285 |
| TaaI | ACNGT | 1 cut(s) | 115 |
| TatI | WGTACW | 1 cut(s) | 207 |
| TauI | GCSGC | 1 cut(s) | 163 |
| TfiI | GAWTC | 4 cut(s) | 23, 149, 255, 316 |
| Tru1I | TTAA | 1 cut(s) | 324 |
| Tru9I | TTAA | 1 cut(s) | 324 |
| TseI | GCWGC | 2 cut(s) | 54, 57 |
| TspDTI | ATGAA | 1 cut(s) | 207 |
| XceI | RCATGY | 1 cut(s) | 214 |