Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001872

Physical Location & Seq

Genomic Coordinates Forward (+)

61243495 .. 61246453

Gene Structure 2959 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ40674

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1443 bp

ATGGTGAAGATCTGTTGCATAGGAGCTGGATATGTTGGTGGGCCTACTATGGCTGTGATTGCCCTTAAGTGCCCAGATATTGAAGTAGCCGTTGTTGACATTTCTGTGCCACGGATCAGTGCCTGGAACAGTGATACTCTCCCCATATATGAGCCTGGCCTTGATGATGTGGTGAAACAGCGCAGAGGAAAGAACCTATTCTTCAGCACTGATGTCGAGAAACATGTTATGGAGGCAGACATTGTCTTTGTTTCAGTCAACACACCTACCAAGACCCAGGGTCTTGGTGCTGGAAAAGCAGCTGATCTTACCTACTGGGAGAGTGCTGCTCGTATGATTGCAGATGTATCAAAGTCTGACAAAATTGTTGTTGAGAAATCAACTGTGCCTGTGAAAACTGCTGAGGCTATTGAAAAGATTCTGACTCACAACAGCAAAGGCATCAACTTCCAAATTCTTTCCAACCCCGAATTCCTTGCTGAGGGAACTGCAATCCAAGACCTTTTCAATCCTGACAGAGTCCTCATTGGAGGTAGGGAAACCCCAGCAGGTGAGAAGGCAATCCAAGAACTCAAGAAGGTTTATGCCCGCTGGGTTCCTGAAGAACAAATTATTTGCTCTAATCTGTGGTCTGCTGAGCTTTCAAAGCTTGCTGCCAATGCCTTCTTGGCACAGAGGATATCTTCTGTCAATGCCATGTCAGCTCTCTGTGAAGCAACTGGTGCAGATGTCACTCAAGTGTCACATGCTGTTGGCAAGGACACAAGAATAGGGCCTAAGTTCTTAAATGCCAGCGTTGGTTTTGGTGGATCTTGCTTCCAGAAGGATATCTTGAACTTGGTATATATCTGTGAGTGCAATGGCCTTCCTGAGGTCGCAAACTACTGGAAACAGGTCATTAAGATTAATGACTACCAGAAGTCCCGGTTTGTCAACCGAGTGGTTTCCTCAATGTTCAACACGGTCTCGGGTAAGAAGATTGCAATTCTGGGATTTGCCTTCAAGAAGGACACTGGTGACACCAGGGAGACCCCAGCCATTGATGTGTGTAAAGGGCTGTTGGGTGACAAGGCCAGGTTGAGCATATACGACCCTCAGGTTAACGAGGAGCAGATCCAGAGGGATCTTGCAATGAAGAAGTTTGATTGGGACCATCCTATTCATCTTCAACCCTTGAGCCCCACTGCTGTGAAGCAAGTTAGTGTAGTCTGGGATGCTTATGCGGCAACAAAGGATGCTCATGGCATTTGCATCCTGACCGAGTGGGATGAATTCAAAAGCCTTGACTACAAGAAGATCTATGATCAGATGCAGAAGCCTGCTTTTGTCTTCGATGGAAGAAATGTTGTTGATGCAGAGAAGCTGAGGCAAATTGGATTTATTGTTTATTCCATTGGAAAGCCCCTCGACGACTGGCTCAAGGACATGCCTGCTATTGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003979 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006022 GO:0006023 GO:0006024 GO:0006065 GO:0006082 GO:0006139 GO:0006725 GO:0006793 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009225 GO:0009226 GO:0009987 GO:0016053 GO:0016491 GO:0016614 GO:0016616 GO:0018130 GO:0019438 GO:0019752 GO:0030203 GO:0034641 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046398 GO:0046483 GO:0055086 GO:0055114 GO:0071704 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00040 ko00053 ko00520 ko01100 map00040 map00053 map00520 map01100

Pfam Domains

Protein Families

UDPG_MGDP_dh UDPG_MGDP_dh_C UDPG_MGDP_dh_N

Protein Analysis

480

Amino Acids

52.95

Weight (kDa)

6.16

Isoelectric Point (pI)

25.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPG_MGDP_dh_N	PF03721	3 - 185	5.3e-65	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
UDPG_MGDP_dh	PF00984	210 - 304	1.2e-32	UDP-glucose/GDP-mannose dehydrogenase family, central domain
UDPG_MGDP_dh_C	PF03720	328 - 451	6.6e-31	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001872)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26570
fragaria_vesca	FvH4_4g30330 FvH4_4g30330 FvH4_4g30330 FvH4_4g30330 FvH4_5g14230 FvH4_5g14230 FvH4_5g14230 FvH4_5g14230
malus_domestica	MD06G1200200.v1.1 MD13G1064400.v1.1 MD14G1209700.v1.1 MD16G1062900.v1.1
prunus_persica	Prupe.1G284300_v2.0.a1 Prupe.5G202800_v2.0.a1
pyrus_communis	pycom06g17680 pycom13g05690 pycom14g17320 pycom16g05500
rosa_chinensis	RchiOBHm_Chr4g0438621 RchiOBHm_Chr7g0182711
rosa_laevigata	RLG00000005108 RLG00000006346
rosa_multiflora	Rmu_co8409269.1_g000001 Rmu_sc0000014.1_g000040 Rmu_sc0006646.1_g000010
rosa_roxburghii	Rroxscaffold_3G00271060 Rroxscaffold_5G00379610
rosa_rugosa	Rorug04G0311900 Rorug06G0449100 Rorug06G0449100 Rorug06G0449200 Rorug06G0449300 Rorug06G0449300 Rorug06G0449400
rosa_samantha	Rh4AG362300 Rh4BG373700 Rh4CG387600 Rh4DG368400 Rh7AG053100 Rh7BG052700 Rh7CG054200 Rh7DG052500
rosa_wichuraiana	Rw0G006700 Rw0G016650 Rw7G004320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	539
Acc36I	ACCTGC	1 cut(s)	539
AciI	CCGC	2 cut(s)	589, 1223
AclWI	GGATC	4 cut(s)	122, 817, 1108, 1131
AcsI	RAATTY	3 cut(s)	453, 470, 1271
AcuI	CTGAAG	2 cut(s)	187, 621
AfiI	CCNNNNNNNGG	2 cut(s)	481, 871
AflII	CTTAAG	1 cut(s)	65
AflIII	ACRYGT	1 cut(s)	223
AgsI	TTSAA	9 cut(s)	83, 413, 508, 645, 835, 958, 1003, 1169, 1276
AhdI	GACNNNNNGTC	1 cut(s)	279
AjnI	CCWGG	5 cut(s)	122, 154, 276, 1022, 1073
AjuI	GAANNNNNNNTTGG	2 cut(s)	455, 487
AleI	CACNNNNGTG	2 cut(s)	737, 1187
AluBI	AGCT	6 cut(s)	26, 302, 640, 649, 704, 1363
AluI	AGCT	6 cut(s)	26, 302, 640, 649, 704, 1363
Alw26I	GTCTC	2 cut(s)	970, 1022
AlwI	GGATC	4 cut(s)	122, 817, 1108, 1131
AlwNI	CAGNNNCTG	1 cut(s)	123
Ama87I	CYCGRG	1 cut(s)	967
AoxI	GGCC	5 cut(s)	41, 157, 773, 862, 1071
ApeKI	GCWGC	3 cut(s)	299, 326, 653
ApoI	RAATTY	3 cut(s)	453, 470, 1271
ArsI	GACNNNNNNTTYG	2 cut(s)	230, 262
AseI	ATTAAT	1 cut(s)	906
Asp700I	GAANNNNTTC	2 cut(s)	197, 417
AspLEI	GCGC	1 cut(s)	183
AspS9I	GGNCC	3 cut(s)	41, 773, 1150
AsuC2I	CCSGG	1 cut(s)	925
AsuHPI	GGTGA	5 cut(s)	16, 184, 563, 1028, 1076
AvaI	CYCGRG	1 cut(s)	967
AvaII	GGWCC	1 cut(s)	1150
AxyI	CCTNAGG	2 cut(s)	870, 1095
BaeGI	GKGCMC	1 cut(s)	74
BanII	GRGCYC	1 cut(s)	1181
BbsI	GAAGAC	1 cut(s)	1321
BbvCI	CCTCAGC	3 cut(s)	402, 480, 1364
BbvI	GCAGC	3 cut(s)	311, 313, 640
BccI	CCATC	2 cut(s)	1161, 1328
BceAI	ACGGC	1 cut(s)	74
BcgI	CGANNNNNNTGC	4 cut(s)	196, 230, 458, 492
BciT130I	CCWGG	5 cut(s)	124, 156, 278, 1024, 1075
BclI	TGATCA	1 cut(s)	1303
BcnI	CCSGG	1 cut(s)	925
BcoDI	GTCTC	2 cut(s)	970, 1022
BfrI	CTTAAG	1 cut(s)	65
BfuAI	ACCTGC	1 cut(s)	539
BglI	GCCNNNNNGGC	1 cut(s)	668
BglII	AGATCT	2 cut(s)	9, 1296
BisI	GCNGC	4 cut(s)	300, 327, 654, 1224
BlpI	GCTNAGC	1 cut(s)	636
BlsI	GCNGC	4 cut(s)	301, 328, 655, 1225
Bme1390I	CCNGG	6 cut(s)	124, 156, 278, 925, 1024, 1075
Bme18I	GGWCC	1 cut(s)	1150
BmeRI	GACNNNNNGTC	1 cut(s)	279
BmeT110I	CYCGRG	1 cut(s)	967
BmgT120I	GGNCC	3 cut(s)	41, 773, 1150
BmiI	GGNNCC	2 cut(s)	597, 1151
BmrFI	CCNGG	6 cut(s)	124, 156, 278, 925, 1024, 1075
BmrI	ACTGGG	1 cut(s)	325
BmsI	GCATC	6 cut(s)	450, 1204, 1225, 1260, 1299, 1342
BmuI	ACTGGG	1 cut(s)	325
BpiI	GAAGAC	1 cut(s)	1321
BplI	GAGNNNNNCTC	2 cut(s)	313, 345
Bpu10I	CCTNAGC	3 cut(s)	402, 480, 1364
Bpu1102I	GCTNAGC	1 cut(s)	636
BpuEI	CTTGAG	4 cut(s)	557, 720, 1195, 1403
BpuMI	CCSGG	1 cut(s)	925
BsaI	GGTCTC	2 cut(s)	970, 1022
BsaJI	CCNNGG	4 cut(s)	110, 276, 277, 1023
Bsc4I	CCNNNNNNNGG	2 cut(s)	481, 871
Bse1I	ACTGG	5 cut(s)	320, 724, 890, 1018, 1418
Bse21I	CCTNAGG	2 cut(s)	870, 1095
Bse3DI	GCAATG	2 cut(s)	865, 1137
BseBI	CCWGG	5 cut(s)	124, 156, 278, 1024, 1075
BseDI	CCNNGG	4 cut(s)	110, 276, 277, 1023
BseGI	GGATG	5 cut(s)	1153, 1219, 1240, 1251, 1273
BseLI	CCNNNNNNNGG	2 cut(s)	481, 871
BseMI	GCAATG	2 cut(s)	865, 1137
BseMII	CTCAG	6 cut(s)	393, 471, 627, 861, 1109, 1355
BseNI	ACTGG	5 cut(s)	320, 724, 890, 1018, 1418
BseRI	GAGGAG	1 cut(s)	1121
BseSI	GKGCMC	1 cut(s)	74
BseXI	GCAGC	3 cut(s)	311, 313, 640
BseYI	CCCAGC	3 cut(s)	544, 591, 1033
BsgI	GTGCAG	1 cut(s)	744
BshFI	GGCC	5 cut(s)	43, 159, 775, 864, 1073
BsiHKCI	CYCGRG	1 cut(s)	967
BsiSI	CCGG	1 cut(s)	925
BslFI	GGGAC	2 cut(s)	907, 1163
BslI	CCNNNNNNNGG	2 cut(s)	481, 871
BsmAI	GTCTC	2 cut(s)	970, 1022
BsmFI	GGGAC	2 cut(s)	907, 1163
BsnI	GGCC	5 cut(s)	43, 159, 775, 864, 1073
Bso31I	GGTCTC	2 cut(s)	970, 1022
BsoBI	CYCGRG	1 cut(s)	967
Bsp1286I	GDGCHC	2 cut(s)	74, 1181
Bsp143I	GATC	8 cut(s)	9, 114, 304, 809, 1113, 1123, 1296, 1303
Bsp1720I	GCTNAGC	1 cut(s)	636
BspACI	CCGC	2 cut(s)	589, 1223
BspANI	GGCC	5 cut(s)	43, 159, 775, 864, 1073
BspCNI	CTCAG	6 cut(s)	394, 472, 628, 862, 1108, 1356
BspLI	GGNNCC	2 cut(s)	597, 1151
BspMI	ACCTGC	1 cut(s)	539
BspPI	GGATC	4 cut(s)	122, 817, 1108, 1131
BspTI	CTTAAG	1 cut(s)	65
BspTNI	GGTCTC	2 cut(s)	970, 1022
BsrDI	GCAATG	2 cut(s)	865, 1137
BsrI	ACTGG	5 cut(s)	320, 724, 890, 1018, 1418
BssECI	CCNNGG	4 cut(s)	110, 276, 277, 1023
BssMI	GATC	8 cut(s)	9, 114, 304, 809, 1113, 1123, 1296, 1303
Bst2UI	CCWGG	5 cut(s)	124, 156, 278, 1024, 1075
Bst4CI	ACNGT	3 cut(s)	131, 385, 964
BstAFI	CTTAAG	1 cut(s)	65
BstAPI	GCANNNNNTGC	1 cut(s)	722
BstC8I	GCNNGC	5 cut(s)	589, 651, 793, 1320, 1431
BstDEI	CTNAG	7 cut(s)	402, 480, 636, 777, 870, 1095, 1364
BstDSI	CCRYGG	1 cut(s)	110
BstENI	CCTNNNNNAGG	2 cut(s)	479, 869
BstF5I	GGATG	5 cut(s)	1153, 1219, 1240, 1251, 1273
BstHHI	GCGC	1 cut(s)	183
BstKTI	GATC	8 cut(s)	12, 117, 307, 812, 1116, 1126, 1299, 1306
BstMAI	GTCTC	2 cut(s)	970, 1022
BstMBI	GATC	8 cut(s)	9, 114, 304, 809, 1113, 1123, 1296, 1303
BstMWI	GCNNNNNNNGC	8 cut(s)	59, 296, 646, 659, 668, 701, 722, 1223
BstNI	CCWGG	5 cut(s)	124, 156, 278, 1024, 1075
BstNSI	RCATGY	3 cut(s)	227, 749, 1429
BstSCI	CCNGG	6 cut(s)	122, 154, 276, 923, 1022, 1073
BstSLI	GKGCMC	1 cut(s)	74
BstV1I	GCAGC	3 cut(s)	311, 313, 640
BstV2I	GAAGAC	1 cut(s)	1321
BstX2I	RGATCY	5 cut(s)	9, 809, 1113, 1123, 1296
BstXI	CCANNNNNNTGG	1 cut(s)	284
BstYI	RGATCY	5 cut(s)	9, 809, 1113, 1123, 1296
Bsu36I	CCTNAGG	2 cut(s)	870, 1095
BsuRI	GGCC	5 cut(s)	43, 159, 775, 864, 1073
BtgI	CCRYGG	1 cut(s)	110
BtsCI	GGATG	5 cut(s)	1153, 1219, 1240, 1251, 1273
BtsI	GCAGTG	1 cut(s)	1182
BtsIMutI	CAGTG	5 cut(s)	124, 136, 207, 1011, 1182
BveI	ACCTGC	1 cut(s)	539
Cac8I	GCNNGC	5 cut(s)	589, 651, 793, 1320, 1431
CaiI	CAGNNNCTG	1 cut(s)	123
CfoI	GCGC	1 cut(s)	183
Cfr13I	GGNCC	3 cut(s)	41, 773, 1150
CviAII	CATG	5 cut(s)	224, 697, 746, 1241, 1426
DdeI	CTNAG	7 cut(s)	402, 480, 636, 777, 870, 1095, 1364
DpnI	GATC	8 cut(s)	11, 116, 306, 811, 1115, 1125, 1298, 1305
DpnII	GATC	8 cut(s)	9, 114, 304, 809, 1113, 1123, 1296, 1303
DriI	GACNNNNNGTC	1 cut(s)	279
Eam1105I	GACNNNNNGTC	1 cut(s)	279
Eco24I	GRGCYC	1 cut(s)	1181
Eco31I	GGTCTC	2 cut(s)	970, 1022
Eco32I	GATATC	2 cut(s)	681, 829
Eco47I	GGWCC	1 cut(s)	1150
Eco57I	CTGAAG	2 cut(s)	187, 621
Eco81I	CCTNAGG	2 cut(s)	870, 1095
Eco88I	CYCGRG	1 cut(s)	967
EcoNI	CCTNNNNNAGG	2 cut(s)	479, 869
EcoO109I	RGGNCCY	1 cut(s)	773
EcoRI	GAATTC	2 cut(s)	470, 1271
EcoRII	CCWGG	5 cut(s)	122, 154, 276, 1022, 1073
EcoRV	GATATC	2 cut(s)	681, 829
EcoT38I	GRGCYC	1 cut(s)	1181
FaeI	CATG	5 cut(s)	227, 700, 749, 1244, 1429
FalI	AAGNNNNNCTT	2 cut(s)	815, 847
FaqI	GGGAC	2 cut(s)	907, 1163
FatI	CATG	5 cut(s)	223, 696, 745, 1240, 1425
FauI	CCCGC	1 cut(s)	596
FbaI	TGATCA	1 cut(s)	1303
Fnu4HI	GCNGC	4 cut(s)	300, 327, 654, 1224
FokI	GGATG	5 cut(s)	1140, 1226, 1238, 1247, 1280
FriOI	GRGCYC	1 cut(s)	1181
Fsp4HI	GCNGC	4 cut(s)	300, 327, 654, 1224
GlaI	GCGC	1 cut(s)	182
GluI	GCNGC	4 cut(s)	300, 327, 654, 1224
GsaI	CCCAGC	3 cut(s)	548, 595, 1037
HaeIII	GGCC	5 cut(s)	43, 159, 775, 864, 1073
HapII	CCGG	1 cut(s)	925
HhaI	GCGC	1 cut(s)	183
Hin1II	CATG	5 cut(s)	227, 700, 749, 1244, 1429
Hin6I	GCGC	1 cut(s)	181
HinP1I	GCGC	1 cut(s)	181
HincII	GTYRAC	4 cut(s)	97, 259, 934, 1102
HindII	GTYRAC	4 cut(s)	97, 259, 934, 1102
HindIII	AAGCTT	1 cut(s)	647
HinfI	GANTC	3 cut(s)	418, 424, 519
HpaI	GTTAAC	1 cut(s)	1102
HpaII	CCGG	1 cut(s)	925
HphI	GGTGA	5 cut(s)	16, 184, 563, 1028, 1076
Hpy166II	GTNNAC	4 cut(s)	97, 259, 934, 1102
Hpy188I	TCNGA	3 cut(s)	358, 423, 1308
Hpy8I	GTNNAC	4 cut(s)	97, 259, 934, 1102
Hpy99I	CGWCG	1 cut(s)	1412
HpyAV	CCTTC	7 cut(s)	550, 571, 673, 817, 875, 1000, 1009
HpyCH4III	ACNGT	3 cut(s)	131, 385, 964
HpyF10VI	GCNNNNNNNGC	8 cut(s)	59, 296, 646, 659, 668, 701, 722, 1223
HpyF3I	CTNAG	7 cut(s)	402, 480, 636, 777, 870, 1095, 1364
Hsp92II	CATG	5 cut(s)	227, 700, 749, 1244, 1429
HspAI	GCGC	1 cut(s)	181
Ksp22I	TGATCA	1 cut(s)	1303
KspAI	GTTAAC	1 cut(s)	1102
Kzo9I	GATC	8 cut(s)	9, 114, 304, 809, 1113, 1123, 1296, 1303
LmnI	GCTCC	2 cut(s)	23, 1108
Lsp1109I	GCAGC	3 cut(s)	311, 313, 640
LweI	GCATC	6 cut(s)	450, 1204, 1225, 1260, 1299, 1342
MaeIII	GTNAC	4 cut(s)	730, 741, 1016, 1064
MalI	GATC	8 cut(s)	11, 116, 306, 811, 1115, 1125, 1298, 1305
MboI	GATC	8 cut(s)	9, 114, 304, 809, 1113, 1123, 1296, 1303
MflI	RGATCY	5 cut(s)	9, 809, 1113, 1123, 1296
MhlI	GDGCHC	2 cut(s)	74, 1181
MluCI	AATT	7 cut(s)	363, 453, 470, 609, 984, 1271, 1371
MlyI	GAGTC	2 cut(s)	418, 528
MmeI	TCCRAC	1 cut(s)	486
MroXI	GAANNNNTTC	2 cut(s)	197, 417
MseI	TTAA	5 cut(s)	66, 785, 900, 906, 1101
MslI	CAYNNNNRTG	4 cut(s)	104, 737, 1043, 1187
MspA1I	CMGCKG	2 cut(s)	302, 591
MspCI	CTTAAG	1 cut(s)	65
MspI	CCGG	1 cut(s)	925
MspR9I	CCNGG	6 cut(s)	124, 156, 278, 925, 1024, 1075
MvaI	CCWGG	5 cut(s)	124, 156, 278, 1024, 1075
MwoI	GCNNNNNNNGC	8 cut(s)	59, 296, 646, 659, 668, 701, 722, 1223
NciI	CCSGG	1 cut(s)	925
NdeII	GATC	8 cut(s)	9, 114, 304, 809, 1113, 1123, 1296, 1303
NlaIII	CATG	5 cut(s)	227, 700, 749, 1244, 1429
NlaIV	GGNNCC	2 cut(s)	597, 1151
NmuCI	GTSAC	4 cut(s)	730, 741, 1016, 1064
NspI	RCATGY	3 cut(s)	227, 749, 1429
OliI	CACNNNNGTG	2 cut(s)	737, 1187
PaqCI	CACCTGC	1 cut(s)	539
PasI	CCCWGGG	1 cut(s)	277
PciI	ACATGT	1 cut(s)	223
PdmI	GAANNNNTTC	2 cut(s)	197, 417
PfeI	GAWTC	1 cut(s)	418
PflFI	GACNNNGTC	2 cut(s)	242, 518
PkrI	GCNGC	4 cut(s)	301, 328, 655, 1225
PleI	GAGTC	2 cut(s)	418, 527
PpsI	GAGTC	2 cut(s)	418, 527
PscI	ACATGT	1 cut(s)	223
PshBI	ATTAAT	1 cut(s)	906
Psp6I	CCWGG	5 cut(s)	122, 154, 276, 1022, 1073
PspFI	CCCAGC	3 cut(s)	544, 591, 1033
PspGI	CCWGG	5 cut(s)	122, 154, 276, 1022, 1073
PspN4I	GGNNCC	2 cut(s)	597, 1151
PspPI	GGNCC	3 cut(s)	41, 773, 1150
PstNI	CAGNNNCTG	1 cut(s)	123
PsuI	RGATCY	5 cut(s)	9, 809, 1113, 1123, 1296
PsyI	GACNNNGTC	2 cut(s)	242, 518
PvuII	CAGCTG	1 cut(s)	302
RseI	CAYNNNNRTG	4 cut(s)	104, 737, 1043, 1187
SaqAI	TTAA	5 cut(s)	66, 785, 900, 906, 1101
SatI	GCNGC	4 cut(s)	300, 327, 654, 1224
Sau3AI	GATC	8 cut(s)	9, 114, 304, 809, 1113, 1123, 1296, 1303
Sau96I	GGNCC	3 cut(s)	41, 773, 1150
SchI	GAGTC	2 cut(s)	418, 528
ScrFI	CCNGG	6 cut(s)	124, 156, 278, 925, 1024, 1075
SduI	GDGCHC	2 cut(s)	74, 1181
SfaNI	GCATC	6 cut(s)	450, 1204, 1225, 1260, 1299, 1342
SinI	GGWCC	1 cut(s)	1150
SmiMI	CAYNNNNRTG	4 cut(s)	104, 737, 1043, 1187
SmlI	CTYRAG	5 cut(s)	65, 572, 735, 1174, 1418
SmoI	CTYRAG	5 cut(s)	65, 572, 735, 1174, 1418
Sse9I	AATT	7 cut(s)	363, 453, 470, 609, 984, 1271, 1371
SsiI	CCGC	2 cut(s)	589, 1223
StyD4I	CCNGG	6 cut(s)	122, 154, 276, 923, 1022, 1073
TaaI	ACNGT	3 cut(s)	131, 385, 964
TaqI	TCGA	3 cut(s)	216, 1332, 1407
TaqII	GACCGA	1 cut(s)	1274
TasI	AATT	7 cut(s)	363, 453, 470, 609, 984, 1271, 1371
TauI	GCSGC	1 cut(s)	1226
TfiI	GAWTC	1 cut(s)	418
Tru1I	TTAA	5 cut(s)	66, 785, 900, 906, 1101
Tru9I	TTAA	5 cut(s)	66, 785, 900, 906, 1101
TscAI	CASTG	5 cut(s)	124, 136, 214, 1018, 1189
TseFI	GTSAC	4 cut(s)	730, 741, 1016, 1064
TseI	GCWGC	3 cut(s)	299, 326, 653
Tsp45I	GTSAC	4 cut(s)	730, 741, 1016, 1064
TspDTI	ATGAA	3 cut(s)	1148, 1151, 1284
TspGWI	ACGGA	1 cut(s)	127
TspRI	CASTG	5 cut(s)	124, 136, 214, 1018, 1189
Tth111I	GACNNNGTC	2 cut(s)	242, 518
Vha464I	CTTAAG	1 cut(s)	65
VpaK11BI	GGWCC	1 cut(s)	1150
VspI	ATTAAT	1 cut(s)	906
XagI	CCTNNNNNAGG	2 cut(s)	479, 869
XapI	RAATTY	3 cut(s)	453, 470, 1271
XceI	RCATGY	3 cut(s)	227, 749, 1429
XcmI	CCANNNNNNNNNTGG	1 cut(s)	664
XmnI	GAANNNNTTC	2 cut(s)	197, 417

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.