Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0001872

Physical Location & Seq

Genomic Coordinates Reverse (-)

57915544 .. 57918604

Gene Structure 3061 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0449200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1932 bp

ATGGATCGGCAGGCCCACGACTACGCCGCCTACGCCCAACAACAACAGCAGCAGCAGCAGCGACAACCGCCGCCGCAGCCACAACAATTCGGGTACCCGCCCCAGGCCCAACAGTTTCACGGCCCTCCTTTCGGACCCCCACACCCGCCCCTCCAGCAATTTCCCTACCACCCCCACTTACAGCAGCAACCGCCGCCCCAGGTTCTCTCCCACGCGCCGCCGCCTCACCCTCACCACCTCCCCCCTCCCCCGGCCTTCGCACCCCTCGTCCCCCCGCCTTTCCACGCCGGCCCTCCTCCTCCGGTCGCCGGTCCTCCCTCCGACCCGGAGCTCCACAAACGGATCGACAAGCTCGTCGAGTACTCCGCCAAGAACGGACCCGACTTCGAAGCCATGATTCGCGAGAAGCAGCAGGATAATCCCGACTACGCTTTCCTCTTCGGCGGCGAAGGCCACGGCTATTACCGTTACAAGCTCTACGCCTCCACTCGGGTCGGGTCGTTCAACCCGAATCCGCAGTTCGCTCCCCACATGCTTCGTCCGCCGCCGAATCCGATGATGAATGGGCCCCCGAACCCGATGATGGGCGGCCCGCAGTCGTATTTCTACGACCAGCAGCGGCATAATCAGCAGCCTTTCGGAGTTTATGGGAGGTCCGATTATGACCAGGCGGCGGCGCAACCCTTTAAAGGGCTTTCGGGGCCGCTGCCTCCTGATGTTGCAATGGAGCTGAGCAATGTGCTTATGACGCTGAATGGGACCAAAGAGTCGATTAAAGGAGCCAAGTTTTGGTTTATGCAGAGGTCTATTTTCGCTCCGGCTCTGGCTGAGGCTCTTAGAGAGAGGGTGTTTGGACTTGATGATCCTGAGAGGCAGCTACATGTGATATTTCTTGCCAATGACATTTTGTTCGACAGCTCACATCGTCGAACTGGTGAAGGCCTTGATAACGAATCACTTGCACTCAAACCTATCTTAGGTTCCATGCTTGCAAGGATTTATCACAACCCTCAAATAACGGAAGACAATCAGATGAAGTTGCAGCAAATTTTGCAGTTATGGGTTTCCAATAACATTTATGATCAGGATACAATTGATGCATTTAGGAATGAGATGATTGGTGGACCATCAAGTAATTCTTTTCCAGGTCTTCCAAAAGACTTAGCTACTACTTCAACAGATTCAGCAGCAGGATTGCCACAATGGCAGCCTGATAGGCAAGGCTCTGTTTCGAGTTCACACGATCAAGAGCATCTTGATAAACATGTAGCTCCTGGTCAAGTGGTGCCACTTTCCGTGCCAACCCAGCAATTTCTTCCAAATTCAGTCCCTCCTGCTGCCTTTGCTGGGCCCCTCCCCATACCATCTTCTGTTCAACCAACAATCCCACAACCCCTGCCACATTTATTGCCTGGTCAAGCTGCTACCAGCGGCGAGAAGTTGCCACCATATCCTTTGTTCCCACCTGGTCTTATTCCTGAGATGGTCAGAAAGATGCAGATTGGCAGTGGGGTGCCATACTCACCGATGAGTCCTCTGGACATTCCAACCATCATACCTCCATCCACTGTACCTCAGTCCGAAATTCTTGAGAGAGTGTCAAAGTTCTTCAAAGAGATTGGAGAAGTTAACCCTTCTGAAGGACCTATTCATGGTTCTGATGGTAGAGACGATGATGAGTACGAAAGTAGTACTCCGGCACGCAAGGGAGGAGCTTGCATCCCTCCACCCCCAAACCTGCAGGTAGACCCAGAGACGGGGGCTTATGCTGATGGAAGTGTTGATCGAAAGAGTGGCTCGGGGAGATTGGGACTCGGGGCCACAGCTAATCCAAATGAGGTGAGCCAGTACGACGATGTCTATTCTTCTTACCGGAAACAGAGAAGCACCAACTACCACTCTTCCATGAGTGCAAGAGCTGCAGCAAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00040 ko00053 ko00520 ko01100 map00040 map00053 map00520 map01100

Pfam Domains

Protein Families

UDPG_MGDP_dh UDPG_MGDP_dh_C UDPG_MGDP_dh_N

Protein Analysis

643

Amino Acids

70.64

Weight (kDa)

5.95

Isoelectric Point (pI)

61.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Surp	PF01805	113 - 161	1.4e-14	Surp module
CID	PF04818	244 - 367	4.6e-21	CID domain
SWAP1_C	PF25123	483 - 643	2e-89	SUPPRESSOR-OF-WHITE-APRICOT-like, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001872)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26570
fragaria_vesca	FvH4_4g30330 FvH4_4g30330 FvH4_4g30330 FvH4_4g30330 FvH4_5g14230 FvH4_5g14230 FvH4_5g14230 FvH4_5g14230
malus_domestica	MD06G1200200.v1.1 MD13G1064400.v1.1 MD14G1209700.v1.1 MD16G1062900.v1.1
prunus_persica	Prupe.1G284300_v2.0.a1 Prupe.5G202800_v2.0.a1
pyrus_communis	pycom06g17680 pycom13g05690 pycom14g17320 pycom16g05500
rosa_chinensis	RchiOBHm_Chr4g0438621 RchiOBHm_Chr7g0182711
rosa_laevigata	RLG00000005108 RLG00000006346
rosa_multiflora	Rmu_co8409269.1_g000001 Rmu_sc0000014.1_g000040 Rmu_sc0006646.1_g000010
rosa_roxburghii	Rroxscaffold_3G00271060 Rroxscaffold_5G00379610
rosa_rugosa	Rorug04G0311900 Rorug06G0449100 Rorug06G0449100 Rorug06G0449200 Rorug06G0449300 Rorug06G0449300 Rorug06G0449400
rosa_samantha	Rh4AG362300 Rh4BG373700 Rh4CG387600 Rh4DG368400 Rh7AG053100 Rh7BG052700 Rh7CG054200 Rh7DG052500
rosa_wichuraiana	Rw0G006700 Rw0G016650 Rw7G004320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	353, 766
Acc36I	ACCTGC	2 cut(s)	1732, 1746
Acc65I	GGTACC	1 cut(s)	93
AccB1I	GGYRCC	3 cut(s)	93, 1285, 1513
AccB7I	CCANNNNNTGG	1 cut(s)	789
AccI	GTMKAC	1 cut(s)	1746
AccII	CGCG	2 cut(s)	215, 402
AclWI	GGATC	3 cut(s)	12, 350, 857
AcsI	RAATTY	3 cut(s)	1047, 1321, 1584
AcuI	CTGAAG	1 cut(s)	1659
AfaI	GTAC	6 cut(s)	95, 362, 1572, 1682, 1693, 1850
AflIII	ACRYGT	2 cut(s)	880, 1264
AgsI	TTSAA	4 cut(s)	505, 1176, 1376, 1612
AjnI	CCWGG	7 cut(s)	102, 198, 666, 1144, 1273, 1411, 1465
Alw21I	GWGCWC	1 cut(s)	333
Alw26I	GTCTC	2 cut(s)	1662, 1748
AlwI	GGATC	3 cut(s)	12, 350, 857
Ama87I	CYCGRG	3 cut(s)	489, 1798, 1814
ApaI	GGGCCC	2 cut(s)	570, 1353
ApoI	RAATTY	3 cut(s)	1047, 1321, 1584
ArsI	GACNNNNNNTTYG	2 cut(s)	893, 925
Asp718I	GGTACC	1 cut(s)	93
AspLEI	GCGC	2 cut(s)	217, 679
AsuC2I	CCSGG	2 cut(s)	251, 326
AsuHPI	GGTGA	5 cut(s)	218, 224, 947, 1515, 1852
AsuII	TTCGAA	1 cut(s)	387
AvaI	CYCGRG	3 cut(s)	489, 1798, 1814
AvaII	GGWCC	7 cut(s)	134, 311, 377, 654, 759, 1124, 1643
BaeGI	GKGCMC	2 cut(s)	570, 1353
BanI	GGYRCC	3 cut(s)	93, 1285, 1513
BanII	GRGCYC	3 cut(s)	333, 570, 1353
BbsI	GAAGAC	2 cut(s)	1029, 1142
Bbv12I	GWGCWC	1 cut(s)	333
BbvCI	CCTCAGC	1 cut(s)	828
BccI	CCATC	8 cut(s)	577, 1135, 1372, 1477, 1559, 1570, 1655, 1766
BceAI	ACGGC	2 cut(s)	136, 472
BcgI	CGANNNNNNTGC	2 cut(s)	941, 975
BciT130I	CCWGG	7 cut(s)	104, 200, 668, 1146, 1275, 1413, 1467
BciVI	GTATCC	1 cut(s)	1081
BclI	TGATCA	1 cut(s)	1081
BcnI	CCSGG	2 cut(s)	251, 326
BcoDI	GTCTC	2 cut(s)	1662, 1748
BfmI	CTRYAG	2 cut(s)	1739, 1920
BfuAI	ACCTGC	2 cut(s)	1732, 1746
BfuI	GTATCC	1 cut(s)	1081
BglI	GCCNNNNNGGC	2 cut(s)	1204, 1216
BlpI	GCTNAGC	1 cut(s)	731
BmcAI	AGTACT	2 cut(s)	362, 1693
Bme1390I	CCNGG	9 cut(s)	104, 200, 251, 326, 668, 1146, 1275, 1413, 1467
Bme18I	GGWCC	7 cut(s)	134, 311, 377, 654, 759, 1124, 1643
BmeT110I	CYCGRG	3 cut(s)	489, 1798, 1814
BmrFI	CCNGG	9 cut(s)	104, 200, 251, 326, 668, 1146, 1275, 1413, 1467
BmsI	GCATC	4 cut(s)	1087, 1261, 1485, 1728
BpiI	GAAGAC	2 cut(s)	1029, 1142
BpmI	CTGGAG	1 cut(s)	137
Bpu10I	CCTNAGC	1 cut(s)	828
Bpu1102I	GCTNAGC	1 cut(s)	731
Bpu14I	TTCGAA	1 cut(s)	387
BpuEI	CTTGAG	1 cut(s)	1610
BpuMI	CCSGG	2 cut(s)	251, 326
BsaJI	CCNNGG	4 cut(s)	102, 198, 249, 454
BsaWI	WCCGGW	2 cut(s)	301, 1872
Bse118I	RCCGGY	2 cut(s)	287, 308
Bse1I	ACTGG	2 cut(s)	937, 1846
Bse3DI	GCAATG	2 cut(s)	729, 742
BseBI	CCWGG	7 cut(s)	104, 200, 668, 1146, 1275, 1413, 1467
BseDI	CCNNGG	4 cut(s)	102, 198, 249, 454
BseGI	GGATG	2 cut(s)	1562, 1719
BseMI	GCAATG	2 cut(s)	729, 742
BseMII	CTCAG	5 cut(s)	722, 819, 858, 1470, 1589
BseNI	ACTGG	2 cut(s)	937, 1846
BseRI	GAGGAG	3 cut(s)	285, 288, 1725
BseSI	GKGCMC	2 cut(s)	570, 1353
BseYI	CCCAGC	2 cut(s)	1305, 1346
Bsh1236I	CGCG	2 cut(s)	215, 402
Bsh1285I	CGRYCG	1 cut(s)	306
BshNI	GGYRCC	3 cut(s)	93, 1285, 1513
BsiEI	CGRYCG	1 cut(s)	306
BsiHKAI	GWGCWC	1 cut(s)	333
BsiHKCI	CYCGRG	3 cut(s)	489, 1798, 1814
BsiSI	CCGG	8 cut(s)	251, 288, 302, 309, 326, 818, 1697, 1873
BslFI	GGGAC	4 cut(s)	254, 772, 1313, 1824
BsmAI	GTCTC	2 cut(s)	1662, 1748
BsmBI	CGTCTC	2 cut(s)	1662, 1748
BsmFI	GGGAC	4 cut(s)	254, 772, 1313, 1824
BsoBI	CYCGRG	3 cut(s)	489, 1798, 1814
Bsp119I	TTCGAA	1 cut(s)	387
Bsp120I	GGGCCC	2 cut(s)	566, 1349
Bsp1286I	GDGCHC	3 cut(s)	333, 570, 1353
Bsp143I	GATC	6 cut(s)	4, 342, 862, 1081, 1243, 1783
Bsp1720I	GCTNAGC	1 cut(s)	731
Bsp68I	TCGCGA	1 cut(s)	402
BspCNI	CTCAG	5 cut(s)	723, 820, 859, 1471, 1588
BspFNI	CGCG	2 cut(s)	215, 402
BspMAI	CTGCAG	2 cut(s)	1743, 1924
BspMI	ACCTGC	2 cut(s)	1732, 1746
BspPI	GGATC	3 cut(s)	12, 350, 857
BspT104I	TTCGAA	1 cut(s)	387
BspT107I	GGYRCC	3 cut(s)	93, 1285, 1513
BsrDI	GCAATG	2 cut(s)	729, 742
BsrFI	RCCGGY	2 cut(s)	287, 308
BsrI	ACTGG	2 cut(s)	937, 1846
BssAI	RCCGGY	2 cut(s)	287, 308
BssECI	CCNNGG	4 cut(s)	102, 198, 249, 454
BssMI	GATC	6 cut(s)	4, 342, 862, 1081, 1243, 1783
Bst2UI	CCWGG	7 cut(s)	104, 200, 668, 1146, 1275, 1413, 1467
Bst4CI	ACNGT	3 cut(s)	114, 467, 1570
Bst6I	CTCTTC	2 cut(s)	443, 1906
BstAPI	GCANNNNNTGC	2 cut(s)	1051, 1919
BstBI	TTCGAA	1 cut(s)	387
BstC8I	GCNNGC	6 cut(s)	12, 289, 593, 990, 1702, 1717
BstDEI	CTNAG	8 cut(s)	731, 828, 836, 867, 976, 1162, 1479, 1575
BstDSI	CCRYGG	1 cut(s)	454
BstENI	CCTNNNNNAGG	2 cut(s)	975, 1638
BstF5I	GGATG	2 cut(s)	1562, 1719
BstFNI	CGCG	2 cut(s)	215, 402
BstHHI	GCGC	2 cut(s)	217, 679
BstKTI	GATC	6 cut(s)	7, 345, 865, 1084, 1246, 1786
BstMAI	GTCTC	2 cut(s)	1662, 1748
BstMBI	GATC	6 cut(s)	4, 342, 862, 1081, 1243, 1783
BstMCI	CGRYCG	1 cut(s)	306
BstNI	CCWGG	7 cut(s)	104, 200, 668, 1146, 1275, 1413, 1467
BstNSI	RCATGY	3 cut(s)	535, 884, 1268
BstSCI	CCNGG	9 cut(s)	102, 198, 249, 324, 666, 1144, 1273, 1411, 1465
BstSFI	CTRYAG	2 cut(s)	1739, 1920
BstSLI	GKGCMC	2 cut(s)	570, 1353
BstUI	CGCG	2 cut(s)	215, 402
BstV2I	GAAGAC	2 cut(s)	1029, 1142
BsuI	GTATCC	1 cut(s)	1081
BtgI	CCRYGG	1 cut(s)	454
BtsCI	GGATG	2 cut(s)	1562, 1719
BtsI	GCAGTG	1 cut(s)	1513
BtsIMutI	CAGTG	2 cut(s)	1513, 1566
BtuMI	TCGCGA	1 cut(s)	402
BveI	ACCTGC	2 cut(s)	1732, 1746
Cac8I	GCNNGC	6 cut(s)	12, 289, 593, 990, 1702, 1717
CfoI	GCGC	2 cut(s)	217, 679
Cfr10I	RCCGGY	2 cut(s)	287, 308
CseI	GACGC	1 cut(s)	757
CsiI	ACCWGGT	1 cut(s)	1465
Csp6I	GTAC	6 cut(s)	94, 361, 1571, 1681, 1692, 1849
CspCI	CAANNNNNGTGG	2 cut(s)	1389, 1424
CviAII	CATG	7 cut(s)	394, 532, 881, 985, 1265, 1652, 1906
CviQI	GTAC	6 cut(s)	94, 361, 1571, 1681, 1692, 1849
DdeI	CTNAG	8 cut(s)	731, 828, 836, 867, 976, 1162, 1479, 1575
DpnI	GATC	6 cut(s)	6, 344, 864, 1083, 1245, 1785
DpnII	GATC	6 cut(s)	4, 342, 862, 1081, 1243, 1783
DraI	TTTAAA	1 cut(s)	688
DrdI	GACNNNNNNGTC	2 cut(s)	353, 766
DseDI	GACNNNNNNGTC	2 cut(s)	353, 766
Eam1104I	CTCTTC	2 cut(s)	443, 1906
EarI	CTCTTC	2 cut(s)	443, 1906
EciI	GGCGGA	2 cut(s)	355, 531
Ecl136II	GAGCTC	1 cut(s)	331
Eco147I	AGGCCT	1 cut(s)	942
Eco24I	GRGCYC	3 cut(s)	333, 570, 1353
Eco47I	GGWCC	7 cut(s)	134, 311, 377, 654, 759, 1124, 1643
Eco53kI	GAGCTC	1 cut(s)	331
Eco57I	CTGAAG	1 cut(s)	1659
Eco88I	CYCGRG	3 cut(s)	489, 1798, 1814
EcoICRI	GAGCTC	1 cut(s)	331
EcoNI	CCTNNNNNAGG	2 cut(s)	975, 1638
EcoO109I	RGGNCCY	3 cut(s)	567, 1350, 1643
EcoRII	CCWGG	7 cut(s)	102, 198, 666, 1144, 1273, 1411, 1465
EcoT22I	ATGCAT	1 cut(s)	1102
EcoT38I	GRGCYC	3 cut(s)	333, 570, 1353
Esp3I	CGTCTC	2 cut(s)	1662, 1748
FaeI	CATG	7 cut(s)	397, 535, 884, 988, 1268, 1655, 1909
FalI	AAGNNNNNCTT	4 cut(s)	1123, 1155, 1239, 1271
FaqI	GGGAC	4 cut(s)	254, 772, 1313, 1824
FatI	CATG	7 cut(s)	393, 531, 880, 984, 1264, 1651, 1905
FauI	CCCGC	4 cut(s)	105, 153, 282, 600
FbaI	TGATCA	1 cut(s)	1081
FblI	GTMKAC	1 cut(s)	1746
FokI	GGATG	2 cut(s)	1549, 1706
FriOI	GRGCYC	3 cut(s)	333, 570, 1353
GlaI	GCGC	2 cut(s)	216, 678
GsaI	CCCAGC	2 cut(s)	1309, 1350
GsuI	CTGGAG	1 cut(s)	137
HapII	CCGG	8 cut(s)	251, 288, 302, 309, 326, 818, 1697, 1873
HgaI	GACGC	1 cut(s)	757
HhaI	GCGC	2 cut(s)	217, 679
Hin1II	CATG	7 cut(s)	397, 535, 884, 988, 1268, 1655, 1909
Hin6I	GCGC	2 cut(s)	215, 677
HinP1I	GCGC	2 cut(s)	215, 677
HincII	GTYRAC	1 cut(s)	1630
HindII	GTYRAC	1 cut(s)	1630
HinfI	GANTC	8 cut(s)	397, 511, 550, 767, 953, 1181, 1531, 1812
HpaI	GTTAAC	1 cut(s)	1630
HpaII	CCGG	8 cut(s)	251, 288, 302, 309, 326, 818, 1697, 1873
HphI	GGTGA	5 cut(s)	218, 224, 947, 1515, 1852
Hpy166II	GTNNAC	4 cut(s)	1124, 1238, 1630, 1747
Hpy8I	GTNNAC	4 cut(s)	1124, 1238, 1630, 1747
Hpy99I	CGWCG	3 cut(s)	359, 930, 1856
HpyAV	CCTTC	5 cut(s)	265, 443, 932, 1634, 1644
HpyCH4III	ACNGT	3 cut(s)	114, 467, 1570
HpyF3I	CTNAG	8 cut(s)	731, 828, 836, 867, 976, 1162, 1479, 1575
Hsp92II	CATG	7 cut(s)	397, 535, 884, 988, 1268, 1655, 1909
HspAI	GCGC	2 cut(s)	215, 677
KpnI	GGTACC	1 cut(s)	97
KroI	GCCGGC	1 cut(s)	287
KroNI	GCCGGC	1 cut(s)	289
Ksp22I	TGATCA	1 cut(s)	1081
KspAI	GTTAAC	1 cut(s)	1630
Kzo9I	GATC	6 cut(s)	4, 342, 862, 1081, 1243, 1783
LmnI	GCTCC	8 cut(s)	328, 336, 529, 727, 779, 820, 1276, 1712
LweI	GCATC	4 cut(s)	1087, 1261, 1485, 1728
MabI	ACCWGGT	1 cut(s)	1465
MaeIII	GTNAC	1 cut(s)	467
MalI	GATC	6 cut(s)	6, 344, 864, 1083, 1245, 1785
MboI	GATC	6 cut(s)	4, 342, 862, 1081, 1243, 1783
MboII	GAAGA	8 cut(s)	430, 1034, 1142, 1307, 1359, 1600, 1857, 1893
MfeI	CAATTG	1 cut(s)	1092
MhlI	GDGCHC	3 cut(s)	333, 570, 1353
MluCI	AATT	8 cut(s)	86, 158, 1047, 1092, 1135, 1310, 1321, 1584
MlyI	GAGTC	3 cut(s)	776, 1540, 1806
MmeI	TCCRAC	2 cut(s)	345, 1571
Mph1103I	ATGCAT	1 cut(s)	1102
MroNI	GCCGGC	1 cut(s)	287
MseI	TTAA	3 cut(s)	687, 774, 1629
MspA1I	CMGCKG	3 cut(s)	619, 706, 1431
MspI	CCGG	8 cut(s)	251, 288, 302, 309, 326, 818, 1697, 1873
MspR9I	CCNGG	9 cut(s)	104, 200, 251, 326, 668, 1146, 1275, 1413, 1467
MunI	CAATTG	1 cut(s)	1092
MvaI	CCWGG	7 cut(s)	104, 200, 668, 1146, 1275, 1413, 1467
MvnI	CGCG	2 cut(s)	215, 402
NaeI	GCCGGC	1 cut(s)	289
NciI	CCSGG	2 cut(s)	251, 326
NdeII	GATC	6 cut(s)	4, 342, 862, 1081, 1243, 1783
NgoMIV	GCCGGC	1 cut(s)	287
NlaIII	CATG	7 cut(s)	397, 535, 884, 988, 1268, 1655, 1909
NruI	TCGCGA	1 cut(s)	402
NsiI	ATGCAT	1 cut(s)	1102
NspI	RCATGY	3 cut(s)	535, 884, 1268
NspV	TTCGAA	1 cut(s)	387
PceI	AGGCCT	1 cut(s)	942
PciI	ACATGT	2 cut(s)	880, 1264
PcsI	WCGNNNNNNNCGW	3 cut(s)	264, 351, 506
PdiI	GCCGGC	1 cut(s)	289
PfeI	GAWTC	5 cut(s)	397, 511, 550, 953, 1181
PflFI	GACNNNGTC	1 cut(s)	1856
PflMI	CCANNNNNTGG	1 cut(s)	789
PleI	GAGTC	3 cut(s)	775, 1539, 1806
PpsI	GAGTC	3 cut(s)	775, 1539, 1806
PpuMI	RGGWCCY	1 cut(s)	1643
PscI	ACATGT	2 cut(s)	880, 1264
Psp124BI	GAGCTC	1 cut(s)	333
Psp5II	RGGWCCY	1 cut(s)	1643
Psp6I	CCWGG	7 cut(s)	102, 198, 666, 1144, 1273, 1411, 1465
PspFI	CCCAGC	2 cut(s)	1305, 1346
PspGI	CCWGG	7 cut(s)	102, 198, 666, 1144, 1273, 1411, 1465
PspOMI	GGGCCC	2 cut(s)	566, 1349
PspPPI	RGGWCCY	1 cut(s)	1643
PstI	CTGCAG	2 cut(s)	1743, 1924
PsyI	GACNNNGTC	1 cut(s)	1856
RruI	TCGCGA	1 cut(s)	402
RsaI	GTAC	6 cut(s)	95, 362, 1572, 1682, 1693, 1850
RsaNI	GTAC	6 cut(s)	94, 361, 1571, 1681, 1692, 1849
SacI	GAGCTC	1 cut(s)	333
SaqAI	TTAA	3 cut(s)	687, 774, 1629
Sau3AI	GATC	6 cut(s)	4, 342, 862, 1081, 1243, 1783
SbfI	CCTGCAGG	1 cut(s)	1743
ScaI	AGTACT	2 cut(s)	362, 1693
SchI	GAGTC	3 cut(s)	776, 1540, 1806
ScrFI	CCNGG	9 cut(s)	104, 200, 251, 326, 668, 1146, 1275, 1413, 1467
SdaI	CCTGCAGG	1 cut(s)	1743
SduI	GDGCHC	3 cut(s)	333, 570, 1353
SexAI	ACCWGGT	1 cut(s)	1465
SfaNI	GCATC	4 cut(s)	1087, 1261, 1485, 1728
SfcI	CTRYAG	2 cut(s)	1739, 1920
SfuI	TTCGAA	1 cut(s)	387
SinI	GGWCC	7 cut(s)	134, 311, 377, 654, 759, 1124, 1643
SmlI	CTYRAG	1 cut(s)	1589
SmoI	CTYRAG	1 cut(s)	1589
Sse8387I	CCTGCAGG	1 cut(s)	1743
Sse9I	AATT	8 cut(s)	86, 158, 1047, 1092, 1135, 1310, 1321, 1584
SseBI	AGGCCT	1 cut(s)	942
SstI	GAGCTC	1 cut(s)	333
StuI	AGGCCT	1 cut(s)	942
StyD4I	CCNGG	9 cut(s)	102, 198, 249, 324, 666, 1144, 1273, 1411, 1465
TaaI	ACNGT	3 cut(s)	114, 467, 1570
TaqI	TCGA	8 cut(s)	345, 357, 387, 770, 912, 928, 1232, 1786
TasI	AATT	8 cut(s)	86, 158, 1047, 1092, 1135, 1310, 1321, 1584
TatI	WGTACW	2 cut(s)	360, 1691
TfiI	GAWTC	5 cut(s)	397, 511, 550, 953, 1181
Tru1I	TTAA	3 cut(s)	687, 774, 1629
Tru9I	TTAA	3 cut(s)	687, 774, 1629
TscAI	CASTG	2 cut(s)	1513, 1573
TspDTI	ATGAA	3 cut(s)	575, 1049, 1640
TspGWI	ACGGA	4 cut(s)	355, 390, 1034, 1285
TspRI	CASTG	2 cut(s)	1513, 1573
Tth111I	GACNNNGTC	1 cut(s)	1856
Van91I	CCANNNNNTGG	1 cut(s)	789
VpaK11BI	GGWCC	7 cut(s)	134, 311, 377, 654, 759, 1124, 1643
XagI	CCTNNNNNAGG	2 cut(s)	975, 1638
XapI	RAATTY	3 cut(s)	1047, 1321, 1584
XceI	RCATGY	3 cut(s)	535, 884, 1268
XmiI	GTMKAC	1 cut(s)	1746
ZrmI	AGTACT	2 cut(s)	362, 1693
Zsp2I	ATGCAT	1 cut(s)	1102

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.