Rroxscaffold_3G00271060

UDP-glucose 6-dehydrogenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0001872
Physical Location & Seq
Forward (+)
63485675 .. 63488101
2427 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00271060.1

Sequence Viewer

Length: 1443 bp
ATGGTGAAGATCTGCTGCATTGGAGCTGGCTATGTCGGTGGACCAACCATGGCAGTGATTGCCCTCAAGTGTCCGGCAATTGAAGTAGCCGTAGTTGATATTTCAGTGTCAAGAATTGCGGCCTGGAACAGCGACCAGCTCCCAATTTACGAGCCAGGGCTTGAGGAGATTGTGAAGCAGTGCAGGGGGAAGAACCTGTTCTTCAGCACAGCTGTGGAGAAGCATGTTGCTGAGGCAGACATTATCTTCGTGTCGGTTAATACACCGACGAAGACTAGAGGCCTGGGAGCTGGCAAGGCTGCTGACTTGACCTACTGGGAGAGTGCAGCAAGGATGATAGCAGATGTGTCCAAGTCCAACAAGATTGTGGTGGAGAAGTCGACGGTTCCAGTGAAGACTGCGGAAGCAATTGAGAAGATTTTGACTCATAACAGCAAGGGGATCGAGTACCAGATTCTGTCCAACCCGGAGTTTCTTGCCGAGGGGACAGCAATTGAGGATCTATTCAAACCCGACCGAGTTCTGATAGGAGGGAGGGAAACCGCTGGAGGACAGAAGGCAGTCCAGGTATTGAAAGAAGTATATGCTAATTGGGTACCTGAGGACAGAATCATCACAACTAATCTATGGTCAGCTGAGCTTTCGAAGCTCGCTGCCAATGCCTTCTTGGCGCAGAGGATCTCCTCTGTTAATGCTATGTCAGCACTGTGTGAGGCTACTGGAGCAGATGTCTCACAGGTCGCTCATGCTGTGGGGAAAGACAGCAGAATTGGACCCAAGTTTCTTAATGCTAGTGTTGGTTTTGGAGGGTCTTGTTTCCAGAAGGACATTCTCAACCTGGTGTATATCTGTGAGTGCAATGGACTACCTGAAGTAGCAAACTACTGGAAACAAGTGATCAAGGTGAATGACTACCAGAAGAATCGATTTGTTAACCGAGTTGTGTCTTCTATGTTCAACACAGTTTCAGGCAAGAAGATTGCCATTCTTGGGTTTGCATTCAAGAAAGACACAGGTGACACAAGGGAGACACCTGCCATTGATGTTTGCAAGGGTCTGCTGGGAGATAAGGCACAGTTGAGCATATATGACCTGCAGGTAACTGAGGAGCAGATCCAGAGGGATCTGTCGATGAACAAATTTGATTGGGACCATCCGATTCATCTGCAGCCAGCTAGCTCGATTGAAATGAAGCAAGTCAGTGTTGTGTGTGATGCTTATGAGGCAACCAAAGGAGCTCATGGGATCTGCATTCTTACTGAGTGGGATGAGTTCAAGACTCTCGATTACAAGAAGATTTACGACAGCATGCAGAAGCCTGCATTTGTGTTTGATGGAAGGAATGTCGTTAATGTTGGAGAGCTGAGGAAGATTGGATTCATTGTCTACTCAATTGGAAAGCCCTTGGACTCATGGCTCAAGGACATGCCTGCAGTGGCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00040 ko00053 ko00520 ko01100 map00040 map00053 map00520 map01100
Pfam Domains
Protein Families
UDPG_MGDP_dh UDPG_MGDP_dh_C UDPG_MGDP_dh_N

Protein Analysis

480

Amino Acids

52.58

Weight (kDa)

6.37

Isoelectric Point (pI)

28.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPG_MGDP_dh_N PF03721 3 - 184 3.2e-65 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
UDPG_MGDP_dh PF00984 210 - 304 6.1e-33 UDP-glucose/GDP-mannose dehydrogenase family, central domain
UDPG_MGDP_dh_C PF03720 328 - 451 5.6e-29 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1042
Acc36I ACCTGC 3 cut(s) 1042, 1087, 1101
Acc65I GGTACC 1 cut(s) 595
AccB1I GGYRCC 1 cut(s) 595
AccI GTMKAC 2 cut(s) 380, 1386
AciI CCGC 3 cut(s) 119, 401, 543
AclWI GGATC 6 cut(s) 449, 507, 686, 1108, 1131, 1253
AcsI RAATTY 1 cut(s) 1139
AcuI CTGAAG 2 cut(s) 187, 891
AdeI CACNNNGTG 1 cut(s) 710
AfaI GTAC 2 cut(s) 449, 597
AfiI CCNNNNNNNGG 1 cut(s) 990
AgsI TTSAA 7 cut(s) 83, 508, 574, 958, 1003, 1187, 1276
AjnI CCWGG 5 cut(s) 122, 154, 282, 564, 837
AleI CACNNNNGTG 1 cut(s) 212
Alw21I GWGCWC 1 cut(s) 1240
Alw26I GTCTC 2 cut(s) 736, 1022
AlwI GGATC 6 cut(s) 449, 507, 686, 1108, 1131, 1253
AlwNI CAGNNNCTG 1 cut(s) 457
AoxI GGCC 2 cut(s) 120, 280
ApeKI GCWGC 5 cut(s) 15, 299, 326, 653, 1168
ApoI RAATTY 1 cut(s) 1139
ArsI GACNNNNNNTTYG 2 cut(s) 230, 262
Asp700I GAANNNNTTC 1 cut(s) 197
Asp718I GGTACC 1 cut(s) 595
AspLEI GCGC 1 cut(s) 673
AspS9I GGNCC 3 cut(s) 41, 773, 1150
AsuC2I CCSGG 1 cut(s) 467
AsuHPI GGTGA 3 cut(s) 16, 916, 1028
AsuII TTCGAA 1 cut(s) 644
AsuNHI GCTAGC 1 cut(s) 1175
AvaII GGWCC 3 cut(s) 41, 773, 1150
AxyI CCTNAGG 1 cut(s) 600
BanI GGYRCC 1 cut(s) 595
BanII GRGCYC 1 cut(s) 1240
BbsI GAAGAC 3 cut(s) 278, 401, 939
Bbv12I GWGCWC 1 cut(s) 1240
BbvCI CCTCAGC 2 cut(s) 231, 1364
BbvI GCAGC 5 cut(s) 2, 286, 338, 640, 1180
BccI CCATC 2 cut(s) 1161, 1328
BceAI ACGGC 1 cut(s) 74
BcgI CGANNNNNNTGC 4 cut(s) 424, 458, 1147, 1181
BciT130I CCWGG 5 cut(s) 124, 156, 284, 566, 839
BclI TGATCA 1 cut(s) 897
BcnI CCSGG 1 cut(s) 467
BcoDI GTCTC 2 cut(s) 736, 1022
BfaI CTAG 3 cut(s) 276, 792, 1176
BfmI CTRYAG 3 cut(s) 1094, 1166, 1431
BfuAI ACCTGC 3 cut(s) 1042, 1087, 1101
BglI GCCNNNNNGGC 1 cut(s) 668
BglII AGATCT 1 cut(s) 9
BisI GCNGC 6 cut(s) 16, 120, 300, 327, 654, 1169
BlpI GCTNAGC 1 cut(s) 636
BlsI GCNGC 6 cut(s) 17, 121, 301, 328, 655, 1170
Bme1390I CCNGG 6 cut(s) 124, 156, 284, 467, 566, 839
Bme18I GGWCC 3 cut(s) 41, 773, 1150
BmgT120I GGNCC 3 cut(s) 41, 773, 1150
BmiI GGNNCC 4 cut(s) 387, 597, 775, 1151
BmrFI CCNGG 6 cut(s) 124, 156, 284, 467, 566, 839
BmrI ACTGGG 1 cut(s) 325
BmsI GCATC 1 cut(s) 1204
BmtI GCTAGC 1 cut(s) 1179
BmuI ACTGGG 1 cut(s) 325
BpiI GAAGAC 3 cut(s) 278, 401, 939
BpmI CTGGAG 2 cut(s) 567, 741
Bpu10I CCTNAGC 2 cut(s) 231, 1364
Bpu1102I GCTNAGC 1 cut(s) 636
Bpu14I TTCGAA 1 cut(s) 644
BpuEI CTTGAG 3 cut(s) 50, 182, 1403
BpuMI CCSGG 1 cut(s) 467
Bsa29I ATCGAT 1 cut(s) 925
BsaJI CCNNGG 5 cut(s) 48, 155, 283, 480, 1404
BsaXI ACNNNNNCTCC 2 cut(s) 714, 744
Bsc4I CCNNNNNNNGG 1 cut(s) 990
Bse1I ACTGG 4 cut(s) 320, 389, 724, 890
Bse21I CCTNAGG 1 cut(s) 600
Bse3DI GCAATG 1 cut(s) 865
BseBI CCWGG 5 cut(s) 124, 156, 284, 566, 839
BseCI ATCGAT 1 cut(s) 925
BseDI CCNNGG 5 cut(s) 48, 155, 283, 480, 1404
BseGI GGATG 3 cut(s) 339, 1153, 1273
BseLI CCNNNNNNNGG 1 cut(s) 990
BseMI GCAATG 1 cut(s) 865
BseMII CTCAG 6 cut(s) 222, 591, 627, 1095, 1251, 1355
BseNI ACTGG 4 cut(s) 320, 389, 724, 890
BseRI GAGGAG 3 cut(s) 179, 673, 1121
BseXI GCAGC 5 cut(s) 2, 286, 338, 640, 1180
BseYI CCCAGC 1 cut(s) 1060
BsgI GTGCAG 2 cut(s) 202, 345
Bsh1285I CGRYCG 1 cut(s) 517
BshFI GGCC 2 cut(s) 122, 282
BshNI GGYRCC 1 cut(s) 595
BshVI ATCGAT 1 cut(s) 925
BsiEI CGRYCG 1 cut(s) 517
BsiHKAI GWGCWC 1 cut(s) 1240
BsiSI CCGG 2 cut(s) 74, 467
BslFI GGGAC 2 cut(s) 499, 1163
BslI CCNNNNNNNGG 1 cut(s) 990
BsmAI GTCTC 2 cut(s) 736, 1022
BsmFI GGGAC 2 cut(s) 499, 1163
BsmI GAATGC 2 cut(s) 998, 1251
BsnI GGCC 2 cut(s) 122, 282
Bsp119I TTCGAA 1 cut(s) 644
Bsp1286I GDGCHC 1 cut(s) 1240
Bsp143I GATC 8 cut(s) 9, 441, 499, 678, 897, 1113, 1123, 1245
Bsp1720I GCTNAGC 1 cut(s) 636
Bsp19I CCATGG 1 cut(s) 48
BspACI CCGC 3 cut(s) 119, 401, 543
BspANI GGCC 2 cut(s) 122, 282
BspCNI CTCAG 6 cut(s) 223, 592, 628, 1096, 1252, 1356
BspDI ATCGAT 1 cut(s) 925
BspLI GGNNCC 4 cut(s) 387, 597, 775, 1151
BspMAI CTGCAG 3 cut(s) 1098, 1170, 1435
BspMI ACCTGC 3 cut(s) 1042, 1087, 1101
BspOI GCTAGC 1 cut(s) 1179
BspPI GGATC 6 cut(s) 449, 507, 686, 1108, 1131, 1253
BspT104I TTCGAA 1 cut(s) 644
BspT107I GGYRCC 1 cut(s) 595
BsrDI GCAATG 1 cut(s) 865
BsrI ACTGG 4 cut(s) 320, 389, 724, 890
BssECI CCNNGG 5 cut(s) 48, 155, 283, 480, 1404
BssMI GATC 8 cut(s) 9, 441, 499, 678, 897, 1113, 1123, 1245
BssT1I CCWWGG 2 cut(s) 48, 1404
Bst2UI CCWGG 5 cut(s) 124, 156, 284, 566, 839
Bst4CI ACNGT 4 cut(s) 385, 708, 964, 1077
BstAPI GCANNNNNTGC 1 cut(s) 59
BstBI TTCGAA 1 cut(s) 644
BstC8I GCNNGC 8 cut(s) 28, 292, 651, 1173, 1177, 1310, 1320, 1431
BstDEI CTNAG 6 cut(s) 231, 600, 636, 1104, 1260, 1364
BstDSI CCRYGG 1 cut(s) 48
BstF5I GGATG 3 cut(s) 339, 1153, 1273
BstHHI GCGC 1 cut(s) 673
BstKTI GATC 8 cut(s) 12, 444, 502, 681, 900, 1116, 1126, 1248
BstMAI GTCTC 2 cut(s) 736, 1022
BstMBI GATC 8 cut(s) 9, 441, 499, 678, 897, 1113, 1123, 1245
BstMCI CGRYCG 1 cut(s) 517
BstMWI GCNNNNNNNGC 8 cut(s) 59, 296, 646, 659, 668, 701, 722, 1223
BstNI CCWGG 5 cut(s) 124, 156, 284, 566, 839
BstNSI RCATGY 3 cut(s) 227, 1312, 1429
BstSCI CCNGG 6 cut(s) 122, 154, 282, 465, 564, 837
BstSFI CTRYAG 3 cut(s) 1094, 1166, 1431
BstV1I GCAGC 5 cut(s) 2, 286, 338, 640, 1180
BstV2I GAAGAC 3 cut(s) 278, 401, 939
BstX2I RGATCY 6 cut(s) 9, 499, 678, 1113, 1123, 1245
BstYI RGATCY 6 cut(s) 9, 499, 678, 1113, 1123, 1245
Bsu15I ATCGAT 1 cut(s) 925
Bsu36I CCTNAGG 1 cut(s) 600
BsuRI GGCC 2 cut(s) 122, 282
BsuTUI ATCGAT 1 cut(s) 925
BtgI CCRYGG 1 cut(s) 48
BtsCI GGATG 3 cut(s) 339, 1153, 1273
BtsI GCAGTG 3 cut(s) 60, 185, 1440
BtsIMutI CAGTG 7 cut(s) 60, 111, 185, 396, 704, 1207, 1440
BveI ACCTGC 3 cut(s) 1042, 1087, 1101
Cac8I GCNNGC 8 cut(s) 28, 292, 651, 1173, 1177, 1310, 1320, 1431
CaiI CAGNNNCTG 1 cut(s) 457
CfoI GCGC 1 cut(s) 673
Cfr13I GGNCC 3 cut(s) 41, 773, 1150
ClaI ATCGAT 1 cut(s) 925
CsiI ACCWGGT 1 cut(s) 837
Csp6I GTAC 2 cut(s) 448, 596
CviAII CATG 7 cut(s) 49, 224, 746, 1241, 1309, 1413, 1426
CviQI GTAC 2 cut(s) 448, 596
DdeI CTNAG 6 cut(s) 231, 600, 636, 1104, 1260, 1364
DpnI GATC 8 cut(s) 11, 443, 501, 680, 899, 1115, 1125, 1247
DpnII GATC 8 cut(s) 9, 441, 499, 678, 897, 1113, 1123, 1245
DraIII CACNNNGTG 1 cut(s) 710
Ecl136II GAGCTC 1 cut(s) 1238
Eco130I CCWWGG 2 cut(s) 48, 1404
Eco147I AGGCCT 1 cut(s) 282
Eco24I GRGCYC 1 cut(s) 1240
Eco47I GGWCC 3 cut(s) 41, 773, 1150
Eco53kI GAGCTC 1 cut(s) 1238
Eco57I CTGAAG 2 cut(s) 187, 891
Eco81I CCTNAGG 1 cut(s) 600
EcoICRI GAGCTC 1 cut(s) 1238
EcoRII CCWGG 5 cut(s) 122, 154, 282, 564, 837
EcoT14I CCWWGG 2 cut(s) 48, 1404
EcoT38I GRGCYC 1 cut(s) 1240
ErhI CCWWGG 2 cut(s) 48, 1404
FaeI CATG 7 cut(s) 52, 227, 749, 1244, 1312, 1416, 1429
FaqI GGGAC 2 cut(s) 499, 1163
FatI CATG 7 cut(s) 48, 223, 745, 1240, 1308, 1412, 1425
FbaI TGATCA 1 cut(s) 897
FblI GTMKAC 2 cut(s) 380, 1386
Fnu4HI GCNGC 6 cut(s) 16, 120, 300, 327, 654, 1169
FokI GGATG 3 cut(s) 346, 1140, 1280
FriOI GRGCYC 1 cut(s) 1240
Fsp4HI GCNGC 6 cut(s) 16, 120, 300, 327, 654, 1169
FspBI CTAG 3 cut(s) 276, 792, 1176
GlaI GCGC 1 cut(s) 672
GluI GCNGC 6 cut(s) 16, 120, 300, 327, 654, 1169
GsaI CCCAGC 1 cut(s) 1064
GsuI CTGGAG 2 cut(s) 567, 741
HaeIII GGCC 2 cut(s) 122, 282
HapII CCGG 2 cut(s) 74, 467
HhaI GCGC 1 cut(s) 673
Hin1II CATG 7 cut(s) 52, 227, 749, 1244, 1312, 1416, 1429
Hin6I GCGC 1 cut(s) 671
HinP1I GCGC 1 cut(s) 671
HincII GTYRAC 2 cut(s) 381, 934
HindII GTYRAC 2 cut(s) 381, 934
HinfI GANTC 8 cut(s) 424, 454, 609, 922, 1159, 1279, 1377, 1409
HpaI GTTAAC 1 cut(s) 934
HpaII CCGG 2 cut(s) 74, 467
HphI GGTGA 3 cut(s) 16, 916, 1028
Hpy166II GTNNAC 4 cut(s) 41, 381, 934, 1387
Hpy188I TCNGA 2 cut(s) 525, 1158
Hpy188III TCNNGA 6 cut(s) 111, 820, 1003, 1117, 1276, 1283
Hpy8I GTNNAC 4 cut(s) 41, 381, 934, 1387
Hpy99I CGWCG 2 cut(s) 271, 385
HpyAV CCTTC 4 cut(s) 550, 673, 817, 1332
HpyCH4III ACNGT 4 cut(s) 385, 708, 964, 1077
HpyF10VI GCNNNNNNNGC 8 cut(s) 59, 296, 646, 659, 668, 701, 722, 1223
HpyF3I CTNAG 6 cut(s) 231, 600, 636, 1104, 1260, 1364
Hsp92II CATG 7 cut(s) 52, 227, 749, 1244, 1312, 1416, 1429
HspAI GCGC 1 cut(s) 671
KpnI GGTACC 1 cut(s) 599
Ksp22I TGATCA 1 cut(s) 897
KspAI GTTAAC 1 cut(s) 934
Kzo9I GATC 8 cut(s) 9, 441, 499, 678, 897, 1113, 1123, 1245
LmnI GCTCC 6 cut(s) 23, 144, 287, 722, 1108, 1235
Lsp1109I GCAGC 5 cut(s) 2, 286, 338, 640, 1180
LweI GCATC 1 cut(s) 1204
MabI ACCWGGT 1 cut(s) 837
MaeI CTAG 3 cut(s) 276, 792, 1176
MaeIII GTNAC 2 cut(s) 1016, 1099
MalI GATC 8 cut(s) 11, 443, 501, 680, 899, 1115, 1125, 1247
MboI GATC 8 cut(s) 9, 441, 499, 678, 897, 1113, 1123, 1245
MfeI CAATTG 4 cut(s) 78, 408, 492, 1392
MflI RGATCY 6 cut(s) 9, 499, 678, 1113, 1123, 1245
MhlI GDGCHC 1 cut(s) 1240
MluCI AATT 9 cut(s) 78, 114, 144, 408, 492, 589, 768, 1139, 1392
MlyI GAGTC 3 cut(s) 418, 1273, 1403
MmeI TCCRAC 3 cut(s) 381, 486, 1336
MroXI GAANNNNTTC 1 cut(s) 197
MseI TTAA 5 cut(s) 258, 690, 786, 933, 1350
MslI CAYNNNNRTG 2 cut(s) 53, 212
MspA1I CMGCKG 3 cut(s) 212, 545, 635
MspI CCGG 2 cut(s) 74, 467
MspR9I CCNGG 6 cut(s) 124, 156, 284, 467, 566, 839
MunI CAATTG 4 cut(s) 78, 408, 492, 1392
Mva1269I GAATGC 2 cut(s) 998, 1251
MvaI CCWGG 5 cut(s) 124, 156, 284, 566, 839
MwoI GCNNNNNNNGC 8 cut(s) 59, 296, 646, 659, 668, 701, 722, 1223
NciI CCSGG 1 cut(s) 467
NcoI CCATGG 1 cut(s) 48
NdeII GATC 8 cut(s) 9, 441, 499, 678, 897, 1113, 1123, 1245
NheI GCTAGC 1 cut(s) 1175
NlaIII CATG 7 cut(s) 52, 227, 749, 1244, 1312, 1416, 1429
NlaIV GGNNCC 4 cut(s) 387, 597, 775, 1151
NmeAIII GCCGAG 1 cut(s) 505
NmuCI GTSAC 1 cut(s) 1016
NspI RCATGY 3 cut(s) 227, 1312, 1429
NspV TTCGAA 1 cut(s) 644
OliI CACNNNNGTG 1 cut(s) 212
PaeI GCATGC 1 cut(s) 1312
PaqCI CACCTGC 1 cut(s) 1042
PceI AGGCCT 1 cut(s) 282
PctI GAATGC 2 cut(s) 998, 1251
PdmI GAANNNNTTC 1 cut(s) 197
PfeI GAWTC 5 cut(s) 454, 609, 922, 1159, 1377
PkrI GCNGC 6 cut(s) 17, 121, 301, 328, 655, 1170
PleI GAGTC 3 cut(s) 418, 1273, 1403
PpsI GAGTC 3 cut(s) 418, 1273, 1403
Psp124BI GAGCTC 1 cut(s) 1240
Psp6I CCWGG 5 cut(s) 122, 154, 282, 564, 837
PspFI CCCAGC 1 cut(s) 1060
PspGI CCWGG 5 cut(s) 122, 154, 282, 564, 837
PspN4I GGNNCC 4 cut(s) 387, 597, 775, 1151
PspPI GGNCC 3 cut(s) 41, 773, 1150
PstI CTGCAG 3 cut(s) 1098, 1170, 1435
PstNI CAGNNNCTG 1 cut(s) 457
PsuI RGATCY 6 cut(s) 9, 499, 678, 1113, 1123, 1245
PvuII CAGCTG 2 cut(s) 212, 635
RsaI GTAC 2 cut(s) 449, 597
RsaNI GTAC 2 cut(s) 448, 596
RseI CAYNNNNRTG 2 cut(s) 53, 212
SacI GAGCTC 1 cut(s) 1240
SalI GTCGAC 1 cut(s) 379
SaqAI TTAA 5 cut(s) 258, 690, 786, 933, 1350
SatI GCNGC 6 cut(s) 16, 120, 300, 327, 654, 1169
Sau3AI GATC 8 cut(s) 9, 441, 499, 678, 897, 1113, 1123, 1245
Sau96I GGNCC 3 cut(s) 41, 773, 1150
SbfI CCTGCAGG 1 cut(s) 1098
SchI GAGTC 3 cut(s) 418, 1273, 1403
ScrFI CCNGG 6 cut(s) 124, 156, 284, 467, 566, 839
SdaI CCTGCAGG 1 cut(s) 1098
SduI GDGCHC 1 cut(s) 1240
SexAI ACCWGGT 1 cut(s) 837
SfaNI GCATC 1 cut(s) 1204
SfcI CTRYAG 3 cut(s) 1094, 1166, 1431
SfuI TTCGAA 1 cut(s) 644
SinI GGWCC 3 cut(s) 41, 773, 1150
SmiMI CAYNNNNRTG 2 cut(s) 53, 212
SmlI CTYRAG 3 cut(s) 65, 161, 1418
SmoI CTYRAG 3 cut(s) 65, 161, 1418
SphI GCATGC 1 cut(s) 1312
Sse8387I CCTGCAGG 1 cut(s) 1098
Sse9I AATT 9 cut(s) 78, 114, 144, 408, 492, 589, 768, 1139, 1392
SseBI AGGCCT 1 cut(s) 282
SsiI CCGC 3 cut(s) 119, 401, 543
SspMI CTAG 3 cut(s) 276, 792, 1176
SstI GAGCTC 1 cut(s) 1240
StuI AGGCCT 1 cut(s) 282
StyD4I CCNGG 6 cut(s) 122, 154, 282, 465, 564, 837
StyI CCWWGG 2 cut(s) 48, 1404
TaaI ACNGT 4 cut(s) 385, 708, 964, 1077
TaqI TCGA 7 cut(s) 380, 444, 644, 925, 1130, 1181, 1284
TaqII GACCGA 1 cut(s) 531
TasI AATT 9 cut(s) 78, 114, 144, 408, 492, 589, 768, 1139, 1392
TauI GCSGC 1 cut(s) 122
TfiI GAWTC 5 cut(s) 454, 609, 922, 1159, 1377
Tru1I TTAA 5 cut(s) 258, 690, 786, 933, 1350
Tru9I TTAA 5 cut(s) 258, 690, 786, 933, 1350
TscAI CASTG 7 cut(s) 60, 111, 185, 396, 711, 1207, 1440
TseFI GTSAC 1 cut(s) 1016
TseI GCWGC 5 cut(s) 15, 299, 326, 653, 1168
Tsp45I GTSAC 1 cut(s) 1016
TspDTI ATGAA 4 cut(s) 1148, 1151, 1205, 1369
TspRI CASTG 7 cut(s) 60, 111, 185, 396, 711, 1207, 1440
VpaK11BI GGWCC 3 cut(s) 41, 773, 1150
XapI RAATTY 1 cut(s) 1139
XceI RCATGY 3 cut(s) 227, 1312, 1429
XcmI CCANNNNNNNNNTGG 2 cut(s) 364, 664
XmiI GTMKAC 2 cut(s) 380, 1386
XmnI GAANNNNTTC 1 cut(s) 197
XspI CTAG 3 cut(s) 276, 792, 1176
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.