Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G23300 |
| fragaria_vesca | FvH4_3g07800 FvH4_3g07800 FvH4_3g07800 |
| malus_domestica | MD05G1301200.v1.1 MD10G1280100.v1.1 |
| prunus_persica | Prupe.4G061300_v2.0.a1 Prupe.6G003700_v2.0.a1 Prupe.6G003700_v2.0.a1 Prupe.6G003700_v2.0.a1 |
| pyrus_communis | pycom05g27900 pycom10g23390 |
| rosa_chinensis | RchiOBHm_Chr5g0010781 RchiOBHm_Chr5g0050031 RchiOBHm_Chr5g0064321 |
| rosa_laevigata | RLG00000031779 |
| rosa_multiflora | Rmu_sc0000109.1_g000020 |
| rosa_roxburghii | Rroxscaffold_1G00065600 |
| rosa_rugosa | Rorug04G0424400 Rorug04G0424500 Rorug04G0452200 Rorug04G0452300 Rorug04G0452400 Rorug06G0421900 |
| rosa_samantha | Rh5AG084600 Rh5BG340700 Rh5CG092100 Rh5DG079500 Rh5DG353400 |
| rosa_wichuraiana | Rw0G000560 Rw0G022270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 45 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 187 |
| AgsI | TTSAA | 1 cut(s) | 8 |
| AluBI | AGCT | 1 cut(s) | 50 |
| AluI | AGCT | 1 cut(s) | 50 |
| AoxI | GGCC | 2 cut(s) | 82, 171 |
| ApeKI | GCWGC | 2 cut(s) | 50, 146 |
| AspS9I | GGNCC | 3 cut(s) | 28, 83, 172 |
| AsuHPI | GGTGA | 1 cut(s) | 86 |
| AvaII | GGWCC | 1 cut(s) | 28 |
| BauI | CACGAG | 2 cut(s) | 54, 98 |
| BbvI | GCAGC | 2 cut(s) | 37, 133 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 125, 159 |
| BciVI | GTATCC | 1 cut(s) | 242 |
| BfuI | GTATCC | 1 cut(s) | 242 |
| BglII | AGATCT | 1 cut(s) | 130 |
| BisI | GCNGC | 2 cut(s) | 51, 147 |
| BlsI | GCNGC | 2 cut(s) | 52, 148 |
| Bme18I | GGWCC | 1 cut(s) | 28 |
| BmgT120I | GGNCC | 3 cut(s) | 28, 83, 172 |
| BpmI | CTGGAG | 1 cut(s) | 96 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 187 |
| Bse3DI | GCAATG | 2 cut(s) | 74, 92 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 187 |
| BseMI | GCAATG | 2 cut(s) | 74, 92 |
| BseRI | GAGGAG | 1 cut(s) | 78 |
| BseXI | GCAGC | 2 cut(s) | 37, 133 |
| BshFI | GGCC | 2 cut(s) | 84, 173 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 187 |
| BsnI | GGCC | 2 cut(s) | 84, 173 |
| Bsp143I | GATC | 1 cut(s) | 130 |
| BspANI | GGCC | 2 cut(s) | 84, 173 |
| BsrDI | GCAATG | 2 cut(s) | 74, 92 |
| BssMI | GATC | 1 cut(s) | 130 |
| BssSI | CACGAG | 2 cut(s) | 54, 98 |
| Bst2BI | CACGAG | 2 cut(s) | 54, 98 |
| BstKTI | GATC | 1 cut(s) | 133 |
| BstMBI | GATC | 1 cut(s) | 130 |
| BstV1I | GCAGC | 2 cut(s) | 37, 133 |
| BstX2I | RGATCY | 1 cut(s) | 130 |
| BstYI | RGATCY | 1 cut(s) | 130 |
| BsuI | GTATCC | 1 cut(s) | 242 |
| BsuRI | GGCC | 2 cut(s) | 84, 173 |
| Cfr13I | GGNCC | 3 cut(s) | 28, 83, 172 |
| Csp6I | GTAC | 1 cut(s) | 44 |
| CviAII | CATG | 1 cut(s) | 259 |
| CviJI | RGCY | 3 cut(s) | 50, 84, 173 |
| CviKI_1 | RGCY | 3 cut(s) | 50, 84, 173 |
| CviQI | GTAC | 1 cut(s) | 44 |
| DpnI | GATC | 1 cut(s) | 132 |
| DpnII | GATC | 1 cut(s) | 130 |
| DraI | TTTAAA | 1 cut(s) | 213 |
| Eco47I | GGWCC | 1 cut(s) | 28 |
| EcoO109I | RGGNCCY | 2 cut(s) | 28, 83 |
| FaeI | CATG | 1 cut(s) | 262 |
| FatI | CATG | 1 cut(s) | 258 |
| Fnu4HI | GCNGC | 2 cut(s) | 51, 147 |
| Fsp4HI | GCNGC | 2 cut(s) | 51, 147 |
| GluI | GCNGC | 2 cut(s) | 51, 147 |
| GsuI | CTGGAG | 1 cut(s) | 96 |
| HaeIII | GGCC | 2 cut(s) | 84, 173 |
| Hin1II | CATG | 1 cut(s) | 262 |
| HphI | GGTGA | 1 cut(s) | 86 |
| Hpy188III | TCNNGA | 4 cut(s) | 56, 100, 113, 134 |
| HpyAV | CCTTC | 3 cut(s) | 34, 74, 191 |
| HpyCH4V | TGCA | 2 cut(s) | 67, 149 |
| Hsp92II | CATG | 1 cut(s) | 262 |
| Kzo9I | GATC | 1 cut(s) | 130 |
| LmnI | GCTCC | 1 cut(s) | 115 |
| LpnPI | CCDG | 1 cut(s) | 126 |
| Lsp1109I | GCAGC | 2 cut(s) | 37, 133 |
| MalI | GATC | 1 cut(s) | 132 |
| MboI | GATC | 1 cut(s) | 130 |
| MboII | GAAGA | 5 cut(s) | 24, 49, 89, 140, 149 |
| MflI | RGATCY | 1 cut(s) | 130 |
| MluCI | AATT | 1 cut(s) | 105 |
| MnlI | CCTC | 2 cut(s) | 96, 99 |
| MseI | TTAA | 3 cut(s) | 23, 212, 224 |
| NdeII | GATC | 1 cut(s) | 130 |
| NlaIII | CATG | 1 cut(s) | 262 |
| PkrI | GCNGC | 2 cut(s) | 52, 148 |
| PpuMI | RGGWCCY | 1 cut(s) | 28 |
| Psp5II | RGGWCCY | 1 cut(s) | 28 |
| PspPI | GGNCC | 3 cut(s) | 28, 83, 172 |
| PspPPI | RGGWCCY | 1 cut(s) | 28 |
| PsuI | RGATCY | 1 cut(s) | 130 |
| RsaI | GTAC | 1 cut(s) | 45 |
| RsaNI | GTAC | 1 cut(s) | 44 |
| SaqAI | TTAA | 3 cut(s) | 23, 212, 224 |
| SatI | GCNGC | 2 cut(s) | 51, 147 |
| Sau3AI | GATC | 1 cut(s) | 130 |
| Sau96I | GGNCC | 3 cut(s) | 28, 83, 172 |
| SetI | ASST | 3 cut(s) | 30, 45, 52 |
| SinI | GGWCC | 1 cut(s) | 28 |
| Sse9I | AATT | 1 cut(s) | 105 |
| TaqI | TCGA | 1 cut(s) | 135 |
| TasI | AATT | 1 cut(s) | 105 |
| Tru1I | TTAA | 3 cut(s) | 23, 212, 224 |
| Tru9I | TTAA | 3 cut(s) | 23, 212, 224 |
| TseI | GCWGC | 2 cut(s) | 50, 146 |
| TspDTI | ATGAA | 1 cut(s) | 75 |
| TspGWI | ACGGA | 1 cut(s) | 207 |
| VpaK11BI | GGWCC | 1 cut(s) | 28 |