Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0004775

Physical Location & Seq

Genomic Coordinates Reverse (-)

87249314 .. 87253521

Gene Structure 4208 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00065600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1377 bp

ATGGCGGCAAGGGCTTCAAGAAAATTACTGAGAGACTTTGTGCTGAGAAGAACAGCATGCACAGCTCCAATTGGAGCTCCCAGGCATTGCTCCTCTGCTGCACAAAACCCTCCAAAGATTCCAAAGATCCCTCATTTTTCCAAGAGGGGGTTGTTTACTGCAGCCACCTTGGGGTTGGTTATTGCTGGAGGAGCTTATGCAAGCACTGTAGATGAAGCAACTTTCTGTGGATGGCTATTCTCAGCTACCAAACTTGTGAATCCGTTCTTTGCTCTTCTGGATCCAGAGGTTGCTCATAGACTGGGAGTCTCAGCCGCAGCACGTGGTTGGATTCCTAGGGAGAAGAGACCAGATCCACCTAATTTAGGCCTAGAAGTTTGGGGAAGGAAGTTCTCAAACCCTATAGGTCTAGCTGCTGGCTTTGATAAGAATGCTGAGGCTGTTGATGGTTTACTGGGTTTAGGATTTGGCTTTGTAGAGATTGGCTCTGTAACCCCTGTTCCACAGGAGGGTAATCCAAAGCCTCGTATCTTCAGATTGCGTGACGAAGGAGCTATCATCAATCGATGTGGCTTTAATAGTGAAGGAATTATTGCCGTTGCAAAGCGGTTGGGAATCCAGCATGGTAAGAGGATGTTGGATGAAACTTCAAATACATCATCTTCGTCAGCTGATGAAGCCAAAACTGGAGGAAAATCTGGCCCTGGCATACTGGGCGTGAATCTTGGAAAAAATAAGACAAGCGAAGATGCTGCTTCAGATTATGTACAAGGGGTTCATTCCTTGTCCCAGTATGCCGATTACTTGGTTATTAATGTTTCATCACCCAACACCCCCGGGTTACGTATGCTTCAAGGAAGAAAGCAGTTAAAGGACCTTGTGAAGAAGGTACAAGCTGCTCGTGATGAAATGCAATGGGGTGAAGAGGGCCCTCCTCCATTGCTCGTGAAAATTGCTCCAGATTTGTCTAAAGAAGATCTCGAAGATATTGCTGCAGTGGCCCTTGCCCTTCGCTTGGACGGATTGATTATATCAAACACAACTGTTTCAAGACCAGAGTCTGTTAGTAGAAACCCAGTGGCTTCTGAAGCTGGTGGCTTGAGTGGGAAACCACTATTTGATACCTCTACCAGACTCTTAAAGGATATGTACCTGTTGACAAGGGGGAAGATTCCTTTAGTAGGGTGTGGGGGTATTAGTAGCGGCGAGGACGCTTATCGAAAAATACGAGCTGGAGCAACTCTTGTTCAGCTTTATACAGCGTTTGCCTATGGGGGGCCTGCTCTCATTCCCCAGATAAAGGCTGAATTGACCGAATGCTTAGAAAGAGATGGCTTCAAAACCGTTGTTGAAGCAGTTGGTGCAGATTGCAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004152 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006220 GO:0006221 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009165 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009987 GO:0016491 GO:0016627 GO:0016635 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0034641 GO:0034654 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046390 GO:0046483 GO:0055086 GO:0055114 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00240 ko01100 map00240 map01100

Pfam Domains

Protein Families

DHO_dh

Protein Analysis

458

Amino Acids

48.74

Weight (kDa)

9.19

Isoelectric Point (pI)

31.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DHO_dh	PF01180	124 - 441	7.9e-88	Dihydroorotate dehydrogenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004775)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23300
fragaria_vesca	FvH4_3g07800 FvH4_3g07800 FvH4_3g07800
malus_domestica	MD05G1301200.v1.1 MD10G1280100.v1.1
prunus_persica	Prupe.4G061300_v2.0.a1 Prupe.6G003700_v2.0.a1 Prupe.6G003700_v2.0.a1 Prupe.6G003700_v2.0.a1
pyrus_communis	pycom05g27900 pycom10g23390
rosa_chinensis	RchiOBHm_Chr5g0010781 RchiOBHm_Chr5g0050031 RchiOBHm_Chr5g0064321
rosa_laevigata	RLG00000031779
rosa_multiflora	Rmu_sc0000109.1_g000020
rosa_roxburghii	Rroxscaffold_1G00065600
rosa_rugosa	Rorug04G0424400 Rorug04G0424500 Rorug04G0452200 Rorug04G0452300 Rorug04G0452400 Rorug06G0421900
rosa_samantha	Rh5AG084600 Rh5BG340700 Rh5CG092100 Rh5DG079500 Rh5DG353400
rosa_wichuraiana	Rw0G000560 Rw0G022270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	4 cut(s)	5, 315, 607, 1203
AclWI	GGATC	4 cut(s)	121, 275, 288, 347
AcuI	CTGAAG	3 cut(s)	517, 741, 1107
AcvI	CACGTG	1 cut(s)	323
AfaI	GTAC	3 cut(s)	768, 891, 1151
AfiI	CCNNNNNNNGG	8 cut(s)	147, 171, 365, 509, 1015, 1181, 1275, 1300
AgsI	TTSAA	6 cut(s)	18, 651, 854, 1050, 1339, 1352
AhdI	GACNNNNNGTC	1 cut(s)	305
AjnI	CCWGG	2 cut(s)	80, 703
Alw21I	GWGCWC	1 cut(s)	79
Alw26I	GTCTC	3 cut(s)	27, 313, 340
AlwI	GGATC	4 cut(s)	121, 275, 288, 347
AlwNI	CAGNNNCTG	1 cut(s)	1061
Ama87I	CYCGRG	1 cut(s)	836
AoxI	GGCC	5 cut(s)	367, 700, 928, 999, 1277
ApaI	GGGCCC	1 cut(s)	932
ApeKI	GCWGC	7 cut(s)	98, 161, 317, 413, 752, 896, 992
AseI	ATTAAT	1 cut(s)	813
Asp700I	GAANNNNTTC	1 cut(s)	263
AspA2I	CCTAGG	1 cut(s)	335
AspS9I	GGNCC	6 cut(s)	701, 874, 928, 929, 1000, 1277
AsuC2I	CCSGG	2 cut(s)	837, 838
AsuHPI	GGTGA	2 cut(s)	816, 932
AvaI	CYCGRG	1 cut(s)	836
AvaII	GGWCC	1 cut(s)	874
AvrII	CCTAGG	1 cut(s)	335
BaeGI	GKGCMC	1 cut(s)	932
BamHI	GGATCC	1 cut(s)	280
BanII	GRGCYC	2 cut(s)	79, 932
BauI	CACGAG	2 cut(s)	900, 944
BbrPI	CACGTG	1 cut(s)	323
Bbv12I	GWGCWC	1 cut(s)	79
BbvCI	CCTCAGC	1 cut(s)	435
BbvI	GCAGC	7 cut(s)	85, 173, 329, 400, 739, 883, 979
BccI	CCATC	3 cut(s)	225, 440, 1325
BceAI	ACGGC	1 cut(s)	581
BcgI	CGANNNNNNTGC	4 cut(s)	734, 768, 971, 1005
BciT130I	CCWGG	2 cut(s)	82, 705
BcnI	CCSGG	2 cut(s)	837, 838
BcoDI	GTCTC	3 cut(s)	27, 313, 340
BfaI	CTAG	3 cut(s)	336, 371, 410
BfmI	CTRYAG	4 cut(s)	159, 207, 402, 993
BglII	AGATCT	1 cut(s)	976
BlnI	CCTAGG	1 cut(s)	335
Bme1390I	CCNGG	4 cut(s)	82, 705, 837, 838
Bme18I	GGWCC	1 cut(s)	874
BmeRI	GACNNNNNGTC	1 cut(s)	305
BmeT110I	CYCGRG	1 cut(s)	836
BmgT120I	GGNCC	6 cut(s)	701, 874, 928, 929, 1000, 1277
BmiI	GGNNCC	3 cut(s)	282, 930, 1278
BmrFI	CCNGG	4 cut(s)	82, 705, 837, 838
BmrI	ACTGGG	5 cut(s)	311, 464, 722, 784, 1070
BmsI	GCATC	1 cut(s)	739
BmuI	ACTGGG	5 cut(s)	311, 464, 722, 784, 1070
BoxI	GACNNNNGTC	1 cut(s)	1057
BplI	GAGNNNNNCTC	2 cut(s)	470, 502
BpmI	CTGGAG	4 cut(s)	207, 708, 942, 1254
Bpu10I	CCTNAGC	1 cut(s)	435
BpuEI	CTTGAG	1 cut(s)	1120
BpuMI	CCSGG	2 cut(s)	837, 838
Bsa29I	ATCGAT	1 cut(s)	565
BsaAI	YACGTR	2 cut(s)	323, 845
BsaI	GGTCTC	1 cut(s)	340
BsaJI	CCNNGG	6 cut(s)	80, 168, 335, 703, 835, 836
Bsc4I	CCNNNNNNNGG	8 cut(s)	147, 171, 365, 509, 1015, 1181, 1275, 1300
Bse1I	ACTGG	6 cut(s)	306, 459, 691, 717, 790, 1076
Bse3DI	GCAATG	3 cut(s)	85, 920, 938
BseBI	CCWGG	2 cut(s)	82, 705
BseCI	ATCGAT	1 cut(s)	565
BseDI	CCNNGG	6 cut(s)	80, 168, 335, 703, 835, 836
BseGI	GGATG	3 cut(s)	236, 639, 646
BseLI	CCNNNNNNNGG	8 cut(s)	147, 171, 365, 509, 1015, 1181, 1275, 1300
BseMI	GCAATG	3 cut(s)	85, 920, 938
BseMII	CTCAG	5 cut(s)	20, 35, 255, 324, 426
BseNI	ACTGG	6 cut(s)	306, 459, 691, 717, 790, 1076
BseRI	GAGGAG	3 cut(s)	82, 204, 924
BseSI	GKGCMC	1 cut(s)	932
BseXI	GCAGC	7 cut(s)	85, 173, 329, 400, 739, 883, 979
BsgI	GTGCAG	1 cut(s)	84
BshFI	GGCC	5 cut(s)	369, 702, 930, 1001, 1279
BshVI	ATCGAT	1 cut(s)	565
BsiHKAI	GWGCWC	1 cut(s)	79
BsiHKCI	CYCGRG	1 cut(s)	836
BsiSI	CCGG	1 cut(s)	837
BslFI	GGGAC	1 cut(s)	772
BslI	CCNNNNNNNGG	8 cut(s)	147, 171, 365, 509, 1015, 1181, 1275, 1300
BsmAI	GTCTC	3 cut(s)	27, 313, 340
BsmFI	GGGAC	1 cut(s)	772
BsmI	GAATGC	2 cut(s)	436, 1322
BsnI	GGCC	5 cut(s)	369, 702, 930, 1001, 1279
Bso31I	GGTCTC	1 cut(s)	340
BsoBI	CYCGRG	1 cut(s)	836
Bsp120I	GGGCCC	1 cut(s)	928
Bsp1286I	GDGCHC	2 cut(s)	79, 932
Bsp1407I	TGTACA	1 cut(s)	766
Bsp143I	GATC	4 cut(s)	126, 280, 352, 976
BspACI	CCGC	4 cut(s)	5, 315, 607, 1203
BspANI	GGCC	5 cut(s)	369, 702, 930, 1001, 1279
BspCNI	CTCAG	5 cut(s)	21, 36, 254, 323, 427
BspDI	ATCGAT	1 cut(s)	565
BspLI	GGNNCC	3 cut(s)	282, 930, 1278
BspMAI	CTGCAG	2 cut(s)	163, 997
BspPI	GGATC	4 cut(s)	121, 275, 288, 347
BspQI	GCTCTTC	1 cut(s)	279
BspTNI	GGTCTC	1 cut(s)	340
BsrDI	GCAATG	3 cut(s)	85, 920, 938
BsrGI	TGTACA	1 cut(s)	766
BsrI	ACTGG	6 cut(s)	306, 459, 691, 717, 790, 1076
BssECI	CCNNGG	6 cut(s)	80, 168, 335, 703, 835, 836
BssMI	GATC	4 cut(s)	126, 280, 352, 976
BssSI	CACGAG	2 cut(s)	900, 944
BssT1I	CCWWGG	2 cut(s)	168, 335
Bst2BI	CACGAG	2 cut(s)	900, 944
Bst2UI	CCWGG	2 cut(s)	82, 705
Bst4CI	ACNGT	3 cut(s)	208, 1045, 1345
Bst6I	CTCTTC	3 cut(s)	279, 338, 918
BstAPI	GCANNNNNTGC	1 cut(s)	1361
BstAUI	TGTACA	1 cut(s)	766
BstBAI	YACGTR	2 cut(s)	323, 845
BstC8I	GCNNGC	4 cut(s)	58, 202, 418, 1281
BstDEI	CTNAG	6 cut(s)	29, 44, 241, 310, 435, 1321
BstENI	CCTNNNNNAGG	2 cut(s)	363, 1179
BstF5I	GGATG	3 cut(s)	236, 639, 646
BstKTI	GATC	4 cut(s)	129, 283, 355, 979
BstMAI	GTCTC	3 cut(s)	27, 313, 340
BstMBI	GATC	4 cut(s)	126, 280, 352, 976
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 62, 191, 677, 714, 998, 1088, 1361
BstNI	CCWGG	2 cut(s)	82, 705
BstNSI	RCATGY	1 cut(s)	60
BstPAI	GACNNNNGTC	1 cut(s)	1057
BstSCI	CCNGG	4 cut(s)	80, 703, 835, 836
BstSFI	CTRYAG	4 cut(s)	159, 207, 402, 993
BstSLI	GKGCMC	1 cut(s)	932
BstSNI	TACGTA	1 cut(s)	845
BstV1I	GCAGC	7 cut(s)	85, 173, 329, 400, 739, 883, 979
BstX2I	RGATCY	4 cut(s)	126, 280, 352, 976
BstYI	RGATCY	4 cut(s)	126, 280, 352, 976
Bsu15I	ATCGAT	1 cut(s)	565
BsuRI	GGCC	5 cut(s)	369, 702, 930, 1001, 1279
BsuTUI	ATCGAT	1 cut(s)	565
BtsCI	GGATG	3 cut(s)	236, 639, 646
BtsI	GCAGTG	1 cut(s)	1002
BtsIMutI	CAGTG	3 cut(s)	204, 1002, 1083
Cac8I	GCNNGC	4 cut(s)	58, 202, 418, 1281
CaiI	CAGNNNCTG	1 cut(s)	1061
Cfr13I	GGNCC	6 cut(s)	701, 874, 928, 929, 1000, 1277
Cfr9I	CCCGGG	1 cut(s)	836
ClaI	ATCGAT	1 cut(s)	565
CseI	GACGC	1 cut(s)	1220
Csp6I	GTAC	3 cut(s)	767, 890, 1150
CspCI	CAANNNNNGTGG	2 cut(s)	550, 585
CviAII	CATG	2 cut(s)	57, 623
CviQI	GTAC	3 cut(s)	767, 890, 1150
DdeI	CTNAG	6 cut(s)	29, 44, 241, 310, 435, 1321
DpnI	GATC	4 cut(s)	128, 282, 354, 978
DpnII	GATC	4 cut(s)	126, 280, 352, 976
DriI	GACNNNNNGTC	1 cut(s)	305
Eam1104I	CTCTTC	3 cut(s)	279, 338, 918
Eam1105I	GACNNNNNGTC	1 cut(s)	305
EarI	CTCTTC	3 cut(s)	279, 338, 918
Ecl136II	GAGCTC	1 cut(s)	77
Eco105I	TACGTA	1 cut(s)	845
Eco130I	CCWWGG	2 cut(s)	168, 335
Eco147I	AGGCCT	1 cut(s)	369
Eco24I	GRGCYC	2 cut(s)	79, 932
Eco31I	GGTCTC	1 cut(s)	340
Eco47I	GGWCC	1 cut(s)	874
Eco53kI	GAGCTC	1 cut(s)	77
Eco57I	CTGAAG	3 cut(s)	517, 741, 1107
Eco72I	CACGTG	1 cut(s)	323
Eco88I	CYCGRG	1 cut(s)	836
EcoICRI	GAGCTC	1 cut(s)	77
EcoNI	CCTNNNNNAGG	2 cut(s)	363, 1179
EcoO109I	RGGNCCY	4 cut(s)	874, 928, 929, 1277
EcoRII	CCWGG	2 cut(s)	80, 703
EcoT14I	CCWWGG	2 cut(s)	168, 335
EcoT38I	GRGCYC	2 cut(s)	79, 932
ErhI	CCWWGG	2 cut(s)	168, 335
FaeI	CATG	2 cut(s)	60, 626
FaqI	GGGAC	1 cut(s)	772
FatI	CATG	2 cut(s)	56, 622
FokI	GGATG	3 cut(s)	243, 646, 653
FriOI	GRGCYC	2 cut(s)	79, 932
FspBI	CTAG	3 cut(s)	336, 371, 410
GsuI	CTGGAG	4 cut(s)	207, 708, 942, 1254
HaeIII	GGCC	5 cut(s)	369, 702, 930, 1001, 1279
HapII	CCGG	1 cut(s)	837
HgaI	GACGC	1 cut(s)	1220
Hin1II	CATG	2 cut(s)	60, 626
HincII	GTYRAC	1 cut(s)	1158
HindII	GTYRAC	1 cut(s)	1158
HinfI	GANTC	9 cut(s)	118, 259, 306, 331, 615, 721, 1058, 1134, 1171
HpaII	CCGG	1 cut(s)	837
HphI	GGTGA	2 cut(s)	816, 932
Hpy166II	GTNNAC	3 cut(s)	156, 452, 1158
Hpy188I	TCNGA	3 cut(s)	536, 760, 1087
Hpy188III	TCNNGA	8 cut(s)	18, 278, 284, 902, 946, 959, 980, 1050
Hpy8I	GTNNAC	3 cut(s)	156, 452, 1158
HpyAV	CCTTC	5 cut(s)	378, 542, 578, 880, 1019
HpyCH4III	ACNGT	3 cut(s)	208, 1045, 1345
HpyCH4IV	ACGT	2 cut(s)	322, 844
HpyCH4V	TGCA	9 cut(s)	60, 101, 161, 200, 602, 913, 995, 1364, 1371
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 62, 191, 677, 714, 998, 1088, 1361
HpyF3I	CTNAG	6 cut(s)	29, 44, 241, 310, 435, 1321
HpySE526I	ACGT	2 cut(s)	322, 844
Hsp92II	CATG	2 cut(s)	60, 626
Kzo9I	GATC	4 cut(s)	126, 280, 352, 976
LguI	GCTCTTC	1 cut(s)	279
LmnI	GCTCC	8 cut(s)	70, 74, 82, 95, 191, 551, 961, 1235
Lsp1109I	GCAGC	7 cut(s)	85, 173, 329, 400, 739, 883, 979
LweI	GCATC	1 cut(s)	739
MaeI	CTAG	3 cut(s)	336, 371, 410
MaeII	ACGT	2 cut(s)	322, 844
MaeIII	GTNAC	3 cut(s)	490, 542, 840
MalI	GATC	4 cut(s)	128, 282, 354, 978
MboI	GATC	4 cut(s)	126, 280, 352, 976
MfeI	CAATTG	1 cut(s)	69
MflI	RGATCY	4 cut(s)	126, 280, 352, 976
MhlI	GDGCHC	2 cut(s)	79, 932
MluCI	AATT	6 cut(s)	23, 69, 361, 588, 951, 1307
MlyI	GAGTC	3 cut(s)	315, 1067, 1128
MmeI	TCCRAC	2 cut(s)	308, 618
MroXI	GAANNNNTTC	1 cut(s)	263
MseI	TTAA	4 cut(s)	576, 813, 869, 1139
MspA1I	CMGCKG	1 cut(s)	671
MspI	CCGG	1 cut(s)	837
MspR9I	CCNGG	4 cut(s)	82, 705, 837, 838
MunI	CAATTG	1 cut(s)	69
Mva1269I	GAATGC	2 cut(s)	436, 1322
MvaI	CCWGG	2 cut(s)	82, 705
MwoI	GCNNNNNNNGC	8 cut(s)	11, 62, 191, 677, 714, 998, 1088, 1361
NciI	CCSGG	2 cut(s)	837, 838
NdeII	GATC	4 cut(s)	126, 280, 352, 976
NlaIII	CATG	2 cut(s)	60, 626
NlaIV	GGNNCC	3 cut(s)	282, 930, 1278
NmuCI	GTSAC	1 cut(s)	542
NspI	RCATGY	1 cut(s)	60
PaeI	GCATGC	1 cut(s)	60
PceI	AGGCCT	1 cut(s)	369
PciSI	GCTCTTC	1 cut(s)	279
PcsI	WCGNNNNNNNCGW	1 cut(s)	1225
PctI	GAATGC	2 cut(s)	436, 1322
PdmI	GAANNNNTTC	1 cut(s)	263
PfeI	GAWTC	6 cut(s)	118, 259, 331, 615, 721, 1171
PleI	GAGTC	3 cut(s)	314, 1066, 1128
PmaCI	CACGTG	1 cut(s)	323
PmlI	CACGTG	1 cut(s)	323
PpsI	GAGTC	3 cut(s)	314, 1066, 1128
Ppu21I	YACGTR	2 cut(s)	323, 845
PpuMI	RGGWCCY	1 cut(s)	874
PshAI	GACNNNNGTC	1 cut(s)	1057
PshBI	ATTAAT	1 cut(s)	813
Psp124BI	GAGCTC	1 cut(s)	79
Psp5II	RGGWCCY	1 cut(s)	874
Psp6I	CCWGG	2 cut(s)	80, 703
PspCI	CACGTG	1 cut(s)	323
PspGI	CCWGG	2 cut(s)	80, 703
PspN4I	GGNNCC	3 cut(s)	282, 930, 1278
PspOMI	GGGCCC	1 cut(s)	928
PspPI	GGNCC	6 cut(s)	701, 874, 928, 929, 1000, 1277
PspPPI	RGGWCCY	1 cut(s)	874
PsrI	GAACNNNNNNTAC	4 cut(s)	483, 515, 759, 791
PstI	CTGCAG	2 cut(s)	163, 997
PstNI	CAGNNNCTG	1 cut(s)	1061
PsuI	RGATCY	4 cut(s)	126, 280, 352, 976
PvuII	CAGCTG	1 cut(s)	671
RsaI	GTAC	3 cut(s)	768, 891, 1151
RsaNI	GTAC	3 cut(s)	767, 890, 1150
SacI	GAGCTC	1 cut(s)	79
SapI	GCTCTTC	1 cut(s)	279
SaqAI	TTAA	4 cut(s)	576, 813, 869, 1139
Sau3AI	GATC	4 cut(s)	126, 280, 352, 976
Sau96I	GGNCC	6 cut(s)	701, 874, 928, 929, 1000, 1277
SchI	GAGTC	3 cut(s)	315, 1067, 1128
ScrFI	CCNGG	4 cut(s)	82, 705, 837, 838
SduI	GDGCHC	2 cut(s)	79, 932
SfaNI	GCATC	1 cut(s)	739
SfcI	CTRYAG	4 cut(s)	159, 207, 402, 993
SinI	GGWCC	1 cut(s)	874
SmaI	CCCGGG	1 cut(s)	838
SmlI	CTYRAG	1 cut(s)	1099
SmoI	CTYRAG	1 cut(s)	1099
SnaBI	TACGTA	1 cut(s)	845
SphI	GCATGC	1 cut(s)	60
Sse9I	AATT	6 cut(s)	23, 69, 361, 588, 951, 1307
SseBI	AGGCCT	1 cut(s)	369
SsiI	CCGC	4 cut(s)	5, 315, 607, 1203
SspMI	CTAG	3 cut(s)	336, 371, 410
SstI	GAGCTC	1 cut(s)	79
StuI	AGGCCT	1 cut(s)	369
StyD4I	CCNGG	4 cut(s)	80, 703, 835, 836
StyI	CCWWGG	2 cut(s)	168, 335
TaaI	ACNGT	3 cut(s)	208, 1045, 1345
TaiI	ACGT	2 cut(s)	325, 847
TaqI	TCGA	3 cut(s)	565, 981, 1219
TaqII	GACCGA	1 cut(s)	1328
TasI	AATT	6 cut(s)	23, 69, 361, 588, 951, 1307
TatI	WGTACW	1 cut(s)	766
TauI	GCSGC	3 cut(s)	8, 317, 1206
TfiI	GAWTC	6 cut(s)	118, 259, 331, 615, 721, 1171
Tru1I	TTAA	4 cut(s)	576, 813, 869, 1139
Tru9I	TTAA	4 cut(s)	576, 813, 869, 1139
TscAI	CASTG	3 cut(s)	211, 1002, 1083
TseFI	GTSAC	1 cut(s)	542
TseI	GCWGC	7 cut(s)	98, 161, 317, 413, 752, 896, 992
Tsp45I	GTSAC	1 cut(s)	542
TspDTI	ATGAA	6 cut(s)	228, 657, 690, 767, 810, 921
TspGWI	ACGGA	2 cut(s)	252, 1035
TspMI	CCCGGG	1 cut(s)	836
TspRI	CASTG	3 cut(s)	211, 1002, 1083
VpaK11BI	GGWCC	1 cut(s)	874
VspI	ATTAAT	1 cut(s)	813
XagI	CCTNNNNNAGG	2 cut(s)	363, 1179
XceI	RCATGY	1 cut(s)	60
XcmI	CCANNNNNNNNNTGG	1 cut(s)	172
XmaI	CCCGGG	1 cut(s)	836
XmaJI	CCTAGG	1 cut(s)	335
XmnI	GAANNNNTTC	1 cut(s)	263
XspI	CTAG	3 cut(s)	336, 371, 410

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.