Splicing factor U2af small subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G27650 AT1G27650 |
| fragaria_vesca | FvH4_3g29970 FvH4_3g29970 FvH4_3g29970 FvH4_3g29970 |
| malus_domestica | MD03G1134200.v1.1 MD11G1156400.v1.1 |
| prunus_persica | Prupe.6G118600_v2.0.a1 Prupe.6G118600_v2.0.a1 |
| pyrus_communis | pycom03g09020 pycom11g12700 |
| rosa_chinensis | RchiOBHm_Chr5g0055381 RchiOBHm_Chr5g0055431 |
| rosa_laevigata | RLG00000034985 |
| rosa_multiflora | Rmu_sc0001673.1_g000027 Rmu_sc0014407.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00024920 Rroxscaffold_1G00024960 |
| rosa_samantha | Rh5AG362400 Rh5BG374600 Rh5CG396200 Rh5CG396400 Rh5DG387700 |
| rosa_wichuraiana | Rw5G034090 Rw5G034120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 106 |
| AclWI | GGATC | 1 cut(s) | 39 |
| AcsI | RAATTY | 1 cut(s) | 20 |
| AcyI | GRCGYC | 1 cut(s) | 190 |
| AdeI | CACNNNGTG | 1 cut(s) | 106 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 16, 106, 243 |
| AgsI | TTSAA | 2 cut(s) | 41, 68 |
| AluBI | AGCT | 2 cut(s) | 46, 95 |
| AluI | AGCT | 2 cut(s) | 46, 95 |
| AlwI | GGATC | 1 cut(s) | 39 |
| ApeKI | GCWGC | 1 cut(s) | 146 |
| ApoI | RAATTY | 1 cut(s) | 20 |
| AsuHPI | GGTGA | 1 cut(s) | 229 |
| BbvI | GCAGC | 1 cut(s) | 133 |
| BciVI | GTATCC | 2 cut(s) | 272, 279 |
| BfaI | CTAG | 1 cut(s) | 92 |
| BfuI | GTATCC | 2 cut(s) | 272, 279 |
| BisI | GCNGC | 1 cut(s) | 147 |
| BlsI | GCNGC | 1 cut(s) | 148 |
| BmsI | GCATC | 1 cut(s) | 311 |
| BpuEI | CTTGAG | 1 cut(s) | 143 |
| BsaAI | YACGTR | 1 cut(s) | 264 |
| BsaHI | GRCGYC | 1 cut(s) | 190 |
| BsaWI | WCCGGW | 1 cut(s) | 214 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 16, 106, 243 |
| Bse1I | ACTGG | 2 cut(s) | 175, 287 |
| Bse3DI | GCAATG | 1 cut(s) | 118 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 16, 106, 243 |
| BseMI | GCAATG | 1 cut(s) | 118 |
| BseMII | CTCAG | 1 cut(s) | 38 |
| BseNI | ACTGG | 2 cut(s) | 175, 287 |
| BseXI | GCAGC | 1 cut(s) | 133 |
| BseYI | CCCAGC | 1 cut(s) | 185 |
| BsiSI | CCGG | 1 cut(s) | 215 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 16, 106, 243 |
| Bsp143I | GATC | 1 cut(s) | 31 |
| BspCNI | CTCAG | 1 cut(s) | 39 |
| BspPI | GGATC | 1 cut(s) | 39 |
| BsrDI | GCAATG | 1 cut(s) | 118 |
| BsrI | ACTGG | 2 cut(s) | 175, 287 |
| BssMI | GATC | 1 cut(s) | 31 |
| BssNI | GRCGYC | 1 cut(s) | 190 |
| BstACI | GRCGYC | 1 cut(s) | 190 |
| BstBAI | YACGTR | 1 cut(s) | 264 |
| BstC8I | GCNNGC | 1 cut(s) | 245 |
| BstDEI | CTNAG | 1 cut(s) | 47 |
| BstKTI | GATC | 1 cut(s) | 34 |
| BstMBI | GATC | 1 cut(s) | 31 |
| BstNSI | RCATGY | 2 cut(s) | 146, 243 |
| BstV1I | GCAGC | 1 cut(s) | 133 |
| BstX2I | RGATCY | 1 cut(s) | 31 |
| BstYI | RGATCY | 1 cut(s) | 31 |
| BsuI | GTATCC | 2 cut(s) | 272, 279 |
| Cac8I | GCNNGC | 1 cut(s) | 245 |
| CseI | GACGC | 1 cut(s) | 179 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 256, 291 |
| CviAII | CATG | 3 cut(s) | 103, 143, 240 |
| CviJI | RGCY | 5 cut(s) | 46, 72, 95, 207, 236 |
| CviKI_1 | RGCY | 5 cut(s) | 46, 72, 95, 207, 236 |
| DdeI | CTNAG | 1 cut(s) | 47 |
| DpnI | GATC | 1 cut(s) | 33 |
| DpnII | GATC | 1 cut(s) | 31 |
| DraIII | CACNNNGTG | 1 cut(s) | 106 |
| EcoT22I | ATGCAT | 1 cut(s) | 304 |
| FaeI | CATG | 3 cut(s) | 106, 146, 243 |
| FaiI | YATR | 9 cut(s) | 27, 57, 104, 120, 144, 183, 241, 252, 300 |
| FatI | CATG | 3 cut(s) | 102, 142, 239 |
| Fnu4HI | GCNGC | 1 cut(s) | 147 |
| Fsp4HI | GCNGC | 1 cut(s) | 147 |
| FspBI | CTAG | 1 cut(s) | 92 |
| GluI | GCNGC | 1 cut(s) | 147 |
| GsaI | CCCAGC | 1 cut(s) | 189 |
| HapII | CCGG | 1 cut(s) | 215 |
| HgaI | GACGC | 1 cut(s) | 179 |
| Hin1I | GRCGYC | 1 cut(s) | 190 |
| Hin1II | CATG | 3 cut(s) | 106, 146, 243 |
| HinfI | GANTC | 1 cut(s) | 163 |
| HpaII | CCGG | 1 cut(s) | 215 |
| HphI | GGTGA | 1 cut(s) | 229 |
| Hpy188I | TCNGA | 2 cut(s) | 168, 307 |
| Hpy188III | TCNNGA | 2 cut(s) | 41, 160 |
| HpyCH4IV | ACGT | 1 cut(s) | 263 |
| HpyCH4V | TGCA | 6 cut(s) | 4, 149, 243, 267, 292, 302 |
| HpyF3I | CTNAG | 1 cut(s) | 47 |
| HpySE526I | ACGT | 1 cut(s) | 263 |
| Hsp92I | GRCGYC | 1 cut(s) | 190 |
| Hsp92II | CATG | 3 cut(s) | 106, 146, 243 |
| Kzo9I | GATC | 1 cut(s) | 31 |
| LpnPI | CCDG | 7 cut(s) | 86, 115, 156, 171, 228, 229, 268 |
| Lsp1109I | GCAGC | 1 cut(s) | 133 |
| LweI | GCATC | 1 cut(s) | 311 |
| MaeI | CTAG | 1 cut(s) | 92 |
| MaeII | ACGT | 1 cut(s) | 263 |
| MaeIII | GTNAC | 1 cut(s) | 217 |
| MalI | GATC | 1 cut(s) | 33 |
| MboI | GATC | 1 cut(s) | 31 |
| MboII | GAAGA | 1 cut(s) | 186 |
| MflI | RGATCY | 1 cut(s) | 31 |
| MluCI | AATT | 4 cut(s) | 20, 63, 293, 324 |
| MnlI | CCTC | 6 cut(s) | 10, 22, 127, 247, 313, 322 |
| Mph1103I | ATGCAT | 1 cut(s) | 304 |
| MspI | CCGG | 1 cut(s) | 215 |
| NdeII | GATC | 1 cut(s) | 31 |
| NlaIII | CATG | 3 cut(s) | 106, 146, 243 |
| NmuCI | GTSAC | 1 cut(s) | 217 |
| NsiI | ATGCAT | 1 cut(s) | 304 |
| NspI | RCATGY | 2 cut(s) | 146, 243 |
| PfeI | GAWTC | 1 cut(s) | 163 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 106 |
| PkrI | GCNGC | 1 cut(s) | 148 |
| Ppu21I | YACGTR | 1 cut(s) | 264 |
| PspFI | CCCAGC | 1 cut(s) | 185 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 110, 142 |
| PsuI | RGATCY | 1 cut(s) | 31 |
| SatI | GCNGC | 1 cut(s) | 147 |
| Sau3AI | GATC | 1 cut(s) | 31 |
| SetI | ASST | 4 cut(s) | 48, 93, 97, 266 |
| SfaNI | GCATC | 1 cut(s) | 311 |
| SmlI | CTYRAG | 1 cut(s) | 158 |
| SmoI | CTYRAG | 1 cut(s) | 158 |
| Sse9I | AATT | 4 cut(s) | 20, 63, 293, 324 |
| SspMI | CTAG | 1 cut(s) | 92 |
| TaiI | ACGT | 1 cut(s) | 266 |
| TaqI | TCGA | 1 cut(s) | 15 |
| TasI | AATT | 4 cut(s) | 20, 63, 293, 324 |
| TfiI | GAWTC | 1 cut(s) | 163 |
| TseFI | GTSAC | 1 cut(s) | 217 |
| TseI | GCWGC | 1 cut(s) | 146 |
| Tsp45I | GTSAC | 1 cut(s) | 217 |
| TspGWI | ACGGA | 1 cut(s) | 218 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 106 |
| XapI | RAATTY | 1 cut(s) | 20 |
| XceI | RCATGY | 2 cut(s) | 146, 243 |
| XspI | CTAG | 1 cut(s) | 92 |
| Zsp2I | ATGCAT | 1 cut(s) | 304 |