Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0011549

Physical Location & Seq

Genomic Coordinates Forward (+)

79415235 .. 79422625

Gene Structure 7391 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ34826

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGATCCCTTCAGCTTTTGAGATTGGCCGAGCACGAACCTCTCGTTTTTTTCCTGTATTTCACACTTCAACTCATTCACTCACTCTCACTCACAGTCGCCGCATAAATCCGACTCCGGAGAAACTTCCCCGTCAAAGCAAAACGATGTCGTATGTGCCTCCTCACCTGAGAAACTCAACCTCAACCACCACCACCACCACTACCACCGCCACCACCAGAACCTCCTCCGGAACCGACGCTGATCGGAGCAAGCTCTCTTACTCCTCCTCCAACTTTCACTCCAACAACAACGACAAGTCGTCCGCTGCTTCATTCTCCTCGTTCTCGCACTCCAATGGCTCCCGGTGGAGTTCCGCCGCTCACTCGCCGGCCAACCGAGCTATCTCCCCGCCCGACGCCGTCGTCCCTCAGTGGAAGCCGTCGGAACGGGTCCTCCGAATGAAGCCGGAACTGATTGAGGAGGTGTGTTTGCGGCTTAATTTGGATGTTTCTGTTAGTCCAGACTCTGCTCCTCCCCCGGCACCAATTGAGTCTTTTACAGATATGTGTTTGCACCCTAGCATTATGAAGGATATAGCATTTCATGGATACACTATGCCAACACCAATTCAAGCTCAAGCCATGCCAGTTGCCCTCAGTGGAAGGGATTTATTAGGTTGCGCTGAAACTGGTAGTGGTAAAACAGCTGCATTTGCCATTCCTATGATACAGCATTGTTTGGCTCAACCTCCCGTTCAGCGTGGTGATGGACCACTAGCATTGGTACTGGCCCCAACTAGAGAGCTTGCACAACAAATAGAGGAAGAGGTCAAGGCTTTTAGTAAATCTCTCGAGTCCTTCAAAACTGCAATAGTTGTGGGTGGGACCAACATAGCTGAGCAGAGATCTGAGCTTCGAGCAGGAGTTAATATTGTGGTTGCTACTCCTGGAAGATTCATAGATCATTTACAGCAAGGGAACACTTCTGTGTCTAGAATTTCGTTTGTTGTTCTAGATGAAGCTGATAGAATGCTTGACATGGGTTTTGAACCACAGATAAGAGAGGTGATGCGGAACCTTTCTGAAAAGCATCAAACTTTGCTGTTTAGTGCAACTATGCCTGAAGAGATTGAAGGGTTAGCCCAGGAATATTTGACTAATCCAGTGCAAGTGAAGGTGGGAAAAGTGAGTAGCCCTACAGCAAATGTAACTCAGAGTTTGGAGAAGGTTCCTGACAGTGAGAAGACTGATCGGCTTCTGGGTTTGCTCGTAGAGGAGTCATCTCGAGCTGAAAGAGCTGGACATCCATTTCCCTTAACTATTGTATTTGTTGAAAGGAAGACACGCTGTGATGATGTAGCTGAAGCTTTGGTAGCACAAGGTTTGCATGCAGTTGCTCTTCATGGTGGACGTACTCAAACTGAAAGAGAGGCTGCTCTGCGTGAATTTAGAAAAGGCACTACCAACATCTTGGTTGCCACCGATGTTGCATCTCGTGGTTTGGACGTCTCAGGAGTTGCTCACGTTATCAATTTGGATCTTCCGAAGAGCATGGAAGATTATGTACACCGGATTGGAAGGACTGGAAGAGCGGGATCAATGGGACAAGCTACTTCCTTCTACACTGATCGTGATATGTTCCTTGTGGCGAATATAAAGAAAGCAATAGCTGATGTGGGATCTGGGAATGCTCTAGCTTTTGCTACGGGGAAGACTGCAAGAAGGAAAGAAAGAGAAGCAGCTGCTGCTCACAAGCAAGCTAGGGTTTCTCTATCCAAGTCTTCAAGTATGGGGCCCACATCAATAAACATTGAGGACAAGTATAAGTTCATGGTTTCTGAACCGGACAATCAAACAGAGGGTGCAGCAGATAGTGCTTGGGACGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03040 ko05202 ko05205 map03040 map05202 map05205

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

622

Amino Acids

67.53

Weight (kDa)

7.32

Isoelectric Point (pI)

48.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	201 - 371	4.2e-53	DEAD/DEAH box helicase
ResIII	PF04851	221 - 367	6.8e-09	Type III restriction enzyme, res subunit
Helicase_C	PF00271	431 - 525	8.8e-30	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011549)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g40600 FvH4_3g40620
malus_domestica	MD03G1050800.v1.1 MD11G1052800.v1.1
prunus_persica	Prupe.6G040300_v2.0.a1 Prupe.6G040300_v2.0.a1
pyrus_communis	pycom03g04010 pycom11g04300
rosa_chinensis	RchiOBHm_Chr5g0073371
rosa_laevigata	RLG00000036381
rosa_multiflora	Rmu_sc0024948.1_g000001
rosa_roxburghii	Rroxscaffold_1G00007870
rosa_rugosa	Rorug05G0423000 Rorug05G0423100 Rorug05G0423200
rosa_samantha	Rh5AG479600 Rh5BG500800 Rh5CG523900 Rh5DG512700
rosa_wichuraiana	Rw5G044590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	401
AatII	GACGTC	1 cut(s)	1488
AccB1I	GGYRCC	1 cut(s)	520
AccBSI	CCGCTC	2 cut(s)	359, 1571
AccIII	TCCGGA	2 cut(s)	115, 227
AciI	CCGC	9 cut(s)	100, 207, 303, 354, 357, 389, 472, 1051, 1571
AclWI	GGATC	3 cut(s)	1524, 1582, 1666
AcoI	YGGCCR	2 cut(s)	25, 369
AcsI	RAATTY	2 cut(s)	975, 1424
AcuI	CTGAAG	2 cut(s)	1122, 1362
AcyI	GRCGYC	2 cut(s)	396, 1485
AdeI	CACNNNGTG	1 cut(s)	1328
AfaI	GTAC	3 cut(s)	765, 1393, 1545
AgsI	TTSAA	7 cut(s)	69, 611, 841, 1028, 1112, 1313, 1764
AhdI	GACNNNNNGTC	1 cut(s)	298
AjnI	CCWGG	2 cut(s)	925, 1122
AleI	CACNNNNGTG	1 cut(s)	965
AloI	GAACNNNNNNTCC	2 cut(s)	417, 449
Alw21I	GWGCWC	1 cut(s)	34
Alw26I	GTCTC	1 cut(s)	1492
AlwI	GGATC	3 cut(s)	1524, 1582, 1666
AlwNI	CAGNNNCTG	2 cut(s)	506, 1724
Ama87I	CYCGRG	2 cut(s)	830, 1263
Aor13HI	TCCGGA	2 cut(s)	115, 227
AoxI	GGCC	4 cut(s)	25, 369, 768, 1772
ApaI	GGGCCC	1 cut(s)	1776
ApeKI	GCWGC	7 cut(s)	305, 686, 1412, 1718, 1721, 1724, 1844
ApoI	RAATTY	2 cut(s)	975, 1424
ArsI	GACNNNNNNTTYG	2 cut(s)	1007, 1039
AspLEI	GCGC	1 cut(s)	662
AspS9I	GGNCC	6 cut(s)	430, 749, 769, 864, 1772, 1773
AsuC2I	CCSGG	2 cut(s)	343, 518
AsuHPI	GGTGA	3 cut(s)	155, 755, 1057
AvaI	CYCGRG	2 cut(s)	830, 1263
AvaII	GGWCC	3 cut(s)	430, 749, 864
BaeGI	GKGCMC	1 cut(s)	1776
BanI	GGYRCC	1 cut(s)	520
BanII	GRGCYC	1 cut(s)	1776
BarI	GAAGNNNNNNTAC	2 cut(s)	1527, 1559
BauI	CACGAG	1 cut(s)	1473
BbsI	GAAGAC	4 cut(s)	1229, 1325, 1697, 1752
Bbv12I	GWGCWC	1 cut(s)	34
BbvI	GCAGC	7 cut(s)	292, 673, 1399, 1708, 1711, 1730, 1856
BccI	CCATC	1 cut(s)	740
BceAI	ACGGC	2 cut(s)	383, 403
BciT130I	CCWGG	2 cut(s)	927, 1124
BciVI	GTATCC	1 cut(s)	581
BcnI	CCSGG	2 cut(s)	343, 518
BcoDI	GTCTC	1 cut(s)	1492
BfaI	CTAG	7 cut(s)	558, 755, 777, 972, 992, 1673, 1740
BfmI	CTRYAG	1 cut(s)	1176
BfuI	GTATCC	1 cut(s)	581
BglII	AGATCT	1 cut(s)	884
BlpI	GCTNAGC	1 cut(s)	876
Bme1390I	CCNGG	4 cut(s)	343, 518, 927, 1124
Bme18I	GGWCC	3 cut(s)	430, 749, 864
BmeRI	GACNNNNNGTC	1 cut(s)	298
BmeT110I	CYCGRG	2 cut(s)	830, 1263
BmgT120I	GGNCC	6 cut(s)	430, 749, 769, 864, 1772, 1773
BmrFI	CCNGG	4 cut(s)	343, 518, 927, 1124
BmsI	GCATC	3 cut(s)	1038, 1078, 1478
BpiI	GAAGAC	4 cut(s)	1229, 1325, 1697, 1752
Bpu1102I	GCTNAGC	1 cut(s)	876
BpuEI	CTTGAG	1 cut(s)	600
BpuMI	CCSGG	2 cut(s)	343, 518
BsaHI	GRCGYC	2 cut(s)	396, 1485
BsaJI	CCNNGG	2 cut(s)	516, 1122
BsaWI	WCCGGW	4 cut(s)	115, 227, 1548, 1822
BsaXI	ACNNNNNCTCC	6 cut(s)	251, 263, 281, 293, 417, 447
Bse118I	RCCGGY	1 cut(s)	367
Bse1I	ACTGG	5 cut(s)	626, 673, 771, 1142, 1567
BseAI	TCCGGA	2 cut(s)	115, 227
BseBI	CCWGG	2 cut(s)	927, 1124
BseDI	CCNNGG	2 cut(s)	516, 1122
BseGI	GGATG	2 cut(s)	490, 1282
BseMII	CTCAG	7 cut(s)	158, 422, 649, 867, 879, 1205, 1503
BseNI	ACTGG	5 cut(s)	626, 673, 771, 1142, 1567
BseRI	GAGGAG	8 cut(s)	150, 214, 253, 256, 307, 473, 501, 1268
BseSI	GKGCMC	1 cut(s)	1776
BseXI	GCAGC	7 cut(s)	292, 673, 1399, 1708, 1711, 1730, 1856
BsgI	GTGCAG	1 cut(s)	1863
BshFI	GGCC	4 cut(s)	27, 371, 770, 1774
BshNI	GGYRCC	1 cut(s)	520
BsiHKAI	GWGCWC	1 cut(s)	34
BsiHKCI	CYCGRG	2 cut(s)	830, 1263
BsiSI	CCGG	8 cut(s)	116, 228, 343, 368, 446, 518, 1549, 1823
BslFI	GGGAC	3 cut(s)	389, 877, 1596
BsmAI	GTCTC	1 cut(s)	1492
BsmBI	CGTCTC	1 cut(s)	1492
BsmFI	GGGAC	3 cut(s)	389, 877, 1596
BsmI	GAATGC	2 cut(s)	1014, 1672
BsnI	GGCC	4 cut(s)	27, 371, 770, 1774
BsoBI	CYCGRG	2 cut(s)	830, 1263
Bsp120I	GGGCCC	1 cut(s)	1772
Bsp1286I	GDGCHC	2 cut(s)	34, 1776
Bsp13I	TCCGGA	2 cut(s)	115, 227
Bsp1407I	TGTACA	1 cut(s)	1543
Bsp143I	GATC	9 cut(s)	3, 241, 884, 940, 1228, 1516, 1574, 1606, 1658
Bsp1720I	GCTNAGC	1 cut(s)	876
BspACI	CCGC	9 cut(s)	100, 207, 303, 354, 357, 389, 472, 1051, 1571
BspANI	GGCC	4 cut(s)	27, 371, 770, 1774
BspCNI	CTCAG	7 cut(s)	159, 421, 648, 868, 880, 1204, 1502
BspEI	TCCGGA	2 cut(s)	115, 227
BspPI	GGATC	3 cut(s)	1524, 1582, 1666
BspQI	GCTCTTC	3 cut(s)	1383, 1520, 1561
BspT107I	GGYRCC	1 cut(s)	520
BsrBI	CCGCTC	2 cut(s)	359, 1571
BsrFI	RCCGGY	1 cut(s)	367
BsrGI	TGTACA	1 cut(s)	1543
BsrI	ACTGG	5 cut(s)	626, 673, 771, 1142, 1567
BssAI	RCCGGY	1 cut(s)	367
BssECI	CCNNGG	2 cut(s)	516, 1122
BssMI	GATC	9 cut(s)	3, 241, 884, 940, 1228, 1516, 1574, 1606, 1658
BssNI	GRCGYC	2 cut(s)	396, 1485
BssSI	CACGAG	1 cut(s)	1473
Bst2BI	CACGAG	1 cut(s)	1473
Bst2UI	CCWGG	2 cut(s)	927, 1124
Bst4CI	ACNGT	2 cut(s)	95, 1217
Bst6I	CTCTTC	5 cut(s)	798, 1098, 1383, 1520, 1561
BstACI	GRCGYC	2 cut(s)	396, 1485
BstAPI	GCANNNNNTGC	2 cut(s)	1724, 1853
BstAUI	TGTACA	1 cut(s)	1543
BstC8I	GCNNGC	5 cut(s)	251, 369, 786, 1368, 1737
BstDEI	CTNAG	7 cut(s)	167, 408, 635, 876, 888, 1191, 1489
BstF5I	GGATG	2 cut(s)	490, 1282
BstHHI	GCGC	1 cut(s)	662
BstKTI	GATC	9 cut(s)	6, 244, 887, 943, 1231, 1519, 1577, 1609, 1661
BstMAI	GTCTC	1 cut(s)	1492
BstMBI	GATC	9 cut(s)	3, 241, 884, 940, 1228, 1516, 1574, 1606, 1658
BstMWI	GCNNNNNNNGC	6 cut(s)	377, 692, 1274, 1352, 1724, 1853
BstNI	CCWGG	2 cut(s)	927, 1124
BstNSI	RCATGY	1 cut(s)	1370
BstSCI	CCNGG	4 cut(s)	341, 516, 925, 1122
BstSFI	CTRYAG	1 cut(s)	1176
BstSLI	GKGCMC	1 cut(s)	1776
BstV1I	GCAGC	7 cut(s)	292, 673, 1399, 1708, 1711, 1730, 1856
BstV2I	GAAGAC	4 cut(s)	1229, 1325, 1697, 1752
BstX2I	RGATCY	3 cut(s)	884, 1516, 1658
BstXI	CCANNNNNNTGG	1 cut(s)	1450
BstYI	RGATCY	3 cut(s)	884, 1516, 1658
BsuI	GTATCC	1 cut(s)	581
BsuRI	GGCC	4 cut(s)	27, 371, 770, 1774
BtsCI	GGATG	2 cut(s)	490, 1282
BtsIMutI	CAGTG	5 cut(s)	416, 643, 1149, 1222, 1602
Cac8I	GCNNGC	5 cut(s)	251, 369, 786, 1368, 1737
CaiI	CAGNNNCTG	2 cut(s)	506, 1724
CfoI	GCGC	1 cut(s)	662
Cfr10I	RCCGGY	1 cut(s)	367
Cfr13I	GGNCC	6 cut(s)	430, 749, 769, 864, 1772, 1773
CseI	GACGC	2 cut(s)	245, 404
Csp6I	GTAC	3 cut(s)	764, 1392, 1544
CspCI	CAANNNNNGTGG	6 cut(s)	741, 776, 837, 872, 1447, 1482
CviAII	CATG	7 cut(s)	584, 622, 1018, 1367, 1382, 1531, 1810
CviQI	GTAC	3 cut(s)	764, 1392, 1544
DdeI	CTNAG	7 cut(s)	167, 408, 635, 876, 888, 1191, 1489
DpnI	GATC	9 cut(s)	5, 243, 886, 942, 1230, 1518, 1576, 1608, 1660
DpnII	GATC	9 cut(s)	3, 241, 884, 940, 1228, 1516, 1574, 1606, 1658
DraIII	CACNNNGTG	1 cut(s)	1328
DrdI	GACNNNNNNGTC	1 cut(s)	401
DriI	GACNNNNNGTC	1 cut(s)	298
DseDI	GACNNNNNNGTC	1 cut(s)	401
EaeI	YGGCCR	2 cut(s)	25, 369
Eam1104I	CTCTTC	5 cut(s)	798, 1098, 1383, 1520, 1561
Eam1105I	GACNNNNNGTC	1 cut(s)	298
EarI	CTCTTC	5 cut(s)	798, 1098, 1383, 1520, 1561
EciI	GGCGGA	1 cut(s)	343
Eco24I	GRGCYC	1 cut(s)	1776
Eco47I	GGWCC	3 cut(s)	430, 749, 864
Eco57I	CTGAAG	2 cut(s)	1122, 1362
Eco88I	CYCGRG	2 cut(s)	830, 1263
EcoO109I	RGGNCCY	2 cut(s)	430, 1772
EcoRII	CCWGG	2 cut(s)	925, 1122
EcoT38I	GRGCYC	1 cut(s)	1776
Esp3I	CGTCTC	1 cut(s)	1492
FaeI	CATG	7 cut(s)	587, 625, 1021, 1370, 1385, 1534, 1813
FaqI	GGGAC	3 cut(s)	389, 877, 1596
FatI	CATG	7 cut(s)	583, 621, 1017, 1366, 1381, 1530, 1809
FauI	CCCGC	2 cut(s)	396, 1564
FokI	GGATG	2 cut(s)	497, 1269
FriOI	GRGCYC	1 cut(s)	1776
FspBI	CTAG	7 cut(s)	558, 755, 777, 972, 992, 1673, 1740
GlaI	GCGC	1 cut(s)	661
HaeIII	GGCC	4 cut(s)	27, 371, 770, 1774
HapII	CCGG	8 cut(s)	116, 228, 343, 368, 446, 518, 1549, 1823
HgaI	GACGC	2 cut(s)	245, 404
HhaI	GCGC	1 cut(s)	662
Hin1I	GRCGYC	2 cut(s)	396, 1485
Hin1II	CATG	7 cut(s)	587, 625, 1021, 1370, 1385, 1534, 1813
Hin6I	GCGC	1 cut(s)	660
HinP1I	GCGC	1 cut(s)	660
HindIII	AAGCTT	1 cut(s)	1344
HinfI	GANTC	6 cut(s)	112, 503, 530, 833, 933, 1256
HpaII	CCGG	8 cut(s)	116, 228, 343, 368, 446, 518, 1549, 1823
HphI	GGTGA	3 cut(s)	155, 755, 1057
Hpy166II	GTNNAC	2 cut(s)	1388, 1546
Hpy188I	TCNGA	9 cut(s)	111, 246, 424, 437, 889, 1063, 1194, 1524, 1819
Hpy8I	GTNNAC	2 cut(s)	1388, 1546
Hpy99I	CGWCG	4 cut(s)	239, 398, 404, 424
HpyCH4III	ACNGT	2 cut(s)	95, 1217
HpyCH4IV	ACGT	3 cut(s)	1390, 1485, 1503
HpyF10VI	GCNNNNNNNGC	6 cut(s)	377, 692, 1274, 1352, 1724, 1853
HpyF3I	CTNAG	7 cut(s)	167, 408, 635, 876, 888, 1191, 1489
HpySE526I	ACGT	3 cut(s)	1390, 1485, 1503
Hsp92I	GRCGYC	2 cut(s)	396, 1485
Hsp92II	CATG	7 cut(s)	587, 625, 1021, 1370, 1385, 1534, 1813
HspAI	GCGC	1 cut(s)	660
Kpn2I	TCCGGA	2 cut(s)	115, 227
KroI	GCCGGC	1 cut(s)	367
KroNI	GCCGGC	1 cut(s)	369
Kzo9I	GATC	9 cut(s)	3, 241, 884, 940, 1228, 1516, 1574, 1606, 1658
LguI	GCTCTTC	3 cut(s)	1383, 1520, 1561
LmnI	GCTCC	3 cut(s)	246, 344, 514
Lsp1109I	GCAGC	7 cut(s)	292, 673, 1399, 1708, 1711, 1730, 1856
LweI	GCATC	3 cut(s)	1038, 1078, 1478
MaeI	CTAG	7 cut(s)	558, 755, 777, 972, 992, 1673, 1740
MaeII	ACGT	3 cut(s)	1390, 1485, 1503
MaeIII	GTNAC	1 cut(s)	1186
MalI	GATC	9 cut(s)	5, 243, 886, 942, 1230, 1518, 1576, 1608, 1660
MbiI	CCGCTC	2 cut(s)	359, 1571
MboI	GATC	9 cut(s)	3, 241, 884, 940, 1228, 1516, 1574, 1606, 1658
MfeI	CAATTG	1 cut(s)	525
MflI	RGATCY	3 cut(s)	884, 1516, 1658
MhlI	GDGCHC	2 cut(s)	34, 1776
MluCI	AATT	6 cut(s)	478, 525, 606, 975, 1424, 1510
MlyI	GAGTC	5 cut(s)	106, 497, 539, 842, 1265
MmeI	TCCRAC	4 cut(s)	134, 294, 306, 402
MroI	TCCGGA	2 cut(s)	115, 227
MroNI	GCCGGC	1 cut(s)	367
MseI	TTAA	3 cut(s)	477, 906, 1295
MslI	CAYNNNNRTG	3 cut(s)	333, 701, 965
MspA1I	CMGCKG	3 cut(s)	305, 686, 1721
MspI	CCGG	8 cut(s)	116, 228, 343, 368, 446, 518, 1549, 1823
MspR9I	CCNGG	4 cut(s)	343, 518, 927, 1124
MunI	CAATTG	1 cut(s)	525
Mva1269I	GAATGC	2 cut(s)	1014, 1672
MvaI	CCWGG	2 cut(s)	927, 1124
MwoI	GCNNNNNNNGC	6 cut(s)	377, 692, 1274, 1352, 1724, 1853
NaeI	GCCGGC	1 cut(s)	369
NciI	CCSGG	2 cut(s)	343, 518
NdeII	GATC	9 cut(s)	3, 241, 884, 940, 1228, 1516, 1574, 1606, 1658
NgoMIV	GCCGGC	1 cut(s)	367
NlaIII	CATG	7 cut(s)	587, 625, 1021, 1370, 1385, 1534, 1813
NmeAIII	GCCGAG	1 cut(s)	53
NspI	RCATGY	1 cut(s)	1370
OliI	CACNNNNGTG	1 cut(s)	965
PaeI	GCATGC	1 cut(s)	1370
PaeR7I	CTCGAG	2 cut(s)	830, 1263
PciSI	GCTCTTC	3 cut(s)	1383, 1520, 1561
PcsI	WCGNNNNNNNCGW	2 cut(s)	40, 433
PctI	GAATGC	2 cut(s)	1014, 1672
PdiI	GCCGGC	1 cut(s)	369
PfeI	GAWTC	1 cut(s)	933
PflFI	GACNNNGTC	1 cut(s)	398
PfoI	TCCNGGA	1 cut(s)	925
PleI	GAGTC	5 cut(s)	106, 497, 538, 841, 1264
PpsI	GAGTC	5 cut(s)	106, 497, 538, 841, 1264
PpuMI	RGGWCCY	1 cut(s)	430
Psp5II	RGGWCCY	1 cut(s)	430
Psp6I	CCWGG	2 cut(s)	925, 1122
PspGI	CCWGG	2 cut(s)	925, 1122
PspOMI	GGGCCC	1 cut(s)	1772
PspPI	GGNCC	6 cut(s)	430, 749, 769, 864, 1772, 1773
PspPPI	RGGWCCY	1 cut(s)	430
PstNI	CAGNNNCTG	2 cut(s)	506, 1724
PsuI	RGATCY	3 cut(s)	884, 1516, 1658
PsyI	GACNNNGTC	1 cut(s)	398
PvuII	CAGCTG	2 cut(s)	686, 1721
RsaI	GTAC	3 cut(s)	765, 1393, 1545
RsaNI	GTAC	3 cut(s)	764, 1392, 1544
RseI	CAYNNNNRTG	3 cut(s)	333, 701, 965
SapI	GCTCTTC	3 cut(s)	1383, 1520, 1561
SaqAI	TTAA	3 cut(s)	477, 906, 1295
Sau3AI	GATC	9 cut(s)	3, 241, 884, 940, 1228, 1516, 1574, 1606, 1658
Sau96I	GGNCC	6 cut(s)	430, 749, 769, 864, 1772, 1773
SchI	GAGTC	5 cut(s)	106, 497, 539, 842, 1265
ScrFI	CCNGG	4 cut(s)	343, 518, 927, 1124
SduI	GDGCHC	2 cut(s)	34, 1776
SfaNI	GCATC	3 cut(s)	1038, 1078, 1478
SfcI	CTRYAG	1 cut(s)	1176
Sfr274I	CTCGAG	2 cut(s)	830, 1263
SinI	GGWCC	3 cut(s)	430, 749, 864
SlaI	CTCGAG	2 cut(s)	830, 1263
SmiMI	CAYNNNNRTG	3 cut(s)	333, 701, 965
SmlI	CTYRAG	3 cut(s)	615, 830, 1263
SmoI	CTYRAG	3 cut(s)	615, 830, 1263
SphI	GCATGC	1 cut(s)	1370
Sse9I	AATT	6 cut(s)	478, 525, 606, 975, 1424, 1510
SsiI	CCGC	9 cut(s)	100, 207, 303, 354, 357, 389, 472, 1051, 1571
SspI	AATATT	2 cut(s)	910, 1130
SspMI	CTAG	7 cut(s)	558, 755, 777, 972, 992, 1673, 1740
StyD4I	CCNGG	4 cut(s)	341, 516, 925, 1122
TaaI	ACNGT	2 cut(s)	95, 1217
TaiI	ACGT	3 cut(s)	1393, 1488, 1506
TaqI	TCGA	3 cut(s)	831, 895, 1264
TasI	AATT	6 cut(s)	478, 525, 606, 975, 1424, 1510
TatI	WGTACW	1 cut(s)	1543
TauI	GCSGC	3 cut(s)	102, 359, 475
TfiI	GAWTC	1 cut(s)	933
Tru1I	TTAA	3 cut(s)	477, 906, 1295
Tru9I	TTAA	3 cut(s)	477, 906, 1295
TscAI	CASTG	5 cut(s)	416, 643, 1149, 1222, 1609
TseI	GCWGC	7 cut(s)	305, 686, 1412, 1718, 1721, 1724, 1844
TspDTI	ATGAA	8 cut(s)	300, 455, 572, 581, 925, 1011, 1370, 1798
TspRI	CASTG	5 cut(s)	416, 643, 1149, 1222, 1609
Tth111I	GACNNNGTC	1 cut(s)	398
VpaK11BI	GGWCC	3 cut(s)	430, 749, 864
XapI	RAATTY	2 cut(s)	975, 1424
XbaI	TCTAGA	2 cut(s)	971, 991
XceI	RCATGY	1 cut(s)	1370
XhoI	CTCGAG	2 cut(s)	830, 1263
XspI	CTAG	7 cut(s)	558, 755, 777, 972, 992, 1673, 1740
ZraI	GACGTC	1 cut(s)	1486

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.