Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0011549

Physical Location & Seq

Genomic Coordinates Forward (+)

79729845 .. 79738081

Gene Structure 8237 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG500800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1401 bp

ATGTCGTATGTGCCTCCTCACCTGAGAAACTCAACCTCAACCACCACCACCACCACCACCACCACTACCACCGCCACCGCCAGAACCTCCTCCGGAACCGACGCTGATCGGAGCAAGCTCTCTTACTCCTCCTCCAACTCTCACTCCAACAACAACGACAAGTCGTCCGCTGCTTCATTCTCCTCGTTCTCGCACTCCAATGGCTCCCGGTGGAGCTCCGCCGCTCACTCGCCGGCCAACCGAGCTATCTCCCCGCCCGACGCCGTCGTCCCTCAGTGGAAGCCGTCGGAACGGGTCCTCCGAATGAAGCCGGAACTGATTGAGGAGGTGTGTTTGCGGCTTAATTTGGATGTTTCTGTTAGTCCGGACTCTGCTCCTCCCCCGGCACCAATTGAGTCTTTTACAGATATGTGTTTGCACCCTAGCATTATGAAGGATATAGCATTTCATGGATACACTATGCCAACACCAATTCAAGCTCAAGCCATGCCAGTTGCCCTCAGTGGAAGGGATTTATTAGGTTGCGCTGAAACTGGTAGTGGTAAAACAGCTGCATTTGCCATTCCTATGATACAGCATTGTTTGGCTCAACCTCCTGTTCAGCGTGGTGATGGACCACTAGCATTGGTATTGGCCCCAACTAGAGAGCTTGCACAACAAATAGAGGAAGAGGTCAAGGCTTTTAGTAAATCTCTCGAGTCCTTCAAAACTGCAATAGTTGTGGGTGGAACCAACATAGCTGAGCAGAGATCTGAGCTTCGAGCAGGAGTTAATATTGTGGTTGCTACTCCTGGAAGATTCATAGATCATTTACAGCAAGGGAACACTTCTGTGTCTAGAATTTCGTTTGTTGTTCTAGATGAAGCTGACAGAATGCTTGACATGGGTTTTGAACCACAGATAAGAGAGGTGATGCGGAACCTTTCTGAAAAGCATCAAACTTTGCTGTTTAGTGCAACTATGCCTGAAGAGATTGAAGGGTTAGCCCAAGAATATTTGACTAATCCAGTGCAAGTGAAGGTGGGAAAAGTGAGTAGCCCTACAGCAAATGTAACTCAGAGTTTGGAGAAGGTTCCTGACAGTGAGAAGACCGATCGGCTTCTGGGTTTGCTCGTAGAGGAGTCATCTCGAGCTGAAAGAGCTGGACATCCATTTCCCTTAACTATTGTATTTGTTGAAAGGAAGACACGCTGTGATGATGTAGCTGAAGCTTTGGTAGCACAAGGTTTGCATGCAGTTGCTCTTCATGGTGGACGTACTCAAACTGAAAGAGAGGCTGCTCTGCGTGAATTTAGAAAAGGCACTACCAACATCTTGGTTGCCACCGATGTTGCATCTCGTGGTTTGGACGTCTCAGGAGTTGCTCACGTTATCAATTTGGATCTTCCGAAGCAAACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03040 ko05202 ko05205 map03040 map05202 map05205

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

466

Amino Acids

50.27

Weight (kDa)

6.03

Isoelectric Point (pI)

50.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	156 - 326	2.4e-53	DEAD/DEAH box helicase
ResIII	PF04851	176 - 322	3.9e-09	Type III restriction enzyme, res subunit
Helicase_C	PF00271	386 - 464	1.8e-20	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011549)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g40600 FvH4_3g40620
malus_domestica	MD03G1050800.v1.1 MD11G1052800.v1.1
prunus_persica	Prupe.6G040300_v2.0.a1 Prupe.6G040300_v2.0.a1
pyrus_communis	pycom03g04010 pycom11g04300
rosa_chinensis	RchiOBHm_Chr5g0073371
rosa_laevigata	RLG00000036381
rosa_multiflora	Rmu_sc0024948.1_g000001
rosa_roxburghii	Rroxscaffold_1G00007870
rosa_rugosa	Rorug05G0423000 Rorug05G0423100 Rorug05G0423200
rosa_samantha	Rh5AG479600 Rh5BG500800 Rh5CG523900 Rh5DG512700
rosa_wichuraiana	Rw5G044590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	266
AatII	GACGTC	1 cut(s)	1353
AccB1I	GGYRCC	1 cut(s)	385
AccBSI	CCGCTC	1 cut(s)	224
AccIII	TCCGGA	2 cut(s)	92, 364
AciI	CCGC	8 cut(s)	72, 78, 168, 219, 222, 254, 337, 916
AclWI	GGATC	1 cut(s)	1389
AcoI	YGGCCR	1 cut(s)	234
AcsI	RAATTY	2 cut(s)	840, 1289
AcuI	CTGAAG	2 cut(s)	987, 1227
AcyI	GRCGYC	2 cut(s)	261, 1350
AdeI	CACNNNGTG	1 cut(s)	1193
AfaI	GTAC	1 cut(s)	1258
AgsI	TTSAA	5 cut(s)	476, 706, 893, 977, 1178
AhdI	GACNNNNNGTC	1 cut(s)	163
AjnI	CCWGG	1 cut(s)	790
AleI	CACNNNNGTG	1 cut(s)	830
AloI	GAACNNNNNNTCC	2 cut(s)	282, 314
Alw21I	GWGCWC	1 cut(s)	218
Alw26I	GTCTC	1 cut(s)	1357
AlwI	GGATC	1 cut(s)	1389
Ama87I	CYCGRG	2 cut(s)	695, 1128
Aor13HI	TCCGGA	2 cut(s)	92, 364
AoxI	GGCC	2 cut(s)	234, 633
ApeKI	GCWGC	3 cut(s)	170, 551, 1277
ApoI	RAATTY	2 cut(s)	840, 1289
ArsI	GACNNNNNNTTYG	2 cut(s)	872, 904
AspLEI	GCGC	1 cut(s)	527
AspS9I	GGNCC	3 cut(s)	295, 614, 634
AsuC2I	CCSGG	2 cut(s)	208, 383
AsuHPI	GGTGA	3 cut(s)	11, 620, 922
AvaI	CYCGRG	2 cut(s)	695, 1128
AvaII	GGWCC	2 cut(s)	295, 614
BanI	GGYRCC	1 cut(s)	385
BanII	GRGCYC	1 cut(s)	218
BauI	CACGAG	1 cut(s)	1338
BbsI	GAAGAC	2 cut(s)	1094, 1190
Bbv12I	GWGCWC	1 cut(s)	218
BbvI	GCAGC	3 cut(s)	157, 538, 1264
BccI	CCATC	1 cut(s)	605
BceAI	ACGGC	2 cut(s)	248, 268
BciT130I	CCWGG	1 cut(s)	792
BciVI	GTATCC	1 cut(s)	446
BcnI	CCSGG	2 cut(s)	208, 383
BcoDI	GTCTC	1 cut(s)	1357
BfaI	CTAG	5 cut(s)	423, 620, 642, 837, 857
BfmI	CTRYAG	1 cut(s)	1041
BfuI	GTATCC	1 cut(s)	446
BglII	AGATCT	1 cut(s)	749
BisI	GCNGC	5 cut(s)	171, 222, 338, 552, 1278
BlpI	GCTNAGC	1 cut(s)	741
BlsI	GCNGC	5 cut(s)	172, 223, 339, 553, 1279
Bme1390I	CCNGG	3 cut(s)	208, 383, 792
Bme18I	GGWCC	2 cut(s)	295, 614
BmeRI	GACNNNNNGTC	1 cut(s)	163
BmeT110I	CYCGRG	2 cut(s)	695, 1128
BmgT120I	GGNCC	3 cut(s)	295, 614, 634
BmiI	GGNNCC	8 cut(s)	97, 205, 296, 387, 636, 730, 920, 1074
BmrFI	CCNGG	3 cut(s)	208, 383, 792
BmsI	GCATC	3 cut(s)	903, 943, 1343
BpiI	GAAGAC	2 cut(s)	1094, 1190
Bpu1102I	GCTNAGC	1 cut(s)	741
BpuEI	CTTGAG	1 cut(s)	465
BpuMI	CCSGG	2 cut(s)	208, 383
BsaHI	GRCGYC	2 cut(s)	261, 1350
BsaJI	CCNNGG	1 cut(s)	381
BsaWI	WCCGGW	2 cut(s)	92, 364
BsaXI	ACNNNNNCTCC	6 cut(s)	116, 128, 146, 158, 282, 312
Bse118I	RCCGGY	1 cut(s)	232
Bse1I	ACTGG	3 cut(s)	491, 538, 1007
BseAI	TCCGGA	2 cut(s)	92, 364
BseBI	CCWGG	1 cut(s)	792
BseDI	CCNNGG	1 cut(s)	381
BseGI	GGATG	2 cut(s)	355, 1147
BseMII	CTCAG	7 cut(s)	14, 287, 514, 732, 744, 1070, 1368
BseNI	ACTGG	3 cut(s)	491, 538, 1007
BseRI	GAGGAG	8 cut(s)	6, 79, 118, 121, 172, 338, 366, 1133
BseXI	GCAGC	3 cut(s)	157, 538, 1264
Bsh1285I	CGRYCG	1 cut(s)	1096
BshFI	GGCC	2 cut(s)	236, 635
BshNI	GGYRCC	1 cut(s)	385
BsiEI	CGRYCG	1 cut(s)	1096
BsiHKAI	GWGCWC	1 cut(s)	218
BsiHKCI	CYCGRG	2 cut(s)	695, 1128
BsiSI	CCGG	6 cut(s)	93, 208, 233, 311, 365, 383
BslFI	GGGAC	1 cut(s)	254
BsmAI	GTCTC	1 cut(s)	1357
BsmBI	CGTCTC	1 cut(s)	1357
BsmFI	GGGAC	1 cut(s)	254
BsmI	GAATGC	1 cut(s)	879
BsnI	GGCC	2 cut(s)	236, 635
BsoBI	CYCGRG	2 cut(s)	695, 1128
Bsp1286I	GDGCHC	1 cut(s)	218
Bsp13I	TCCGGA	2 cut(s)	92, 364
Bsp143I	GATC	5 cut(s)	106, 749, 805, 1093, 1381
Bsp1720I	GCTNAGC	1 cut(s)	741
BspACI	CCGC	8 cut(s)	72, 78, 168, 219, 222, 254, 337, 916
BspANI	GGCC	2 cut(s)	236, 635
BspCNI	CTCAG	7 cut(s)	15, 286, 513, 733, 745, 1069, 1367
BspEI	TCCGGA	2 cut(s)	92, 364
BspLI	GGNNCC	8 cut(s)	97, 205, 296, 387, 636, 730, 920, 1074
BspPI	GGATC	1 cut(s)	1389
BspQI	GCTCTTC	1 cut(s)	1248
BspT107I	GGYRCC	1 cut(s)	385
BsrBI	CCGCTC	1 cut(s)	224
BsrFI	RCCGGY	1 cut(s)	232
BsrI	ACTGG	3 cut(s)	491, 538, 1007
BssAI	RCCGGY	1 cut(s)	232
BssECI	CCNNGG	1 cut(s)	381
BssMI	GATC	5 cut(s)	106, 749, 805, 1093, 1381
BssNI	GRCGYC	2 cut(s)	261, 1350
BssSI	CACGAG	1 cut(s)	1338
Bst2BI	CACGAG	1 cut(s)	1338
Bst2UI	CCWGG	1 cut(s)	792
Bst4CI	ACNGT	1 cut(s)	1082
Bst6I	CTCTTC	3 cut(s)	663, 963, 1248
BstACI	GRCGYC	2 cut(s)	261, 1350
BstC8I	GCNNGC	4 cut(s)	116, 234, 651, 1233
BstDEI	CTNAG	7 cut(s)	23, 273, 500, 741, 753, 1056, 1354
BstF5I	GGATG	2 cut(s)	355, 1147
BstHHI	GCGC	1 cut(s)	527
BstKTI	GATC	5 cut(s)	109, 752, 808, 1096, 1384
BstMAI	GTCTC	1 cut(s)	1357
BstMBI	GATC	5 cut(s)	106, 749, 805, 1093, 1381
BstMCI	CGRYCG	1 cut(s)	1096
BstMWI	GCNNNNNNNGC	4 cut(s)	242, 557, 1139, 1217
BstNI	CCWGG	1 cut(s)	792
BstNSI	RCATGY	1 cut(s)	1235
BstSCI	CCNGG	3 cut(s)	206, 381, 790
BstSFI	CTRYAG	1 cut(s)	1041
BstV1I	GCAGC	3 cut(s)	157, 538, 1264
BstV2I	GAAGAC	2 cut(s)	1094, 1190
BstX2I	RGATCY	2 cut(s)	749, 1381
BstXI	CCANNNNNNTGG	1 cut(s)	1315
BstYI	RGATCY	2 cut(s)	749, 1381
BsuI	GTATCC	1 cut(s)	446
BsuRI	GGCC	2 cut(s)	236, 635
BtsCI	GGATG	2 cut(s)	355, 1147
BtsIMutI	CAGTG	4 cut(s)	281, 508, 1014, 1087
Cac8I	GCNNGC	4 cut(s)	116, 234, 651, 1233
CfoI	GCGC	1 cut(s)	527
Cfr10I	RCCGGY	1 cut(s)	232
Cfr13I	GGNCC	3 cut(s)	295, 614, 634
CseI	GACGC	2 cut(s)	110, 269
Csp6I	GTAC	1 cut(s)	1257
CspCI	CAANNNNNGTGG	6 cut(s)	606, 641, 702, 737, 1312, 1347
CviAII	CATG	5 cut(s)	449, 487, 883, 1232, 1247
CviQI	GTAC	1 cut(s)	1257
DdeI	CTNAG	7 cut(s)	23, 273, 500, 741, 753, 1056, 1354
DpnI	GATC	5 cut(s)	108, 751, 807, 1095, 1383
DpnII	GATC	5 cut(s)	106, 749, 805, 1093, 1381
DraIII	CACNNNGTG	1 cut(s)	1193
DrdI	GACNNNNNNGTC	1 cut(s)	266
DriI	GACNNNNNGTC	1 cut(s)	163
DseDI	GACNNNNNNGTC	1 cut(s)	266
EaeI	YGGCCR	1 cut(s)	234
Eam1104I	CTCTTC	3 cut(s)	663, 963, 1248
Eam1105I	GACNNNNNGTC	1 cut(s)	163
EarI	CTCTTC	3 cut(s)	663, 963, 1248
EciI	GGCGGA	1 cut(s)	208
Ecl136II	GAGCTC	1 cut(s)	216
Eco24I	GRGCYC	1 cut(s)	218
Eco47I	GGWCC	2 cut(s)	295, 614
Eco53kI	GAGCTC	1 cut(s)	216
Eco57I	CTGAAG	2 cut(s)	987, 1227
Eco88I	CYCGRG	2 cut(s)	695, 1128
EcoICRI	GAGCTC	1 cut(s)	216
EcoO109I	RGGNCCY	1 cut(s)	295
EcoRII	CCWGG	1 cut(s)	790
EcoT38I	GRGCYC	1 cut(s)	218
Esp3I	CGTCTC	1 cut(s)	1357
FaeI	CATG	5 cut(s)	452, 490, 886, 1235, 1250
FaqI	GGGAC	1 cut(s)	254
FatI	CATG	5 cut(s)	448, 486, 882, 1231, 1246
FauI	CCCGC	1 cut(s)	261
Fnu4HI	GCNGC	5 cut(s)	171, 222, 338, 552, 1278
FokI	GGATG	2 cut(s)	362, 1134
FriOI	GRGCYC	1 cut(s)	218
Fsp4HI	GCNGC	5 cut(s)	171, 222, 338, 552, 1278
FspBI	CTAG	5 cut(s)	423, 620, 642, 837, 857
GlaI	GCGC	1 cut(s)	526
GluI	GCNGC	5 cut(s)	171, 222, 338, 552, 1278
HaeIII	GGCC	2 cut(s)	236, 635
HapII	CCGG	6 cut(s)	93, 208, 233, 311, 365, 383
HgaI	GACGC	2 cut(s)	110, 269
HhaI	GCGC	1 cut(s)	527
Hin1I	GRCGYC	2 cut(s)	261, 1350
Hin1II	CATG	5 cut(s)	452, 490, 886, 1235, 1250
Hin6I	GCGC	1 cut(s)	525
HinP1I	GCGC	1 cut(s)	525
HindIII	AAGCTT	1 cut(s)	1209
HinfI	GANTC	5 cut(s)	368, 395, 698, 798, 1121
HpaII	CCGG	6 cut(s)	93, 208, 233, 311, 365, 383
HphI	GGTGA	3 cut(s)	11, 620, 922
Hpy166II	GTNNAC	1 cut(s)	1253
Hpy188I	TCNGA	7 cut(s)	111, 289, 302, 754, 928, 1059, 1389
Hpy188III	TCNNGA	8 cut(s)	93, 365, 695, 837, 857, 1076, 1128, 1356
Hpy8I	GTNNAC	1 cut(s)	1253
Hpy99I	CGWCG	4 cut(s)	104, 263, 269, 289
HpyAV	CCTTC	6 cut(s)	427, 501, 712, 971, 1012, 1063
HpyCH4III	ACNGT	1 cut(s)	1082
HpyCH4IV	ACGT	3 cut(s)	1255, 1350, 1368
HpyCH4V	TGCA	9 cut(s)	418, 554, 653, 713, 956, 1012, 1231, 1235, 1334
HpyF10VI	GCNNNNNNNGC	4 cut(s)	242, 557, 1139, 1217
HpyF3I	CTNAG	7 cut(s)	23, 273, 500, 741, 753, 1056, 1354
HpySE526I	ACGT	3 cut(s)	1255, 1350, 1368
Hsp92I	GRCGYC	2 cut(s)	261, 1350
Hsp92II	CATG	5 cut(s)	452, 490, 886, 1235, 1250
HspAI	GCGC	1 cut(s)	525
Kpn2I	TCCGGA	2 cut(s)	92, 364
KroI	GCCGGC	1 cut(s)	232
KroNI	GCCGGC	1 cut(s)	234
Kzo9I	GATC	5 cut(s)	106, 749, 805, 1093, 1381
LguI	GCTCTTC	1 cut(s)	1248
LmnI	GCTCC	5 cut(s)	111, 209, 213, 221, 379
Lsp1109I	GCAGC	3 cut(s)	157, 538, 1264
LweI	GCATC	3 cut(s)	903, 943, 1343
MaeI	CTAG	5 cut(s)	423, 620, 642, 837, 857
MaeII	ACGT	3 cut(s)	1255, 1350, 1368
MaeIII	GTNAC	1 cut(s)	1051
MalI	GATC	5 cut(s)	108, 751, 807, 1095, 1383
MbiI	CCGCTC	1 cut(s)	224
MboI	GATC	5 cut(s)	106, 749, 805, 1093, 1381
MboII	GAAGA	7 cut(s)	680, 807, 980, 1099, 1195, 1235, 1376
MfeI	CAATTG	1 cut(s)	390
MflI	RGATCY	2 cut(s)	749, 1381
MhlI	GDGCHC	1 cut(s)	218
MluCI	AATT	6 cut(s)	343, 390, 471, 840, 1289, 1375
MlyI	GAGTC	4 cut(s)	362, 404, 707, 1130
MmeI	TCCRAC	3 cut(s)	159, 171, 267
MroI	TCCGGA	2 cut(s)	92, 364
MroNI	GCCGGC	1 cut(s)	232
MseI	TTAA	3 cut(s)	342, 771, 1160
MslI	CAYNNNNRTG	3 cut(s)	198, 566, 830
MspA1I	CMGCKG	2 cut(s)	170, 551
MspI	CCGG	6 cut(s)	93, 208, 233, 311, 365, 383
MspR9I	CCNGG	3 cut(s)	208, 383, 792
MunI	CAATTG	1 cut(s)	390
Mva1269I	GAATGC	1 cut(s)	879
MvaI	CCWGG	1 cut(s)	792
MwoI	GCNNNNNNNGC	4 cut(s)	242, 557, 1139, 1217
NaeI	GCCGGC	1 cut(s)	234
NciI	CCSGG	2 cut(s)	208, 383
NdeII	GATC	5 cut(s)	106, 749, 805, 1093, 1381
NgoMIV	GCCGGC	1 cut(s)	232
NlaIII	CATG	5 cut(s)	452, 490, 886, 1235, 1250
NlaIV	GGNNCC	8 cut(s)	97, 205, 296, 387, 636, 730, 920, 1074
NspI	RCATGY	1 cut(s)	1235
OliI	CACNNNNGTG	1 cut(s)	830
PaeI	GCATGC	1 cut(s)	1235
PaeR7I	CTCGAG	2 cut(s)	695, 1128
PciSI	GCTCTTC	1 cut(s)	1248
PcsI	WCGNNNNNNNCGW	1 cut(s)	298
PctI	GAATGC	1 cut(s)	879
PdiI	GCCGGC	1 cut(s)	234
PfeI	GAWTC	1 cut(s)	798
PflFI	GACNNNGTC	1 cut(s)	263
PfoI	TCCNGGA	1 cut(s)	790
PkrI	GCNGC	5 cut(s)	172, 223, 339, 553, 1279
Ple19I	CGATCG	1 cut(s)	1096
PleI	GAGTC	4 cut(s)	362, 403, 706, 1129
PpsI	GAGTC	4 cut(s)	362, 403, 706, 1129
PpuMI	RGGWCCY	1 cut(s)	295
Psp124BI	GAGCTC	1 cut(s)	218
Psp5II	RGGWCCY	1 cut(s)	295
Psp6I	CCWGG	1 cut(s)	790
PspGI	CCWGG	1 cut(s)	790
PspN4I	GGNNCC	8 cut(s)	97, 205, 296, 387, 636, 730, 920, 1074
PspPI	GGNCC	3 cut(s)	295, 614, 634
PspPPI	RGGWCCY	1 cut(s)	295
PsuI	RGATCY	2 cut(s)	749, 1381
PsyI	GACNNNGTC	1 cut(s)	263
PvuI	CGATCG	1 cut(s)	1096
PvuII	CAGCTG	1 cut(s)	551
RsaI	GTAC	1 cut(s)	1258
RsaNI	GTAC	1 cut(s)	1257
RseI	CAYNNNNRTG	3 cut(s)	198, 566, 830
SacI	GAGCTC	1 cut(s)	218
SapI	GCTCTTC	1 cut(s)	1248
SaqAI	TTAA	3 cut(s)	342, 771, 1160
SatI	GCNGC	5 cut(s)	171, 222, 338, 552, 1278
Sau3AI	GATC	5 cut(s)	106, 749, 805, 1093, 1381
Sau96I	GGNCC	3 cut(s)	295, 614, 634
SchI	GAGTC	4 cut(s)	362, 404, 707, 1130
ScrFI	CCNGG	3 cut(s)	208, 383, 792
SduI	GDGCHC	1 cut(s)	218
SfaNI	GCATC	3 cut(s)	903, 943, 1343
SfcI	CTRYAG	1 cut(s)	1041
Sfr274I	CTCGAG	2 cut(s)	695, 1128
SinI	GGWCC	2 cut(s)	295, 614
SlaI	CTCGAG	2 cut(s)	695, 1128
SmiMI	CAYNNNNRTG	3 cut(s)	198, 566, 830
SmlI	CTYRAG	3 cut(s)	480, 695, 1128
SmoI	CTYRAG	3 cut(s)	480, 695, 1128
SphI	GCATGC	1 cut(s)	1235
Sse9I	AATT	6 cut(s)	343, 390, 471, 840, 1289, 1375
SsiI	CCGC	8 cut(s)	72, 78, 168, 219, 222, 254, 337, 916
SspI	AATATT	2 cut(s)	775, 995
SspMI	CTAG	5 cut(s)	423, 620, 642, 837, 857
SstI	GAGCTC	1 cut(s)	218
StyD4I	CCNGG	3 cut(s)	206, 381, 790
TaaI	ACNGT	1 cut(s)	1082
TaiI	ACGT	3 cut(s)	1258, 1353, 1371
TaqI	TCGA	3 cut(s)	696, 760, 1129
TaqII	GACCGA	1 cut(s)	1106
TasI	AATT	6 cut(s)	343, 390, 471, 840, 1289, 1375
TauI	GCSGC	2 cut(s)	224, 340
TfiI	GAWTC	1 cut(s)	798
Tru1I	TTAA	3 cut(s)	342, 771, 1160
Tru9I	TTAA	3 cut(s)	342, 771, 1160
TscAI	CASTG	4 cut(s)	281, 508, 1014, 1087
TseI	GCWGC	3 cut(s)	170, 551, 1277
TspDTI	ATGAA	7 cut(s)	165, 320, 437, 446, 790, 876, 1235
TspRI	CASTG	4 cut(s)	281, 508, 1014, 1087
Tth111I	GACNNNGTC	1 cut(s)	263
VpaK11BI	GGWCC	2 cut(s)	295, 614
XapI	RAATTY	2 cut(s)	840, 1289
XbaI	TCTAGA	2 cut(s)	836, 856
XceI	RCATGY	1 cut(s)	1235
XhoI	CTCGAG	2 cut(s)	695, 1128
XspI	CTAG	5 cut(s)	423, 620, 642, 837, 857
ZraI	GACGTC	1 cut(s)	1351

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.