Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0011549

Physical Location & Seq

Genomic Coordinates Forward (+)

79934401 .. 79940602

Gene Structure 6202 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG512700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1722 bp

ATGTCGTATGTGCCTCCTCACCTGAGAAACTCAACCTCAACCACCACCACCACTACCACCGCCACCGCCAGAACCTCCTCCGGAACCGACGCTGATCGGAGCAAGCTCTCTTACTCCTCCTCCAACTCTCACTCCAACAACAACGACAAGTCGTCCGCTGCTTCATTCTCCTCGTTCTCGCACTCCAATGGCTCCCGGTGGAGTTCCGCCGCTCACTCGCCGGCCAACCGAGCTATCTCCCCGCCCGACGCCGTCGTCCCTCAGTGGAAGCCGTCGGAACGGGTCCTCCGAATGAAGCCGGAACTGATTGAGGAGGTGTGTTTGCGGCTTAATTTAGATGTTTCTGTTAGTCTGGACTCTGCTCCTCCCCCGGCACCAATTGAGTCTTTTACAGATATGTGTTTGCACCCTAGCATTATGAAGGATATAGCATTTCATGGATACACTATGCCAACACCAATTCAGGCTCAAGCCATGCCAGTTGCCCTCAGTGGAAGGGATTTATTAGGTTGCGCTGAAACTGGTAGTGGTAAAACTGCTGCATTTGCCATTCCTATGATACAGCATTGTTTGGCTCAACCTCCCGTTCAGCGTGGTGATGGACCACTAGCATTGGTACTGGCCCCAACTAGAGAGCTTGCACAACAAATAGAGGAAGAGGTCAAGGCTTTTAGTAAATCTCTTGAGTCCTTCAAAACTGCAATAGTTGTGGGTGGAACCAACATAGCTGAGCAGAGATCTGAGCTTCGAGCAGGAGTTAATATTGTGGTTGCTACTCCTGGAAGATTCATAGATCATTTACAGCAAGGGAACACTTCTGTGTCTAGAATTTCGTTTGTTGTTCTAGATGAAGCTGATAGAATGCTTGACATGGGTTTTGAACCACAGATAAGAGAGGTGATGCGGAACCTTTCTGAAAAGCATCAAACTTTGCTGTTTAGTGCAACTATGCCTGAAGAGATTGAAGGGTTAGCCCAGGAATATTTGACTAATCCAGTGCAAGTGAAGGTGGGAAAAGTGAGTAGCCCTACAGCAAATGTAACTCAGAGTTTGGAGAAGGTTCCTGACAGTGAGAAGACTGATCGGCTTCTGGGTTTGCTCGTAGAGGAGTCATCTCGAGCTGAAAGAGCTGGACATCCATTTCCCTTAACTATTGTATTTGTTGAAAGGAAGACACGCTGTGATGATGTAGCTGAAGCTTTGGTAGCACAAGGTTTGCATGCAGTTGCTCTTCATGGTGGACGTACTCAAACTGAAAGAGAGGCTGCTCTGCGTGAATTTAGAAAAGGCACTACCAACATCTTGGTTGCCACCGATGTTGCATCTCGTGGTTTGGACGTCTCAGGAGTTGCTCACGTTATCAATTTGGATCTTCCGAAGAGCATGGAAGATTATGTACACCGGATTGGAAGGACTGGAAGAGCGGGATCAATGGGACAAGCTACTTCCTTCTACACTGATCGTGATATGTTCCTTGTGGCGAATATAAAGAAAGCAATAGCTGATGTGGGATCTGGGAATGCTCTAGCTTTTGCTACGGGGAAGACTGCAAGAAGGAAAGAAAGAGAAGCAGCTGCTGCTCACAAGCAAGCTAGGGTTTCTCTATCCAAGTCTTCAAGTATGGGGCCCACATCAATAAACATTGAGGACAAGTATAAGTTCATGGTTTCTGAACCGGACAATCAAACAGAGGGTGCAGCAGATAGTGCTTGGGACGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03040 ko05202 ko05205 map03040 map05202 map05205

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

573

Amino Acids

61.84

Weight (kDa)

6.24

Isoelectric Point (pI)

47.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	152 - 322	3.6e-53	DEAD/DEAH box helicase
ResIII	PF04851	172 - 318	5.9e-09	Type III restriction enzyme, res subunit
Helicase_C	PF00271	382 - 476	7.8e-30	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011549)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g40600 FvH4_3g40620
malus_domestica	MD03G1050800.v1.1 MD11G1052800.v1.1
prunus_persica	Prupe.6G040300_v2.0.a1 Prupe.6G040300_v2.0.a1
pyrus_communis	pycom03g04010 pycom11g04300
rosa_chinensis	RchiOBHm_Chr5g0073371
rosa_laevigata	RLG00000036381
rosa_multiflora	Rmu_sc0024948.1_g000001
rosa_roxburghii	Rroxscaffold_1G00007870
rosa_rugosa	Rorug05G0423000 Rorug05G0423100 Rorug05G0423200
rosa_samantha	Rh5AG479600 Rh5BG500800 Rh5CG523900 Rh5DG512700
rosa_wichuraiana	Rw5G044590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	254
AatII	GACGTC	1 cut(s)	1341
AccB1I	GGYRCC	1 cut(s)	373
AccBSI	CCGCTC	2 cut(s)	212, 1424
AccIII	TCCGGA	1 cut(s)	80
AciI	CCGC	9 cut(s)	60, 66, 156, 207, 210, 242, 325, 904, 1424
AclWI	GGATC	3 cut(s)	1377, 1435, 1519
AcoI	YGGCCR	1 cut(s)	222
AcsI	RAATTY	2 cut(s)	828, 1277
AcuI	CTGAAG	2 cut(s)	975, 1215
AcyI	GRCGYC	2 cut(s)	249, 1338
AdeI	CACNNNGTG	1 cut(s)	1181
AfaI	GTAC	3 cut(s)	618, 1246, 1398
AgsI	TTSAA	5 cut(s)	694, 881, 965, 1166, 1617
AhdI	GACNNNNNGTC	1 cut(s)	151
AjnI	CCWGG	2 cut(s)	778, 975
AleI	CACNNNNGTG	1 cut(s)	818
AloI	GAACNNNNNNTCC	2 cut(s)	270, 302
Alw26I	GTCTC	1 cut(s)	1345
AlwI	GGATC	3 cut(s)	1377, 1435, 1519
AlwNI	CAGNNNCTG	1 cut(s)	1577
Ama87I	CYCGRG	1 cut(s)	1116
Aor13HI	TCCGGA	1 cut(s)	80
AoxI	GGCC	3 cut(s)	222, 621, 1625
ApaI	GGGCCC	1 cut(s)	1629
ApeKI	GCWGC	7 cut(s)	158, 539, 1265, 1571, 1574, 1577, 1697
ApoI	RAATTY	2 cut(s)	828, 1277
ArsI	GACNNNNNNTTYG	2 cut(s)	860, 892
AspLEI	GCGC	1 cut(s)	515
AspS9I	GGNCC	5 cut(s)	283, 602, 622, 1625, 1626
AsuC2I	CCSGG	2 cut(s)	196, 371
AsuHPI	GGTGA	3 cut(s)	11, 608, 910
AvaI	CYCGRG	1 cut(s)	1116
AvaII	GGWCC	2 cut(s)	283, 602
BaeGI	GKGCMC	1 cut(s)	1629
BanI	GGYRCC	1 cut(s)	373
BanII	GRGCYC	1 cut(s)	1629
BarI	GAAGNNNNNNTAC	2 cut(s)	1380, 1412
BauI	CACGAG	1 cut(s)	1326
BbsI	GAAGAC	4 cut(s)	1082, 1178, 1550, 1605
BbvI	GCAGC	7 cut(s)	145, 526, 1252, 1561, 1564, 1583, 1709
BccI	CCATC	1 cut(s)	593
BceAI	ACGGC	2 cut(s)	236, 256
BciT130I	CCWGG	2 cut(s)	780, 977
BciVI	GTATCC	1 cut(s)	434
BcnI	CCSGG	2 cut(s)	196, 371
BcoDI	GTCTC	1 cut(s)	1345
BfaI	CTAG	7 cut(s)	411, 608, 630, 825, 845, 1526, 1593
BfmI	CTRYAG	1 cut(s)	1029
BfuI	GTATCC	1 cut(s)	434
BglII	AGATCT	1 cut(s)	737
BisI	GCNGC	9 cut(s)	159, 210, 326, 540, 1266, 1572, 1575, 1578, 1698
BlpI	GCTNAGC	1 cut(s)	729
BlsI	GCNGC	9 cut(s)	160, 211, 327, 541, 1267, 1573, 1576, 1579, 1699
Bme1390I	CCNGG	4 cut(s)	196, 371, 780, 977
Bme18I	GGWCC	2 cut(s)	283, 602
BmeRI	GACNNNNNGTC	1 cut(s)	151
BmeT110I	CYCGRG	1 cut(s)	1116
BmgT120I	GGNCC	5 cut(s)	283, 602, 622, 1625, 1626
BmrFI	CCNGG	4 cut(s)	196, 371, 780, 977
BmsI	GCATC	3 cut(s)	891, 931, 1331
BpiI	GAAGAC	4 cut(s)	1082, 1178, 1550, 1605
Bpu1102I	GCTNAGC	1 cut(s)	729
BpuEI	CTTGAG	2 cut(s)	453, 704
BpuMI	CCSGG	2 cut(s)	196, 371
BsaHI	GRCGYC	2 cut(s)	249, 1338
BsaJI	CCNNGG	2 cut(s)	369, 975
BsaWI	WCCGGW	3 cut(s)	80, 1401, 1675
BsaXI	ACNNNNNCTCC	6 cut(s)	104, 116, 134, 146, 270, 300
Bse118I	RCCGGY	1 cut(s)	220
Bse1I	ACTGG	5 cut(s)	479, 526, 624, 995, 1420
BseAI	TCCGGA	1 cut(s)	80
BseBI	CCWGG	2 cut(s)	780, 977
BseDI	CCNNGG	2 cut(s)	369, 975
BseGI	GGATG	1 cut(s)	1135
BseMII	CTCAG	7 cut(s)	14, 275, 502, 720, 732, 1058, 1356
BseNI	ACTGG	5 cut(s)	479, 526, 624, 995, 1420
BseRI	GAGGAG	8 cut(s)	6, 67, 106, 109, 160, 326, 354, 1121
BseSI	GKGCMC	1 cut(s)	1629
BseXI	GCAGC	7 cut(s)	145, 526, 1252, 1561, 1564, 1583, 1709
BsgI	GTGCAG	1 cut(s)	1716
BshFI	GGCC	3 cut(s)	224, 623, 1627
BshNI	GGYRCC	1 cut(s)	373
BsiHKCI	CYCGRG	1 cut(s)	1116
BsiSI	CCGG	7 cut(s)	81, 196, 221, 299, 371, 1402, 1676
BslFI	GGGAC	2 cut(s)	242, 1449
BsmAI	GTCTC	1 cut(s)	1345
BsmBI	CGTCTC	1 cut(s)	1345
BsmFI	GGGAC	2 cut(s)	242, 1449
BsmI	GAATGC	2 cut(s)	867, 1525
BsnI	GGCC	3 cut(s)	224, 623, 1627
BsoBI	CYCGRG	1 cut(s)	1116
Bsp120I	GGGCCC	1 cut(s)	1625
Bsp1286I	GDGCHC	1 cut(s)	1629
Bsp13I	TCCGGA	1 cut(s)	80
Bsp1407I	TGTACA	1 cut(s)	1396
Bsp143I	GATC	8 cut(s)	94, 737, 793, 1081, 1369, 1427, 1459, 1511
Bsp1720I	GCTNAGC	1 cut(s)	729
BspACI	CCGC	9 cut(s)	60, 66, 156, 207, 210, 242, 325, 904, 1424
BspANI	GGCC	3 cut(s)	224, 623, 1627
BspCNI	CTCAG	7 cut(s)	15, 274, 501, 721, 733, 1057, 1355
BspEI	TCCGGA	1 cut(s)	80
BspPI	GGATC	3 cut(s)	1377, 1435, 1519
BspQI	GCTCTTC	3 cut(s)	1236, 1373, 1414
BspT107I	GGYRCC	1 cut(s)	373
BsrBI	CCGCTC	2 cut(s)	212, 1424
BsrFI	RCCGGY	1 cut(s)	220
BsrGI	TGTACA	1 cut(s)	1396
BsrI	ACTGG	5 cut(s)	479, 526, 624, 995, 1420
BssAI	RCCGGY	1 cut(s)	220
BssECI	CCNNGG	2 cut(s)	369, 975
BssMI	GATC	8 cut(s)	94, 737, 793, 1081, 1369, 1427, 1459, 1511
BssNI	GRCGYC	2 cut(s)	249, 1338
BssSI	CACGAG	1 cut(s)	1326
Bst2BI	CACGAG	1 cut(s)	1326
Bst2UI	CCWGG	2 cut(s)	780, 977
Bst4CI	ACNGT	1 cut(s)	1070
Bst6I	CTCTTC	5 cut(s)	651, 951, 1236, 1373, 1414
BstACI	GRCGYC	2 cut(s)	249, 1338
BstAPI	GCANNNNNTGC	2 cut(s)	1577, 1706
BstAUI	TGTACA	1 cut(s)	1396
BstC8I	GCNNGC	5 cut(s)	104, 222, 639, 1221, 1590
BstDEI	CTNAG	7 cut(s)	23, 261, 488, 729, 741, 1044, 1342
BstF5I	GGATG	1 cut(s)	1135
BstHHI	GCGC	1 cut(s)	515
BstKTI	GATC	8 cut(s)	97, 740, 796, 1084, 1372, 1430, 1462, 1514
BstMAI	GTCTC	1 cut(s)	1345
BstMBI	GATC	8 cut(s)	94, 737, 793, 1081, 1369, 1427, 1459, 1511
BstMWI	GCNNNNNNNGC	6 cut(s)	230, 545, 1127, 1205, 1577, 1706
BstNI	CCWGG	2 cut(s)	780, 977
BstNSI	RCATGY	1 cut(s)	1223
BstSCI	CCNGG	4 cut(s)	194, 369, 778, 975
BstSFI	CTRYAG	1 cut(s)	1029
BstSLI	GKGCMC	1 cut(s)	1629
BstV1I	GCAGC	7 cut(s)	145, 526, 1252, 1561, 1564, 1583, 1709
BstV2I	GAAGAC	4 cut(s)	1082, 1178, 1550, 1605
BstX2I	RGATCY	3 cut(s)	737, 1369, 1511
BstXI	CCANNNNNNTGG	1 cut(s)	1303
BstYI	RGATCY	3 cut(s)	737, 1369, 1511
BsuI	GTATCC	1 cut(s)	434
BsuRI	GGCC	3 cut(s)	224, 623, 1627
BtsCI	GGATG	1 cut(s)	1135
BtsIMutI	CAGTG	5 cut(s)	269, 496, 1002, 1075, 1455
Cac8I	GCNNGC	5 cut(s)	104, 222, 639, 1221, 1590
CaiI	CAGNNNCTG	1 cut(s)	1577
CfoI	GCGC	1 cut(s)	515
Cfr10I	RCCGGY	1 cut(s)	220
Cfr13I	GGNCC	5 cut(s)	283, 602, 622, 1625, 1626
CseI	GACGC	2 cut(s)	98, 257
Csp6I	GTAC	3 cut(s)	617, 1245, 1397
CspCI	CAANNNNNGTGG	6 cut(s)	594, 629, 690, 725, 1300, 1335
CviAII	CATG	7 cut(s)	437, 475, 871, 1220, 1235, 1384, 1663
CviQI	GTAC	3 cut(s)	617, 1245, 1397
DdeI	CTNAG	7 cut(s)	23, 261, 488, 729, 741, 1044, 1342
DpnI	GATC	8 cut(s)	96, 739, 795, 1083, 1371, 1429, 1461, 1513
DpnII	GATC	8 cut(s)	94, 737, 793, 1081, 1369, 1427, 1459, 1511
DraIII	CACNNNGTG	1 cut(s)	1181
DrdI	GACNNNNNNGTC	1 cut(s)	254
DriI	GACNNNNNGTC	1 cut(s)	151
DseDI	GACNNNNNNGTC	1 cut(s)	254
EaeI	YGGCCR	1 cut(s)	222
Eam1104I	CTCTTC	5 cut(s)	651, 951, 1236, 1373, 1414
Eam1105I	GACNNNNNGTC	1 cut(s)	151
EarI	CTCTTC	5 cut(s)	651, 951, 1236, 1373, 1414
EciI	GGCGGA	1 cut(s)	196
Eco24I	GRGCYC	1 cut(s)	1629
Eco47I	GGWCC	2 cut(s)	283, 602
Eco57I	CTGAAG	2 cut(s)	975, 1215
Eco88I	CYCGRG	1 cut(s)	1116
EcoO109I	RGGNCCY	2 cut(s)	283, 1625
EcoRII	CCWGG	2 cut(s)	778, 975
EcoT38I	GRGCYC	1 cut(s)	1629
Esp3I	CGTCTC	1 cut(s)	1345
FaeI	CATG	7 cut(s)	440, 478, 874, 1223, 1238, 1387, 1666
FaqI	GGGAC	2 cut(s)	242, 1449
FatI	CATG	7 cut(s)	436, 474, 870, 1219, 1234, 1383, 1662
FauI	CCCGC	2 cut(s)	249, 1417
Fnu4HI	GCNGC	9 cut(s)	159, 210, 326, 540, 1266, 1572, 1575, 1578, 1698
FokI	GGATG	1 cut(s)	1122
FriOI	GRGCYC	1 cut(s)	1629
Fsp4HI	GCNGC	9 cut(s)	159, 210, 326, 540, 1266, 1572, 1575, 1578, 1698
FspBI	CTAG	7 cut(s)	411, 608, 630, 825, 845, 1526, 1593
GlaI	GCGC	1 cut(s)	514
GluI	GCNGC	9 cut(s)	159, 210, 326, 540, 1266, 1572, 1575, 1578, 1698
HaeIII	GGCC	3 cut(s)	224, 623, 1627
HapII	CCGG	7 cut(s)	81, 196, 221, 299, 371, 1402, 1676
HgaI	GACGC	2 cut(s)	98, 257
HhaI	GCGC	1 cut(s)	515
Hin1I	GRCGYC	2 cut(s)	249, 1338
Hin1II	CATG	7 cut(s)	440, 478, 874, 1223, 1238, 1387, 1666
Hin6I	GCGC	1 cut(s)	513
HinP1I	GCGC	1 cut(s)	513
HindIII	AAGCTT	1 cut(s)	1197
HinfI	GANTC	5 cut(s)	356, 383, 686, 786, 1109
HpaII	CCGG	7 cut(s)	81, 196, 221, 299, 371, 1402, 1676
HphI	GGTGA	3 cut(s)	11, 608, 910
Hpy166II	GTNNAC	2 cut(s)	1241, 1399
Hpy188I	TCNGA	8 cut(s)	99, 277, 290, 742, 916, 1047, 1377, 1672
Hpy188III	TCNNGA	9 cut(s)	81, 353, 683, 825, 845, 1064, 1116, 1344, 1463
Hpy8I	GTNNAC	2 cut(s)	1241, 1399
Hpy99I	CGWCG	4 cut(s)	92, 251, 257, 277
HpyAV	CCTTC	9 cut(s)	415, 489, 700, 959, 1000, 1051, 1404, 1459, 1548
HpyCH4III	ACNGT	1 cut(s)	1070
HpyCH4IV	ACGT	3 cut(s)	1243, 1338, 1356
HpyF10VI	GCNNNNNNNGC	6 cut(s)	230, 545, 1127, 1205, 1577, 1706
HpyF3I	CTNAG	7 cut(s)	23, 261, 488, 729, 741, 1044, 1342
HpySE526I	ACGT	3 cut(s)	1243, 1338, 1356
Hsp92I	GRCGYC	2 cut(s)	249, 1338
Hsp92II	CATG	7 cut(s)	440, 478, 874, 1223, 1238, 1387, 1666
HspAI	GCGC	1 cut(s)	513
Kpn2I	TCCGGA	1 cut(s)	80
KroI	GCCGGC	1 cut(s)	220
KroNI	GCCGGC	1 cut(s)	222
Kzo9I	GATC	8 cut(s)	94, 737, 793, 1081, 1369, 1427, 1459, 1511
LguI	GCTCTTC	3 cut(s)	1236, 1373, 1414
LmnI	GCTCC	3 cut(s)	99, 197, 367
Lsp1109I	GCAGC	7 cut(s)	145, 526, 1252, 1561, 1564, 1583, 1709
LweI	GCATC	3 cut(s)	891, 931, 1331
MaeI	CTAG	7 cut(s)	411, 608, 630, 825, 845, 1526, 1593
MaeII	ACGT	3 cut(s)	1243, 1338, 1356
MaeIII	GTNAC	1 cut(s)	1039
MalI	GATC	8 cut(s)	96, 739, 795, 1083, 1371, 1429, 1461, 1513
MbiI	CCGCTC	2 cut(s)	212, 1424
MboI	GATC	8 cut(s)	94, 737, 793, 1081, 1369, 1427, 1459, 1511
MfeI	CAATTG	1 cut(s)	378
MflI	RGATCY	3 cut(s)	737, 1369, 1511
MhlI	GDGCHC	1 cut(s)	1629
MluCI	AATT	6 cut(s)	331, 378, 459, 828, 1277, 1363
MlyI	GAGTC	4 cut(s)	350, 392, 695, 1118
MmeI	TCCRAC	3 cut(s)	147, 159, 255
MroI	TCCGGA	1 cut(s)	80
MroNI	GCCGGC	1 cut(s)	220
MseI	TTAA	3 cut(s)	330, 759, 1148
MslI	CAYNNNNRTG	3 cut(s)	186, 554, 818
MspA1I	CMGCKG	2 cut(s)	158, 1574
MspI	CCGG	7 cut(s)	81, 196, 221, 299, 371, 1402, 1676
MspR9I	CCNGG	4 cut(s)	196, 371, 780, 977
MunI	CAATTG	1 cut(s)	378
Mva1269I	GAATGC	2 cut(s)	867, 1525
MvaI	CCWGG	2 cut(s)	780, 977
MwoI	GCNNNNNNNGC	6 cut(s)	230, 545, 1127, 1205, 1577, 1706
NaeI	GCCGGC	1 cut(s)	222
NciI	CCSGG	2 cut(s)	196, 371
NdeII	GATC	8 cut(s)	94, 737, 793, 1081, 1369, 1427, 1459, 1511
NgoMIV	GCCGGC	1 cut(s)	220
NlaIII	CATG	7 cut(s)	440, 478, 874, 1223, 1238, 1387, 1666
NspI	RCATGY	1 cut(s)	1223
OliI	CACNNNNGTG	1 cut(s)	818
PaeI	GCATGC	1 cut(s)	1223
PaeR7I	CTCGAG	1 cut(s)	1116
PciSI	GCTCTTC	3 cut(s)	1236, 1373, 1414
PcsI	WCGNNNNNNNCGW	1 cut(s)	286
PctI	GAATGC	2 cut(s)	867, 1525
PdiI	GCCGGC	1 cut(s)	222
PfeI	GAWTC	1 cut(s)	786
PflFI	GACNNNGTC	1 cut(s)	251
PfoI	TCCNGGA	1 cut(s)	778
PkrI	GCNGC	9 cut(s)	160, 211, 327, 541, 1267, 1573, 1576, 1579, 1699
PleI	GAGTC	4 cut(s)	350, 391, 694, 1117
PpsI	GAGTC	4 cut(s)	350, 391, 694, 1117
PpuMI	RGGWCCY	1 cut(s)	283
Psp5II	RGGWCCY	1 cut(s)	283
Psp6I	CCWGG	2 cut(s)	778, 975
PspGI	CCWGG	2 cut(s)	778, 975
PspOMI	GGGCCC	1 cut(s)	1625
PspPI	GGNCC	5 cut(s)	283, 602, 622, 1625, 1626
PspPPI	RGGWCCY	1 cut(s)	283
PstNI	CAGNNNCTG	1 cut(s)	1577
PsuI	RGATCY	3 cut(s)	737, 1369, 1511
PsyI	GACNNNGTC	1 cut(s)	251
PvuII	CAGCTG	1 cut(s)	1574
RsaI	GTAC	3 cut(s)	618, 1246, 1398
RsaNI	GTAC	3 cut(s)	617, 1245, 1397
RseI	CAYNNNNRTG	3 cut(s)	186, 554, 818
SapI	GCTCTTC	3 cut(s)	1236, 1373, 1414
SaqAI	TTAA	3 cut(s)	330, 759, 1148
SatI	GCNGC	9 cut(s)	159, 210, 326, 540, 1266, 1572, 1575, 1578, 1698
Sau3AI	GATC	8 cut(s)	94, 737, 793, 1081, 1369, 1427, 1459, 1511
Sau96I	GGNCC	5 cut(s)	283, 602, 622, 1625, 1626
SchI	GAGTC	4 cut(s)	350, 392, 695, 1118
ScrFI	CCNGG	4 cut(s)	196, 371, 780, 977
SduI	GDGCHC	1 cut(s)	1629
SfaNI	GCATC	3 cut(s)	891, 931, 1331
SfcI	CTRYAG	1 cut(s)	1029
Sfr274I	CTCGAG	1 cut(s)	1116
SinI	GGWCC	2 cut(s)	283, 602
SlaI	CTCGAG	1 cut(s)	1116
SmiMI	CAYNNNNRTG	3 cut(s)	186, 554, 818
SmlI	CTYRAG	3 cut(s)	468, 683, 1116
SmoI	CTYRAG	3 cut(s)	468, 683, 1116
SphI	GCATGC	1 cut(s)	1223
Sse9I	AATT	6 cut(s)	331, 378, 459, 828, 1277, 1363
SsiI	CCGC	9 cut(s)	60, 66, 156, 207, 210, 242, 325, 904, 1424
SspI	AATATT	2 cut(s)	763, 983
SspMI	CTAG	7 cut(s)	411, 608, 630, 825, 845, 1526, 1593
StyD4I	CCNGG	4 cut(s)	194, 369, 778, 975
TaaI	ACNGT	1 cut(s)	1070
TaiI	ACGT	3 cut(s)	1246, 1341, 1359
TaqI	TCGA	2 cut(s)	748, 1117
TasI	AATT	6 cut(s)	331, 378, 459, 828, 1277, 1363
TatI	WGTACW	1 cut(s)	1396
TauI	GCSGC	2 cut(s)	212, 328
TfiI	GAWTC	1 cut(s)	786
Tru1I	TTAA	3 cut(s)	330, 759, 1148
Tru9I	TTAA	3 cut(s)	330, 759, 1148
TscAI	CASTG	5 cut(s)	269, 496, 1002, 1075, 1462
TseI	GCWGC	7 cut(s)	158, 539, 1265, 1571, 1574, 1577, 1697
TspDTI	ATGAA	8 cut(s)	153, 308, 425, 434, 778, 864, 1223, 1651
TspRI	CASTG	5 cut(s)	269, 496, 1002, 1075, 1462
Tth111I	GACNNNGTC	1 cut(s)	251
VpaK11BI	GGWCC	2 cut(s)	283, 602
XapI	RAATTY	2 cut(s)	828, 1277
XbaI	TCTAGA	2 cut(s)	824, 844
XceI	RCATGY	1 cut(s)	1223
XhoI	CTCGAG	1 cut(s)	1116
XspI	CTAG	7 cut(s)	411, 608, 630, 825, 845, 1526, 1593
ZraI	GACGTC	1 cut(s)	1339

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.