RchiOBHm_Chr6g0270531

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0008156
Physical Location & Seq
Forward (+)
28380869 .. 28386338
5470 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ24271

Sequence Viewer

Length: 2466 bp
ATGGTATTGGCGCGCACAAGAGGGCATTTGGAATTGGAATTGGAATGGGCGAGGAGGGTAATGAGGAGCTTACGCTTATTGGGGCTTCCTCTTGCTTCAACGATTAAAACTATAATTCCTTGTAAAGTTAAACCCAGGCAATTCCACCTGTATCACAGTTCGAAACCCTGTTCTTCATGCTCTTATCCCTCCCTGGGTAAACACTCAACTGCCATTGCCGGCGCTCTTTCCCTCGCCGAGACTTCAAACTCCTGTTTTCTTGGTCTCCAAATCCATGCCCGCATCATCAAGCTGGGACTCACTAGCGACATTTTTTCATTGAATAACTTGATCAAAGTGTACTCGAAATGTGGGCAACTGGGTGATGCGCTCAAGGTGTTTGATGAAATGCCTGAGAGGAACCTCGTCTCTTGGACTCTGCTCGTCACTGCTGCCGTCCAGGATGGTGAGTTTGAATTGGGATTGGAGGTTTATTCGGAATTGGTAAAAACGGGCTTGAGGCCGAATGAGTTCTCTGTTGCTAGTGTTCTCAAGGCATGTGCAAGTACGGAAGCGTATAAGTTTGGCGTCAGTGTTCATTGTTGTGCTCTGAAACTTGGGATTGAGCAGAACCTTTTTGTCGCTAGCTCTCTTTTGAACATGTATGCTGAGTTGGAGGATGTTGAATCCGCGGAGGGGGTGTTTGAGTCTACGACCGATCTTGATACTGCTTGTTGGAATACTATGATTGGAGGGTATACGAAGTGTGGCTATGGCTTTGAATCCTTGAAGCTTGTGTCTTTAATGGTGTGCAAAGGGATAAGCATGGACCACTTCACCTTTGTTAATGCTCTTAAGGGGTGCTCCTCTATGGGGAATTTAGATTTTGGGAAGCAACTACATGGATTGCTCATCCGTAGTGAGATGGAATTTAGTACCTCAGTAATGAACGCTCTTATGGATATGTACTCTACACACGGGAAGAAGGATTTGGCTTTCAAAGTTTTCAATAGGATAAAAACCAAAGACATAATATCCTGGAACACTGCATTTGGGGTCTTTTCTGAAGACATAAATGCAAAAGAGCTTTTAAACTTAGTCCATGAGTTCATGCTAGCAAACATGAAGCCAAACCATGTCACTTTCTCAGTCTTGTTTAGACAATGTGGTCAGCTACTTGATCTCAACCTTGGGCTTCAGTTTTTCTGCCTTGCATTGCAATTTGGAGTCTATAATGAAGCTATTGTCAGAAGCTCATTAATGAACATGTTTTCTAGATGTGGGGCTGTGGAGATGGCATTCTTGTTTTTTGACAGCTTACTGTACAAAAGCATAACTTCTTGGAATGAGTTGATTTCTGGATGCAATTCAAACTATTACTACGTGGAAGCCATGAAGAGTTTTTACAATCTATGGCACTTGGGAGTTGGAGTCAATGAATTTACCTTGTCCATTATATTGGAAACTTGTTTTAGAGATGAACACCAACAAATGGTTAGACAAATTCATGGTGCTATTGTCAAGTCTGGCTATTCATTGCATGGATATGTTTGTAGCTCATTAATTAAATGCTATGTTAAACTTGGACAACTTGATGAGTCCTTTGAGTTTTTTAATGGGTTTGAGAGATTGGATGTGGAAATTTGGGGGACCATGATATCTGCGCTGGTGCATCAGGGATATCATTTTCAAGCTATCAAATTTCTCAACTCTCTGATGGAAGCTGGCAGGAAGCCTGATGAATTTATCTTGGGTAGTATTCTAAGTAGTTGTGCTCATATTGCAGGCTATCATTTAACTCATTCTGTTCATTCCATTGTCATCAAAATGGGATTTCAAAAACAAGTATTTGTGGTTAGTGCAGTTATAGATGCTTACGCAAAATGCGGGGATATTGAAAATGCAAGGATGATATTTAGCCAGTCATCTAGATCTGGCGATGTAGTTATATGTAATGCTATGATCATAGCTTGTGCTCATCACGGTCTGGTCGAGGAAGCTATGGCAATCTTTGAGAAAATGAAGTTGGCTAATCTAAAGCCCAGCCAAGCCACATTTGTGTCAGTGTTAGCAGCTTGTAGCCACATGGGACGGGTTGATCAAGGTCGTTTGTTGTTTGAATCAATAGCCTCTGATCATAAGTTGAAACAAATTTCTCAGGATATTTATGGTTGCATGGTTGATATGCTTTCACGAAATGGATTCCTTGAAGAAGCTAGACAAATAATTGAAGTAGTGCCTTATACTCCTTGGCCTGCCATATTAAGATCCTTGCTTAGTGGTTGTCGGACGCATGGGAACTTACAGTTGGGAGAATGGGCTGTTAAGGAGTTAGTCCAGTTGGTTCCAGAAAATGATGCACCTTATGTATTATTGTCAAAGGCTCATTCTGAAGCAGGTAGTTGGGAGGATGCTACAAAGATAAGGAGGGAAATGATAGAAAGAGGGGTACAAAAAAATACAGGATATAGTTGGATTGAGCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 Pkinase_Tyr

Protein Analysis

821

Amino Acids

91.7

Weight (kDa)

6.46

Isoelectric Point (pI)

32.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 103 - 135 4.2e-06 PPR repeat family
PPR PF01535 106 - 134 4.1e-06 PPR repeat
PPR_2 PF13041 134 - 181 1e-05 PPR repeat family
PPR_2 PF13041 235 - 282 3.5e-07 PPR repeat family
PPR_2 PF13041 640 - 687 2.4e-09 PPR repeat family
PPR PF01535 642 - 669 1.9e-06 PPR repeat
E_motif PF20431 758 - 820 1.5e-13 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1146
Acc36I ACCTGC 1 cut(s) 2366
AccB7I CCANNNNNTGG 1 cut(s) 1471
AccI GTMKAC 2 cut(s) 689, 737
AccII CGCG 2 cut(s) 13, 671
AciI CCGC 4 cut(s) 280, 669, 671, 1866
AclWI GGATC 1 cut(s) 2241
AcsI RAATTY 8 cut(s) 856, 908, 1418, 1482, 1620, 1679, 1721, 2130
AcuI CTGAAG 3 cut(s) 1065, 1160, 2391
AcyI GRCGYC 1 cut(s) 567
AfaI GTAC 6 cut(s) 341, 547, 916, 947, 1304, 2430
AfiI CCNNNNNNNGG 4 cut(s) 194, 675, 852, 1471
AflII CTTAAG 1 cut(s) 833
AflIII ACRYGT 2 cut(s) 639, 1245
AjnI CCWGG 4 cut(s) 134, 192, 438, 1016
AjuI GAANNNNNNNTTGG 6 cut(s) 953, 985, 1988, 2020, 2270, 2302
AleI CACNNNNGTG 1 cut(s) 2036
Alw21I GWGCWC 4 cut(s) 589, 845, 1756, 1957
Alw26I GTCTC 3 cut(s) 233, 269, 412
AlwI GGATC 1 cut(s) 2241
AoxI GGCC 2 cut(s) 500, 2231
ApeKI GCWGC 2 cut(s) 431, 2051
ApoI RAATTY 8 cut(s) 856, 908, 1418, 1482, 1620, 1679, 1721, 2130
AseI ATTAAT 2 cut(s) 1238, 1541
Asp700I GAANNNNTTC 1 cut(s) 509
AspLEI GCGC 5 cut(s) 13, 15, 224, 370, 1645
AspS9I GGNCC 2 cut(s) 808, 1629
AsuHPI GGTGA 3 cut(s) 374, 458, 808
AsuII TTCGAA 1 cut(s) 161
AsuNHI GCTAGC 2 cut(s) 623, 1093
AvaII GGWCC 2 cut(s) 808, 1629
BarI GAAGNNNNNNTAC 2 cut(s) 1367, 1399
BbsI GAAGAC 1 cut(s) 1053
Bbv12I GWGCWC 4 cut(s) 589, 845, 1756, 1957
BbvI GCAGC 2 cut(s) 418, 2063
BccI CCATC 4 cut(s) 437, 898, 1267, 1690
BceAI ACGGC 1 cut(s) 419
BciT130I CCWGG 4 cut(s) 136, 194, 440, 1018
BclI TGATCA 4 cut(s) 330, 1941, 2077, 2113
BcoDI GTCTC 3 cut(s) 233, 269, 412
BfaI CTAG 7 cut(s) 303, 522, 624, 1094, 1254, 1908, 2196
BfmI CTRYAG 1 cut(s) 2462
BfoI RGCGCY 1 cut(s) 225
BfrI CTTAAG 1 cut(s) 833
BfuAI ACCTGC 1 cut(s) 2366
BglII AGATCT 1 cut(s) 1910
BisI GCNGC 2 cut(s) 432, 2052
BlsI GCNGC 2 cut(s) 433, 2053
Bme1390I CCNGG 4 cut(s) 136, 194, 440, 1018
Bme18I GGWCC 2 cut(s) 808, 1629
BmgT120I GGNCC 2 cut(s) 808, 1629
BmiI GGNNCC 3 cut(s) 401, 1630, 2325
BmrFI CCNGG 4 cut(s) 136, 194, 440, 1018
BmrI ACTGGG 1 cut(s) 368
BmsI GCATC 7 cut(s) 291, 355, 1331, 1660, 1840, 2326, 2380
BmtI GCTAGC 2 cut(s) 627, 1097
BmuI ACTGGG 1 cut(s) 368
BpiI GAAGAC 1 cut(s) 1053
Bpu14I TTCGAA 1 cut(s) 161
BpuEI CTTGAG 3 cut(s) 356, 515, 517
BsaAI YACGTR 1 cut(s) 1363
BsaHI GRCGYC 1 cut(s) 567
BsaI GGTCTC 1 cut(s) 269
BsaJI CCNNGG 6 cut(s) 134, 192, 193, 669, 1168, 2228
BsaXI ACNNNNNCTCC 4 cut(s) 665, 695, 1395, 1425
Bsc4I CCNNNNNNNGG 4 cut(s) 194, 675, 852, 1471
Bse118I RCCGGY 1 cut(s) 218
Bse1I ACTGG 3 cut(s) 363, 1900, 2317
Bse3DI GCAATG 3 cut(s) 213, 1193, 1514
BseBI CCWGG 4 cut(s) 136, 194, 440, 1018
BseDI CCNNGG 6 cut(s) 134, 192, 193, 669, 1168, 2228
BseGI GGATG 7 cut(s) 448, 664, 891, 1346, 1618, 1893, 2395
BseLI CCNNNNNNNGG 4 cut(s) 194, 675, 852, 1471
BseMI GCAATG 3 cut(s) 213, 1193, 1514
BseMII CTCAG 5 cut(s) 384, 639, 933, 1140, 2150
BseNI ACTGG 3 cut(s) 363, 1900, 2317
BsePI GCGCGC 1 cut(s) 11
BseRI GAGGAG 3 cut(s) 67, 79, 835
BseXI GCAGC 2 cut(s) 418, 2063
BseYI CCCAGC 2 cut(s) 292, 2021
BsgI GTGCAG 1 cut(s) 1860
Bsh1236I CGCG 2 cut(s) 13, 671
Bsh1285I CGRYCG 1 cut(s) 696
BshFI GGCC 2 cut(s) 502, 2233
BsiEI CGRYCG 1 cut(s) 696
BsiHKAI GWGCWC 4 cut(s) 589, 845, 1756, 1957
BsiSI CCGG 1 cut(s) 219
BslFI GGGAC 3 cut(s) 309, 1642, 2082
BslI CCNNNNNNNGG 4 cut(s) 194, 675, 852, 1471
BsmAI GTCTC 3 cut(s) 233, 269, 412
BsmBI CGTCTC 1 cut(s) 412
BsmFI GGGAC 3 cut(s) 309, 1642, 2082
BsmI GAATGC 1 cut(s) 1277
BsnI GGCC 2 cut(s) 502, 2233
Bso31I GGTCTC 1 cut(s) 269
Bsp119I TTCGAA 1 cut(s) 161
Bsp1286I GDGCHC 4 cut(s) 589, 845, 1756, 1957
Bsp1407I TGTACA 1 cut(s) 1302
Bsp143I GATC 8 cut(s) 330, 697, 1159, 1910, 1941, 2077, 2113, 2246
BspACI CCGC 4 cut(s) 280, 669, 671, 1866
BspANI GGCC 2 cut(s) 502, 2233
BspCNI CTCAG 5 cut(s) 385, 640, 932, 1139, 2149
BspFNI CGCG 2 cut(s) 13, 671
BspLI GGNNCC 3 cut(s) 401, 1630, 2325
BspMI ACCTGC 1 cut(s) 2366
BspOI GCTAGC 2 cut(s) 627, 1097
BspPI GGATC 1 cut(s) 2241
BspT104I TTCGAA 1 cut(s) 161
BspTI CTTAAG 1 cut(s) 833
BspTNI GGTCTC 1 cut(s) 269
BsrDI GCAATG 3 cut(s) 213, 1193, 1514
BsrFI RCCGGY 1 cut(s) 218
BsrGI TGTACA 1 cut(s) 1302
BsrI ACTGG 3 cut(s) 363, 1900, 2317
BssAI RCCGGY 1 cut(s) 218
BssECI CCNNGG 6 cut(s) 134, 192, 193, 669, 1168, 2228
BssHII GCGCGC 1 cut(s) 11
BssMI GATC 8 cut(s) 330, 697, 1159, 1910, 1941, 2077, 2113, 2246
BssNAI GTATAC 1 cut(s) 738
BssNI GRCGYC 1 cut(s) 567
BssT1I CCWWGG 2 cut(s) 1168, 2228
Bst1107I GTATAC 1 cut(s) 738
Bst2UI CCWGG 4 cut(s) 136, 194, 440, 1018
Bst4CI ACNGT 4 cut(s) 158, 1302, 1964, 2286
Bst6I CTCTTC 1 cut(s) 1370
BstACI GRCGYC 1 cut(s) 567
BstAFI CTTAAG 1 cut(s) 833
BstAUI TGTACA 1 cut(s) 1302
BstBAI YACGTR 1 cut(s) 1363
BstBI TTCGAA 1 cut(s) 161
BstC8I GCNNGC 8 cut(s) 13, 220, 280, 625, 1095, 1705, 1765, 2235
BstDEI CTNAG 8 cut(s) 393, 648, 919, 1075, 1126, 1742, 2136, 2255
BstDSI CCRYGG 1 cut(s) 669
BstF5I GGATG 7 cut(s) 448, 664, 891, 1346, 1618, 1893, 2395
BstFNI CGCG 2 cut(s) 13, 671
BstH2I RGCGCY 1 cut(s) 225
BstHHI GCGC 5 cut(s) 13, 15, 224, 370, 1645
BstKTI GATC 8 cut(s) 333, 700, 1162, 1913, 1944, 2080, 2116, 2249
BstMAI GTCTC 3 cut(s) 233, 269, 412
BstMBI GATC 8 cut(s) 330, 697, 1159, 1910, 1941, 2077, 2113, 2246
BstMCI CGRYCG 1 cut(s) 696
BstMWI GCNNNNNNNGC 1 cut(s) 1760
BstNI CCWGG 4 cut(s) 136, 194, 440, 1018
BstNSI RCATGY 3 cut(s) 540, 643, 1249
BstSCI CCNGG 4 cut(s) 134, 192, 438, 1016
BstSFI CTRYAG 1 cut(s) 2462
BstUI CGCG 2 cut(s) 13, 671
BstV1I GCAGC 2 cut(s) 418, 2063
BstV2I GAAGAC 1 cut(s) 1053
BstX2I RGATCY 2 cut(s) 1910, 2246
BstXI CCANNNNNNTGG 1 cut(s) 1438
BstYI RGATCY 2 cut(s) 1910, 2246
BstZ17I GTATAC 1 cut(s) 738
BsuRI GGCC 2 cut(s) 502, 2233
BtgI CCRYGG 1 cut(s) 669
BtgZI GCGATG 1 cut(s) 1932
BtsCI GGATG 7 cut(s) 448, 664, 891, 1346, 1618, 1893, 2395
BtsI GCAGTG 2 cut(s) 426, 1023
BtsIMutI CAGTG 4 cut(s) 426, 577, 1023, 2049
BveI ACCTGC 1 cut(s) 2366
Cac8I GCNNGC 8 cut(s) 13, 220, 280, 625, 1095, 1705, 1765, 2235
CfoI GCGC 5 cut(s) 13, 15, 224, 370, 1645
Cfr10I RCCGGY 1 cut(s) 218
Cfr13I GGNCC 2 cut(s) 808, 1629
Cfr42I CCGCGG 1 cut(s) 672
CseI GACGC 2 cut(s) 556, 2278
Csp6I GTAC 6 cut(s) 340, 546, 915, 946, 1303, 2429
CviQI GTAC 6 cut(s) 340, 546, 915, 946, 1303, 2429
DdeI CTNAG 8 cut(s) 393, 648, 919, 1075, 1126, 1742, 2136, 2255
DpnI GATC 8 cut(s) 332, 699, 1161, 1912, 1943, 2079, 2115, 2248
DpnII GATC 8 cut(s) 330, 697, 1159, 1910, 1941, 2077, 2113, 2246
DraI TTTAAA 1 cut(s) 1071
DrdI GACNNNNNNGTC 1 cut(s) 1146
DseDI GACNNNNNNGTC 1 cut(s) 1146
Eam1104I CTCTTC 1 cut(s) 1370
EarI CTCTTC 1 cut(s) 1370
Eco130I CCWWGG 2 cut(s) 1168, 2228
Eco31I GGTCTC 1 cut(s) 269
Eco32I GATATC 2 cut(s) 1638, 1661
Eco47I GGWCC 2 cut(s) 808, 1629
Eco57I CTGAAG 3 cut(s) 1065, 1160, 2391
EcoRII CCWGG 4 cut(s) 134, 192, 438, 1016
EcoRV GATATC 2 cut(s) 1638, 1661
EcoT14I CCWWGG 2 cut(s) 1168, 2228
ErhI CCWWGG 2 cut(s) 1168, 2228
Esp3I CGTCTC 1 cut(s) 412
FalI AAGNNNNNCTT 2 cut(s) 1300, 1332
FaqI GGGAC 3 cut(s) 309, 1642, 2082
FauI CCCGC 2 cut(s) 287, 1859
FbaI TGATCA 4 cut(s) 330, 1941, 2077, 2113
FblI GTMKAC 2 cut(s) 689, 737
Fnu4HI GCNGC 2 cut(s) 432, 2052
FokI GGATG 7 cut(s) 455, 671, 878, 1353, 1625, 1900, 2402
Fsp4HI GCNGC 2 cut(s) 432, 2052
FspBI CTAG 7 cut(s) 303, 522, 624, 1094, 1254, 1908, 2196
GlaI GCGC 5 cut(s) 12, 14, 223, 369, 1644
GluI GCNGC 2 cut(s) 432, 2052
GsaI CCCAGC 2 cut(s) 296, 2025
HaeII RGCGCY 1 cut(s) 225
HaeIII GGCC 2 cut(s) 502, 2233
HapII CCGG 1 cut(s) 219
HgaI GACGC 2 cut(s) 556, 2278
HhaI GCGC 5 cut(s) 13, 15, 224, 370, 1645
Hin1I GRCGYC 1 cut(s) 567
Hin6I GCGC 5 cut(s) 11, 13, 222, 368, 1643
HinP1I GCGC 5 cut(s) 11, 13, 222, 368, 1643
HindIII AAGCTT 1 cut(s) 770
HpaII CCGG 1 cut(s) 219
HphI GGTGA 3 cut(s) 374, 458, 808
Hpy166II GTNNAC 4 cut(s) 200, 340, 690, 738
Hpy188I TCNGA 8 cut(s) 478, 591, 1045, 1229, 1695, 2113, 2268, 2371
Hpy188III TCNNGA 7 cut(s) 701, 1254, 1338, 1908, 2138, 2172, 2327
Hpy8I GTNNAC 4 cut(s) 200, 340, 690, 738
HpyAV CCTTC 1 cut(s) 958
HpyCH4III ACNGT 4 cut(s) 158, 1302, 1964, 2286
HpyCH4IV ACGT 1 cut(s) 1362
HpyF10VI GCNNNNNNNGC 1 cut(s) 1760
HpyF3I CTNAG 8 cut(s) 393, 648, 919, 1075, 1126, 1742, 2136, 2255
HpySE526I ACGT 1 cut(s) 1362
Hsp92I GRCGYC 1 cut(s) 567
HspAI GCGC 5 cut(s) 11, 13, 222, 368, 1643
KroI GCCGGC 1 cut(s) 218
KroNI GCCGGC 1 cut(s) 220
Ksp22I TGATCA 4 cut(s) 330, 1941, 2077, 2113
KspI CCGCGG 1 cut(s) 672
Kzo9I GATC 8 cut(s) 330, 697, 1159, 1910, 1941, 2077, 2113, 2246
LmnI GCTCC 2 cut(s) 66, 848
Lsp1109I GCAGC 2 cut(s) 418, 2063
LweI GCATC 7 cut(s) 291, 355, 1331, 1660, 1840, 2326, 2380
MaeI CTAG 7 cut(s) 303, 522, 624, 1094, 1254, 1908, 2196
MaeII ACGT 1 cut(s) 1362
MaeIII GTNAC 2 cut(s) 424, 1117
MalI GATC 8 cut(s) 332, 699, 1161, 1912, 1943, 2079, 2115, 2248
MboI GATC 8 cut(s) 330, 697, 1159, 1910, 1941, 2077, 2113, 2246
MboII GAAGA 5 cut(s) 165, 973, 1058, 1387, 2201
MflI RGATCY 2 cut(s) 1910, 2246
MhlI GDGCHC 4 cut(s) 589, 845, 1756, 1957
MlyI GAGTC 6 cut(s) 291, 409, 695, 1215, 1419, 1586
MmeI TCCRAC 5 cut(s) 633, 695, 1387, 2246, 2432
MroNI GCCGGC 1 cut(s) 218
MroXI GAANNNNTTC 1 cut(s) 509
MslI CAYNNNNRTG 4 cut(s) 582, 1524, 1805, 2036
MspA1I CMGCKG 1 cut(s) 671
MspCI CTTAAG 1 cut(s) 833
MspI CCGG 1 cut(s) 219
MspR9I CCNGG 4 cut(s) 136, 194, 440, 1018
Mva1269I GAATGC 1 cut(s) 1277
MvaI CCWGG 4 cut(s) 136, 194, 440, 1018
MvnI CGCG 2 cut(s) 13, 671
MwoI GCNNNNNNNGC 1 cut(s) 1760
NaeI GCCGGC 1 cut(s) 220
NdeII GATC 8 cut(s) 330, 697, 1159, 1910, 1941, 2077, 2113, 2246
NgoMIV GCCGGC 1 cut(s) 218
NheI GCTAGC 2 cut(s) 623, 1093
NlaIV GGNNCC 3 cut(s) 401, 1630, 2325
NmeAIII GCCGAG 1 cut(s) 262
NmuCI GTSAC 2 cut(s) 424, 1117
NspI RCATGY 3 cut(s) 540, 643, 1249
NspV TTCGAA 1 cut(s) 161
OliI CACNNNNGTG 1 cut(s) 2036
PacI TTAATTAA 1 cut(s) 1545
PasI CCCWGGG 1 cut(s) 193
PauI GCGCGC 1 cut(s) 11
PciI ACATGT 2 cut(s) 639, 1245
PcsI WCGNNNNNNNCGW 1 cut(s) 1968
PctI GAATGC 1 cut(s) 1277
PdiI GCCGGC 1 cut(s) 220
PdmI GAANNNNTTC 1 cut(s) 509
PfeI GAWTC 4 cut(s) 665, 761, 2099, 2181
PflMI CCANNNNNTGG 1 cut(s) 1471
PfoI TCCNGGA 2 cut(s) 438, 1016
PkrI GCNGC 2 cut(s) 433, 2053
PleI GAGTC 6 cut(s) 291, 409, 694, 1214, 1418, 1585
PpsI GAGTC 6 cut(s) 291, 409, 694, 1214, 1418, 1585
Ppu21I YACGTR 1 cut(s) 1363
PscI ACATGT 2 cut(s) 639, 1245
PshBI ATTAAT 2 cut(s) 1238, 1541
Psp6I CCWGG 4 cut(s) 134, 192, 438, 1016
PspFI CCCAGC 2 cut(s) 292, 2021
PspGI CCWGG 4 cut(s) 134, 192, 438, 1016
PspN4I GGNNCC 3 cut(s) 401, 1630, 2325
PspPI GGNCC 2 cut(s) 808, 1629
PsuI RGATCY 2 cut(s) 1910, 2246
PteI GCGCGC 1 cut(s) 11
RsaI GTAC 6 cut(s) 341, 547, 916, 947, 1304, 2430
RsaNI GTAC 6 cut(s) 340, 546, 915, 946, 1303, 2429
RseI CAYNNNNRTG 2 cut(s) 582, 1524
SacII CCGCGG 1 cut(s) 672
SatI GCNGC 2 cut(s) 432, 2052
Sau3AI GATC 8 cut(s) 330, 697, 1159, 1910, 1941, 2077, 2113, 2246
Sau96I GGNCC 2 cut(s) 808, 1629
SchI GAGTC 6 cut(s) 291, 409, 695, 1215, 1419, 1586
ScrFI CCNGG 4 cut(s) 136, 194, 440, 1018
SduI GDGCHC 4 cut(s) 589, 845, 1756, 1957
SfaNI GCATC 7 cut(s) 291, 355, 1331, 1660, 1840, 2326, 2380
SfcI CTRYAG 1 cut(s) 2462
Sfr303I CCGCGG 1 cut(s) 672
SfuI TTCGAA 1 cut(s) 161
SgrBI CCGCGG 1 cut(s) 672
SinI GGWCC 2 cut(s) 808, 1629
SmiMI CAYNNNNRTG 4 cut(s) 582, 1524, 1805, 2036
SmlI CTYRAG 4 cut(s) 371, 496, 530, 833
SmoI CTYRAG 4 cut(s) 371, 496, 530, 833
SsiI CCGC 4 cut(s) 280, 669, 671, 1866
SspMI CTAG 7 cut(s) 303, 522, 624, 1094, 1254, 1908, 2196
StyD4I CCNGG 4 cut(s) 134, 192, 438, 1016
StyI CCWWGG 2 cut(s) 1168, 2228
TaaI ACNGT 4 cut(s) 158, 1302, 1964, 2286
TaiI ACGT 1 cut(s) 1365
TaqI TCGA 3 cut(s) 161, 344, 1971
TaqII GACCGA 1 cut(s) 710
TatI WGTACW 3 cut(s) 339, 945, 1302
TfiI GAWTC 4 cut(s) 665, 761, 2099, 2181
TscAI CASTG 4 cut(s) 433, 577, 1030, 2049
TseFI GTSAC 2 cut(s) 424, 1117
TseI GCWGC 2 cut(s) 431, 2051
Tsp45I GTSAC 2 cut(s) 424, 1117
TspGWI ACGGA 2 cut(s) 563, 884
TspRI CASTG 4 cut(s) 433, 577, 1030, 2049
Van91I CCANNNNNTGG 1 cut(s) 1471
Vha464I CTTAAG 1 cut(s) 833
VpaK11BI GGWCC 2 cut(s) 808, 1629
VspI ATTAAT 2 cut(s) 1238, 1541
XapI RAATTY 8 cut(s) 856, 908, 1418, 1482, 1620, 1679, 1721, 2130
XbaI TCTAGA 2 cut(s) 1253, 1907
XceI RCATGY 3 cut(s) 540, 643, 1249
XmiI GTMKAC 2 cut(s) 689, 737
XmnI GAANNNNTTC 1 cut(s) 509
XspI CTAG 7 cut(s) 303, 522, 624, 1094, 1254, 1908, 2196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.