Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0008156

Physical Location & Seq

Genomic Coordinates Reverse (-)

41005717 .. 41008413

Gene Structure 2697 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000013780

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2490 bp

ATGAGGAGCTTACGCTTATTGGGGCTTCCTCTTGCTTCAACGATTAAAACTATTAATTCTTGTACAGTTAAACCCATGCAATTCCACCTGTATCACAGTTCGAAACCCTGTTCTTCATGCTCTTATCTCTCCCTGGGTAAACAATCAACTGCCATTGCCGGCGCTCTTTCCCTCGCCGAGACTTCAAACTCATGTTTTCTTGGTCTCCAAATCCATGCCCGCATCATCAAGCTGGGACTCAGTAGCGACATTTTTTCATTGAATAACTTGATCAAAGTGTACTCGAAATGTGGGCAACTGGGTGCTGCGCTTAAGGTGTTTGATGAAATGCCTGAGAGGAACCTTGTCTCTTGGACTCTGCTCGTCACGGCTGCTGTCCGGGATGGTGAGTTTGAATTGGGATTGGAGGTTTATTCGGAATTGGTAACAACAGGTTTGAGGCCGAATGAGTTCACTGCTGCTAGTGTTCTCAAGGCATGTGCAAGTACGGAAGCGCATAAGTTTGGCATCAGTGTTCATTGTTGTGCTCTGAAACTTGGGATTGAGCAGAACCGTTTTGTCGCTAGCTCTCTTTTGAACATGTATGCTGAGTTGGAGGATGTTGAATCCGCCGAGGGGGTGTTTGAGTCCACGACCGATCTTGATACTGCTTGTTGGAATACTATGATTGGAGGGTATACGAAGTGTGGCTATGGCTTTGAATCCTTGAAGCTTGTGTCTTTAATGGTGTGCAAAGGGATAAGCATGGACCACTTCACCTTTGTTAATGCTCTTAACGGGTGCTCCTTTATGGGGAGTTTAGATTTTGGGAACCAACTACATGGATTGCTCATCCGTAGTGACATGGAATTTAGTACCTCAGTAATGAACGCTCTTACGGATATGTACTCTACACACGGGAAGAAGGATTTGGCTTTCAAAGTTTTCAGTAGGATAAGAACCAAAGACATTATATCCTGGAACACTGCATTTGGGGTCTTTTCTGACGACATAAATGCAAAAGAGCTTTTAAACTTAGTCCACAAGTTCATGCTAGCAAACATGAAGCCAAACCATGTCACTTTCTCAGTCTTGTTTAGACAATGTGGTCAGCTACTTGATCTCAACCTTGGGCTTCAGTTTTTCTGCCTTGCATTGCAATTTGGAGTCTGTAATGAAGCTATTGTCAGAAGCTCATTAATGAACATGTTTTCTAGATGTGGGGCTGTGGAGATGGCATTCTTGTTTTTTGACAGCTTACTGTACAAAAACATAACTTCTTGGAACGAGTTGATTTCTGGATGCAATTCAAACTATTACTACGTGGAAGCCATGAAGAGTTTTTACAATCTATGGCACTTGGGAGTTGGAGTCAATGAATTTACCTTGTCCATTATATTGGAAACTTGTTTTAGAGATGAACACCAACAAATGGTTAGACAAATTCATGGTGCTATTGTCAAATGTGGCTATTCATTGCATGGATATGTTTGTAGCTCATTAATTAAATGCTATGTTAAACTTGGACAACTTGATGAGTCCTTCGAGTTTTTTAATGGGTTTGAGAGATTGGATGTGGAAATTTGGGGGACCATGATATCTGCGCTGGTGCATCAGGGATATCATTTTCAAGCTATCAAATTTCTCAACTCTCTGATGGAACCTGGCAGGAAGCCTGATGAATTTATCTTGGGTAGTATTCTTAGTAGTTGTGCTCATATTGCAGGCTATCATTTAACTCATTCTGTTCATTCCATTGTCATCAAAATGGGATTTCAAAAACAAGTATTTGTGGTTAGTGCAGTTATAGATGCTTACGCAAAATGCGGGGATATCGAAAATGCAAGGATGATATTTAGCCAGTCATCTAGATCTGGTGATGTAGTTATATGTAATGCTATGATCATAGCTTGTGCTCATCACGGTCTGGTTGAGGAAGCTATGGCGGTCTTTGAGAAAATGAAGTTGGCTAATCTAAAGCCCAGCCAAGCCACATTTGTGTCAGTGTTAGCAGCTTGTAGCCACATGGGACGGGTTGATCAAGGTCGTTTGTTGTTTGAATCAATAGCCTCTGATCATAAGTTGAAACAAATTTCTCAGGATATTTATGGTTGCATGGTTGATATGCTTTCACGAAATGGATTCCTTGAAGAAGCTAGACATATAATTGAAGTAATGCCTTATACTCCTTGGCCTGCCATATTAAGATCCTTGCTTAGCGGTTGTCGGACACATGGGAACTTACAGTTGGGAGAATGGGCTGTTAAGGAGTTAGTCCAGTTGGTTCCAGAAAATGATGCACCTTATGTATTATTGTCGAAGGCTCATTCTGAAGCAGGTAGTTGGGAGGATGCTACGAAGATACGGAGGGAAATGATAGAAAGAGGCTTATTCTTTGCCACGGGGCAACCTTGTTCATTTCAGGTTTCTATTACGCATGGATTGCTGACTATGCTTATAAAGGAGACAAGGGCTTCCTTTTCTCCGACCAATCACCTGAATGGGTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 Pkinase_Tyr

Protein Analysis

830

Amino Acids

92.09

Weight (kDa)

6.49

Isoelectric Point (pI)

34.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	83 - 115	5.8e-06	PPR repeat family
PPR_2	PF13041	215 - 261	3.9e-07	PPR repeat family
PPR_2	PF13041	620 - 667	1.6e-09	PPR repeat family
PPR	PF01535	622 - 649	1.5e-06	PPR repeat
E_motif	PF20431	738 - 789	5.8e-09	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008156)

Species	Orthologous Gene IDs
malus_domestica	MD13G1237500.v1.1
prunus_persica	Prupe.1G070000_v2.0.a1 Prupe.1G070000_v2.0.a1 Prupe.1G070000_v2.0.a1 Prupe.1G070000_v2.0.a1 Prupe.1G070000_v2.0.a1 Prupe.1G070000_v2.0.a1
pyrus_communis	pycom13g21030
rosa_chinensis	RchiOBHm_Chr6g0270531
rosa_laevigata	RLG00000013780
rosa_multiflora	Rmu_sc0004171.1_g000004 Rmu_sc0004477.1_g000003 Rmu_sc0036767.1_g000001
rosa_roxburghii	Rroxscaffold_7G00197760 Rroxscaffold_7G00197840
rosa_rugosa	Rorug06G0055300 Rorug06G0055400 Rorug06G0055500
rosa_samantha	Rh6AG174500 Rh6BG177700 Rh6CG173700 Rh6DG166100
rosa_wichuraiana	Rw6G014840 Rw6G014870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2438
AasI	GACNNNNNNGTC	1 cut(s)	1086
Acc36I	ACCTGC	1 cut(s)	2306
AccB7I	CCANNNNNTGG	1 cut(s)	1411
AccI	GTMKAC	1 cut(s)	677
AciI	CCGC	5 cut(s)	220, 609, 1806, 1925, 2199
AclWI	GGATC	1 cut(s)	2181
AcsI	RAATTY	7 cut(s)	848, 1358, 1422, 1560, 1619, 1661, 2070
AcuI	CTGAAG	2 cut(s)	1100, 2331
AfaI	GTAC	6 cut(s)	64, 281, 487, 856, 887, 1244
AfiI	CCNNNNNNNGG	3 cut(s)	615, 792, 1411
AflII	CTTAAG	1 cut(s)	311
AflIII	ACRYGT	2 cut(s)	579, 1185
AjnI	CCWGG	3 cut(s)	132, 956, 1642
AjuI	GAANNNNNNNTTGG	6 cut(s)	893, 925, 1928, 1960, 2210, 2242
AleI	CACNNNNGTG	1 cut(s)	1976
Alw21I	GWGCWC	4 cut(s)	529, 785, 1696, 1897
Alw26I	GTCTC	4 cut(s)	173, 209, 352, 2438
AlwI	GGATC	1 cut(s)	2181
AoxI	GGCC	2 cut(s)	440, 2171
ApeKI	GCWGC	4 cut(s)	305, 371, 458, 1991
ApoI	RAATTY	7 cut(s)	848, 1358, 1422, 1560, 1619, 1661, 2070
AseI	ATTAAT	3 cut(s)	54, 1178, 1481
Asp700I	GAANNNNTTC	1 cut(s)	449
AspLEI	GCGC	4 cut(s)	164, 310, 496, 1585
AspS9I	GGNCC	2 cut(s)	748, 1569
AsuC2I	CCSGG	1 cut(s)	380
AsuHPI	GGTGA	4 cut(s)	398, 748, 1868, 2465
AsuII	TTCGAA	1 cut(s)	101
AsuNHI	GCTAGC	2 cut(s)	563, 1033
AvaII	GGWCC	2 cut(s)	748, 1569
BarI	GAAGNNNNNNTAC	2 cut(s)	1307, 1339
Bbv12I	GWGCWC	4 cut(s)	529, 785, 1696, 1897
BbvI	GCAGC	4 cut(s)	292, 358, 445, 2003
BccI	CCATC	3 cut(s)	377, 1207, 1630
BceAI	ACGGC	1 cut(s)	384
BcgI	CGANNNNNNTGC	2 cut(s)	977, 1011
BciT130I	CCWGG	3 cut(s)	134, 958, 1644
BclI	TGATCA	4 cut(s)	270, 1881, 2017, 2053
BcnI	CCSGG	1 cut(s)	380
BcoDI	GTCTC	4 cut(s)	173, 209, 352, 2438
BfaI	CTAG	6 cut(s)	462, 564, 1034, 1194, 1848, 2136
BfoI	RGCGCY	1 cut(s)	165
BfrI	CTTAAG	1 cut(s)	311
BfuAI	ACCTGC	1 cut(s)	2306
BglII	AGATCT	1 cut(s)	1850
BisI	GCNGC	4 cut(s)	306, 372, 459, 1992
BlpI	GCTNAGC	1 cut(s)	2195
BlsI	GCNGC	4 cut(s)	307, 373, 460, 1993
Bme1390I	CCNGG	4 cut(s)	134, 380, 958, 1644
Bme18I	GGWCC	2 cut(s)	748, 1569
BmgT120I	GGNCC	2 cut(s)	748, 1569
BmiI	GGNNCC	5 cut(s)	341, 812, 1570, 1641, 2265
BmrFI	CCNGG	4 cut(s)	134, 380, 958, 1644
BmrI	ACTGGG	1 cut(s)	308
BmsI	GCATC	7 cut(s)	231, 516, 1271, 1600, 1780, 2266, 2320
BmtI	GCTAGC	2 cut(s)	567, 1037
BmuI	ACTGGG	1 cut(s)	308
Bpu1102I	GCTNAGC	1 cut(s)	2195
Bpu14I	TTCGAA	1 cut(s)	101
BpuEI	CTTGAG	1 cut(s)	455
BpuMI	CCSGG	1 cut(s)	380
BsaAI	YACGTR	1 cut(s)	1303
BsaI	GGTCTC	1 cut(s)	209
BsaJI	CCNNGG	6 cut(s)	132, 133, 612, 1108, 2168, 2379
BsaXI	ACNNNNNCTCC	4 cut(s)	767, 797, 1335, 1365
Bsc4I	CCNNNNNNNGG	3 cut(s)	615, 792, 1411
Bse118I	RCCGGY	1 cut(s)	158
Bse1I	ACTGG	3 cut(s)	303, 1840, 2257
Bse3DI	GCAATG	3 cut(s)	153, 1133, 1454
BseBI	CCWGG	3 cut(s)	134, 958, 1644
BseDI	CCNNGG	6 cut(s)	132, 133, 612, 1108, 2168, 2379
BseGI	GGATG	7 cut(s)	388, 604, 831, 1286, 1558, 1833, 2335
BseLI	CCNNNNNNNGG	3 cut(s)	615, 792, 1411
BseMI	GCAATG	3 cut(s)	153, 1133, 1454
BseMII	CTCAG	6 cut(s)	253, 324, 579, 873, 1080, 2090
BseNI	ACTGG	3 cut(s)	303, 1840, 2257
BseRI	GAGGAG	1 cut(s)	19
BseXI	GCAGC	4 cut(s)	292, 358, 445, 2003
BseYI	CCCAGC	2 cut(s)	232, 1961
BsgI	GTGCAG	1 cut(s)	1800
Bsh1285I	CGRYCG	1 cut(s)	636
BshFI	GGCC	2 cut(s)	442, 2173
BsiEI	CGRYCG	1 cut(s)	636
BsiHKAI	GWGCWC	4 cut(s)	529, 785, 1696, 1897
BsiSI	CCGG	2 cut(s)	159, 379
BslFI	GGGAC	3 cut(s)	249, 1582, 2022
BslI	CCNNNNNNNGG	3 cut(s)	615, 792, 1411
BsmAI	GTCTC	4 cut(s)	173, 209, 352, 2438
BsmFI	GGGAC	3 cut(s)	249, 1582, 2022
BsmI	GAATGC	1 cut(s)	1217
BsnI	GGCC	2 cut(s)	442, 2173
Bso31I	GGTCTC	1 cut(s)	209
Bsp119I	TTCGAA	1 cut(s)	101
Bsp1286I	GDGCHC	4 cut(s)	529, 785, 1696, 1897
Bsp1407I	TGTACA	2 cut(s)	62, 1242
Bsp143I	GATC	8 cut(s)	270, 637, 1099, 1850, 1881, 2017, 2053, 2186
Bsp1720I	GCTNAGC	1 cut(s)	2195
BspACI	CCGC	5 cut(s)	220, 609, 1806, 1925, 2199
BspANI	GGCC	2 cut(s)	442, 2173
BspCNI	CTCAG	6 cut(s)	252, 325, 580, 872, 1079, 2089
BspLI	GGNNCC	5 cut(s)	341, 812, 1570, 1641, 2265
BspMI	ACCTGC	1 cut(s)	2306
BspOI	GCTAGC	2 cut(s)	567, 1037
BspPI	GGATC	1 cut(s)	2181
BspT104I	TTCGAA	1 cut(s)	101
BspTI	CTTAAG	1 cut(s)	311
BspTNI	GGTCTC	1 cut(s)	209
BsrDI	GCAATG	3 cut(s)	153, 1133, 1454
BsrFI	RCCGGY	1 cut(s)	158
BsrGI	TGTACA	2 cut(s)	62, 1242
BsrI	ACTGG	3 cut(s)	303, 1840, 2257
BssAI	RCCGGY	1 cut(s)	158
BssECI	CCNNGG	6 cut(s)	132, 133, 612, 1108, 2168, 2379
BssMI	GATC	8 cut(s)	270, 637, 1099, 1850, 1881, 2017, 2053, 2186
BssNAI	GTATAC	1 cut(s)	678
BssT1I	CCWWGG	2 cut(s)	1108, 2168
Bst1107I	GTATAC	1 cut(s)	678
Bst2UI	CCWGG	3 cut(s)	134, 958, 1644
Bst4CI	ACNGT	6 cut(s)	67, 98, 554, 1242, 1904, 2226
Bst6I	CTCTTC	1 cut(s)	1310
BstAFI	CTTAAG	1 cut(s)	311
BstAPI	GCANNNNNTGC	1 cut(s)	2422
BstAUI	TGTACA	2 cut(s)	62, 1242
BstBAI	YACGTR	1 cut(s)	1303
BstBI	TTCGAA	1 cut(s)	101
BstC8I	GCNNGC	6 cut(s)	160, 220, 565, 1035, 1705, 2175
BstDEI	CTNAG	9 cut(s)	239, 333, 588, 859, 1015, 1066, 1682, 2076, 2195
BstDSI	CCRYGG	1 cut(s)	2379
BstF5I	GGATG	7 cut(s)	388, 604, 831, 1286, 1558, 1833, 2335
BstH2I	RGCGCY	1 cut(s)	165
BstHHI	GCGC	4 cut(s)	164, 310, 496, 1585
BstKTI	GATC	8 cut(s)	273, 640, 1102, 1853, 1884, 2020, 2056, 2189
BstMAI	GTCTC	4 cut(s)	173, 209, 352, 2438
BstMBI	GATC	8 cut(s)	270, 637, 1099, 1850, 1881, 2017, 2053, 2186
BstMCI	CGRYCG	1 cut(s)	636
BstMWI	GCNNNNNNNGC	3 cut(s)	1700, 2422, 2431
BstNI	CCWGG	3 cut(s)	134, 958, 1644
BstNSI	RCATGY	3 cut(s)	480, 583, 1189
BstSCI	CCNGG	4 cut(s)	132, 378, 956, 1642
BstV1I	GCAGC	4 cut(s)	292, 358, 445, 2003
BstX2I	RGATCY	2 cut(s)	1850, 2186
BstXI	CCANNNNNNTGG	2 cut(s)	821, 1378
BstYI	RGATCY	2 cut(s)	1850, 2186
BstZ17I	GTATAC	1 cut(s)	678
BsuRI	GGCC	2 cut(s)	442, 2173
BtgI	CCRYGG	1 cut(s)	2379
BtsCI	GGATG	7 cut(s)	388, 604, 831, 1286, 1558, 1833, 2335
BtsI	GCAGTG	2 cut(s)	453, 963
BtsIMutI	CAGTG	4 cut(s)	453, 517, 963, 1989
BveI	ACCTGC	1 cut(s)	2306
Cac8I	GCNNGC	6 cut(s)	160, 220, 565, 1035, 1705, 2175
CfoI	GCGC	4 cut(s)	164, 310, 496, 1585
Cfr10I	RCCGGY	1 cut(s)	158
Cfr13I	GGNCC	2 cut(s)	748, 1569
Csp6I	GTAC	6 cut(s)	63, 280, 486, 855, 886, 1243
CviQI	GTAC	6 cut(s)	63, 280, 486, 855, 886, 1243
DdeI	CTNAG	9 cut(s)	239, 333, 588, 859, 1015, 1066, 1682, 2076, 2195
DpnI	GATC	8 cut(s)	272, 639, 1101, 1852, 1883, 2019, 2055, 2188
DpnII	GATC	8 cut(s)	270, 637, 1099, 1850, 1881, 2017, 2053, 2186
DraI	TTTAAA	1 cut(s)	1011
DrdI	GACNNNNNNGTC	1 cut(s)	1086
DseDI	GACNNNNNNGTC	1 cut(s)	1086
Eam1104I	CTCTTC	1 cut(s)	1310
EarI	CTCTTC	1 cut(s)	1310
EciI	GGCGGA	1 cut(s)	598
Eco130I	CCWWGG	2 cut(s)	1108, 2168
Eco31I	GGTCTC	1 cut(s)	209
Eco32I	GATATC	3 cut(s)	1578, 1601, 1813
Eco47I	GGWCC	2 cut(s)	748, 1569
Eco57I	CTGAAG	2 cut(s)	1100, 2331
EcoRII	CCWGG	3 cut(s)	132, 956, 1642
EcoRV	GATATC	3 cut(s)	1578, 1601, 1813
EcoT14I	CCWWGG	2 cut(s)	1108, 2168
ErhI	CCWWGG	2 cut(s)	1108, 2168
FaqI	GGGAC	3 cut(s)	249, 1582, 2022
FauI	CCCGC	2 cut(s)	227, 1799
FbaI	TGATCA	4 cut(s)	270, 1881, 2017, 2053
FblI	GTMKAC	1 cut(s)	677
Fnu4HI	GCNGC	4 cut(s)	306, 372, 459, 1992
FokI	GGATG	7 cut(s)	395, 611, 818, 1293, 1565, 1840, 2342
Fsp4HI	GCNGC	4 cut(s)	306, 372, 459, 1992
FspBI	CTAG	6 cut(s)	462, 564, 1034, 1194, 1848, 2136
GlaI	GCGC	4 cut(s)	163, 309, 495, 1584
GluI	GCNGC	4 cut(s)	306, 372, 459, 1992
GsaI	CCCAGC	2 cut(s)	236, 1965
HaeII	RGCGCY	1 cut(s)	165
HaeIII	GGCC	2 cut(s)	442, 2173
HapII	CCGG	2 cut(s)	159, 379
HhaI	GCGC	4 cut(s)	164, 310, 496, 1585
Hin6I	GCGC	4 cut(s)	162, 308, 494, 1583
HinP1I	GCGC	4 cut(s)	162, 308, 494, 1583
HindIII	AAGCTT	1 cut(s)	710
HpaII	CCGG	2 cut(s)	159, 379
HphI	GGTGA	4 cut(s)	398, 748, 1868, 2465
Hpy166II	GTNNAC	6 cut(s)	140, 280, 453, 630, 678, 1021
Hpy188I	TCNGA	9 cut(s)	418, 531, 985, 1169, 1635, 2053, 2208, 2311, 2466
Hpy188III	TCNNGA	7 cut(s)	641, 1194, 1278, 1848, 2078, 2112, 2267
Hpy8I	GTNNAC	6 cut(s)	140, 280, 453, 630, 678, 1021
HpyAV	CCTTC	3 cut(s)	898, 1531, 2293
HpyCH4III	ACNGT	6 cut(s)	67, 98, 554, 1242, 1904, 2226
HpyCH4IV	ACGT	1 cut(s)	1302
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1700, 2422, 2431
HpyF3I	CTNAG	9 cut(s)	239, 333, 588, 859, 1015, 1066, 1682, 2076, 2195
HpySE526I	ACGT	1 cut(s)	1302
HspAI	GCGC	4 cut(s)	162, 308, 494, 1583
KroI	GCCGGC	1 cut(s)	158
KroNI	GCCGGC	1 cut(s)	160
Ksp22I	TGATCA	4 cut(s)	270, 1881, 2017, 2053
Kzo9I	GATC	8 cut(s)	270, 637, 1099, 1850, 1881, 2017, 2053, 2186
LmnI	GCTCC	2 cut(s)	6, 788
Lsp1109I	GCAGC	4 cut(s)	292, 358, 445, 2003
LweI	GCATC	7 cut(s)	231, 516, 1271, 1600, 1780, 2266, 2320
MaeI	CTAG	6 cut(s)	462, 564, 1034, 1194, 1848, 2136
MaeII	ACGT	1 cut(s)	1302
MaeIII	GTNAC	4 cut(s)	364, 424, 839, 1057
MalI	GATC	8 cut(s)	272, 639, 1101, 1852, 1883, 2019, 2055, 2188
MboI	GATC	8 cut(s)	270, 637, 1099, 1850, 1881, 2017, 2053, 2186
MboII	GAAGA	5 cut(s)	105, 913, 1327, 2141, 2350
MflI	RGATCY	2 cut(s)	1850, 2186
MhlI	GDGCHC	4 cut(s)	529, 785, 1696, 1897
MlyI	GAGTC	6 cut(s)	231, 349, 635, 1155, 1359, 1526
MmeI	TCCRAC	5 cut(s)	573, 635, 1327, 2186, 2489
MroNI	GCCGGC	1 cut(s)	158
MroXI	GAANNNNTTC	1 cut(s)	449
MslI	CAYNNNNRTG	5 cut(s)	522, 1464, 1745, 1976, 2478
MspCI	CTTAAG	1 cut(s)	311
MspI	CCGG	2 cut(s)	159, 379
MspR9I	CCNGG	4 cut(s)	134, 380, 958, 1644
Mva1269I	GAATGC	1 cut(s)	1217
MvaI	CCWGG	3 cut(s)	134, 958, 1644
MwoI	GCNNNNNNNGC	3 cut(s)	1700, 2422, 2431
NaeI	GCCGGC	1 cut(s)	160
NciI	CCSGG	1 cut(s)	380
NdeII	GATC	8 cut(s)	270, 637, 1099, 1850, 1881, 2017, 2053, 2186
NgoMIV	GCCGGC	1 cut(s)	158
NheI	GCTAGC	2 cut(s)	563, 1033
NlaIV	GGNNCC	5 cut(s)	341, 812, 1570, 1641, 2265
NmeAIII	GCCGAG	2 cut(s)	202, 637
NmuCI	GTSAC	3 cut(s)	364, 839, 1057
NspI	RCATGY	3 cut(s)	480, 583, 1189
NspV	TTCGAA	1 cut(s)	101
OliI	CACNNNNGTG	1 cut(s)	1976
PacI	TTAATTAA	1 cut(s)	1485
PasI	CCCWGGG	1 cut(s)	133
PciI	ACATGT	2 cut(s)	579, 1185
PctI	GAATGC	1 cut(s)	1217
PdiI	GCCGGC	1 cut(s)	160
PdmI	GAANNNNTTC	1 cut(s)	449
PfeI	GAWTC	4 cut(s)	605, 701, 2039, 2121
PflMI	CCANNNNNTGG	1 cut(s)	1411
PfoI	TCCNGGA	2 cut(s)	378, 956
PkrI	GCNGC	4 cut(s)	307, 373, 460, 1993
PleI	GAGTC	6 cut(s)	231, 349, 634, 1154, 1358, 1525
PpsI	GAGTC	6 cut(s)	231, 349, 634, 1154, 1358, 1525
Ppu21I	YACGTR	1 cut(s)	1303
PscI	ACATGT	2 cut(s)	579, 1185
PshBI	ATTAAT	3 cut(s)	54, 1178, 1481
PsiI	TTATAA	1 cut(s)	2438
Psp6I	CCWGG	3 cut(s)	132, 956, 1642
PspFI	CCCAGC	2 cut(s)	232, 1961
PspGI	CCWGG	3 cut(s)	132, 956, 1642
PspN4I	GGNNCC	5 cut(s)	341, 812, 1570, 1641, 2265
PspPI	GGNCC	2 cut(s)	748, 1569
PsuI	RGATCY	2 cut(s)	1850, 2186
RsaI	GTAC	6 cut(s)	64, 281, 487, 856, 887, 1244
RsaNI	GTAC	6 cut(s)	63, 280, 486, 855, 886, 1243
RseI	CAYNNNNRTG	5 cut(s)	522, 1464, 1745, 1976, 2478
SatI	GCNGC	4 cut(s)	306, 372, 459, 1992
Sau3AI	GATC	8 cut(s)	270, 637, 1099, 1850, 1881, 2017, 2053, 2186
Sau96I	GGNCC	2 cut(s)	748, 1569
SchI	GAGTC	6 cut(s)	231, 349, 635, 1155, 1359, 1526
ScrFI	CCNGG	4 cut(s)	134, 380, 958, 1644
SduI	GDGCHC	4 cut(s)	529, 785, 1696, 1897
SfaNI	GCATC	7 cut(s)	231, 516, 1271, 1600, 1780, 2266, 2320
SfuI	TTCGAA	1 cut(s)	101
SinI	GGWCC	2 cut(s)	748, 1569
SmiMI	CAYNNNNRTG	5 cut(s)	522, 1464, 1745, 1976, 2478
SmlI	CTYRAG	2 cut(s)	311, 470
SmoI	CTYRAG	2 cut(s)	311, 470
SsiI	CCGC	5 cut(s)	220, 609, 1806, 1925, 2199
SspMI	CTAG	6 cut(s)	462, 564, 1034, 1194, 1848, 2136
StyD4I	CCNGG	4 cut(s)	132, 378, 956, 1642
StyI	CCWWGG	2 cut(s)	1108, 2168
TaaI	ACNGT	6 cut(s)	67, 98, 554, 1242, 1904, 2226
TaiI	ACGT	1 cut(s)	1305
TaqI	TCGA	5 cut(s)	101, 284, 1524, 1815, 2297
TaqII	GACCGA	1 cut(s)	650
TatI	WGTACW	4 cut(s)	62, 279, 885, 1242
TfiI	GAWTC	4 cut(s)	605, 701, 2039, 2121
TscAI	CASTG	4 cut(s)	460, 517, 970, 1989
TseFI	GTSAC	3 cut(s)	364, 839, 1057
TseI	GCWGC	4 cut(s)	305, 371, 458, 1991
Tsp45I	GTSAC	3 cut(s)	364, 839, 1057
TspGWI	ACGGA	4 cut(s)	503, 824, 893, 2359
TspRI	CASTG	4 cut(s)	460, 517, 970, 1989
Van91I	CCANNNNNTGG	1 cut(s)	1411
Vha464I	CTTAAG	1 cut(s)	311
VpaK11BI	GGWCC	2 cut(s)	748, 1569
VspI	ATTAAT	3 cut(s)	54, 1178, 1481
XapI	RAATTY	7 cut(s)	848, 1358, 1422, 1560, 1619, 1661, 2070
XbaI	TCTAGA	2 cut(s)	1193, 1847
XceI	RCATGY	3 cut(s)	480, 583, 1189
XmiI	GTMKAC	1 cut(s)	677
XmnI	GAANNNNTTC	1 cut(s)	449
XspI	CTAG	6 cut(s)	462, 564, 1034, 1194, 1848, 2136

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.