Rh6CG173700

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0008156
Physical Location & Seq
Forward (+)
24420773 .. 24426411
5639 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG173700.1

Sequence Viewer

Length: 2484 bp
ATGGCAAATATAAATGGTATTGGCGCGCACAAGAGGGCATTTGGAATTGGAATGGAAGAGATAGGGCGGAGGAGGGTAATGAGGAGCTTACGCTTATTGGGGCTTCCTCTTGCTTCAACGATTAAAACTATTATTCCTTGTAAAGTTAAACCCAGGCAATTCCACCTGTATCACAGTTCGAAACCCTGTTCTTCATGCTCTTATCTCTCCCTGGGTAAAGACTCAACTGCCATTGCCGGCGCTCTTTCCCTCGCCGAGACTTCAAACTCCTGTTTTCTTGGTCTCCAAATCCATGCCCGCGTCATCAAGCTGGGACTCACTAGCGACATTTTTTCATTGAATAACTTGATCAAAATGTACTCGAAATGTGGGCAACTGGGTGATGCGCTCAAGGTGTTTGATGAAATGCCTGAGAGGAACCTTGTCTCTTGGACTCTGCTCGTCACTGCTGCTGTCCAGGATGGTGAGTTTGAATTGGGATTGGAGGTTTATTCGGAATTGGTAACAACGGGCTTGAGGCCGAATGAGTTCTCTGTTGCTAGTGTTCTCAAGGCATGTGCAAGTACGGAAGCGCATAAGTTTGGCGTCAGTGTTCATTGTTGTGCTCTGAAACTTGCGATTGAGCAGAACCGTTTTGTCGCTAGCTCTCTTTTGAACATGTATGCTGAGTTGGAGGATGTTGAATCCGCCGAGGGGGTGTTTGAGTCTACGACCGATCTTGATACTGCTTGTTGGAATACTATGATTGGAGGGTATACGAAGTGTGGCTATGGCTTTGAATCCTTGAAGCTTGTGTCTTTAATGGTGTGCACAGGGATAAGCATGGACCACTTCACCTTTGTTAATGCTCTTAAGGGGTGCTCCTCTATGGGGAATTTAGATTTTGGGAAGCAACTTCATGGATTGCTCATCCGTAGTGAGATGGAATTTAGTACCTCAGTAATGAACGCTCTTATGGATATGTACTCTACACACGGGAAGAAGGATTTGGCTTTCAAAGTTTTCAATAGGATAAAAACCAAAGACATAATATCCTGGAACACTGCATTTGGGATCTTTTCTGACGACATAAATGCAAAAGAGCTTTTAAACTTAGTCCATGAGTTCATGCTAGCAAACATGAAGCCAAACCATGTCACTTTCTCAGTCTTGTTTAGACAATGTGGTCAGCTACTTGATCTCAACCTTGGGCTTCAGTTTTTCTGCCTTGCATTGCAATTTGGAGTCTGTAATGAAGCTATGGTCAGAACCTCATTAATAAACATGTTTTCTAGATGTGGGGCTGTGGAGATGGCATTCTTGTTTTTTGACAGCTTACTGTACAAAAGCATAACTTCTTGGAACGAGTTGATTTCTGGATGCAATTCAAACTATTACTACGTGGAAGCCATGAAGAGTTTTTACAAGCTATGGCACTTGGGAGTTGAAGTCAATGAATTTACCTTGTCCATTATATTGGAAACTTGTTTTAGAGATGAACACCAACAAATGGTTAGACAAATTCATGGTGCTATTGTCAAGTCTGGCTATTCATTGCATGGATATGTGTGTAGCTCATTAATTAAATGCTATGTTAAACTTGGACAACTTGATGAGTCCTTCAAGTTTTTTAATGGGTTTGAGAGATTAGATGTGGAAATTTGGGGGACCATGATATCTGCGCTGGTGCATCACGGATATCATTTTCAAGCTATCAAATTTCTCAACTCTCTGATGGAAGCTGGCAGGAAGCCTGATGAATTTATCTTGGGTAGTATTCTAAGTAGTTGTGCTCATATTGCAGGCTATCATTTAACTCATTCTGTTCATTCCATTGTCATCAAAATGGGATTTCAAAAACAAGTATTTGTGGTTAGTGCAGTTATAGATGCTTACGCAAAATGCGGGGATATTGAAAATGCAAGGATGATATTTAGCCAGTCATCTAGATCTGGTGATGTAGTTATATGTAACGCTATGATCATAGCTTGTGCTCATCACGGTCTGGTCGAGGAAGCTATGGCGATCTTTGAGAAAATGAAGTTGGCTAATCTAAAGCCCAGCCAAGCCACATTTGTGTCAGTGTTAGCAGCTTGTAGCCACATGGGATGGGTTGATCAAGGTCGTTTGTTGTTTGAATCAATAGCCTCTGATCATAAGTTGAAACAAATTTCTCAGGATATTTATGGTTGCATGGTTGATATGCTTTCACGAAATGGATTCCTTGAAGAAGCTAGACAAATAATTGAAGTAGTGCCGTATACTCCTTGGCCTGCCATATTAAGATCCTTGCTTAGCGGTTGTCGGACGCATGGGAACTTACAGTTGGGAGAATGGGCTGTTAAGGAGTTAGTCCAGTTGGTTCCAGAAAATGATGCACCTTATGTATTATTGTCAAAGGCTCATTCTGAAGCAGGTAGTTGGGAGGATGCTACAAAGATAAGGAGGGAAATGATAGAAAGAGGTGTACAAAAAAATACAGGATATAGTTGGATTGAGCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 Pkinase_Tyr

Protein Analysis

827

Amino Acids

92.19

Weight (kDa)

6.55

Isoelectric Point (pI)

35.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 109 - 141 3.1e-06 PPR repeat family
PPR PF01535 112 - 140 5.6e-06 PPR repeat
PPR_2 PF13041 241 - 288 2.1e-06 PPR repeat family
PPR_2 PF13041 646 - 693 2.5e-09 PPR repeat family
PPR PF01535 648 - 675 1.9e-06 PPR repeat
E_motif PF20431 764 - 826 1.6e-13 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1164
Acc36I ACCTGC 1 cut(s) 2384
AccB7I CCANNNNNTGG 1 cut(s) 1489
AccI GTMKAC 3 cut(s) 707, 755, 2240
AccII CGCG 2 cut(s) 26, 300
AciI CCGC 5 cut(s) 67, 298, 687, 1884, 2277
AclWI GGATC 2 cut(s) 1061, 2259
AcsI RAATTY 8 cut(s) 874, 926, 1436, 1500, 1638, 1697, 1739, 2148
AcuI CTGAAG 2 cut(s) 1178, 2409
AcyI GRCGYC 1 cut(s) 585
AfaI GTAC 6 cut(s) 359, 565, 934, 965, 1322, 2448
AfiI CCNNNNNNNGG 3 cut(s) 693, 870, 1489
AflII CTTAAG 1 cut(s) 851
AflIII ACRYGT 2 cut(s) 657, 1263
AjnI CCWGG 4 cut(s) 152, 210, 456, 1034
AjuI GAANNNNNNNTTGG 6 cut(s) 971, 1003, 2006, 2038, 2288, 2320
AleI CACNNNNGTG 1 cut(s) 2054
Alw21I GWGCWC 5 cut(s) 607, 812, 863, 1774, 1975
Alw26I GTCTC 3 cut(s) 251, 287, 430
Alw44I GTGCAC 1 cut(s) 808
AlwI GGATC 2 cut(s) 1061, 2259
AoxI GGCC 2 cut(s) 518, 2249
ApaLI GTGCAC 1 cut(s) 808
ApeKI GCWGC 2 cut(s) 449, 2069
ApoI RAATTY 8 cut(s) 874, 926, 1436, 1500, 1638, 1697, 1739, 2148
AseI ATTAAT 2 cut(s) 1256, 1559
Asp700I GAANNNNTTC 1 cut(s) 527
AspLEI GCGC 6 cut(s) 26, 28, 242, 388, 574, 1663
AspS9I GGNCC 2 cut(s) 826, 1647
AsuHPI GGTGA 4 cut(s) 392, 476, 826, 1946
AsuII TTCGAA 1 cut(s) 179
AsuNHI GCTAGC 2 cut(s) 641, 1111
AvaII GGWCC 2 cut(s) 826, 1647
BaeGI GKGCMC 1 cut(s) 812
BarI GAAGNNNNNNTAC 2 cut(s) 1385, 1417
Bbv12I GWGCWC 5 cut(s) 607, 812, 863, 1774, 1975
BbvI GCAGC 2 cut(s) 436, 2081
BccI CCATC 5 cut(s) 455, 916, 1285, 1708, 2082
BceAI ACGGC 1 cut(s) 2221
BcgI CGANNNNNNTGC 2 cut(s) 1055, 1089
BciT130I CCWGG 4 cut(s) 154, 212, 458, 1036
BclI TGATCA 4 cut(s) 348, 1959, 2095, 2131
BcoDI GTCTC 3 cut(s) 251, 287, 430
BfaI CTAG 7 cut(s) 321, 540, 642, 1112, 1272, 1926, 2214
BfmI CTRYAG 1 cut(s) 2480
BfoI RGCGCY 1 cut(s) 243
BfrI CTTAAG 1 cut(s) 851
BfuAI ACCTGC 1 cut(s) 2384
BglII AGATCT 1 cut(s) 1928
BisI GCNGC 2 cut(s) 450, 2070
BlpI GCTNAGC 1 cut(s) 2273
BlsI GCNGC 2 cut(s) 451, 2071
Bme1390I CCNGG 4 cut(s) 154, 212, 458, 1036
Bme18I GGWCC 2 cut(s) 826, 1647
BmgT120I GGNCC 2 cut(s) 826, 1647
BmiI GGNNCC 3 cut(s) 419, 1648, 2343
BmrFI CCNGG 4 cut(s) 154, 212, 458, 1036
BmrI ACTGGG 1 cut(s) 386
BmsI GCATC 6 cut(s) 373, 1349, 1678, 1858, 2344, 2398
BmtI GCTAGC 2 cut(s) 645, 1115
BmuI ACTGGG 1 cut(s) 386
Bpu1102I GCTNAGC 1 cut(s) 2273
Bpu14I TTCGAA 1 cut(s) 179
BpuEI CTTGAG 3 cut(s) 374, 533, 535
BsaAI YACGTR 1 cut(s) 1381
BsaHI GRCGYC 1 cut(s) 585
BsaI GGTCTC 1 cut(s) 287
BsaJI CCNNGG 6 cut(s) 152, 210, 211, 690, 1186, 2246
BsaXI ACNNNNNCTCC 2 cut(s) 1413, 1443
Bsc4I CCNNNNNNNGG 3 cut(s) 693, 870, 1489
Bse118I RCCGGY 1 cut(s) 236
Bse1I ACTGG 3 cut(s) 381, 1918, 2335
Bse3DI GCAATG 3 cut(s) 231, 1211, 1532
BseBI CCWGG 4 cut(s) 154, 212, 458, 1036
BseDI CCNNGG 6 cut(s) 152, 210, 211, 690, 1186, 2246
BseGI GGATG 7 cut(s) 466, 682, 909, 1364, 1911, 2093, 2413
BseLI CCNNNNNNNGG 3 cut(s) 693, 870, 1489
BseMI GCAATG 3 cut(s) 231, 1211, 1532
BseMII CTCAG 5 cut(s) 402, 657, 951, 1158, 2168
BseNI ACTGG 3 cut(s) 381, 1918, 2335
BsePI GCGCGC 1 cut(s) 24
BseRI GAGGAG 3 cut(s) 85, 97, 853
BseSI GKGCMC 1 cut(s) 812
BseXI GCAGC 2 cut(s) 436, 2081
BseYI CCCAGC 2 cut(s) 310, 2039
BsgI GTGCAG 1 cut(s) 1878
Bsh1236I CGCG 2 cut(s) 26, 300
Bsh1285I CGRYCG 1 cut(s) 714
BshFI GGCC 2 cut(s) 520, 2251
BsiEI CGRYCG 1 cut(s) 714
BsiHKAI GWGCWC 5 cut(s) 607, 812, 863, 1774, 1975
BsiSI CCGG 1 cut(s) 237
BslFI GGGAC 2 cut(s) 327, 1660
BslI CCNNNNNNNGG 3 cut(s) 693, 870, 1489
BsmAI GTCTC 3 cut(s) 251, 287, 430
BsmFI GGGAC 2 cut(s) 327, 1660
BsmI GAATGC 1 cut(s) 1295
BsnI GGCC 2 cut(s) 520, 2251
Bso31I GGTCTC 1 cut(s) 287
Bsp119I TTCGAA 1 cut(s) 179
Bsp1286I GDGCHC 5 cut(s) 607, 812, 863, 1774, 1975
Bsp1407I TGTACA 2 cut(s) 1320, 2446
Bsp1720I GCTNAGC 1 cut(s) 2273
BspACI CCGC 5 cut(s) 67, 298, 687, 1884, 2277
BspANI GGCC 2 cut(s) 520, 2251
BspCNI CTCAG 5 cut(s) 403, 658, 950, 1157, 2167
BspFNI CGCG 2 cut(s) 26, 300
BspLI GGNNCC 3 cut(s) 419, 1648, 2343
BspMI ACCTGC 1 cut(s) 2384
BspOI GCTAGC 2 cut(s) 645, 1115
BspPI GGATC 2 cut(s) 1061, 2259
BspT104I TTCGAA 1 cut(s) 179
BspTI CTTAAG 1 cut(s) 851
BspTNI GGTCTC 1 cut(s) 287
BsrDI GCAATG 3 cut(s) 231, 1211, 1532
BsrFI RCCGGY 1 cut(s) 236
BsrGI TGTACA 2 cut(s) 1320, 2446
BsrI ACTGG 3 cut(s) 381, 1918, 2335
BssAI RCCGGY 1 cut(s) 236
BssECI CCNNGG 6 cut(s) 152, 210, 211, 690, 1186, 2246
BssHII GCGCGC 1 cut(s) 24
BssNAI GTATAC 2 cut(s) 756, 2241
BssNI GRCGYC 1 cut(s) 585
BssT1I CCWWGG 2 cut(s) 1186, 2246
Bst1107I GTATAC 2 cut(s) 756, 2241
Bst2UI CCWGG 4 cut(s) 154, 212, 458, 1036
Bst4CI ACNGT 5 cut(s) 176, 632, 1320, 1982, 2304
Bst6I CTCTTC 2 cut(s) 51, 1388
BstACI GRCGYC 1 cut(s) 585
BstAFI CTTAAG 1 cut(s) 851
BstAUI TGTACA 2 cut(s) 1320, 2446
BstBAI YACGTR 1 cut(s) 1381
BstBI TTCGAA 1 cut(s) 179
BstC8I GCNNGC 8 cut(s) 26, 238, 298, 643, 1113, 1723, 1783, 2253
BstDEI CTNAG 8 cut(s) 411, 666, 937, 1093, 1144, 1760, 2154, 2273
BstF5I GGATG 7 cut(s) 466, 682, 909, 1364, 1911, 2093, 2413
BstFNI CGCG 2 cut(s) 26, 300
BstH2I RGCGCY 1 cut(s) 243
BstHHI GCGC 6 cut(s) 26, 28, 242, 388, 574, 1663
BstMAI GTCTC 3 cut(s) 251, 287, 430
BstMCI CGRYCG 1 cut(s) 714
BstMWI GCNNNNNNNGC 1 cut(s) 1778
BstNI CCWGG 4 cut(s) 154, 212, 458, 1036
BstNSI RCATGY 3 cut(s) 558, 661, 1267
BstSCI CCNGG 4 cut(s) 152, 210, 456, 1034
BstSFI CTRYAG 1 cut(s) 2480
BstSLI GKGCMC 1 cut(s) 812
BstUI CGCG 2 cut(s) 26, 300
BstV1I GCAGC 2 cut(s) 436, 2081
BstX2I RGATCY 3 cut(s) 1053, 1928, 2264
BstXI CCANNNNNNTGG 1 cut(s) 1456
BstYI RGATCY 3 cut(s) 1053, 1928, 2264
BstZ17I GTATAC 2 cut(s) 756, 2241
BsuRI GGCC 2 cut(s) 520, 2251
BtsCI GGATG 7 cut(s) 466, 682, 909, 1364, 1911, 2093, 2413
BtsI GCAGTG 2 cut(s) 444, 1041
BtsIMutI CAGTG 4 cut(s) 444, 595, 1041, 2067
BveI ACCTGC 1 cut(s) 2384
Cac8I GCNNGC 8 cut(s) 26, 238, 298, 643, 1113, 1723, 1783, 2253
CfoI GCGC 6 cut(s) 26, 28, 242, 388, 574, 1663
Cfr10I RCCGGY 1 cut(s) 236
Cfr13I GGNCC 2 cut(s) 826, 1647
CseI GACGC 3 cut(s) 289, 574, 2296
Csp6I GTAC 6 cut(s) 358, 564, 933, 964, 1321, 2447
CviQI GTAC 6 cut(s) 358, 564, 933, 964, 1321, 2447
DdeI CTNAG 8 cut(s) 411, 666, 937, 1093, 1144, 1760, 2154, 2273
DraI TTTAAA 1 cut(s) 1089
DrdI GACNNNNNNGTC 1 cut(s) 1164
DseDI GACNNNNNNGTC 1 cut(s) 1164
Eam1104I CTCTTC 2 cut(s) 51, 1388
EarI CTCTTC 2 cut(s) 51, 1388
EciI GGCGGA 2 cut(s) 82, 676
Eco130I CCWWGG 2 cut(s) 1186, 2246
Eco31I GGTCTC 1 cut(s) 287
Eco32I GATATC 2 cut(s) 1656, 1679
Eco47I GGWCC 2 cut(s) 826, 1647
Eco57I CTGAAG 2 cut(s) 1178, 2409
EcoRII CCWGG 4 cut(s) 152, 210, 456, 1034
EcoRV GATATC 2 cut(s) 1656, 1679
EcoT14I CCWWGG 2 cut(s) 1186, 2246
ErhI CCWWGG 2 cut(s) 1186, 2246
FalI AAGNNNNNCTT 2 cut(s) 1318, 1350
FaqI GGGAC 2 cut(s) 327, 1660
FauI CCCGC 2 cut(s) 305, 1877
FbaI TGATCA 4 cut(s) 348, 1959, 2095, 2131
FblI GTMKAC 3 cut(s) 707, 755, 2240
Fnu4HI GCNGC 2 cut(s) 450, 2070
FokI GGATG 7 cut(s) 473, 689, 896, 1371, 1918, 2100, 2420
Fsp4HI GCNGC 2 cut(s) 450, 2070
FspBI CTAG 7 cut(s) 321, 540, 642, 1112, 1272, 1926, 2214
GlaI GCGC 6 cut(s) 25, 27, 241, 387, 573, 1662
GluI GCNGC 2 cut(s) 450, 2070
GsaI CCCAGC 2 cut(s) 314, 2043
HaeII RGCGCY 1 cut(s) 243
HaeIII GGCC 2 cut(s) 520, 2251
HapII CCGG 1 cut(s) 237
HgaI GACGC 3 cut(s) 289, 574, 2296
HhaI GCGC 6 cut(s) 26, 28, 242, 388, 574, 1663
Hin1I GRCGYC 1 cut(s) 585
Hin6I GCGC 6 cut(s) 24, 26, 240, 386, 572, 1661
HinP1I GCGC 6 cut(s) 24, 26, 240, 386, 572, 1661
HindIII AAGCTT 1 cut(s) 788
HpaII CCGG 1 cut(s) 237
HphI GGTGA 4 cut(s) 392, 476, 826, 1946
Hpy166II GTNNAC 5 cut(s) 708, 756, 810, 2241, 2447
Hpy188I TCNGA 8 cut(s) 496, 609, 1063, 1247, 1713, 2131, 2286, 2389
Hpy188III TCNNGA 7 cut(s) 719, 1272, 1356, 1926, 2156, 2190, 2345
Hpy8I GTNNAC 5 cut(s) 708, 756, 810, 2241, 2447
HpyAV CCTTC 2 cut(s) 976, 1609
HpyCH4III ACNGT 5 cut(s) 176, 632, 1320, 1982, 2304
HpyCH4IV ACGT 1 cut(s) 1380
HpyF10VI GCNNNNNNNGC 1 cut(s) 1778
HpyF3I CTNAG 8 cut(s) 411, 666, 937, 1093, 1144, 1760, 2154, 2273
HpySE526I ACGT 1 cut(s) 1380
Hsp92I GRCGYC 1 cut(s) 585
HspAI GCGC 6 cut(s) 24, 26, 240, 386, 572, 1661
KroI GCCGGC 1 cut(s) 236
KroNI GCCGGC 1 cut(s) 238
Ksp22I TGATCA 4 cut(s) 348, 1959, 2095, 2131
LmnI GCTCC 2 cut(s) 84, 866
Lsp1109I GCAGC 2 cut(s) 436, 2081
LweI GCATC 6 cut(s) 373, 1349, 1678, 1858, 2344, 2398
MaeI CTAG 7 cut(s) 321, 540, 642, 1112, 1272, 1926, 2214
MaeII ACGT 1 cut(s) 1380
MaeIII GTNAC 4 cut(s) 442, 502, 1135, 1949
MboII GAAGA 5 cut(s) 68, 183, 991, 1405, 2219
MflI RGATCY 3 cut(s) 1053, 1928, 2264
MhlI GDGCHC 5 cut(s) 607, 812, 863, 1774, 1975
MlyI GAGTC 6 cut(s) 215, 309, 427, 713, 1233, 1604
MmeI TCCRAC 4 cut(s) 651, 713, 2264, 2450
MroNI GCCGGC 1 cut(s) 236
MroXI GAANNNNTTC 1 cut(s) 527
MslI CAYNNNNRTG 4 cut(s) 600, 1542, 1823, 2054
MspCI CTTAAG 1 cut(s) 851
MspI CCGG 1 cut(s) 237
MspR9I CCNGG 4 cut(s) 154, 212, 458, 1036
Mva1269I GAATGC 1 cut(s) 1295
MvaI CCWGG 4 cut(s) 154, 212, 458, 1036
MvnI CGCG 2 cut(s) 26, 300
MwoI GCNNNNNNNGC 1 cut(s) 1778
NaeI GCCGGC 1 cut(s) 238
NgoMIV GCCGGC 1 cut(s) 236
NheI GCTAGC 2 cut(s) 641, 1111
NlaIV GGNNCC 3 cut(s) 419, 1648, 2343
NmeAIII GCCGAG 2 cut(s) 280, 715
NmuCI GTSAC 2 cut(s) 442, 1135
NspI RCATGY 3 cut(s) 558, 661, 1267
NspV TTCGAA 1 cut(s) 179
OliI CACNNNNGTG 1 cut(s) 2054
PacI TTAATTAA 1 cut(s) 1563
PasI CCCWGGG 1 cut(s) 211
PauI GCGCGC 1 cut(s) 24
PciI ACATGT 2 cut(s) 657, 1263
PcsI WCGNNNNNNNCGW 1 cut(s) 1986
PctI GAATGC 1 cut(s) 1295
PdiI GCCGGC 1 cut(s) 238
PdmI GAANNNNTTC 1 cut(s) 527
PfeI GAWTC 4 cut(s) 683, 779, 2117, 2199
PflMI CCANNNNNTGG 1 cut(s) 1489
PfoI TCCNGGA 2 cut(s) 456, 1034
PkrI GCNGC 2 cut(s) 451, 2071
PleI GAGTC 6 cut(s) 215, 309, 427, 712, 1232, 1603
PpsI GAGTC 6 cut(s) 215, 309, 427, 712, 1232, 1603
Ppu21I YACGTR 1 cut(s) 1381
PscI ACATGT 2 cut(s) 657, 1263
PshBI ATTAAT 2 cut(s) 1256, 1559
Psp6I CCWGG 4 cut(s) 152, 210, 456, 1034
PspFI CCCAGC 2 cut(s) 310, 2039
PspGI CCWGG 4 cut(s) 152, 210, 456, 1034
PspN4I GGNNCC 3 cut(s) 419, 1648, 2343
PspPI GGNCC 2 cut(s) 826, 1647
PsuI RGATCY 3 cut(s) 1053, 1928, 2264
PteI GCGCGC 1 cut(s) 24
RsaI GTAC 6 cut(s) 359, 565, 934, 965, 1322, 2448
RsaNI GTAC 6 cut(s) 358, 564, 933, 964, 1321, 2447
RseI CAYNNNNRTG 4 cut(s) 600, 1542, 1823, 2054
SatI GCNGC 2 cut(s) 450, 2070
Sau96I GGNCC 2 cut(s) 826, 1647
SchI GAGTC 6 cut(s) 215, 309, 427, 713, 1233, 1604
ScrFI CCNGG 4 cut(s) 154, 212, 458, 1036
SduI GDGCHC 5 cut(s) 607, 812, 863, 1774, 1975
SfaNI GCATC 6 cut(s) 373, 1349, 1678, 1858, 2344, 2398
SfcI CTRYAG 1 cut(s) 2480
SfuI TTCGAA 1 cut(s) 179
SinI GGWCC 2 cut(s) 826, 1647
SmiMI CAYNNNNRTG 4 cut(s) 600, 1542, 1823, 2054
SmlI CTYRAG 4 cut(s) 389, 514, 548, 851
SmoI CTYRAG 4 cut(s) 389, 514, 548, 851
SsiI CCGC 5 cut(s) 67, 298, 687, 1884, 2277
SspMI CTAG 7 cut(s) 321, 540, 642, 1112, 1272, 1926, 2214
StyD4I CCNGG 4 cut(s) 152, 210, 456, 1034
StyI CCWWGG 2 cut(s) 1186, 2246
TaaI ACNGT 5 cut(s) 176, 632, 1320, 1982, 2304
TaiI ACGT 1 cut(s) 1383
TaqI TCGA 3 cut(s) 179, 362, 1989
TaqII GACCGA 1 cut(s) 728
TatI WGTACW 4 cut(s) 357, 963, 1320, 2446
TfiI GAWTC 4 cut(s) 683, 779, 2117, 2199
TscAI CASTG 4 cut(s) 451, 595, 1048, 2067
TseFI GTSAC 2 cut(s) 442, 1135
TseI GCWGC 2 cut(s) 449, 2069
Tsp45I GTSAC 2 cut(s) 442, 1135
TspGWI ACGGA 3 cut(s) 581, 902, 1689
TspRI CASTG 4 cut(s) 451, 595, 1048, 2067
Van91I CCANNNNNTGG 1 cut(s) 1489
Vha464I CTTAAG 1 cut(s) 851
VneI GTGCAC 1 cut(s) 808
VpaK11BI GGWCC 2 cut(s) 826, 1647
VspI ATTAAT 2 cut(s) 1256, 1559
XapI RAATTY 8 cut(s) 874, 926, 1436, 1500, 1638, 1697, 1739, 2148
XbaI TCTAGA 2 cut(s) 1271, 1925
XceI RCATGY 3 cut(s) 558, 661, 1267
XmiI GTMKAC 3 cut(s) 707, 755, 2240
XmnI GAANNNNTTC 1 cut(s) 527
XspI CTAG 7 cut(s) 321, 540, 642, 1112, 1272, 1926, 2214
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.