Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004171.1

Orthogroup ID

OG0008156

Physical Location & Seq

Genomic Coordinates Reverse (-)

19197 .. 21725

Gene Structure 2529 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004171.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2529 bp

atgattcatgcattgacgagggtattttgggaattcagtgaattaaatggcaaatataaatggtattggcgcgcacaagagggcatttggaattggaatggaagagatagggcgaggagggtaatgaggagcttacgcttattggggcttcctcttgcttcaacgattaaaactattattccttgtaaagttaaacccaggcaattccacctgtatcacagttcgaaaccctgttcttcatgctcttatccctccctgggtaaacactcaactgccattgccggcgctctttccctcgccgagacttcaaactcatgttttcttggtctccaaatccatgcccgcatcatcaagctgggactcactagcgacattttttcattgaacaacttgatcaaaatgtactcgaaatgtgggcaactgggtgatgcgctcaaggtgtttgatgaaatgcctgagaggaacctcgtctcttggactctgctcgtcacggctgctgtccaggatggtgagtttgaattgggattggaggtttattcggaattggtaacaacgggcttgaggccgaatgagttctctgttgctagtgttctcaaggcatgtgcaagtacggaagcgcttaagtttggcatcagtgttcattgttgtgctctgaaacttgggattgagcagaaccgttttgtcgctagctctcttttgaacatgtatgctgagttggaggatgttgaatccgccgagggggtgtttgagtgtacaaccgatcttgatactgcttgttggaatactatgattggagggtatacgaagtgtggctatggctttgaatccttgaagcttgtgtctttactggtgtgcaaagggataagcatggaccgcttcacctttgttaatgctcttaaggggtgctcctctatggggaatttagattttgggaagcaactacatggattgctcatccgtagtgagatggaatttagtacctcagtaatgaacgctcttatggatatgtactctacacacgggaagaaggatttggctttcaaagttttcaataggataaaaaccaaagacattatatcctggaacactgcatttggggtcttttctgacgacataaatgcaaaagagcttttaaacttagtccatgagttcatgctagcaaacatgaagccaaaccatgtcactttctcagtcttgtttagacaatgtggtcagctacttgatctcaaccttgggcttcagtttttctgccttgcattgcaatttggagtctgtaatgaagctattgtcagaagctcattaatgaacatgttttctagatgcggggctgtggagatggcattcttgttttttgacagcttactgtacaaaagcataacttcttggaacgagttgatttctggatgcaattcaaactattactatgtggaagccatgaagagtttttacaatctatggcacttgggagttggagtcaatgaatttaccttgtccattatattggaaacttgttttagagatgaacaccaacaaatggttagacaaattcatggtgctattgtcaagtctggctattcattgcatggatatgtttgtagctcattaattaaatgctatgttaaacttggacaacttgatgagtcattcgagttttttaatgggtttgagagattggatgtggaaatttgggggaccatgatatctgcgctggtgcatcagggatatcattttctagctatcaaatttctcaactctctgatggaagctggcaggaagcctgatgaatttatcttgggtagtattctaagtagttgtgctcatattgcaggctatcatttaactcattctgttcattccattgtcatcaaaatgggatttcaaaaacaagtatttgtggttagtgcagttatagatgcttacgcaaaatgcggggatattgaaaatgcaaggatgatatttagccagtcatctagatctggtgatgtagttatatgtaacgctatgatcatagcttgtgctcatcacggtctggtcgaggaagctatggcgatctttgagaaaatgaagttggctaatctaaagcccagccaagccacatttgtgtcagtgttagcagcttgtagccacatgggacgggttgatcaaggtcgtttgttgtttgaatcaatagcctctgatcataagttgaaacaaatttctcaggatatttatggttgcatggttgatatgctttcacgaaatggattccttgaagaagctagacaaataattgaagtagtgccgtatactccttggcctgccattttaagatccttgcttagcggttgtcggacgcatgggaacttacagttgggagaatgggctgttaaggagttagtccagttggttccagaaaatgatgcaccttatgtattattgtcaaaggctcattctgaagcaggtagttgggaggatgctacaaagataaggagggaaatgatagaaagaggtgtacaaaaaaatacaggatatagttggattgagctatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 Pkinase_Tyr

Protein Analysis

842

Amino Acids

94.43

Weight (kDa)

6.81

Isoelectric Point (pI)

33.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008156)

Species	Orthologous Gene IDs
malus_domestica	MD13G1237500.v1.1
prunus_persica	Prupe.1G070000_v2.0.a1 Prupe.1G070000_v2.0.a1 Prupe.1G070000_v2.0.a1 Prupe.1G070000_v2.0.a1 Prupe.1G070000_v2.0.a1 Prupe.1G070000_v2.0.a1
pyrus_communis	pycom13g21030
rosa_chinensis	RchiOBHm_Chr6g0270531
rosa_laevigata	RLG00000013780
rosa_multiflora	Rmu_sc0004171.1_g000004 Rmu_sc0004477.1_g000003 Rmu_sc0036767.1_g000001
rosa_roxburghii	Rroxscaffold_7G00197760 Rroxscaffold_7G00197840
rosa_rugosa	Rorug06G0055300 Rorug06G0055400 Rorug06G0055500
rosa_samantha	Rh6AG174500 Rh6BG177700 Rh6CG173700 Rh6DG166100
rosa_wichuraiana	Rw6G014840 Rw6G014870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1209
Acc36I	ACCTGC	1 cut(s)	2429
AccB7I	CCANNNNNTGG	1 cut(s)	1534
AccI	GTMKAC	2 cut(s)	800, 2285
AccII	CGCG	1 cut(s)	72
AciI	CCGC	6 cut(s)	343, 732, 874, 1323, 1929, 2322
AclWI	GGATC	1 cut(s)	2304
AcsI	RAATTY	9 cut(s)	32, 919, 971, 1481, 1545, 1683, 1742, 1784, 2193
AcuI	CTGAAG	2 cut(s)	1223, 2454
AfaI	GTAC	7 cut(s)	404, 610, 754, 979, 1010, 1367, 2493
AfeI	AGCGCT	1 cut(s)	618
AfiI	CCNNNNNNNGG	4 cut(s)	257, 738, 915, 1534
AflII	CTTAAG	2 cut(s)	620, 896
AflIII	ACRYGT	2 cut(s)	702, 1308
AjnI	CCWGG	4 cut(s)	197, 255, 501, 1079
AjuI	GAANNNNNNNTTGG	6 cut(s)	1016, 1048, 2051, 2083, 2333, 2365
AleI	CACNNNNGTG	1 cut(s)	2099
Alw21I	GWGCWC	4 cut(s)	652, 908, 1819, 2020
Alw26I	GTCTC	3 cut(s)	296, 332, 475
AlwI	GGATC	1 cut(s)	2304
Aor51HI	AGCGCT	1 cut(s)	618
AoxI	GGCC	2 cut(s)	563, 2294
ApeKI	GCWGC	2 cut(s)	494, 2114
ApoI	RAATTY	9 cut(s)	32, 919, 971, 1481, 1545, 1683, 1742, 1784, 2193
AseI	ATTAAT	2 cut(s)	1301, 1604
Asp700I	GAANNNNTTC	1 cut(s)	572
AspLEI	GCGC	6 cut(s)	72, 74, 287, 433, 619, 1708
AspS9I	GGNCC	2 cut(s)	871, 1692
AsuHPI	GGTGA	4 cut(s)	437, 521, 871, 1991
AsuII	TTCGAA	1 cut(s)	224
AsuNHI	GCTAGC	2 cut(s)	686, 1156
AvaII	GGWCC	2 cut(s)	871, 1692
BarI	GAAGNNNNNNTAC	2 cut(s)	1430, 1462
Bbv12I	GWGCWC	4 cut(s)	652, 908, 1819, 2020
BbvI	GCAGC	2 cut(s)	481, 2126
BccI	CCATC	4 cut(s)	500, 961, 1330, 1753
BceAI	ACGGC	2 cut(s)	507, 2266
BcgI	CGANNNNNNTGC	2 cut(s)	1100, 1134
BciT130I	CCWGG	4 cut(s)	199, 257, 503, 1081
BclI	TGATCA	4 cut(s)	393, 2004, 2140, 2176
BcoDI	GTCTC	3 cut(s)	296, 332, 475
BfaI	CTAG	8 cut(s)	366, 585, 687, 1157, 1317, 1733, 1971, 2259
BfmI	CTRYAG	1 cut(s)	2525
BfoI	RGCGCY	2 cut(s)	288, 620
BfrI	CTTAAG	2 cut(s)	620, 896
BfuAI	ACCTGC	1 cut(s)	2429
BglII	AGATCT	1 cut(s)	1973
BisI	GCNGC	2 cut(s)	495, 2115
BlpI	GCTNAGC	1 cut(s)	2318
BlsI	GCNGC	2 cut(s)	496, 2116
Bme1390I	CCNGG	4 cut(s)	199, 257, 503, 1081
Bme18I	GGWCC	2 cut(s)	871, 1692
BmgT120I	GGNCC	2 cut(s)	871, 1692
BmiI	GGNNCC	3 cut(s)	464, 1693, 2388
BmrFI	CCNGG	4 cut(s)	199, 257, 503, 1081
BmrI	ACTGGG	1 cut(s)	431
BmsI	GCATC	9 cut(s)	354, 418, 639, 1310, 1394, 1723, 1903, 2389, 2443
BmtI	GCTAGC	2 cut(s)	690, 1160
BmuI	ACTGGG	1 cut(s)	431
Bpu1102I	GCTNAGC	1 cut(s)	2318
Bpu14I	TTCGAA	1 cut(s)	224
BpuEI	CTTGAG	3 cut(s)	419, 578, 580
BsaI	GGTCTC	1 cut(s)	332
BsaJI	CCNNGG	6 cut(s)	197, 255, 256, 735, 1231, 2291
BsaXI	ACNNNNNCTCC	2 cut(s)	1458, 1488
Bsc4I	CCNNNNNNNGG	4 cut(s)	257, 738, 915, 1534
Bse118I	RCCGGY	1 cut(s)	281
Bse1I	ACTGG	4 cut(s)	426, 852, 1963, 2380
Bse3DI	GCAATG	3 cut(s)	276, 1256, 1577
BseBI	CCWGG	4 cut(s)	199, 257, 503, 1081
BseDI	CCNNGG	6 cut(s)	197, 255, 256, 735, 1231, 2291
BseGI	GGATG	7 cut(s)	511, 727, 954, 1409, 1681, 1956, 2458
BseLI	CCNNNNNNNGG	4 cut(s)	257, 738, 915, 1534
BseMI	GCAATG	3 cut(s)	276, 1256, 1577
BseMII	CTCAG	5 cut(s)	447, 702, 996, 1203, 2213
BseNI	ACTGG	4 cut(s)	426, 852, 1963, 2380
BsePI	GCGCGC	1 cut(s)	70
BseRI	GAGGAG	3 cut(s)	130, 142, 898
BseXI	GCAGC	2 cut(s)	481, 2126
BseYI	CCCAGC	2 cut(s)	355, 2084
BsgI	GTGCAG	1 cut(s)	1923
Bsh1236I	CGCG	1 cut(s)	72
BshFI	GGCC	2 cut(s)	565, 2296
BsiHKAI	GWGCWC	4 cut(s)	652, 908, 1819, 2020
BsiSI	CCGG	1 cut(s)	282
BslFI	GGGAC	3 cut(s)	372, 1705, 2145
BslI	CCNNNNNNNGG	4 cut(s)	257, 738, 915, 1534
BsmAI	GTCTC	3 cut(s)	296, 332, 475
BsmBI	CGTCTC	1 cut(s)	475
BsmFI	GGGAC	3 cut(s)	372, 1705, 2145
BsmI	GAATGC	1 cut(s)	1340
BsnI	GGCC	2 cut(s)	565, 2296
Bso31I	GGTCTC	1 cut(s)	332
Bsp119I	TTCGAA	1 cut(s)	224
Bsp1286I	GDGCHC	4 cut(s)	652, 908, 1819, 2020
Bsp1407I	TGTACA	3 cut(s)	752, 1365, 2491
Bsp143I	GATC	9 cut(s)	393, 760, 1222, 1973, 2004, 2049, 2140, 2176, 2309
Bsp1720I	GCTNAGC	1 cut(s)	2318
BspACI	CCGC	6 cut(s)	343, 732, 874, 1323, 1929, 2322
BspANI	GGCC	2 cut(s)	565, 2296
BspCNI	CTCAG	5 cut(s)	448, 703, 995, 1202, 2212
BspFNI	CGCG	1 cut(s)	72
BspLI	GGNNCC	3 cut(s)	464, 1693, 2388
BspMI	ACCTGC	1 cut(s)	2429
BspOI	GCTAGC	2 cut(s)	690, 1160
BspPI	GGATC	1 cut(s)	2304
BspT104I	TTCGAA	1 cut(s)	224
BspTI	CTTAAG	2 cut(s)	620, 896
BspTNI	GGTCTC	1 cut(s)	332
BsrDI	GCAATG	3 cut(s)	276, 1256, 1577
BsrFI	RCCGGY	1 cut(s)	281
BsrGI	TGTACA	3 cut(s)	752, 1365, 2491
BsrI	ACTGG	4 cut(s)	426, 852, 1963, 2380
BssAI	RCCGGY	1 cut(s)	281
BssECI	CCNNGG	6 cut(s)	197, 255, 256, 735, 1231, 2291
BssHII	GCGCGC	1 cut(s)	70
BssMI	GATC	9 cut(s)	393, 760, 1222, 1973, 2004, 2049, 2140, 2176, 2309
BssNAI	GTATAC	2 cut(s)	801, 2286
BssT1I	CCWWGG	2 cut(s)	1231, 2291
Bst1107I	GTATAC	2 cut(s)	801, 2286
Bst2UI	CCWGG	4 cut(s)	199, 257, 503, 1081
Bst4CI	ACNGT	5 cut(s)	221, 677, 1365, 2027, 2349
Bst6I	CTCTTC	2 cut(s)	97, 1433
BstAFI	CTTAAG	2 cut(s)	620, 896
BstAUI	TGTACA	3 cut(s)	752, 1365, 2491
BstBI	TTCGAA	1 cut(s)	224
BstC8I	GCNNGC	8 cut(s)	72, 283, 343, 688, 1158, 1768, 1828, 2298
BstDEI	CTNAG	8 cut(s)	456, 711, 982, 1138, 1189, 1805, 2199, 2318
BstF5I	GGATG	7 cut(s)	511, 727, 954, 1409, 1681, 1956, 2458
BstFNI	CGCG	1 cut(s)	72
BstH2I	RGCGCY	2 cut(s)	288, 620
BstHHI	GCGC	6 cut(s)	72, 74, 287, 433, 619, 1708
BstKTI	GATC	9 cut(s)	396, 763, 1225, 1976, 2007, 2052, 2143, 2179, 2312
BstMAI	GTCTC	3 cut(s)	296, 332, 475
BstMBI	GATC	9 cut(s)	393, 760, 1222, 1973, 2004, 2049, 2140, 2176, 2309
BstMWI	GCNNNNNNNGC	2 cut(s)	873, 1823
BstNI	CCWGG	4 cut(s)	199, 257, 503, 1081
BstNSI	RCATGY	3 cut(s)	603, 706, 1312
BstSCI	CCNGG	4 cut(s)	197, 255, 501, 1079
BstSFI	CTRYAG	1 cut(s)	2525
BstUI	CGCG	1 cut(s)	72
BstV1I	GCAGC	2 cut(s)	481, 2126
BstX2I	RGATCY	2 cut(s)	1973, 2309
BstXI	CCANNNNNNTGG	1 cut(s)	1501
BstYI	RGATCY	2 cut(s)	1973, 2309
BstZ17I	GTATAC	2 cut(s)	801, 2286
BsuRI	GGCC	2 cut(s)	565, 2296
BtsCI	GGATG	7 cut(s)	511, 727, 954, 1409, 1681, 1956, 2458
BtsI	GCAGTG	1 cut(s)	1086
BtsIMutI	CAGTG	4 cut(s)	43, 640, 1086, 2112
BveI	ACCTGC	1 cut(s)	2429
Cac8I	GCNNGC	8 cut(s)	72, 283, 343, 688, 1158, 1768, 1828, 2298
CfoI	GCGC	6 cut(s)	72, 74, 287, 433, 619, 1708
Cfr10I	RCCGGY	1 cut(s)	281
Cfr13I	GGNCC	2 cut(s)	871, 1692
CseI	GACGC	1 cut(s)	2341
Csp6I	GTAC	7 cut(s)	403, 609, 753, 978, 1009, 1366, 2492
CviQI	GTAC	7 cut(s)	403, 609, 753, 978, 1009, 1366, 2492
DdeI	CTNAG	8 cut(s)	456, 711, 982, 1138, 1189, 1805, 2199, 2318
DpnI	GATC	9 cut(s)	395, 762, 1224, 1975, 2006, 2051, 2142, 2178, 2311
DpnII	GATC	9 cut(s)	393, 760, 1222, 1973, 2004, 2049, 2140, 2176, 2309
DraI	TTTAAA	1 cut(s)	1134
DrdI	GACNNNNNNGTC	1 cut(s)	1209
DseDI	GACNNNNNNGTC	1 cut(s)	1209
Eam1104I	CTCTTC	2 cut(s)	97, 1433
EarI	CTCTTC	2 cut(s)	97, 1433
EciI	GGCGGA	1 cut(s)	721
Eco130I	CCWWGG	2 cut(s)	1231, 2291
Eco31I	GGTCTC	1 cut(s)	332
Eco32I	GATATC	2 cut(s)	1701, 1724
Eco47I	GGWCC	2 cut(s)	871, 1692
Eco47III	AGCGCT	1 cut(s)	618
Eco57I	CTGAAG	2 cut(s)	1223, 2454
EcoRI	GAATTC	1 cut(s)	32
EcoRII	CCWGG	4 cut(s)	197, 255, 501, 1079
EcoRV	GATATC	2 cut(s)	1701, 1724
EcoT14I	CCWWGG	2 cut(s)	1231, 2291
EcoT22I	ATGCAT	1 cut(s)	13
ErhI	CCWWGG	2 cut(s)	1231, 2291
Esp3I	CGTCTC	1 cut(s)	475
FalI	AAGNNNNNCTT	2 cut(s)	1363, 1395
FaqI	GGGAC	3 cut(s)	372, 1705, 2145
FauI	CCCGC	3 cut(s)	350, 1316, 1922
FbaI	TGATCA	4 cut(s)	393, 2004, 2140, 2176
FblI	GTMKAC	2 cut(s)	800, 2285
Fnu4HI	GCNGC	2 cut(s)	495, 2115
FokI	GGATG	7 cut(s)	518, 734, 941, 1416, 1688, 1963, 2465
Fsp4HI	GCNGC	2 cut(s)	495, 2115
FspBI	CTAG	8 cut(s)	366, 585, 687, 1157, 1317, 1733, 1971, 2259
GlaI	GCGC	6 cut(s)	71, 73, 286, 432, 618, 1707
GluI	GCNGC	2 cut(s)	495, 2115
GsaI	CCCAGC	2 cut(s)	359, 2088
HaeII	RGCGCY	2 cut(s)	288, 620
HaeIII	GGCC	2 cut(s)	565, 2296
HapII	CCGG	1 cut(s)	282
HgaI	GACGC	1 cut(s)	2341
HhaI	GCGC	6 cut(s)	72, 74, 287, 433, 619, 1708
Hin6I	GCGC	6 cut(s)	70, 72, 285, 431, 617, 1706
HinP1I	GCGC	6 cut(s)	70, 72, 285, 431, 617, 1706
HindIII	AAGCTT	1 cut(s)	833
HpaII	CCGG	1 cut(s)	282
HphI	GGTGA	4 cut(s)	437, 521, 871, 1991
Hpy166II	GTNNAC	5 cut(s)	263, 753, 801, 2286, 2492
Hpy188I	TCNGA	8 cut(s)	541, 654, 1108, 1292, 1758, 2176, 2331, 2434
Hpy188III	TCNNGA	7 cut(s)	764, 1317, 1401, 1971, 2201, 2235, 2390
Hpy8I	GTNNAC	5 cut(s)	263, 753, 801, 2286, 2492
HpyAV	CCTTC	1 cut(s)	1021
HpyCH4III	ACNGT	5 cut(s)	221, 677, 1365, 2027, 2349
HpyF10VI	GCNNNNNNNGC	2 cut(s)	873, 1823
HpyF3I	CTNAG	8 cut(s)	456, 711, 982, 1138, 1189, 1805, 2199, 2318
HspAI	GCGC	6 cut(s)	70, 72, 285, 431, 617, 1706
KroI	GCCGGC	1 cut(s)	281
KroNI	GCCGGC	1 cut(s)	283
Ksp22I	TGATCA	4 cut(s)	393, 2004, 2140, 2176
Kzo9I	GATC	9 cut(s)	393, 760, 1222, 1973, 2004, 2049, 2140, 2176, 2309
LmnI	GCTCC	2 cut(s)	129, 911
Lsp1109I	GCAGC	2 cut(s)	481, 2126
LweI	GCATC	9 cut(s)	354, 418, 639, 1310, 1394, 1723, 1903, 2389, 2443
MaeI	CTAG	8 cut(s)	366, 585, 687, 1157, 1317, 1733, 1971, 2259
MaeIII	GTNAC	4 cut(s)	487, 547, 1180, 1994
MalI	GATC	9 cut(s)	395, 762, 1224, 1975, 2006, 2051, 2142, 2178, 2311
MboI	GATC	9 cut(s)	393, 760, 1222, 1973, 2004, 2049, 2140, 2176, 2309
MboII	GAAGA	5 cut(s)	114, 228, 1036, 1450, 2264
MflI	RGATCY	2 cut(s)	1973, 2309
MhlI	GDGCHC	4 cut(s)	652, 908, 1819, 2020
MlyI	GAGTC	5 cut(s)	354, 472, 1278, 1482, 1649
MmeI	TCCRAC	5 cut(s)	696, 758, 1450, 2309, 2495
Mph1103I	ATGCAT	1 cut(s)	13
MroNI	GCCGGC	1 cut(s)	281
MroXI	GAANNNNTTC	1 cut(s)	572
MslI	CAYNNNNRTG	4 cut(s)	645, 1587, 1868, 2099
MspCI	CTTAAG	2 cut(s)	620, 896
MspI	CCGG	1 cut(s)	282
MspR9I	CCNGG	4 cut(s)	199, 257, 503, 1081
Mva1269I	GAATGC	1 cut(s)	1340
MvaI	CCWGG	4 cut(s)	199, 257, 503, 1081
MvnI	CGCG	1 cut(s)	72
MwoI	GCNNNNNNNGC	2 cut(s)	873, 1823
NaeI	GCCGGC	1 cut(s)	283
NdeII	GATC	9 cut(s)	393, 760, 1222, 1973, 2004, 2049, 2140, 2176, 2309
NgoMIV	GCCGGC	1 cut(s)	281
NheI	GCTAGC	2 cut(s)	686, 1156
NlaIV	GGNNCC	3 cut(s)	464, 1693, 2388
NmeAIII	GCCGAG	2 cut(s)	325, 760
NmuCI	GTSAC	2 cut(s)	487, 1180
NsiI	ATGCAT	1 cut(s)	13
NspI	RCATGY	3 cut(s)	603, 706, 1312
NspV	TTCGAA	1 cut(s)	224
OliI	CACNNNNGTG	1 cut(s)	2099
PacI	TTAATTAA	1 cut(s)	1608
PasI	CCCWGGG	1 cut(s)	256
PauI	GCGCGC	1 cut(s)	70
PciI	ACATGT	2 cut(s)	702, 1308
PcsI	WCGNNNNNNNCGW	1 cut(s)	2031
PctI	GAATGC	1 cut(s)	1340
PdiI	GCCGGC	1 cut(s)	283
PdmI	GAANNNNTTC	1 cut(s)	572
PfeI	GAWTC	5 cut(s)	4, 728, 824, 2162, 2244
PflMI	CCANNNNNTGG	1 cut(s)	1534
PfoI	TCCNGGA	2 cut(s)	501, 1079
PkrI	GCNGC	2 cut(s)	496, 2116
PleI	GAGTC	5 cut(s)	354, 472, 1277, 1481, 1648
PpsI	GAGTC	5 cut(s)	354, 472, 1277, 1481, 1648
PscI	ACATGT	2 cut(s)	702, 1308
PshBI	ATTAAT	2 cut(s)	1301, 1604
Psp6I	CCWGG	4 cut(s)	197, 255, 501, 1079
PspFI	CCCAGC	2 cut(s)	355, 2084
PspGI	CCWGG	4 cut(s)	197, 255, 501, 1079
PspN4I	GGNNCC	3 cut(s)	464, 1693, 2388
PspPI	GGNCC	2 cut(s)	871, 1692
PsuI	RGATCY	2 cut(s)	1973, 2309
PteI	GCGCGC	1 cut(s)	70
RsaI	GTAC	7 cut(s)	404, 610, 754, 979, 1010, 1367, 2493
RsaNI	GTAC	7 cut(s)	403, 609, 753, 978, 1009, 1366, 2492
RseI	CAYNNNNRTG	4 cut(s)	645, 1587, 1868, 2099
SatI	GCNGC	2 cut(s)	495, 2115
Sau3AI	GATC	9 cut(s)	393, 760, 1222, 1973, 2004, 2049, 2140, 2176, 2309
Sau96I	GGNCC	2 cut(s)	871, 1692
SchI	GAGTC	5 cut(s)	354, 472, 1278, 1482, 1649
ScrFI	CCNGG	4 cut(s)	199, 257, 503, 1081
SduI	GDGCHC	4 cut(s)	652, 908, 1819, 2020
SfaNI	GCATC	9 cut(s)	354, 418, 639, 1310, 1394, 1723, 1903, 2389, 2443
SfcI	CTRYAG	1 cut(s)	2525
SfuI	TTCGAA	1 cut(s)	224
SinI	GGWCC	2 cut(s)	871, 1692
SmiMI	CAYNNNNRTG	4 cut(s)	645, 1587, 1868, 2099
SmlI	CTYRAG	5 cut(s)	434, 559, 593, 620, 896
SmoI	CTYRAG	5 cut(s)	434, 559, 593, 620, 896
SsiI	CCGC	6 cut(s)	343, 732, 874, 1323, 1929, 2322
SspMI	CTAG	8 cut(s)	366, 585, 687, 1157, 1317, 1733, 1971, 2259
StyD4I	CCNGG	4 cut(s)	197, 255, 501, 1079
StyI	CCWWGG	2 cut(s)	1231, 2291
TaaI	ACNGT	5 cut(s)	221, 677, 1365, 2027, 2349
TaqI	TCGA	4 cut(s)	224, 407, 1647, 2034
TatI	WGTACW	5 cut(s)	402, 752, 1008, 1365, 2491
TfiI	GAWTC	5 cut(s)	4, 728, 824, 2162, 2244
TscAI	CASTG	4 cut(s)	43, 640, 1093, 2112
TseFI	GTSAC	2 cut(s)	487, 1180
TseI	GCWGC	2 cut(s)	494, 2114
Tsp45I	GTSAC	2 cut(s)	487, 1180
TspGWI	ACGGA	2 cut(s)	626, 947
TspRI	CASTG	4 cut(s)	43, 640, 1093, 2112
Van91I	CCANNNNNTGG	1 cut(s)	1534
Vha464I	CTTAAG	2 cut(s)	620, 896
VpaK11BI	GGWCC	2 cut(s)	871, 1692
VspI	ATTAAT	2 cut(s)	1301, 1604
XapI	RAATTY	9 cut(s)	32, 919, 971, 1481, 1545, 1683, 1742, 1784, 2193
XbaI	TCTAGA	2 cut(s)	1316, 1970
XceI	RCATGY	3 cut(s)	603, 706, 1312
XmiI	GTMKAC	2 cut(s)	800, 2285
XmnI	GAANNNNTTC	1 cut(s)	572
XspI	CTAG	8 cut(s)	366, 585, 687, 1157, 1317, 1733, 1971, 2259
Zsp2I	ATGCAT	1 cut(s)	13

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.