Rh6AG174500

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0008156
Physical Location & Seq
Forward (+)
28249767 .. 28252172
2406 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG174500.1

Sequence Viewer

Length: 2406 bp
ATGAGGAGCTTACGCTTATTGGGGCTTCCTCTTGCTTCAACGATTAAAACTATTATTCCTTGTAAAGTTAAAACCAGGCAATTCCACCTGTATCACAGTTCGAAACCCTGTTCTTCATGCTCTTATCCCTCCCTGGGTAAACACTCAACTGCCATTGCCGGCGCTCTTTCCCTCGCCGAGACTTCAAACTCCTGTTTTCTTGGTCTCCAAATCCATGCCCGCATCATCAAGCTGGGACTCACTAGCGACATTTTTTCATTGAATAACTTGATCAAAATGTACTCGAAATGTGGGCAACTGGGTGATGCGCTCAAGGTGTTTGATGAAATGCCTGAGAGGAACCTCGTCTCTTGGACTCTGCTCGTCACGGCTGCTGTCCAGGATGGTGAGTTTGAATTGGGATTGGGGGTTTATTCGGAATTGGTAACAACGGGCTTGAGGCCGAATGAGTTCTCTGTTCCTAGTGTTCTCAAGGCATGTGCAAGTACGGAAGCGCTTAAGTTTGGCATCAGTGTTCATTGTTGTGCTCTGAAACTTGGGATTGAGCAGAACCGTTTTGTCGCTAGCTCTCTTTTGAACATGTATGCTGAGTTGGAGGATGTTGAATCCGCCGAGGGGGTGTTTGAGTCTACGACCGATCTTGATACTGCTTGTTGGAATACTATGATTGGAGGGTATATGAAGTGTGGCTATGGCTTTGAATCCTTGAAGCTTGTGTCTTTACTGGTGTGCAAGGGGATAAGCATGGACCACTTCACCTTTGTTAATGCTCTTAAGGGGTGCTCCTCTATGGGGAATTTAGATTTTGGGAAGCAACTACATGGATTGCTCATCCGTAGTGAGATGGAATTTAGTACCTCAGTAATGAACGCTCTTATGGATATGTACTCAACACACGGGAAGAAGGATTTGGCTTTCAAAGTTTTCAATAGGATAAAAACCAAAGACATAATATCCTGGAACACTGCATTTGGGGTCTTTTCTGACGACATAAATGCAAAAGAGCTTTTAAACTTAGTCCATGAGTTCATGCTAGCAAACATGAAGCCAAACCATGTCACTTTCTCAGTCTTGTTTAGACAATGTGGTCAGCTACTTGATCTCAACCTTGGGCTTCAGTTTTTCTGCCTTGCATTGCAATTTGGAGTCTGTAATGAAGCTATTGTCAGAACCTCATTAATGAACATGTTTTCTAGATGTGGGGCTGTGGAGATGGCATTCTTGTTTTTTGACAGCTTACTGTACAAAAGCATAACTTCTTGGAACGAGTTGATTTCTGGATGCAATTCAAACTATTACTATGTGGAAGCCATGAAGAGTTTTTACAATCTATGGCACTTGGGAGTTGGAGTCAATGAATTTACCTTGTCCATTATATTGGAAACTTGTTTTAGAGATGAACACCAACAAATGGTTAGACAAATTCATGGTGCTATTGTCAAGTCTGGCTATTCATTGCATGGATATGTTTGTAGCTCATTAATTAAATGCTATGTTAAACTTGGACAACTTGATGAGTCATTCGAGTTTTTTAATGGGTTTGAGAGATTGGATGTGGAAATTTGGGGGACCATGATATCTGCGCTGGTGCATCAGGGATATCATTTTCAAGCTATCAAATTTCTCAACTCTCTGATGGAAGCTGGCAGGAAGCCTGATGAATTTATCTTGGGTAGTATTCTAAGTAGTTGTGCTCATATTGCAGGCTATCATTTAACTCATTCTGTTCATTCCATTGTCATCAAAATGGGATTTCAAAAACAAGTATTTGTGGTTAGTGCAGTTATAGATGCTTACGCAAAATGCGGGGATATTGAAAATGCAAGGATGATATTTAGCCAGTCATCTAGATCTGGTGATGTAGTTATATGTAACGCTATGATCATAGCTTGTGCTCATCACGGTCTGGTCGAGGAAGCTATGGCGATCTTTGAGAAAATGAAGTTGGCTAATCTAAAGCCCAGCCAAGCCACATTTGTGTCAGTGTTAGCAGCTTGTAGCCACATGGGACGGGTTGATCAAGGTCGTTTGTTGTTTGAATCAATAGCCTCTGATCATAAGTTGAAACAAATTTCTCAGGATATTTATGGTTGCATGGTTGATATGCTTTCACGAAATGGATTCCTTGAAGAAGCTAGACAAATAATTGAAGTAGTGCCGTATACTCCTTGGCCTGCCATTTTAAGATCCTTGCTTAGCGGTTGTCGGACGCATGGGAACTTACAGTTGGGAGAATGGGCTGTTAAGGAGTTAGTCCAGTTGGTTCCAGAAAATGATGCACCTTATGTATTATTGTCAAAGGCTCATTCTGAAGCAGGTAGTTGGGAGGATGCTACAAAGATAAGGAGGGAAATGATAGAAAGAGGTGTACAAAAAAATACAGGATATAGTTGGATTGAGCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 Pkinase_Tyr

Protein Analysis

801

Amino Acids

89.21

Weight (kDa)

6.44

Isoelectric Point (pI)

33.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 83 - 115 3e-06 PPR repeat family
PPR PF01535 86 - 114 5.4e-06 PPR repeat
PPR_2 PF13041 215 - 262 3.4e-06 PPR repeat family
PPR_2 PF13041 620 - 667 2.4e-09 PPR repeat family
PPR PF01535 622 - 649 1.8e-06 PPR repeat
E_motif PF20431 738 - 800 1.5e-13 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1086
Acc36I ACCTGC 1 cut(s) 2306
AccB7I CCANNNNNTGG 1 cut(s) 1411
AccI GTMKAC 2 cut(s) 629, 2162
AciI CCGC 4 cut(s) 220, 609, 1806, 2199
AclWI GGATC 1 cut(s) 2181
AcsI RAATTY 8 cut(s) 796, 848, 1358, 1422, 1560, 1619, 1661, 2070
AcuI CTGAAG 2 cut(s) 1100, 2331
AfaI GTAC 6 cut(s) 281, 487, 856, 887, 1244, 2370
AfeI AGCGCT 1 cut(s) 495
AfiI CCNNNNNNNGG 4 cut(s) 134, 615, 792, 1411
AflII CTTAAG 2 cut(s) 497, 773
AflIII ACRYGT 2 cut(s) 579, 1185
AjnI CCWGG 4 cut(s) 74, 132, 378, 956
AjuI GAANNNNNNNTTGG 6 cut(s) 893, 925, 1928, 1960, 2210, 2242
AleI CACNNNNGTG 1 cut(s) 1976
Alw21I GWGCWC 4 cut(s) 529, 785, 1696, 1897
Alw26I GTCTC 3 cut(s) 173, 209, 352
AlwI GGATC 1 cut(s) 2181
Aor51HI AGCGCT 1 cut(s) 495
AoxI GGCC 2 cut(s) 440, 2171
ApeKI GCWGC 2 cut(s) 371, 1991
ApoI RAATTY 8 cut(s) 796, 848, 1358, 1422, 1560, 1619, 1661, 2070
AseI ATTAAT 2 cut(s) 1178, 1481
Asp700I GAANNNNTTC 1 cut(s) 449
AspLEI GCGC 4 cut(s) 164, 310, 496, 1585
AspS9I GGNCC 2 cut(s) 748, 1569
AsuHPI GGTGA 4 cut(s) 314, 398, 748, 1868
AsuII TTCGAA 1 cut(s) 101
AsuNHI GCTAGC 2 cut(s) 563, 1033
AvaII GGWCC 2 cut(s) 748, 1569
BarI GAAGNNNNNNTAC 2 cut(s) 1307, 1339
Bbv12I GWGCWC 4 cut(s) 529, 785, 1696, 1897
BbvI GCAGC 2 cut(s) 358, 2003
BccI CCATC 4 cut(s) 377, 838, 1207, 1630
BceAI ACGGC 2 cut(s) 384, 2143
BcgI CGANNNNNNTGC 2 cut(s) 977, 1011
BciT130I CCWGG 4 cut(s) 76, 134, 380, 958
BclI TGATCA 4 cut(s) 270, 1881, 2017, 2053
BcoDI GTCTC 3 cut(s) 173, 209, 352
BfaI CTAG 7 cut(s) 243, 462, 564, 1034, 1194, 1848, 2136
BfmI CTRYAG 1 cut(s) 2402
BfoI RGCGCY 2 cut(s) 165, 497
BfrI CTTAAG 2 cut(s) 497, 773
BfuAI ACCTGC 1 cut(s) 2306
BglII AGATCT 1 cut(s) 1850
BisI GCNGC 2 cut(s) 372, 1992
BlpI GCTNAGC 1 cut(s) 2195
BlsI GCNGC 2 cut(s) 373, 1993
Bme1390I CCNGG 4 cut(s) 76, 134, 380, 958
Bme18I GGWCC 2 cut(s) 748, 1569
BmgT120I GGNCC 2 cut(s) 748, 1569
BmiI GGNNCC 3 cut(s) 341, 1570, 2265
BmrFI CCNGG 4 cut(s) 76, 134, 380, 958
BmrI ACTGGG 1 cut(s) 308
BmsI GCATC 8 cut(s) 231, 295, 516, 1271, 1600, 1780, 2266, 2320
BmtI GCTAGC 2 cut(s) 567, 1037
BmuI ACTGGG 1 cut(s) 308
Bpu1102I GCTNAGC 1 cut(s) 2195
Bpu14I TTCGAA 1 cut(s) 101
BpuEI CTTGAG 3 cut(s) 296, 455, 457
BsaI GGTCTC 1 cut(s) 209
BsaJI CCNNGG 5 cut(s) 132, 133, 612, 1108, 2168
BsaXI ACNNNNNCTCC 2 cut(s) 1335, 1365
Bsc4I CCNNNNNNNGG 4 cut(s) 134, 615, 792, 1411
Bse118I RCCGGY 1 cut(s) 158
Bse1I ACTGG 4 cut(s) 303, 729, 1840, 2257
Bse3DI GCAATG 3 cut(s) 153, 1133, 1454
BseBI CCWGG 4 cut(s) 76, 134, 380, 958
BseDI CCNNGG 5 cut(s) 132, 133, 612, 1108, 2168
BseGI GGATG 7 cut(s) 388, 604, 831, 1286, 1558, 1833, 2335
BseLI CCNNNNNNNGG 4 cut(s) 134, 615, 792, 1411
BseMI GCAATG 3 cut(s) 153, 1133, 1454
BseMII CTCAG 5 cut(s) 324, 579, 873, 1080, 2090
BseNI ACTGG 4 cut(s) 303, 729, 1840, 2257
BseRI GAGGAG 2 cut(s) 19, 775
BseXI GCAGC 2 cut(s) 358, 2003
BseYI CCCAGC 2 cut(s) 232, 1961
BsgI GTGCAG 1 cut(s) 1800
Bsh1285I CGRYCG 1 cut(s) 636
BshFI GGCC 2 cut(s) 442, 2173
BsiEI CGRYCG 1 cut(s) 636
BsiHKAI GWGCWC 4 cut(s) 529, 785, 1696, 1897
BsiSI CCGG 1 cut(s) 159
BslFI GGGAC 3 cut(s) 249, 1582, 2022
BslI CCNNNNNNNGG 4 cut(s) 134, 615, 792, 1411
BsmAI GTCTC 3 cut(s) 173, 209, 352
BsmBI CGTCTC 1 cut(s) 352
BsmFI GGGAC 3 cut(s) 249, 1582, 2022
BsmI GAATGC 1 cut(s) 1217
BsnI GGCC 2 cut(s) 442, 2173
Bso31I GGTCTC 1 cut(s) 209
Bsp119I TTCGAA 1 cut(s) 101
Bsp1286I GDGCHC 4 cut(s) 529, 785, 1696, 1897
Bsp1407I TGTACA 2 cut(s) 1242, 2368
Bsp143I GATC 9 cut(s) 270, 637, 1099, 1850, 1881, 1926, 2017, 2053, 2186
Bsp1720I GCTNAGC 1 cut(s) 2195
BspACI CCGC 4 cut(s) 220, 609, 1806, 2199
BspANI GGCC 2 cut(s) 442, 2173
BspCNI CTCAG 5 cut(s) 325, 580, 872, 1079, 2089
BspLI GGNNCC 3 cut(s) 341, 1570, 2265
BspMI ACCTGC 1 cut(s) 2306
BspOI GCTAGC 2 cut(s) 567, 1037
BspPI GGATC 1 cut(s) 2181
BspT104I TTCGAA 1 cut(s) 101
BspTI CTTAAG 2 cut(s) 497, 773
BspTNI GGTCTC 1 cut(s) 209
BsrDI GCAATG 3 cut(s) 153, 1133, 1454
BsrFI RCCGGY 1 cut(s) 158
BsrGI TGTACA 2 cut(s) 1242, 2368
BsrI ACTGG 4 cut(s) 303, 729, 1840, 2257
BssAI RCCGGY 1 cut(s) 158
BssECI CCNNGG 5 cut(s) 132, 133, 612, 1108, 2168
BssMI GATC 9 cut(s) 270, 637, 1099, 1850, 1881, 1926, 2017, 2053, 2186
BssNAI GTATAC 1 cut(s) 2163
BssT1I CCWWGG 2 cut(s) 1108, 2168
Bst1107I GTATAC 1 cut(s) 2163
Bst2UI CCWGG 4 cut(s) 76, 134, 380, 958
Bst4CI ACNGT 5 cut(s) 98, 554, 1242, 1904, 2226
Bst6I CTCTTC 1 cut(s) 1310
BstAFI CTTAAG 2 cut(s) 497, 773
BstAUI TGTACA 2 cut(s) 1242, 2368
BstBI TTCGAA 1 cut(s) 101
BstC8I GCNNGC 7 cut(s) 160, 220, 565, 1035, 1645, 1705, 2175
BstDEI CTNAG 8 cut(s) 333, 588, 859, 1015, 1066, 1682, 2076, 2195
BstF5I GGATG 7 cut(s) 388, 604, 831, 1286, 1558, 1833, 2335
BstH2I RGCGCY 2 cut(s) 165, 497
BstHHI GCGC 4 cut(s) 164, 310, 496, 1585
BstKTI GATC 9 cut(s) 273, 640, 1102, 1853, 1884, 1929, 2020, 2056, 2189
BstMAI GTCTC 3 cut(s) 173, 209, 352
BstMBI GATC 9 cut(s) 270, 637, 1099, 1850, 1881, 1926, 2017, 2053, 2186
BstMCI CGRYCG 1 cut(s) 636
BstMWI GCNNNNNNNGC 1 cut(s) 1700
BstNI CCWGG 4 cut(s) 76, 134, 380, 958
BstNSI RCATGY 3 cut(s) 480, 583, 1189
BstSCI CCNGG 4 cut(s) 74, 132, 378, 956
BstSFI CTRYAG 1 cut(s) 2402
BstV1I GCAGC 2 cut(s) 358, 2003
BstX2I RGATCY 2 cut(s) 1850, 2186
BstXI CCANNNNNNTGG 1 cut(s) 1378
BstYI RGATCY 2 cut(s) 1850, 2186
BstZ17I GTATAC 1 cut(s) 2163
BsuRI GGCC 2 cut(s) 442, 2173
BtsCI GGATG 7 cut(s) 388, 604, 831, 1286, 1558, 1833, 2335
BtsI GCAGTG 1 cut(s) 963
BtsIMutI CAGTG 3 cut(s) 517, 963, 1989
BveI ACCTGC 1 cut(s) 2306
Cac8I GCNNGC 7 cut(s) 160, 220, 565, 1035, 1645, 1705, 2175
CfoI GCGC 4 cut(s) 164, 310, 496, 1585
Cfr10I RCCGGY 1 cut(s) 158
Cfr13I GGNCC 2 cut(s) 748, 1569
CseI GACGC 1 cut(s) 2218
Csp6I GTAC 6 cut(s) 280, 486, 855, 886, 1243, 2369
CviQI GTAC 6 cut(s) 280, 486, 855, 886, 1243, 2369
DdeI CTNAG 8 cut(s) 333, 588, 859, 1015, 1066, 1682, 2076, 2195
DpnI GATC 9 cut(s) 272, 639, 1101, 1852, 1883, 1928, 2019, 2055, 2188
DpnII GATC 9 cut(s) 270, 637, 1099, 1850, 1881, 1926, 2017, 2053, 2186
DraI TTTAAA 1 cut(s) 1011
DrdI GACNNNNNNGTC 1 cut(s) 1086
DseDI GACNNNNNNGTC 1 cut(s) 1086
Eam1104I CTCTTC 1 cut(s) 1310
EarI CTCTTC 1 cut(s) 1310
EciI GGCGGA 1 cut(s) 598
Eco130I CCWWGG 2 cut(s) 1108, 2168
Eco31I GGTCTC 1 cut(s) 209
Eco32I GATATC 2 cut(s) 1578, 1601
Eco47I GGWCC 2 cut(s) 748, 1569
Eco47III AGCGCT 1 cut(s) 495
Eco57I CTGAAG 2 cut(s) 1100, 2331
EcoRII CCWGG 4 cut(s) 74, 132, 378, 956
EcoRV GATATC 2 cut(s) 1578, 1601
EcoT14I CCWWGG 2 cut(s) 1108, 2168
ErhI CCWWGG 2 cut(s) 1108, 2168
Esp3I CGTCTC 1 cut(s) 352
FalI AAGNNNNNCTT 2 cut(s) 1240, 1272
FaqI GGGAC 3 cut(s) 249, 1582, 2022
FauI CCCGC 2 cut(s) 227, 1799
FbaI TGATCA 4 cut(s) 270, 1881, 2017, 2053
FblI GTMKAC 2 cut(s) 629, 2162
Fnu4HI GCNGC 2 cut(s) 372, 1992
FokI GGATG 7 cut(s) 395, 611, 818, 1293, 1565, 1840, 2342
Fsp4HI GCNGC 2 cut(s) 372, 1992
FspBI CTAG 7 cut(s) 243, 462, 564, 1034, 1194, 1848, 2136
GlaI GCGC 4 cut(s) 163, 309, 495, 1584
GluI GCNGC 2 cut(s) 372, 1992
GsaI CCCAGC 2 cut(s) 236, 1965
HaeII RGCGCY 2 cut(s) 165, 497
HaeIII GGCC 2 cut(s) 442, 2173
HapII CCGG 1 cut(s) 159
HgaI GACGC 1 cut(s) 2218
HhaI GCGC 4 cut(s) 164, 310, 496, 1585
Hin6I GCGC 4 cut(s) 162, 308, 494, 1583
HinP1I GCGC 4 cut(s) 162, 308, 494, 1583
HindIII AAGCTT 1 cut(s) 710
HpaII CCGG 1 cut(s) 159
HphI GGTGA 4 cut(s) 314, 398, 748, 1868
Hpy166II GTNNAC 4 cut(s) 140, 630, 2163, 2369
Hpy188I TCNGA 8 cut(s) 418, 531, 985, 1169, 1635, 2053, 2208, 2311
Hpy188III TCNNGA 7 cut(s) 641, 1194, 1278, 1848, 2078, 2112, 2267
Hpy8I GTNNAC 4 cut(s) 140, 630, 2163, 2369
HpyAV CCTTC 1 cut(s) 898
HpyCH4III ACNGT 5 cut(s) 98, 554, 1242, 1904, 2226
HpyF10VI GCNNNNNNNGC 1 cut(s) 1700
HpyF3I CTNAG 8 cut(s) 333, 588, 859, 1015, 1066, 1682, 2076, 2195
HspAI GCGC 4 cut(s) 162, 308, 494, 1583
KroI GCCGGC 1 cut(s) 158
KroNI GCCGGC 1 cut(s) 160
Ksp22I TGATCA 4 cut(s) 270, 1881, 2017, 2053
Kzo9I GATC 9 cut(s) 270, 637, 1099, 1850, 1881, 1926, 2017, 2053, 2186
LmnI GCTCC 2 cut(s) 6, 788
Lsp1109I GCAGC 2 cut(s) 358, 2003
LweI GCATC 8 cut(s) 231, 295, 516, 1271, 1600, 1780, 2266, 2320
MaeI CTAG 7 cut(s) 243, 462, 564, 1034, 1194, 1848, 2136
MaeIII GTNAC 4 cut(s) 364, 424, 1057, 1871
MalI GATC 9 cut(s) 272, 639, 1101, 1852, 1883, 1928, 2019, 2055, 2188
MboI GATC 9 cut(s) 270, 637, 1099, 1850, 1881, 1926, 2017, 2053, 2186
MboII GAAGA 4 cut(s) 105, 913, 1327, 2141
MflI RGATCY 2 cut(s) 1850, 2186
MhlI GDGCHC 4 cut(s) 529, 785, 1696, 1897
MlyI GAGTC 6 cut(s) 231, 349, 635, 1155, 1359, 1526
MmeI TCCRAC 5 cut(s) 573, 635, 1327, 2186, 2372
MroNI GCCGGC 1 cut(s) 158
MroXI GAANNNNTTC 1 cut(s) 449
MslI CAYNNNNRTG 4 cut(s) 522, 1464, 1745, 1976
MspCI CTTAAG 2 cut(s) 497, 773
MspI CCGG 1 cut(s) 159
MspR9I CCNGG 4 cut(s) 76, 134, 380, 958
Mva1269I GAATGC 1 cut(s) 1217
MvaI CCWGG 4 cut(s) 76, 134, 380, 958
MwoI GCNNNNNNNGC 1 cut(s) 1700
NaeI GCCGGC 1 cut(s) 160
NdeII GATC 9 cut(s) 270, 637, 1099, 1850, 1881, 1926, 2017, 2053, 2186
NgoMIV GCCGGC 1 cut(s) 158
NheI GCTAGC 2 cut(s) 563, 1033
NlaIV GGNNCC 3 cut(s) 341, 1570, 2265
NmeAIII GCCGAG 2 cut(s) 202, 637
NmuCI GTSAC 2 cut(s) 364, 1057
NspI RCATGY 3 cut(s) 480, 583, 1189
NspV TTCGAA 1 cut(s) 101
OliI CACNNNNGTG 1 cut(s) 1976
PacI TTAATTAA 1 cut(s) 1485
PasI CCCWGGG 1 cut(s) 133
PciI ACATGT 2 cut(s) 579, 1185
PcsI WCGNNNNNNNCGW 1 cut(s) 1908
PctI GAATGC 1 cut(s) 1217
PdiI GCCGGC 1 cut(s) 160
PdmI GAANNNNTTC 1 cut(s) 449
PfeI GAWTC 4 cut(s) 605, 701, 2039, 2121
PflMI CCANNNNNTGG 1 cut(s) 1411
PfoI TCCNGGA 2 cut(s) 378, 956
PkrI GCNGC 2 cut(s) 373, 1993
PleI GAGTC 6 cut(s) 231, 349, 634, 1154, 1358, 1525
PpsI GAGTC 6 cut(s) 231, 349, 634, 1154, 1358, 1525
PscI ACATGT 2 cut(s) 579, 1185
PshBI ATTAAT 2 cut(s) 1178, 1481
Psp6I CCWGG 4 cut(s) 74, 132, 378, 956
PspFI CCCAGC 2 cut(s) 232, 1961
PspGI CCWGG 4 cut(s) 74, 132, 378, 956
PspN4I GGNNCC 3 cut(s) 341, 1570, 2265
PspPI GGNCC 2 cut(s) 748, 1569
PsuI RGATCY 2 cut(s) 1850, 2186
RsaI GTAC 6 cut(s) 281, 487, 856, 887, 1244, 2370
RsaNI GTAC 6 cut(s) 280, 486, 855, 886, 1243, 2369
RseI CAYNNNNRTG 4 cut(s) 522, 1464, 1745, 1976
SatI GCNGC 2 cut(s) 372, 1992
Sau3AI GATC 9 cut(s) 270, 637, 1099, 1850, 1881, 1926, 2017, 2053, 2186
Sau96I GGNCC 2 cut(s) 748, 1569
SchI GAGTC 6 cut(s) 231, 349, 635, 1155, 1359, 1526
ScrFI CCNGG 4 cut(s) 76, 134, 380, 958
SduI GDGCHC 4 cut(s) 529, 785, 1696, 1897
SfaNI GCATC 8 cut(s) 231, 295, 516, 1271, 1600, 1780, 2266, 2320
SfcI CTRYAG 1 cut(s) 2402
SfuI TTCGAA 1 cut(s) 101
SinI GGWCC 2 cut(s) 748, 1569
SmiMI CAYNNNNRTG 4 cut(s) 522, 1464, 1745, 1976
SmlI CTYRAG 5 cut(s) 311, 436, 470, 497, 773
SmoI CTYRAG 5 cut(s) 311, 436, 470, 497, 773
SsiI CCGC 4 cut(s) 220, 609, 1806, 2199
SspMI CTAG 7 cut(s) 243, 462, 564, 1034, 1194, 1848, 2136
StyD4I CCNGG 4 cut(s) 74, 132, 378, 956
StyI CCWWGG 2 cut(s) 1108, 2168
TaaI ACNGT 5 cut(s) 98, 554, 1242, 1904, 2226
TaqI TCGA 4 cut(s) 101, 284, 1524, 1911
TaqII GACCGA 1 cut(s) 650
TatI WGTACW 4 cut(s) 279, 885, 1242, 2368
TfiI GAWTC 4 cut(s) 605, 701, 2039, 2121
TscAI CASTG 3 cut(s) 517, 970, 1989
TseFI GTSAC 2 cut(s) 364, 1057
TseI GCWGC 2 cut(s) 371, 1991
Tsp45I GTSAC 2 cut(s) 364, 1057
TspGWI ACGGA 2 cut(s) 503, 824
TspRI CASTG 3 cut(s) 517, 970, 1989
Van91I CCANNNNNTGG 1 cut(s) 1411
Vha464I CTTAAG 2 cut(s) 497, 773
VpaK11BI GGWCC 2 cut(s) 748, 1569
VspI ATTAAT 2 cut(s) 1178, 1481
XapI RAATTY 8 cut(s) 796, 848, 1358, 1422, 1560, 1619, 1661, 2070
XbaI TCTAGA 2 cut(s) 1193, 1847
XceI RCATGY 3 cut(s) 480, 583, 1189
XmiI GTMKAC 2 cut(s) 629, 2162
XmnI GAANNNNTTC 1 cut(s) 449
XspI CTAG 7 cut(s) 243, 462, 564, 1034, 1194, 1848, 2136
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.