RchiOBHm_Chr6g0291551

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0016760
Physical Location & Seq
Forward (+)
54647481 .. 54651414
3934 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26160

Sequence Viewer

Length: 2256 bp
ATGACTAAGAAGAGTGGTAATTTGATAGCGGAACTTCCGATTGAGCATCAAATTTACGAGCTAGTTAATGATGCGGGGTCAAGGGGGGTCATGGTGTTTAAGGTTGCAGAGAGGCTGGGAATTGATAGGAAAGAGAATAGGAAGAGGATTGAAAGTTTGTGCTCCAAGTTTGGGATGATAATGGATAAAGAGAAATGCGGAAAGACCAAAGTGTATCGAGTTTGGGCACCTGGGAAACGTAATGCTGAATCAGCTAATGCAATTCTGAATGAGTCTGAAAATGTTACTCAAAGTAAATTTAATGAAGATGTTCTTCGTGGGTCCGTTCAGAAAGGTGATACAGCAATAAATGATGTCTCATCAGGAATGCCACCTGCTGTGGAATGTGCTAGGCCCAGAAGGGGAAAAAGTGTACTTGAACCATCACAGGATAAAGGGGATGAACGTCAATCTCTGGGAATTAGAAGCCCTTTGCAGAAAAGAAAGAGATCTTCTGAAGCAGCTTCTGTAAAGTTTATAGAAGTTGATGGTGTAACTGAGCACCAACCTGGACCAAATGAAGATGGTGAGGCGAGGTGTGCTTTATCAAAGTCAAAATCAACATGTCAAAGAAGGTTTTTATGGACAGAGGAGACTGATAGGCAATTAGTTATCCAATATGTAAGACAGTGTGCAACTCTTGGGACAAAATATCATCACCAGATAAATTGGGCTTCACTTTCTGACCTTCCAGCGCCTCCAAGTACCTGCAAAAGAAGAATGTCATATCTGAAGCTCAGTAATGGAAAATTTAGAAAATCTTTAATGACACTGTGTAACATGCTCAGTAAACGGTATGTAAAGCTCCTGCAGAAAACCCAGAACAGGCCATTTTACCAAGATGATTGTGGATCACTTTTGCAAGGTTCAACAGAGGAGGGTTGTAAACAGAATTATCCTCTCAGTGACCATGGGACAGGTCTTCAGGAAGAACAATGGGATGACTTTAATGACAAAAATATTAAAGAAGTGCTTGGTCAGATACTTCACTATGTGAGGTTGACTAAATCTGTTGCCTCCAAAAGATGTGGAGATTCCTGCGAGGAGGGTTCAGAACTCAATGCTAATGCTGAAGATGTTGGAGGCAGTGATTGTGAACCTTTGTCTCTCTCACCTCAGGTCTTCCCCAATATTTGCAAGTCACCATTTCCAACTGATTCTGGCAAGAGAGCTGCCAAATTTGCTCATTGGCTCCACAAAAGAGATAGAGATCTTATGGGAAGGGGGCTTGATCTTCCTACAGATATACAGTGTGGTGAATTTTTTCATATGTTTGCTCTAGTTTTTTCAGGTGAATTGTCAATCTCCCCATGCTTGCCAGATGGAGTGGGAGAAGCAGAAGATTTGAGAAGCTCAAAACATAAAATTGGTAGGAATAAACATTCGGATGCTAAAAGACTAAAATCCTTGGTTGCAGAAAGTGAGATTATTTCCCGTCGAGAAAAAGGTTTCCCGGGTCTCATGGTATCTATATGTCGTACAGCATCTTCTAAAGCCTATTGTGAAAATTTGTTCAAAGATGATGATACTCTAGGTGGTGACAAACATTTTGGTGAAAATTATCAGCAAGACAGTACTTCAGGTGTGAATCAGATGAGAGAAAACCTCAATTCAGGCATTGTTATCCCTGTGGCAGAGACTTGTAGTGAGTCACCTGGCGGAGGTATCCTCCATCCTGGAAATTGTGATATTATTGGAACTCTTTTGATAGGGAAAACAAATATGAATGTTAATGATGCCCATAATGTGACTATTCTTAATTCTCCTAAAGAGGTTGATGAGCGTCTGTCTGAAAAACTAACTAGCGGTGTGGAAGGTAAAGTTATCTCACCTAGAGGAGATTTTGATGAATGTTCTAAACTCTCTTCTGATGAATTATGCGTACCACTTCATCCTTGGATAAATGGGGACGAGACCATCAACAAGACTATCTACAAGGGGTTCATGCAACGTGTTTTTGGGATTGTGATGCAAAACCCCGGGATATTAGAGGGTGAAATTATCCGTAAGATGGATGTACTGAATCCGCAGAGTTGTAGAAAATTGTTGGTGGAGATGATTGAAGCAAAACATCTTCATGTCAGGACAATGCGCCAAGCCACATTGAATGCCCCCCCAGCATTTCTAGGGAACCTGTTTGGAAGCAGCCTCACCCAATCAAAGGTGGTTTTCCGTAGGCATCTCTTTGCAAATTCCATGAGCGCGTTCTTGCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B-block_TFIIIC

Protein Analysis

751

Amino Acids

83.58

Weight (kDa)

8.46

Isoelectric Point (pI)

50.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7646 PF24657 7 - 83 4.1e-28 Domain of unknown function (DUF7646)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016760)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g23920 FvH4_2g23920
malus_domestica MD11G1308600.v1.1
prunus_persica Prupe.8G262800_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0291551
rosa_laevigata RLG00000012108
rosa_multiflora Rmu_sc0002226.1_g000002
rosa_roxburghii Rroxscaffold_7G00175980
rosa_rugosa Rorug06G0220200
rosa_samantha Rh6AG332400 Rh6BG339300 Rh6CG345600 Rh6DG332900
rosa_wichuraiana Rw6G028870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 382
Acc36I ACCTGC 2 cut(s) 382, 755
AccB1I GGYRCC 1 cut(s) 226
AccII CGCG 1 cut(s) 2243
AciI CCGC 6 cut(s) 29, 74, 198, 1698, 1845, 2066
AclWI GGATC 1 cut(s) 898
AcsI RAATTY 7 cut(s) 51, 296, 788, 1217, 1298, 1546, 2230
AcuI CTGAAG 5 cut(s) 516, 791, 947, 1131, 1602
AdeI CACNNNGTG 1 cut(s) 1033
AfaI GTAC 6 cut(s) 414, 745, 1519, 1615, 1923, 2058
AfiI CCNNNNNNNGG 6 cut(s) 171, 401, 864, 1700, 2050, 2200
AflIII ACRYGT 2 cut(s) 602, 1990
AgsI TTSAA 6 cut(s) 152, 419, 909, 1555, 2102, 2146
AjnI CCWGG 4 cut(s) 229, 547, 1693, 1714
AluBI AGCT 7 cut(s) 61, 254, 503, 775, 844, 1211, 1392
AluI AGCT 7 cut(s) 61, 254, 503, 775, 844, 1211, 1392
Alw21I GWGCWC 2 cut(s) 164, 543
Alw26I GTCTC 6 cut(s) 361, 626, 1149, 1502, 1670, 1946
AlwI GGATC 1 cut(s) 898
AlwNI CAGNNNCTG 1 cut(s) 506
Ama87I CYCGRG 2 cut(s) 1492, 2018
AoxI GGCC 2 cut(s) 392, 866
ApeKI GCWGC 3 cut(s) 500, 1211, 2184
ApoI RAATTY 7 cut(s) 51, 296, 788, 1217, 1298, 1546, 2230
ArsI GACNNNNNNTTYG 2 cut(s) 1571, 1603
Asp700I GAANNNNTTC 2 cut(s) 309, 1302
AspLEI GCGC 3 cut(s) 736, 2133, 2243
AspS9I GGNCC 3 cut(s) 321, 393, 551
AsuC2I CCSGG 4 cut(s) 1493, 1494, 2019, 2020
AvaI CYCGRG 2 cut(s) 1492, 2018
AvaII GGWCC 2 cut(s) 321, 551
AxyI CCTNAGG 1 cut(s) 1155
BaeGI GKGCMC 1 cut(s) 229
BanI GGYRCC 1 cut(s) 226
BarI GAAGNNNNNNTAC 2 cut(s) 1510, 1542
BbsI GAAGAC 2 cut(s) 953, 1153
Bbv12I GWGCWC 2 cut(s) 164, 543
BbvI GCAGC 3 cut(s) 512, 1198, 2196
BccI CCATC 7 cut(s) 430, 521, 557, 1355, 1719, 1964, 2044
BciT130I CCWGG 4 cut(s) 231, 549, 1695, 1716
BciVI GTATCC 1 cut(s) 1715
BcnI CCSGG 4 cut(s) 1493, 1494, 2019, 2020
BcoDI GTCTC 6 cut(s) 361, 626, 1149, 1502, 1670, 1946
BfaI CTAG 7 cut(s) 62, 390, 1319, 1571, 1842, 1872, 2165
BfmI CTRYAG 3 cut(s) 848, 1278, 2252
BfoI RGCGCY 1 cut(s) 737
BfuAI ACCTGC 2 cut(s) 382, 755
BfuI GTATCC 1 cut(s) 1715
BglII AGATCT 2 cut(s) 488, 1249
BisI GCNGC 3 cut(s) 501, 1212, 2185
BlsI GCNGC 3 cut(s) 502, 1213, 2186
BmcAI AGTACT 1 cut(s) 1615
Bme1390I CCNGG 8 cut(s) 231, 549, 1493, 1494, 1695, 1716, 2019, 2020
Bme18I GGWCC 2 cut(s) 321, 551
BmeT110I CYCGRG 2 cut(s) 1492, 2018
BmgT120I GGNCC 3 cut(s) 321, 393, 551
BmiI GGNNCC 4 cut(s) 228, 322, 1232, 2171
BmrFI CCNGG 8 cut(s) 231, 549, 1493, 1494, 1695, 1716, 2019, 2020
BmsI GCATC 7 cut(s) 55, 61, 1417, 1532, 1765, 1998, 2227
BpiI GAAGAC 2 cut(s) 953, 1153
BplI GAGNNNNNCTC 4 cut(s) 1629, 1661, 1692, 1724
BpuMI CCSGG 4 cut(s) 1493, 1494, 2019, 2020
BsaBI GATNNNNATC 1 cut(s) 1248
BsaI GGTCTC 2 cut(s) 1502, 1946
BsaJI CCNNGG 7 cut(s) 230, 949, 1446, 1492, 1934, 2017, 2018
Bsc4I CCNNNNNNNGG 6 cut(s) 171, 401, 864, 1700, 2050, 2200
Bse21I CCTNAGG 1 cut(s) 1155
Bse8I GATNNNNATC 1 cut(s) 1248
BseBI CCWGG 4 cut(s) 231, 549, 1695, 1716
BseDI CCNNGG 7 cut(s) 230, 949, 1446, 1492, 1934, 2017, 2018
BseGI GGATG 7 cut(s) 180, 445, 985, 1432, 1711, 1930, 2059
BseJI GATNNNNATC 1 cut(s) 1248
BseLI CCNNNNNNNGG 6 cut(s) 171, 401, 864, 1700, 2050, 2200
BseMII CTCAG 5 cut(s) 528, 790, 838, 955, 1169
BseRI GAGGAG 4 cut(s) 644, 929, 1097, 1890
BseSI GKGCMC 1 cut(s) 229
BseXI GCAGC 3 cut(s) 512, 1198, 2196
BseYI CCCAGC 2 cut(s) 115, 2155
Bsh1236I CGCG 1 cut(s) 2243
BshFI GGCC 2 cut(s) 394, 868
BshNI GGYRCC 1 cut(s) 226
BsiHKAI GWGCWC 2 cut(s) 164, 543
BsiHKCI CYCGRG 2 cut(s) 1492, 2018
BsiSI CCGG 2 cut(s) 1493, 2019
BslFI GGGAC 3 cut(s) 697, 967, 1961
BslI CCNNNNNNNGG 6 cut(s) 171, 401, 864, 1700, 2050, 2200
BsmAI GTCTC 6 cut(s) 361, 626, 1149, 1502, 1670, 1946
BsmFI GGGAC 3 cut(s) 697, 967, 1961
BsmI GAATGC 2 cut(s) 372, 2152
BsnI GGCC 2 cut(s) 394, 868
Bso31I GGTCTC 2 cut(s) 1502, 1946
BsoBI CYCGRG 2 cut(s) 1492, 2018
Bsp1286I GDGCHC 3 cut(s) 164, 229, 543
Bsp143I GATC 4 cut(s) 488, 890, 1249, 1270
Bsp19I CCATGG 1 cut(s) 949
BspACI CCGC 6 cut(s) 29, 74, 198, 1698, 1845, 2066
BspANI GGCC 2 cut(s) 394, 868
BspCNI CTCAG 5 cut(s) 529, 789, 837, 954, 1168
BspFNI CGCG 1 cut(s) 2243
BspLI GGNNCC 4 cut(s) 228, 322, 1232, 2171
BspMAI CTGCAG 1 cut(s) 852
BspMI ACCTGC 2 cut(s) 382, 755
BspPI GGATC 1 cut(s) 898
BspT107I GGYRCC 1 cut(s) 226
BspTNI GGTCTC 2 cut(s) 1502, 1946
BssECI CCNNGG 7 cut(s) 230, 949, 1446, 1492, 1934, 2017, 2018
BssMI GATC 4 cut(s) 488, 890, 1249, 1270
BssT1I CCWWGG 3 cut(s) 949, 1446, 1934
Bst2UI CCWGG 4 cut(s) 231, 549, 1695, 1716
Bst4CI ACNGT 5 cut(s) 669, 813, 834, 1290, 1613
Bst6I CTCTTC 3 cut(s) 5, 137, 1909
BstC8I GCNNGC 1 cut(s) 1355
BstDEI CTNAG 6 cut(s) 6, 537, 776, 824, 941, 1155
BstDSI CCRYGG 1 cut(s) 949
BstENI CCTNNNNNAGG 1 cut(s) 1698
BstF5I GGATG 7 cut(s) 180, 445, 985, 1432, 1711, 1930, 2059
BstFNI CGCG 1 cut(s) 2243
BstH2I RGCGCY 1 cut(s) 737
BstHHI GCGC 3 cut(s) 736, 2133, 2243
BstKTI GATC 4 cut(s) 491, 893, 1252, 1273
BstMAI GTCTC 6 cut(s) 361, 626, 1149, 1502, 1670, 1946
BstMBI GATC 4 cut(s) 488, 890, 1249, 1270
BstMWI GCNNNNNNNGC 4 cut(s) 251, 578, 1220, 2156
BstNI CCWGG 4 cut(s) 231, 549, 1695, 1716
BstNSI RCATGY 2 cut(s) 606, 823
BstSCI CCNGG 8 cut(s) 229, 547, 1491, 1492, 1693, 1714, 2017, 2018
BstSFI CTRYAG 3 cut(s) 848, 1278, 2252
BstSLI GKGCMC 1 cut(s) 229
BstUI CGCG 1 cut(s) 2243
BstV1I GCAGC 3 cut(s) 512, 1198, 2196
BstV2I GAAGAC 2 cut(s) 953, 1153
BstX2I RGATCY 2 cut(s) 488, 1249
BstYI RGATCY 2 cut(s) 488, 1249
Bsu36I CCTNAGG 1 cut(s) 1155
BsuI GTATCC 1 cut(s) 1715
BsuRI GGCC 2 cut(s) 394, 868
BtgI CCRYGG 1 cut(s) 949
BtsCI GGATG 7 cut(s) 180, 445, 985, 1432, 1711, 1930, 2059
BtsI GCAGTG 1 cut(s) 1132
BtsIMutI CAGTG 5 cut(s) 674, 809, 949, 1132, 1295
BveI ACCTGC 2 cut(s) 382, 755
Cac8I GCNNGC 1 cut(s) 1355
CaiI CAGNNNCTG 1 cut(s) 506
CfoI GCGC 3 cut(s) 736, 2133, 2243
Cfr13I GGNCC 3 cut(s) 321, 393, 551
Cfr9I CCCGGG 2 cut(s) 1492, 2018
CseI GACGC 1 cut(s) 1811
Csp6I GTAC 6 cut(s) 413, 744, 1518, 1614, 1922, 2057
CspCI CAANNNNNGTGG 2 cut(s) 1048, 1083
CviAII CATG 9 cut(s) 91, 603, 820, 950, 1350, 1501, 1984, 2117, 2236
CviQI GTAC 6 cut(s) 413, 744, 1518, 1614, 1922, 2057
DdeI CTNAG 6 cut(s) 6, 537, 776, 824, 941, 1155
DpnI GATC 4 cut(s) 490, 892, 1251, 1272
DpnII GATC 4 cut(s) 488, 890, 1249, 1270
DraIII CACNNNGTG 1 cut(s) 1033
Eam1104I CTCTTC 3 cut(s) 5, 137, 1909
EarI CTCTTC 3 cut(s) 5, 137, 1909
EciI GGCGGA 1 cut(s) 1713
Eco130I CCWWGG 3 cut(s) 949, 1446, 1934
Eco31I GGTCTC 2 cut(s) 1502, 1946
Eco47I GGWCC 2 cut(s) 321, 551
Eco57I CTGAAG 5 cut(s) 516, 791, 947, 1131, 1602
Eco81I CCTNAGG 1 cut(s) 1155
Eco88I CYCGRG 2 cut(s) 1492, 2018
EcoNI CCTNNNNNAGG 1 cut(s) 1698
EcoRII CCWGG 4 cut(s) 229, 547, 1693, 1714
EcoT14I CCWWGG 3 cut(s) 949, 1446, 1934
ErhI CCWWGG 3 cut(s) 949, 1446, 1934
FaeI CATG 9 cut(s) 94, 606, 823, 953, 1353, 1504, 1987, 2120, 2239
FalI AAGNNNNNCTT 4 cut(s) 297, 329, 996, 1028
FaqI GGGAC 3 cut(s) 697, 967, 1961
FatI CATG 9 cut(s) 90, 602, 819, 949, 1349, 1500, 1983, 2116, 2235
FauI CCCGC 1 cut(s) 67
FauNDI CATATG 1 cut(s) 1308
Fnu4HI GCNGC 3 cut(s) 501, 1212, 2185
FokI GGATG 7 cut(s) 187, 452, 992, 1439, 1698, 1917, 2066
Fsp4HI GCNGC 3 cut(s) 501, 1212, 2185
FspBI CTAG 7 cut(s) 62, 390, 1319, 1571, 1842, 1872, 2165
GlaI GCGC 3 cut(s) 735, 2132, 2242
GluI GCNGC 3 cut(s) 501, 1212, 2185
GsaI CCCAGC 2 cut(s) 119, 2159
HaeII RGCGCY 1 cut(s) 737
HaeIII GGCC 2 cut(s) 394, 868
HapII CCGG 2 cut(s) 1493, 2019
HgaI GACGC 1 cut(s) 1811
HhaI GCGC 3 cut(s) 736, 2133, 2243
Hin1II CATG 9 cut(s) 94, 606, 823, 953, 1353, 1504, 1987, 2120, 2239
Hin6I GCGC 3 cut(s) 734, 2131, 2241
HinP1I GCGC 3 cut(s) 734, 2131, 2241
HincII GTYRAC 1 cut(s) 1041
HindII GTYRAC 1 cut(s) 1041
HinfI GANTC 7 cut(s) 248, 272, 1073, 1196, 1627, 1688, 2062
HpaII CCGG 2 cut(s) 1493, 2019
Hpy166II GTNNAC 5 cut(s) 413, 830, 926, 1041, 1136
Hpy188III TCNNGA 4 cut(s) 363, 965, 1478, 2122
Hpy8I GTNNAC 5 cut(s) 413, 830, 926, 1041, 1136
Hpy99I CGWCG 1 cut(s) 1479
HpyAV CCTTC 5 cut(s) 393, 606, 737, 1254, 1847
HpyCH4III ACNGT 5 cut(s) 669, 813, 834, 1290, 1613
HpyCH4IV ACGT 3 cut(s) 238, 445, 1990
HpyF10VI GCNNNNNNNGC 4 cut(s) 251, 578, 1220, 2156
HpyF3I CTNAG 6 cut(s) 6, 537, 776, 824, 941, 1155
HpySE526I ACGT 3 cut(s) 238, 445, 1990
Hsp92II CATG 9 cut(s) 94, 606, 823, 953, 1353, 1504, 1987, 2120, 2239
HspAI GCGC 3 cut(s) 734, 2131, 2241
Kzo9I GATC 4 cut(s) 488, 890, 1249, 1270
LmnI GCTCC 3 cut(s) 167, 849, 1236
Lsp1109I GCAGC 3 cut(s) 512, 1198, 2196
LweI GCATC 7 cut(s) 55, 61, 1417, 1532, 1765, 1998, 2227
MaeI CTAG 7 cut(s) 62, 390, 1319, 1571, 1842, 1872, 2165
MaeII ACGT 3 cut(s) 238, 445, 1990
MaeIII GTNAC 8 cut(s) 283, 532, 815, 944, 1179, 1577, 1689, 1786
MalI GATC 4 cut(s) 490, 892, 1251, 1272
MboI GATC 4 cut(s) 488, 890, 1249, 1270
MflI RGATCY 2 cut(s) 488, 1249
MhlI GDGCHC 3 cut(s) 164, 229, 543
MlyI GAGTC 2 cut(s) 281, 1697
MmeI TCCRAC 2 cut(s) 1099, 1214
MroXI GAANNNNTTC 2 cut(s) 309, 1302
MseI TTAA 8 cut(s) 66, 99, 300, 803, 987, 1002, 1770, 1797
MslI CAYNNNNRTG 3 cut(s) 1425, 1590, 2115
MspI CCGG 2 cut(s) 1493, 2019
MspR9I CCNGG 8 cut(s) 231, 549, 1493, 1494, 1695, 1716, 2019, 2020
Mva1269I GAATGC 2 cut(s) 372, 2152
MvaI CCWGG 4 cut(s) 231, 549, 1695, 1716
MvnI CGCG 1 cut(s) 2243
MwoI GCNNNNNNNGC 4 cut(s) 251, 578, 1220, 2156
NciI CCSGG 4 cut(s) 1493, 1494, 2019, 2020
NcoI CCATGG 1 cut(s) 949
NdeI CATATG 1 cut(s) 1308
NdeII GATC 4 cut(s) 488, 890, 1249, 1270
NlaIII CATG 9 cut(s) 94, 606, 823, 953, 1353, 1504, 1987, 2120, 2239
NlaIV GGNNCC 4 cut(s) 228, 322, 1232, 2171
NmuCI GTSAC 5 cut(s) 944, 1179, 1577, 1689, 1786
NspI RCATGY 2 cut(s) 606, 823
PaqCI CACCTGC 1 cut(s) 382
PciI ACATGT 1 cut(s) 602
PctI GAATGC 2 cut(s) 372, 2152
PdmI GAANNNNTTC 2 cut(s) 309, 1302
PfeI GAWTC 5 cut(s) 248, 1073, 1196, 1627, 2062
PfoI TCCNGGA 1 cut(s) 1714
PkrI GCNGC 3 cut(s) 502, 1213, 2186
PleI GAGTC 2 cut(s) 280, 1696
PpsI GAGTC 2 cut(s) 280, 1696
PscI ACATGT 1 cut(s) 602
Psp6I CCWGG 4 cut(s) 229, 547, 1693, 1714
PspFI CCCAGC 2 cut(s) 115, 2155
PspGI CCWGG 4 cut(s) 229, 547, 1693, 1714
PspN4I GGNNCC 4 cut(s) 228, 322, 1232, 2171
PspPI GGNCC 3 cut(s) 321, 393, 551
PstI CTGCAG 1 cut(s) 852
PstNI CAGNNNCTG 1 cut(s) 506
PsuI RGATCY 2 cut(s) 488, 1249
RsaI GTAC 6 cut(s) 414, 745, 1519, 1615, 1923, 2058
RsaNI GTAC 6 cut(s) 413, 744, 1518, 1614, 1922, 2057
RseI CAYNNNNRTG 3 cut(s) 1425, 1590, 2115
SaqAI TTAA 8 cut(s) 66, 99, 300, 803, 987, 1002, 1770, 1797
SatI GCNGC 3 cut(s) 501, 1212, 2185
Sau3AI GATC 4 cut(s) 488, 890, 1249, 1270
Sau96I GGNCC 3 cut(s) 321, 393, 551
ScaI AGTACT 1 cut(s) 1615
SchI GAGTC 2 cut(s) 281, 1697
ScrFI CCNGG 8 cut(s) 231, 549, 1493, 1494, 1695, 1716, 2019, 2020
SduI GDGCHC 3 cut(s) 164, 229, 543
SfaNI GCATC 7 cut(s) 55, 61, 1417, 1532, 1765, 1998, 2227
SfcI CTRYAG 3 cut(s) 848, 1278, 2252
SinI GGWCC 2 cut(s) 321, 551
SmaI CCCGGG 2 cut(s) 1494, 2020
SmiMI CAYNNNNRTG 3 cut(s) 1425, 1590, 2115
SsiI CCGC 6 cut(s) 29, 74, 198, 1698, 1845, 2066
SspI AATATT 2 cut(s) 1000, 1171
SspMI CTAG 7 cut(s) 62, 390, 1319, 1571, 1842, 1872, 2165
StyD4I CCNGG 8 cut(s) 229, 547, 1491, 1492, 1693, 1714, 2017, 2018
StyI CCWWGG 3 cut(s) 949, 1446, 1934
TaaI ACNGT 5 cut(s) 669, 813, 834, 1290, 1613
TaiI ACGT 3 cut(s) 241, 448, 1993
TaqI TCGA 2 cut(s) 217, 1477
TatI WGTACW 3 cut(s) 412, 1613, 2056
TfiI GAWTC 5 cut(s) 248, 1073, 1196, 1627, 2062
Tru1I TTAA 8 cut(s) 66, 99, 300, 803, 987, 1002, 1770, 1797
Tru9I TTAA 8 cut(s) 66, 99, 300, 803, 987, 1002, 1770, 1797
TscAI CASTG 5 cut(s) 674, 816, 949, 1132, 1295
TseFI GTSAC 5 cut(s) 944, 1179, 1577, 1689, 1786
TseI GCWGC 3 cut(s) 500, 1211, 2184
Tsp45I GTSAC 5 cut(s) 944, 1179, 1577, 1689, 1786
TspGWI ACGGA 3 cut(s) 313, 2033, 2201
TspMI CCCGGG 2 cut(s) 1492, 2018
TspRI CASTG 5 cut(s) 674, 816, 949, 1132, 1295
VpaK11BI GGWCC 2 cut(s) 321, 551
XagI CCTNNNNNAGG 1 cut(s) 1698
XapI RAATTY 7 cut(s) 51, 296, 788, 1217, 1298, 1546, 2230
XceI RCATGY 2 cut(s) 606, 823
XcmI CCANNNNNNNNNTGG 2 cut(s) 884, 1932
XmaI CCCGGG 2 cut(s) 1492, 2018
XmnI GAANNNNTTC 2 cut(s) 309, 1302
XspI CTAG 7 cut(s) 62, 390, 1319, 1571, 1842, 1872, 2165
ZrmI AGTACT 1 cut(s) 1615
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.