Rh6CG345600

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0016760
Physical Location & Seq
Forward (+)
53621315 .. 53624893
3579 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG345600.1

Sequence Viewer

Length: 2256 bp
ATGACTAAGAAGAGTGGTAATTTGATAGCGGAACTTCCGATTGAGCATCAAATTTACGAGCTAGTTAATGATGCGGGGTCAAGGGGGGTCATGGTGTTTAAGGTTGCAGAGAGGCTGGGAATTGATAGGAAAGAGAATAGGAAGAGGATTGAAAGTTTGTGCTCCAAGTTTGGGATGATAATGGATAAAGAGAAATGCGGAAAGACCAAAGTGTATCGAGTTTGGGCACCTGGGAAACGTAATGCTGAATCAGCTAATGCAATTCTGAATGAGTCTGAAAATGTTACTCAAAGTAAATTTAATGAAGATGTTCTTCGTGGGTCCGTTCAGAAAGGTGATACAGCAATAAATGATGTCTCATCAGGAATGCCACCTGCTGTGGAATGTGCTAGGCCCAGAAGGGGAAAAAGTGTACTTGAACCATCACAGGATAAAGGGGATGAACGTCAATCTCTGGGAATTAGAAGCCCTTTGCAGAAAAGAAAGAGATCTTCTGAAGCAGCTTCTGTAAAGTTTATAGAAGTTGATGGTGTAACTGAGCACCAACCTGGACCAAATGAAGATGGTGAGGCGAGGTGTGCTTTATCAAAGTCAAAATCAACATGTCAAAGAAGGTTTTTATGGACAGAGGAGACTGATAGGCAATTAGTTATCCAATATGTAAGACAGTGTGCAACTCTTGGGACAAAATATCATCACCAGATAAATTGGGCTTCACTTTCTGACCTTCCAGCGCCTCCAAGTACCTGCAAAAGAAGAATGTCATATCTGAAGCTCAGTAATGGAAAATTTAGAAAATCTTTAATGACACTGTGTAACATGCTCAGTAAACGGTATGTAAAGCTCCTGCAGAAAACCCAGAACAGGCCATTTTACCAAGATGATTGTGGATCACTTTTGCAAGGTTCAACAGAGGAGGGTTGTAAACAGAATTATCCTCTCAGTGACCATGGGACAGGTCTTCAGGAAGAACAATGGGATGACTTTAATGACAAAAATATTAAAGAAGTGCTTGGTCAGATACTTCACTATGTGAGGTTGACTAAATCTGTTGCCTCCAAAAGATGTGGAGATTCCTGCGAGGAGGGTTCAGAACTCAATGCTAATGCTGAAGATGTTGGAGGCAGTGATTGTGAACCTTTGTCTCTCTCACCTCAGGTCTTCCCCAATATTTGCAAGTCACCATTTCCAACTGATTCTGGCAAGAGAGCTGCCAAATTTGCTCATTGGCTCCACAAAAGAGATAGAGATCTTATGGGAAGGGGGCTTGATCTTCCTACAGATATACAGTGTGGTGAATTTTTTCATATGTTTGCTCTAGTTTTTTCAGGTGAATTGTCAATCTCCCCATGCTTGCCAGATGGAGTGGGAGAAGCAGAAGATTTGAGAAGCTCAAAACATAAAATTGGTAGGAATAAACATTCGGATGCTAAAAGACTAAAATCCTTGGTTGCAGAAAGTGAGATTATTTCCCGTCGAGAAAAAGGTTTCCCGGGTCTCATGGTATCTATATGTCGTACAGCATCTTCTAAAGCCTATTGTGAAAATTTGTTCAAAGATGATGATACTCTAGGTGGTGACAAACATTTTGGTGAAAATTATCAGCAAGACAGTACTTCAGGTGTGAATCAGATGAGAGAAAACCTCAATTCAGGCATTGTTATCCCTGTGGCAGAGACTTGTAGTGAGTCACCTGGCGGAGGTATCCTCCATCCTGGAAATTGTGATATTATTGGAACTCTTTTGATAGGGAAAACAAATATGAATGTTAATGATGCCCATAATGTGACTATTCTTAATTCTCCTAAAGAGGTTGATGAGCGTCTGTCTGAAAAACTAACTAGCGGTGTGGAAGGTAAAGTTATCTCACCTAGAGGAGATTTTGATGAATGTTCTAAACTCTCTTCTGATGAATTATGCGTACCACTTCATCCTTGGATAAATGGGGACGAGACCATCAACAAGACTATCTACAAGGGGTTCATGCAACGTGTTTTTGGGATTGTGATGCAAAACCCCGGGATATTAGAGGGTGAAATTATCCGTAAGATGGATGTACTGAATCCGCAGAGTTGTAGAAAATTGTTGGTGGAGATGATTGAAGCAAAACATCTTCATGTCAGGACAATGCGCCAAGCCACATTGAATGCCCCCCCAGCATTTCTAGGGAACCTGTTTGGAAGCAGCCTCACCCAATCAAAGGTGGTTTTCCGTAGGCATCTCTTTGCAAATTCCATGAGCGCGTTCTTGCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B-block_TFIIIC

Protein Analysis

751

Amino Acids

83.58

Weight (kDa)

8.46

Isoelectric Point (pI)

50.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7646 PF24657 7 - 83 4.1e-28 Domain of unknown function (DUF7646)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016760)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g23920 FvH4_2g23920
malus_domestica MD11G1308600.v1.1
prunus_persica Prupe.8G262800_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0291551
rosa_laevigata RLG00000012108
rosa_multiflora Rmu_sc0002226.1_g000002
rosa_roxburghii Rroxscaffold_7G00175980
rosa_rugosa Rorug06G0220200
rosa_samantha Rh6AG332400 Rh6BG339300 Rh6CG345600 Rh6DG332900
rosa_wichuraiana Rw6G028870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 382
Acc36I ACCTGC 2 cut(s) 382, 755
AccB1I GGYRCC 1 cut(s) 226
AccII CGCG 1 cut(s) 2243
AciI CCGC 6 cut(s) 29, 74, 198, 1698, 1845, 2066
AclWI GGATC 1 cut(s) 898
AcsI RAATTY 7 cut(s) 51, 296, 788, 1217, 1298, 1546, 2230
AcuI CTGAAG 5 cut(s) 516, 791, 947, 1131, 1602
AdeI CACNNNGTG 1 cut(s) 1033
AfaI GTAC 6 cut(s) 414, 745, 1519, 1615, 1923, 2058
AfiI CCNNNNNNNGG 6 cut(s) 171, 401, 864, 1700, 2050, 2200
AflIII ACRYGT 2 cut(s) 602, 1990
AgsI TTSAA 6 cut(s) 152, 419, 909, 1555, 2102, 2146
AjnI CCWGG 4 cut(s) 229, 547, 1693, 1714
AluBI AGCT 7 cut(s) 61, 254, 503, 775, 844, 1211, 1392
AluI AGCT 7 cut(s) 61, 254, 503, 775, 844, 1211, 1392
Alw21I GWGCWC 2 cut(s) 164, 543
Alw26I GTCTC 6 cut(s) 361, 626, 1149, 1502, 1670, 1946
AlwI GGATC 1 cut(s) 898
AlwNI CAGNNNCTG 1 cut(s) 506
Ama87I CYCGRG 2 cut(s) 1492, 2018
AoxI GGCC 2 cut(s) 392, 866
ApeKI GCWGC 3 cut(s) 500, 1211, 2184
ApoI RAATTY 7 cut(s) 51, 296, 788, 1217, 1298, 1546, 2230
ArsI GACNNNNNNTTYG 2 cut(s) 1571, 1603
Asp700I GAANNNNTTC 2 cut(s) 309, 1302
AspLEI GCGC 3 cut(s) 736, 2133, 2243
AspS9I GGNCC 3 cut(s) 321, 393, 551
AsuC2I CCSGG 4 cut(s) 1493, 1494, 2019, 2020
AvaI CYCGRG 2 cut(s) 1492, 2018
AvaII GGWCC 2 cut(s) 321, 551
AxyI CCTNAGG 1 cut(s) 1155
BaeGI GKGCMC 1 cut(s) 229
BanI GGYRCC 1 cut(s) 226
BarI GAAGNNNNNNTAC 2 cut(s) 1510, 1542
BbsI GAAGAC 2 cut(s) 953, 1153
Bbv12I GWGCWC 2 cut(s) 164, 543
BbvI GCAGC 3 cut(s) 512, 1198, 2196
BccI CCATC 7 cut(s) 430, 521, 557, 1355, 1719, 1964, 2044
BciT130I CCWGG 4 cut(s) 231, 549, 1695, 1716
BciVI GTATCC 1 cut(s) 1715
BcnI CCSGG 4 cut(s) 1493, 1494, 2019, 2020
BcoDI GTCTC 6 cut(s) 361, 626, 1149, 1502, 1670, 1946
BfaI CTAG 7 cut(s) 62, 390, 1319, 1571, 1842, 1872, 2165
BfmI CTRYAG 3 cut(s) 848, 1278, 2252
BfoI RGCGCY 1 cut(s) 737
BfuAI ACCTGC 2 cut(s) 382, 755
BfuI GTATCC 1 cut(s) 1715
BglII AGATCT 2 cut(s) 488, 1249
BisI GCNGC 3 cut(s) 501, 1212, 2185
BlsI GCNGC 3 cut(s) 502, 1213, 2186
BmcAI AGTACT 1 cut(s) 1615
Bme1390I CCNGG 8 cut(s) 231, 549, 1493, 1494, 1695, 1716, 2019, 2020
Bme18I GGWCC 2 cut(s) 321, 551
BmeT110I CYCGRG 2 cut(s) 1492, 2018
BmgT120I GGNCC 3 cut(s) 321, 393, 551
BmiI GGNNCC 4 cut(s) 228, 322, 1232, 2171
BmrFI CCNGG 8 cut(s) 231, 549, 1493, 1494, 1695, 1716, 2019, 2020
BmsI GCATC 7 cut(s) 55, 61, 1417, 1532, 1765, 1998, 2227
BpiI GAAGAC 2 cut(s) 953, 1153
BplI GAGNNNNNCTC 4 cut(s) 1629, 1661, 1692, 1724
BpuMI CCSGG 4 cut(s) 1493, 1494, 2019, 2020
BsaBI GATNNNNATC 1 cut(s) 1248
BsaI GGTCTC 2 cut(s) 1502, 1946
BsaJI CCNNGG 7 cut(s) 230, 949, 1446, 1492, 1934, 2017, 2018
Bsc4I CCNNNNNNNGG 6 cut(s) 171, 401, 864, 1700, 2050, 2200
Bse21I CCTNAGG 1 cut(s) 1155
Bse8I GATNNNNATC 1 cut(s) 1248
BseBI CCWGG 4 cut(s) 231, 549, 1695, 1716
BseDI CCNNGG 7 cut(s) 230, 949, 1446, 1492, 1934, 2017, 2018
BseGI GGATG 7 cut(s) 180, 445, 985, 1432, 1711, 1930, 2059
BseJI GATNNNNATC 1 cut(s) 1248
BseLI CCNNNNNNNGG 6 cut(s) 171, 401, 864, 1700, 2050, 2200
BseMII CTCAG 5 cut(s) 528, 790, 838, 955, 1169
BseRI GAGGAG 4 cut(s) 644, 929, 1097, 1890
BseSI GKGCMC 1 cut(s) 229
BseXI GCAGC 3 cut(s) 512, 1198, 2196
BseYI CCCAGC 2 cut(s) 115, 2155
Bsh1236I CGCG 1 cut(s) 2243
BshFI GGCC 2 cut(s) 394, 868
BshNI GGYRCC 1 cut(s) 226
BsiHKAI GWGCWC 2 cut(s) 164, 543
BsiHKCI CYCGRG 2 cut(s) 1492, 2018
BsiSI CCGG 2 cut(s) 1493, 2019
BslFI GGGAC 3 cut(s) 697, 967, 1961
BslI CCNNNNNNNGG 6 cut(s) 171, 401, 864, 1700, 2050, 2200
BsmAI GTCTC 6 cut(s) 361, 626, 1149, 1502, 1670, 1946
BsmFI GGGAC 3 cut(s) 697, 967, 1961
BsmI GAATGC 2 cut(s) 372, 2152
BsnI GGCC 2 cut(s) 394, 868
Bso31I GGTCTC 2 cut(s) 1502, 1946
BsoBI CYCGRG 2 cut(s) 1492, 2018
Bsp1286I GDGCHC 3 cut(s) 164, 229, 543
Bsp143I GATC 4 cut(s) 488, 890, 1249, 1270
Bsp19I CCATGG 1 cut(s) 949
BspACI CCGC 6 cut(s) 29, 74, 198, 1698, 1845, 2066
BspANI GGCC 2 cut(s) 394, 868
BspCNI CTCAG 5 cut(s) 529, 789, 837, 954, 1168
BspFNI CGCG 1 cut(s) 2243
BspLI GGNNCC 4 cut(s) 228, 322, 1232, 2171
BspMAI CTGCAG 1 cut(s) 852
BspMI ACCTGC 2 cut(s) 382, 755
BspPI GGATC 1 cut(s) 898
BspT107I GGYRCC 1 cut(s) 226
BspTNI GGTCTC 2 cut(s) 1502, 1946
BssECI CCNNGG 7 cut(s) 230, 949, 1446, 1492, 1934, 2017, 2018
BssMI GATC 4 cut(s) 488, 890, 1249, 1270
BssT1I CCWWGG 3 cut(s) 949, 1446, 1934
Bst2UI CCWGG 4 cut(s) 231, 549, 1695, 1716
Bst4CI ACNGT 5 cut(s) 669, 813, 834, 1290, 1613
Bst6I CTCTTC 3 cut(s) 5, 137, 1909
BstC8I GCNNGC 1 cut(s) 1355
BstDEI CTNAG 6 cut(s) 6, 537, 776, 824, 941, 1155
BstDSI CCRYGG 1 cut(s) 949
BstENI CCTNNNNNAGG 1 cut(s) 1698
BstF5I GGATG 7 cut(s) 180, 445, 985, 1432, 1711, 1930, 2059
BstFNI CGCG 1 cut(s) 2243
BstH2I RGCGCY 1 cut(s) 737
BstHHI GCGC 3 cut(s) 736, 2133, 2243
BstKTI GATC 4 cut(s) 491, 893, 1252, 1273
BstMAI GTCTC 6 cut(s) 361, 626, 1149, 1502, 1670, 1946
BstMBI GATC 4 cut(s) 488, 890, 1249, 1270
BstMWI GCNNNNNNNGC 4 cut(s) 251, 578, 1220, 2156
BstNI CCWGG 4 cut(s) 231, 549, 1695, 1716
BstNSI RCATGY 2 cut(s) 606, 823
BstSCI CCNGG 8 cut(s) 229, 547, 1491, 1492, 1693, 1714, 2017, 2018
BstSFI CTRYAG 3 cut(s) 848, 1278, 2252
BstSLI GKGCMC 1 cut(s) 229
BstUI CGCG 1 cut(s) 2243
BstV1I GCAGC 3 cut(s) 512, 1198, 2196
BstV2I GAAGAC 2 cut(s) 953, 1153
BstX2I RGATCY 2 cut(s) 488, 1249
BstYI RGATCY 2 cut(s) 488, 1249
Bsu36I CCTNAGG 1 cut(s) 1155
BsuI GTATCC 1 cut(s) 1715
BsuRI GGCC 2 cut(s) 394, 868
BtgI CCRYGG 1 cut(s) 949
BtsCI GGATG 7 cut(s) 180, 445, 985, 1432, 1711, 1930, 2059
BtsI GCAGTG 1 cut(s) 1132
BtsIMutI CAGTG 5 cut(s) 674, 809, 949, 1132, 1295
BveI ACCTGC 2 cut(s) 382, 755
Cac8I GCNNGC 1 cut(s) 1355
CaiI CAGNNNCTG 1 cut(s) 506
CfoI GCGC 3 cut(s) 736, 2133, 2243
Cfr13I GGNCC 3 cut(s) 321, 393, 551
Cfr9I CCCGGG 2 cut(s) 1492, 2018
CseI GACGC 1 cut(s) 1811
Csp6I GTAC 6 cut(s) 413, 744, 1518, 1614, 1922, 2057
CspCI CAANNNNNGTGG 2 cut(s) 1048, 1083
CviAII CATG 9 cut(s) 91, 603, 820, 950, 1350, 1501, 1984, 2117, 2236
CviQI GTAC 6 cut(s) 413, 744, 1518, 1614, 1922, 2057
DdeI CTNAG 6 cut(s) 6, 537, 776, 824, 941, 1155
DpnI GATC 4 cut(s) 490, 892, 1251, 1272
DpnII GATC 4 cut(s) 488, 890, 1249, 1270
DraIII CACNNNGTG 1 cut(s) 1033
Eam1104I CTCTTC 3 cut(s) 5, 137, 1909
EarI CTCTTC 3 cut(s) 5, 137, 1909
EciI GGCGGA 1 cut(s) 1713
Eco130I CCWWGG 3 cut(s) 949, 1446, 1934
Eco31I GGTCTC 2 cut(s) 1502, 1946
Eco47I GGWCC 2 cut(s) 321, 551
Eco57I CTGAAG 5 cut(s) 516, 791, 947, 1131, 1602
Eco81I CCTNAGG 1 cut(s) 1155
Eco88I CYCGRG 2 cut(s) 1492, 2018
EcoNI CCTNNNNNAGG 1 cut(s) 1698
EcoRII CCWGG 4 cut(s) 229, 547, 1693, 1714
EcoT14I CCWWGG 3 cut(s) 949, 1446, 1934
ErhI CCWWGG 3 cut(s) 949, 1446, 1934
FaeI CATG 9 cut(s) 94, 606, 823, 953, 1353, 1504, 1987, 2120, 2239
FalI AAGNNNNNCTT 4 cut(s) 297, 329, 996, 1028
FaqI GGGAC 3 cut(s) 697, 967, 1961
FatI CATG 9 cut(s) 90, 602, 819, 949, 1349, 1500, 1983, 2116, 2235
FauI CCCGC 1 cut(s) 67
FauNDI CATATG 1 cut(s) 1308
Fnu4HI GCNGC 3 cut(s) 501, 1212, 2185
FokI GGATG 7 cut(s) 187, 452, 992, 1439, 1698, 1917, 2066
Fsp4HI GCNGC 3 cut(s) 501, 1212, 2185
FspBI CTAG 7 cut(s) 62, 390, 1319, 1571, 1842, 1872, 2165
GlaI GCGC 3 cut(s) 735, 2132, 2242
GluI GCNGC 3 cut(s) 501, 1212, 2185
GsaI CCCAGC 2 cut(s) 119, 2159
HaeII RGCGCY 1 cut(s) 737
HaeIII GGCC 2 cut(s) 394, 868
HapII CCGG 2 cut(s) 1493, 2019
HgaI GACGC 1 cut(s) 1811
HhaI GCGC 3 cut(s) 736, 2133, 2243
Hin1II CATG 9 cut(s) 94, 606, 823, 953, 1353, 1504, 1987, 2120, 2239
Hin6I GCGC 3 cut(s) 734, 2131, 2241
HinP1I GCGC 3 cut(s) 734, 2131, 2241
HincII GTYRAC 1 cut(s) 1041
HindII GTYRAC 1 cut(s) 1041
HinfI GANTC 7 cut(s) 248, 272, 1073, 1196, 1627, 1688, 2062
HpaII CCGG 2 cut(s) 1493, 2019
Hpy166II GTNNAC 5 cut(s) 413, 830, 926, 1041, 1136
Hpy188III TCNNGA 4 cut(s) 363, 965, 1478, 2122
Hpy8I GTNNAC 5 cut(s) 413, 830, 926, 1041, 1136
Hpy99I CGWCG 1 cut(s) 1479
HpyAV CCTTC 5 cut(s) 393, 606, 737, 1254, 1847
HpyCH4III ACNGT 5 cut(s) 669, 813, 834, 1290, 1613
HpyCH4IV ACGT 3 cut(s) 238, 445, 1990
HpyF10VI GCNNNNNNNGC 4 cut(s) 251, 578, 1220, 2156
HpyF3I CTNAG 6 cut(s) 6, 537, 776, 824, 941, 1155
HpySE526I ACGT 3 cut(s) 238, 445, 1990
Hsp92II CATG 9 cut(s) 94, 606, 823, 953, 1353, 1504, 1987, 2120, 2239
HspAI GCGC 3 cut(s) 734, 2131, 2241
Kzo9I GATC 4 cut(s) 488, 890, 1249, 1270
LmnI GCTCC 3 cut(s) 167, 849, 1236
Lsp1109I GCAGC 3 cut(s) 512, 1198, 2196
LweI GCATC 7 cut(s) 55, 61, 1417, 1532, 1765, 1998, 2227
MaeI CTAG 7 cut(s) 62, 390, 1319, 1571, 1842, 1872, 2165
MaeII ACGT 3 cut(s) 238, 445, 1990
MaeIII GTNAC 8 cut(s) 283, 532, 815, 944, 1179, 1577, 1689, 1786
MalI GATC 4 cut(s) 490, 892, 1251, 1272
MboI GATC 4 cut(s) 488, 890, 1249, 1270
MflI RGATCY 2 cut(s) 488, 1249
MhlI GDGCHC 3 cut(s) 164, 229, 543
MlyI GAGTC 2 cut(s) 281, 1697
MmeI TCCRAC 2 cut(s) 1099, 1214
MroXI GAANNNNTTC 2 cut(s) 309, 1302
MseI TTAA 8 cut(s) 66, 99, 300, 803, 987, 1002, 1770, 1797
MslI CAYNNNNRTG 3 cut(s) 1425, 1590, 2115
MspI CCGG 2 cut(s) 1493, 2019
MspR9I CCNGG 8 cut(s) 231, 549, 1493, 1494, 1695, 1716, 2019, 2020
Mva1269I GAATGC 2 cut(s) 372, 2152
MvaI CCWGG 4 cut(s) 231, 549, 1695, 1716
MvnI CGCG 1 cut(s) 2243
MwoI GCNNNNNNNGC 4 cut(s) 251, 578, 1220, 2156
NciI CCSGG 4 cut(s) 1493, 1494, 2019, 2020
NcoI CCATGG 1 cut(s) 949
NdeI CATATG 1 cut(s) 1308
NdeII GATC 4 cut(s) 488, 890, 1249, 1270
NlaIII CATG 9 cut(s) 94, 606, 823, 953, 1353, 1504, 1987, 2120, 2239
NlaIV GGNNCC 4 cut(s) 228, 322, 1232, 2171
NmuCI GTSAC 5 cut(s) 944, 1179, 1577, 1689, 1786
NspI RCATGY 2 cut(s) 606, 823
PaqCI CACCTGC 1 cut(s) 382
PciI ACATGT 1 cut(s) 602
PctI GAATGC 2 cut(s) 372, 2152
PdmI GAANNNNTTC 2 cut(s) 309, 1302
PfeI GAWTC 5 cut(s) 248, 1073, 1196, 1627, 2062
PfoI TCCNGGA 1 cut(s) 1714
PkrI GCNGC 3 cut(s) 502, 1213, 2186
PleI GAGTC 2 cut(s) 280, 1696
PpsI GAGTC 2 cut(s) 280, 1696
PscI ACATGT 1 cut(s) 602
Psp6I CCWGG 4 cut(s) 229, 547, 1693, 1714
PspFI CCCAGC 2 cut(s) 115, 2155
PspGI CCWGG 4 cut(s) 229, 547, 1693, 1714
PspN4I GGNNCC 4 cut(s) 228, 322, 1232, 2171
PspPI GGNCC 3 cut(s) 321, 393, 551
PstI CTGCAG 1 cut(s) 852
PstNI CAGNNNCTG 1 cut(s) 506
PsuI RGATCY 2 cut(s) 488, 1249
RsaI GTAC 6 cut(s) 414, 745, 1519, 1615, 1923, 2058
RsaNI GTAC 6 cut(s) 413, 744, 1518, 1614, 1922, 2057
RseI CAYNNNNRTG 3 cut(s) 1425, 1590, 2115
SaqAI TTAA 8 cut(s) 66, 99, 300, 803, 987, 1002, 1770, 1797
SatI GCNGC 3 cut(s) 501, 1212, 2185
Sau3AI GATC 4 cut(s) 488, 890, 1249, 1270
Sau96I GGNCC 3 cut(s) 321, 393, 551
ScaI AGTACT 1 cut(s) 1615
SchI GAGTC 2 cut(s) 281, 1697
ScrFI CCNGG 8 cut(s) 231, 549, 1493, 1494, 1695, 1716, 2019, 2020
SduI GDGCHC 3 cut(s) 164, 229, 543
SfaNI GCATC 7 cut(s) 55, 61, 1417, 1532, 1765, 1998, 2227
SfcI CTRYAG 3 cut(s) 848, 1278, 2252
SinI GGWCC 2 cut(s) 321, 551
SmaI CCCGGG 2 cut(s) 1494, 2020
SmiMI CAYNNNNRTG 3 cut(s) 1425, 1590, 2115
SsiI CCGC 6 cut(s) 29, 74, 198, 1698, 1845, 2066
SspI AATATT 2 cut(s) 1000, 1171
SspMI CTAG 7 cut(s) 62, 390, 1319, 1571, 1842, 1872, 2165
StyD4I CCNGG 8 cut(s) 229, 547, 1491, 1492, 1693, 1714, 2017, 2018
StyI CCWWGG 3 cut(s) 949, 1446, 1934
TaaI ACNGT 5 cut(s) 669, 813, 834, 1290, 1613
TaiI ACGT 3 cut(s) 241, 448, 1993
TaqI TCGA 2 cut(s) 217, 1477
TatI WGTACW 3 cut(s) 412, 1613, 2056
TfiI GAWTC 5 cut(s) 248, 1073, 1196, 1627, 2062
Tru1I TTAA 8 cut(s) 66, 99, 300, 803, 987, 1002, 1770, 1797
Tru9I TTAA 8 cut(s) 66, 99, 300, 803, 987, 1002, 1770, 1797
TscAI CASTG 5 cut(s) 674, 816, 949, 1132, 1295
TseFI GTSAC 5 cut(s) 944, 1179, 1577, 1689, 1786
TseI GCWGC 3 cut(s) 500, 1211, 2184
Tsp45I GTSAC 5 cut(s) 944, 1179, 1577, 1689, 1786
TspGWI ACGGA 3 cut(s) 313, 2033, 2201
TspMI CCCGGG 2 cut(s) 1492, 2018
TspRI CASTG 5 cut(s) 674, 816, 949, 1132, 1295
VpaK11BI GGWCC 2 cut(s) 321, 551
XagI CCTNNNNNAGG 1 cut(s) 1698
XapI RAATTY 7 cut(s) 51, 296, 788, 1217, 1298, 1546, 2230
XceI RCATGY 2 cut(s) 606, 823
XcmI CCANNNNNNNNNTGG 2 cut(s) 884, 1932
XmaI CCCGGG 2 cut(s) 1492, 2018
XmnI GAANNNNTTC 2 cut(s) 309, 1302
XspI CTAG 7 cut(s) 62, 390, 1319, 1571, 1842, 1872, 2165
ZrmI AGTACT 1 cut(s) 1615
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.