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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g23920 FvH4_2g23920 |
| malus_domestica | MD11G1308600.v1.1 |
| prunus_persica | Prupe.8G262800_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr6g0291551 |
| rosa_laevigata | RLG00000012108 |
| rosa_multiflora | Rmu_sc0002226.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00175980 |
| rosa_rugosa | Rorug06G0220200 |
| rosa_samantha | Rh6AG332400 Rh6BG339300 Rh6CG345600 Rh6DG332900 |
| rosa_wichuraiana | Rw6G028870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 988 |
| AatII | GACGTC | 1 cut(s) | 294 |
| Acc36I | ACCTGC | 2 cut(s) | 988, 1361 |
| AccB1I | GGYRCC | 1 cut(s) | 832 |
| AccII | CGCG | 3 cut(s) | 219, 345, 353 |
| AclWI | GGATC | 2 cut(s) | 377, 1504 |
| AcoI | YGGCCR | 1 cut(s) | 348 |
| AcsI | RAATTY | 8 cut(s) | 149, 415, 657, 902, 1394, 1823, 1904, 2152 |
| AcuI | CTGAAG | 6 cut(s) | 260, 1122, 1397, 1553, 1737, 2208 |
| AcyI | GRCGYC | 2 cut(s) | 222, 291 |
| AdeI | CACNNNGTG | 2 cut(s) | 315, 1639 |
| AfaI | GTAC | 7 cut(s) | 323, 514, 527, 1020, 1351, 2125, 2221 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 121, 357, 777, 1007, 1470, 2306 |
| AflIII | ACRYGT | 1 cut(s) | 1208 |
| AgsI | TTSAA | 7 cut(s) | 204, 475, 758, 1025, 1194, 1515, 2161 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 295 |
| AjnI | CCWGG | 5 cut(s) | 80, 835, 1153, 2299, 2320 |
| Alw21I | GWGCWC | 3 cut(s) | 770, 1149, 2000 |
| Alw26I | GTCTC | 6 cut(s) | 62, 967, 1755, 2108, 2276, 2552 |
| AlwI | GGATC | 2 cut(s) | 377, 1504 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1112 |
| Ama87I | CYCGRG | 1 cut(s) | 2098 |
| AoxI | GGCC | 4 cut(s) | 280, 348, 998, 1472 |
| ApeKI | GCWGC | 2 cut(s) | 1106, 1817 |
| ApoI | RAATTY | 8 cut(s) | 149, 415, 657, 902, 1394, 1823, 1904, 2152 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2177, 2209 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 915, 1908 |
| AspLEI | GCGC | 2 cut(s) | 127, 345 |
| AspS9I | GGNCC | 5 cut(s) | 47, 927, 999, 1157, 1330 |
| AsuC2I | CCSGG | 2 cut(s) | 2099, 2100 |
| AsuII | TTCGAA | 1 cut(s) | 67 |
| AvaI | CYCGRG | 1 cut(s) | 2098 |
| AvaII | GGWCC | 4 cut(s) | 47, 927, 1157, 1330 |
| AxyI | CCTNAGG | 1 cut(s) | 1761 |
| BaeGI | GKGCMC | 1 cut(s) | 835 |
| BanI | GGYRCC | 1 cut(s) | 832 |
| BanII | GRGCYC | 1 cut(s) | 2000 |
| BbsI | GAAGAC | 2 cut(s) | 1559, 1759 |
| Bbv12I | GWGCWC | 3 cut(s) | 770, 1149, 2000 |
| BbvCI | CCTCAGC | 1 cut(s) | 576 |
| BbvI | GCAGC | 2 cut(s) | 1118, 1829 |
| BccI | CCATC | 6 cut(s) | 1036, 1127, 1163, 1961, 2325, 2570 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 476, 510 |
| BciT130I | CCWGG | 5 cut(s) | 82, 837, 1155, 2301, 2322 |
| BciVI | GTATCC | 1 cut(s) | 2321 |
| BclI | TGATCA | 2 cut(s) | 481, 1621 |
| BcnI | CCSGG | 2 cut(s) | 2099, 2100 |
| BcoDI | GTCTC | 6 cut(s) | 62, 967, 1755, 2108, 2276, 2552 |
| BfaI | CTAG | 8 cut(s) | 338, 557, 668, 996, 1925, 2177, 2448, 2478 |
| BfmI | CTRYAG | 2 cut(s) | 1454, 1884 |
| BfoI | RGCGCY | 1 cut(s) | 128 |
| BfuAI | ACCTGC | 2 cut(s) | 988, 1361 |
| BfuI | GTATCC | 1 cut(s) | 2321 |
| BglII | AGATCT | 2 cut(s) | 1094, 1855 |
| BisI | GCNGC | 5 cut(s) | 123, 351, 354, 1107, 1818 |
| BlsI | GCNGC | 5 cut(s) | 124, 352, 355, 1108, 1819 |
| BmcAI | AGTACT | 3 cut(s) | 514, 1020, 2221 |
| Bme1390I | CCNGG | 7 cut(s) | 82, 837, 1155, 2099, 2100, 2301, 2322 |
| Bme18I | GGWCC | 4 cut(s) | 47, 927, 1157, 1330 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 295 |
| BmeT110I | CYCGRG | 1 cut(s) | 2098 |
| BmgT120I | GGNCC | 5 cut(s) | 47, 927, 999, 1157, 1330 |
| BmiI | GGNNCC | 3 cut(s) | 834, 928, 1838 |
| BmrFI | CCNGG | 7 cut(s) | 82, 837, 1155, 2099, 2100, 2301, 2322 |
| BmsI | GCATC | 6 cut(s) | 311, 484, 661, 667, 2023, 2371 |
| BpiI | GAAGAC | 2 cut(s) | 1559, 1759 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 2235, 2267, 2298, 2330 |
| Bpu10I | CCTNAGC | 1 cut(s) | 576 |
| Bpu14I | TTCGAA | 1 cut(s) | 67 |
| BpuMI | CCSGG | 2 cut(s) | 2099, 2100 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1854 |
| BsaHI | GRCGYC | 2 cut(s) | 222, 291 |
| BsaI | GGTCTC | 3 cut(s) | 62, 2108, 2552 |
| BsaJI | CCNNGG | 8 cut(s) | 277, 351, 390, 836, 1555, 2052, 2098, 2540 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 121, 357, 777, 1007, 1470, 2306 |
| Bse1I | ACTGG | 2 cut(s) | 208, 295 |
| Bse21I | CCTNAGG | 1 cut(s) | 1761 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1854 |
| BseBI | CCWGG | 5 cut(s) | 82, 837, 1155, 2301, 2322 |
| BseDI | CCNNGG | 8 cut(s) | 277, 351, 390, 836, 1555, 2052, 2098, 2540 |
| BseGI | GGATG | 7 cut(s) | 20, 302, 786, 1051, 1591, 2038, 2317 |
| BseJI | GATNNNNATC | 1 cut(s) | 1854 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 121, 357, 777, 1007, 1470, 2306 |
| BseMII | CTCAG | 6 cut(s) | 567, 1134, 1396, 1444, 1561, 1775 |
| BseNI | ACTGG | 2 cut(s) | 208, 295 |
| BseRI | GAGGAG | 6 cut(s) | 448, 1250, 1332, 1535, 1703, 2496 |
| BseSI | GKGCMC | 1 cut(s) | 835 |
| BseXI | GCAGC | 2 cut(s) | 1118, 1829 |
| BseYI | CCCAGC | 2 cut(s) | 356, 721 |
| Bsh1236I | CGCG | 3 cut(s) | 219, 345, 353 |
| BshFI | GGCC | 4 cut(s) | 282, 350, 1000, 1474 |
| BshNI | GGYRCC | 1 cut(s) | 832 |
| BsiHKAI | GWGCWC | 3 cut(s) | 770, 1149, 2000 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2098 |
| BsiSI | CCGG | 2 cut(s) | 1806, 2099 |
| BslFI | GGGAC | 3 cut(s) | 122, 1573, 2567 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 121, 357, 777, 1007, 1470, 2306 |
| BsmAI | GTCTC | 6 cut(s) | 62, 967, 1755, 2108, 2276, 2552 |
| BsmFI | GGGAC | 3 cut(s) | 122, 1573, 2567 |
| BsmI | GAATGC | 1 cut(s) | 978 |
| BsnI | GGCC | 4 cut(s) | 282, 350, 1000, 1474 |
| Bso31I | GGTCTC | 3 cut(s) | 62, 2108, 2552 |
| BsoBI | CYCGRG | 1 cut(s) | 2098 |
| Bsp119I | TTCGAA | 1 cut(s) | 67 |
| Bsp1286I | GDGCHC | 4 cut(s) | 770, 835, 1149, 2000 |
| Bsp143I | GATC | 7 cut(s) | 369, 481, 1094, 1496, 1621, 1855, 1876 |
| Bsp19I | CCATGG | 1 cut(s) | 1555 |
| BspANI | GGCC | 4 cut(s) | 282, 350, 1000, 1474 |
| BspCNI | CTCAG | 6 cut(s) | 568, 1135, 1395, 1443, 1560, 1774 |
| BspFNI | CGCG | 3 cut(s) | 219, 345, 353 |
| BspLI | GGNNCC | 3 cut(s) | 834, 928, 1838 |
| BspMAI | CTGCAG | 1 cut(s) | 1458 |
| BspMI | ACCTGC | 2 cut(s) | 988, 1361 |
| BspPI | GGATC | 2 cut(s) | 377, 1504 |
| BspT104I | TTCGAA | 1 cut(s) | 67 |
| BspT107I | GGYRCC | 1 cut(s) | 832 |
| BspTNI | GGTCTC | 3 cut(s) | 62, 2108, 2552 |
| BsrI | ACTGG | 2 cut(s) | 208, 295 |
| BssECI | CCNNGG | 8 cut(s) | 277, 351, 390, 836, 1555, 2052, 2098, 2540 |
| BssMI | GATC | 7 cut(s) | 369, 481, 1094, 1496, 1621, 1855, 1876 |
| BssNI | GRCGYC | 2 cut(s) | 222, 291 |
| BssT1I | CCWWGG | 4 cut(s) | 390, 1555, 2052, 2540 |
| Bst2UI | CCWGG | 5 cut(s) | 82, 837, 1155, 2301, 2322 |
| Bst4CI | ACNGT | 6 cut(s) | 178, 1275, 1419, 1440, 1896, 2219 |
| Bst6I | CTCTTC | 6 cut(s) | 69, 82, 594, 611, 743, 2515 |
| BstACI | GRCGYC | 2 cut(s) | 222, 291 |
| BstBI | TTCGAA | 1 cut(s) | 67 |
| BstC8I | GCNNGC | 2 cut(s) | 1961, 2528 |
| BstDEI | CTNAG | 8 cut(s) | 576, 591, 612, 1143, 1382, 1430, 1547, 1761 |
| BstDSI | CCRYGG | 2 cut(s) | 351, 1555 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2304 |
| BstF5I | GGATG | 7 cut(s) | 20, 302, 786, 1051, 1591, 2038, 2317 |
| BstFNI | CGCG | 3 cut(s) | 219, 345, 353 |
| BstH2I | RGCGCY | 1 cut(s) | 128 |
| BstHHI | GCGC | 2 cut(s) | 127, 345 |
| BstKTI | GATC | 7 cut(s) | 372, 484, 1097, 1499, 1624, 1858, 1879 |
| BstMAI | GTCTC | 6 cut(s) | 62, 967, 1755, 2108, 2276, 2552 |
| BstMBI | GATC | 7 cut(s) | 369, 481, 1094, 1496, 1621, 1855, 1876 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 857, 1184, 1826 |
| BstNI | CCWGG | 5 cut(s) | 82, 837, 1155, 2301, 2322 |
| BstNSI | RCATGY | 2 cut(s) | 1212, 1429 |
| BstSCI | CCNGG | 7 cut(s) | 80, 835, 1153, 2097, 2098, 2299, 2320 |
| BstSFI | CTRYAG | 2 cut(s) | 1454, 1884 |
| BstSLI | GKGCMC | 1 cut(s) | 835 |
| BstUI | CGCG | 3 cut(s) | 219, 345, 353 |
| BstV1I | GCAGC | 2 cut(s) | 1118, 1829 |
| BstV2I | GAAGAC | 2 cut(s) | 1559, 1759 |
| BstX2I | RGATCY | 2 cut(s) | 1094, 1855 |
| BstYI | RGATCY | 2 cut(s) | 1094, 1855 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1761 |
| BsuI | GTATCC | 1 cut(s) | 2321 |
| BsuRI | GGCC | 4 cut(s) | 282, 350, 1000, 1474 |
| BtgI | CCRYGG | 2 cut(s) | 351, 1555 |
| BtsCI | GGATG | 7 cut(s) | 20, 302, 786, 1051, 1591, 2038, 2317 |
| BtsI | GCAGTG | 1 cut(s) | 1738 |
| BtsIMutI | CAGTG | 4 cut(s) | 1415, 1555, 1738, 1901 |
| BveI | ACCTGC | 2 cut(s) | 988, 1361 |
| Cac8I | GCNNGC | 2 cut(s) | 1961, 2528 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1112 |
| CfoI | GCGC | 2 cut(s) | 127, 345 |
| Cfr13I | GGNCC | 5 cut(s) | 47, 927, 999, 1157, 1330 |
| Cfr42I | CCGCGG | 1 cut(s) | 354 |
| Cfr9I | CCCGGG | 1 cut(s) | 2098 |
| CseI | GACGC | 2 cut(s) | 230, 2417 |
| Csp6I | GTAC | 7 cut(s) | 322, 513, 526, 1019, 1350, 2124, 2220 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 487, 522, 1654, 1689 |
| CviAII | CATG | 8 cut(s) | 313, 1209, 1426, 1556, 1956, 2107, 2590, 2595 |
| CviQI | GTAC | 7 cut(s) | 322, 513, 526, 1019, 1350, 2124, 2220 |
| DdeI | CTNAG | 8 cut(s) | 576, 591, 612, 1143, 1382, 1430, 1547, 1761 |
| DpnI | GATC | 7 cut(s) | 371, 483, 1096, 1498, 1623, 1857, 1878 |
| DpnII | GATC | 7 cut(s) | 369, 481, 1094, 1496, 1621, 1855, 1876 |
| DraI | TTTAAA | 1 cut(s) | 15 |
| DraIII | CACNNNGTG | 2 cut(s) | 315, 1639 |
| DriI | GACNNNNNGTC | 1 cut(s) | 295 |
| EaeI | YGGCCR | 1 cut(s) | 348 |
| Eam1104I | CTCTTC | 6 cut(s) | 69, 82, 594, 611, 743, 2515 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 295 |
| EarI | CTCTTC | 6 cut(s) | 69, 82, 594, 611, 743, 2515 |
| EciI | GGCGGA | 2 cut(s) | 87, 2319 |
| Ecl136II | GAGCTC | 1 cut(s) | 1998 |
| Eco130I | CCWWGG | 4 cut(s) | 390, 1555, 2052, 2540 |
| Eco24I | GRGCYC | 1 cut(s) | 2000 |
| Eco31I | GGTCTC | 3 cut(s) | 62, 2108, 2552 |
| Eco47I | GGWCC | 4 cut(s) | 47, 927, 1157, 1330 |
| Eco53kI | GAGCTC | 1 cut(s) | 1998 |
| Eco57I | CTGAAG | 6 cut(s) | 260, 1122, 1397, 1553, 1737, 2208 |
| Eco81I | CCTNAGG | 1 cut(s) | 1761 |
| Eco88I | CYCGRG | 1 cut(s) | 2098 |
| EcoICRI | GAGCTC | 1 cut(s) | 1998 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2304 |
| EcoRII | CCWGG | 5 cut(s) | 80, 835, 1153, 2299, 2320 |
| EcoT14I | CCWWGG | 4 cut(s) | 390, 1555, 2052, 2540 |
| EcoT38I | GRGCYC | 1 cut(s) | 2000 |
| ErhI | CCWWGG | 4 cut(s) | 390, 1555, 2052, 2540 |
| FaeI | CATG | 8 cut(s) | 316, 1212, 1429, 1559, 1959, 2110, 2593, 2598 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 903, 935, 1602, 1634 |
| FaqI | GGGAC | 3 cut(s) | 122, 1573, 2567 |
| FatI | CATG | 8 cut(s) | 312, 1208, 1425, 1555, 1955, 2106, 2589, 2594 |
| FauI | CCCGC | 2 cut(s) | 148, 673 |
| FauNDI | CATATG | 1 cut(s) | 1914 |
| FbaI | TGATCA | 2 cut(s) | 481, 1621 |
| Fnu4HI | GCNGC | 5 cut(s) | 123, 351, 354, 1107, 1818 |
| FokI | GGATG | 7 cut(s) | 7, 289, 793, 1058, 1598, 2045, 2304 |
| FriOI | GRGCYC | 1 cut(s) | 2000 |
| Fsp4HI | GCNGC | 5 cut(s) | 123, 351, 354, 1107, 1818 |
| FspBI | CTAG | 8 cut(s) | 338, 557, 668, 996, 1925, 2177, 2448, 2478 |
| GlaI | GCGC | 2 cut(s) | 126, 344 |
| GluI | GCNGC | 5 cut(s) | 123, 351, 354, 1107, 1818 |
| GsaI | CCCAGC | 2 cut(s) | 360, 725 |
| HaeII | RGCGCY | 1 cut(s) | 128 |
| HaeIII | GGCC | 4 cut(s) | 282, 350, 1000, 1474 |
| HapII | CCGG | 2 cut(s) | 1806, 2099 |
| HgaI | GACGC | 2 cut(s) | 230, 2417 |
| HhaI | GCGC | 2 cut(s) | 127, 345 |
| Hin1I | GRCGYC | 2 cut(s) | 222, 291 |
| Hin1II | CATG | 8 cut(s) | 316, 1212, 1429, 1559, 1959, 2110, 2593, 2598 |
| Hin6I | GCGC | 2 cut(s) | 125, 343 |
| HinP1I | GCGC | 2 cut(s) | 125, 343 |
| HincII | GTYRAC | 2 cut(s) | 383, 1647 |
| HindII | GTYRAC | 2 cut(s) | 383, 1647 |
| HinfI | GANTC | 7 cut(s) | 5, 379, 854, 878, 1802, 2233, 2294 |
| HpaII | CCGG | 2 cut(s) | 1806, 2099 |
| Hpy166II | GTNNAC | 6 cut(s) | 383, 526, 1436, 1532, 1647, 1742 |
| Hpy188III | TCNNGA | 5 cut(s) | 485, 969, 1571, 1925, 2084 |
| Hpy8I | GTNNAC | 6 cut(s) | 383, 526, 1436, 1532, 1647, 1742 |
| Hpy99I | CGWCG | 4 cut(s) | 224, 251, 293, 2085 |
| HpyAV | CCTTC | 8 cut(s) | 38, 210, 999, 1212, 1343, 1860, 2442, 2453 |
| HpyCH4III | ACNGT | 6 cut(s) | 178, 1275, 1419, 1440, 1896, 2219 |
| HpyCH4IV | ACGT | 3 cut(s) | 291, 844, 1051 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 857, 1184, 1826 |
| HpyF3I | CTNAG | 8 cut(s) | 576, 591, 612, 1143, 1382, 1430, 1547, 1761 |
| HpySE526I | ACGT | 3 cut(s) | 291, 844, 1051 |
| Hsp92I | GRCGYC | 2 cut(s) | 222, 291 |
| Hsp92II | CATG | 8 cut(s) | 316, 1212, 1429, 1559, 1959, 2110, 2593, 2598 |
| HspAI | GCGC | 2 cut(s) | 125, 343 |
| Ksp22I | TGATCA | 2 cut(s) | 481, 1621 |
| KspI | CCGCGG | 1 cut(s) | 354 |
| Kzo9I | GATC | 7 cut(s) | 369, 481, 1094, 1496, 1621, 1855, 1876 |
| LmnI | GCTCC | 6 cut(s) | 394, 773, 1345, 1455, 1676, 1842 |
| Lsp1109I | GCAGC | 2 cut(s) | 1118, 1829 |
| LweI | GCATC | 6 cut(s) | 311, 484, 661, 667, 2023, 2371 |
| MaeI | CTAG | 8 cut(s) | 338, 557, 668, 996, 1925, 2177, 2448, 2478 |
| MaeII | ACGT | 3 cut(s) | 291, 844, 1051 |
| MaeIII | GTNAC | 9 cut(s) | 580, 889, 1138, 1421, 1550, 1785, 2183, 2295, 2392 |
| MalI | GATC | 7 cut(s) | 371, 483, 1096, 1498, 1623, 1857, 1878 |
| MboI | GATC | 7 cut(s) | 369, 481, 1094, 1496, 1621, 1855, 1876 |
| MflI | RGATCY | 2 cut(s) | 1094, 1855 |
| MhlI | GDGCHC | 4 cut(s) | 770, 835, 1149, 2000 |
| MlyI | GAGTC | 3 cut(s) | 388, 887, 2303 |
| MmeI | TCCRAC | 4 cut(s) | 130, 330, 1705, 1820 |
| MroXI | GAANNNNTTC | 2 cut(s) | 915, 1908 |
| MslI | CAYNNNNRTG | 3 cut(s) | 489, 2031, 2196 |
| MspA1I | CMGCKG | 1 cut(s) | 353 |
| MspI | CCGG | 2 cut(s) | 1806, 2099 |
| MspR9I | CCNGG | 7 cut(s) | 82, 837, 1155, 2099, 2100, 2301, 2322 |
| Mva1269I | GAATGC | 1 cut(s) | 978 |
| MvaI | CCWGG | 5 cut(s) | 82, 837, 1155, 2301, 2322 |
| MvnI | CGCG | 3 cut(s) | 219, 345, 353 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 857, 1184, 1826 |
| NciI | CCSGG | 2 cut(s) | 2099, 2100 |
| NcoI | CCATGG | 1 cut(s) | 1555 |
| NdeI | CATATG | 1 cut(s) | 1914 |
| NdeII | GATC | 7 cut(s) | 369, 481, 1094, 1496, 1621, 1855, 1876 |
| NlaIII | CATG | 8 cut(s) | 316, 1212, 1429, 1559, 1959, 2110, 2593, 2598 |
| NlaIV | GGNNCC | 3 cut(s) | 834, 928, 1838 |
| NmeAIII | GCCGAG | 2 cut(s) | 250, 258 |
| NmuCI | GTSAC | 6 cut(s) | 580, 1550, 1785, 2183, 2295, 2392 |
| NspI | RCATGY | 2 cut(s) | 1212, 1429 |
| NspV | TTCGAA | 1 cut(s) | 67 |
| PaqCI | CACCTGC | 1 cut(s) | 988 |
| PciI | ACATGT | 1 cut(s) | 1208 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 285 |
| PctI | GAATGC | 1 cut(s) | 978 |
| PdmI | GAANNNNTTC | 2 cut(s) | 915, 1908 |
| PfeI | GAWTC | 3 cut(s) | 854, 1802, 2233 |
| PfoI | TCCNGGA | 1 cut(s) | 2320 |
| PkrI | GCNGC | 5 cut(s) | 124, 352, 355, 1108, 1819 |
| PleI | GAGTC | 3 cut(s) | 387, 886, 2302 |
| PpsI | GAGTC | 3 cut(s) | 387, 886, 2302 |
| PscI | ACATGT | 1 cut(s) | 1208 |
| Psp124BI | GAGCTC | 1 cut(s) | 2000 |
| Psp6I | CCWGG | 5 cut(s) | 80, 835, 1153, 2299, 2320 |
| PspFI | CCCAGC | 2 cut(s) | 356, 721 |
| PspGI | CCWGG | 5 cut(s) | 80, 835, 1153, 2299, 2320 |
| PspN4I | GGNNCC | 3 cut(s) | 834, 928, 1838 |
| PspPI | GGNCC | 5 cut(s) | 47, 927, 999, 1157, 1330 |
| PstI | CTGCAG | 1 cut(s) | 1458 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1112 |
| PsuI | RGATCY | 2 cut(s) | 1094, 1855 |
| RsaI | GTAC | 7 cut(s) | 323, 514, 527, 1020, 1351, 2125, 2221 |
| RsaNI | GTAC | 7 cut(s) | 322, 513, 526, 1019, 1350, 2124, 2220 |
| RseI | CAYNNNNRTG | 3 cut(s) | 489, 2031, 2196 |
| SacI | GAGCTC | 1 cut(s) | 2000 |
| SacII | CCGCGG | 1 cut(s) | 354 |
| SatI | GCNGC | 5 cut(s) | 123, 351, 354, 1107, 1818 |
| Sau3AI | GATC | 7 cut(s) | 369, 481, 1094, 1496, 1621, 1855, 1876 |
| Sau96I | GGNCC | 5 cut(s) | 47, 927, 999, 1157, 1330 |
| ScaI | AGTACT | 3 cut(s) | 514, 1020, 2221 |
| SchI | GAGTC | 3 cut(s) | 388, 887, 2303 |
| ScrFI | CCNGG | 7 cut(s) | 82, 837, 1155, 2099, 2100, 2301, 2322 |
| SduI | GDGCHC | 4 cut(s) | 770, 835, 1149, 2000 |
| SfaNI | GCATC | 6 cut(s) | 311, 484, 661, 667, 2023, 2371 |
| SfcI | CTRYAG | 2 cut(s) | 1454, 1884 |
| Sfr303I | CCGCGG | 1 cut(s) | 354 |
| SfuI | TTCGAA | 1 cut(s) | 67 |
| SgrBI | CCGCGG | 1 cut(s) | 354 |
| SinI | GGWCC | 4 cut(s) | 47, 927, 1157, 1330 |
| SmaI | CCCGGG | 1 cut(s) | 2100 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 489, 2031, 2196 |
| SspI | AATATT | 2 cut(s) | 1606, 1777 |
| SspMI | CTAG | 8 cut(s) | 338, 557, 668, 996, 1925, 2177, 2448, 2478 |
| SstI | GAGCTC | 1 cut(s) | 2000 |
| StyD4I | CCNGG | 7 cut(s) | 80, 835, 1153, 2097, 2098, 2299, 2320 |
| StyI | CCWWGG | 4 cut(s) | 390, 1555, 2052, 2540 |
| TaaI | ACNGT | 6 cut(s) | 178, 1275, 1419, 1440, 1896, 2219 |
| TaiI | ACGT | 3 cut(s) | 294, 847, 1054 |
| TaqI | TCGA | 5 cut(s) | 8, 67, 441, 823, 2083 |
| TatI | WGTACW | 4 cut(s) | 512, 525, 1018, 2219 |
| TauI | GCSGC | 3 cut(s) | 125, 353, 356 |
| TfiI | GAWTC | 3 cut(s) | 854, 1802, 2233 |
| TscAI | CASTG | 4 cut(s) | 1422, 1555, 1738, 1901 |
| TseFI | GTSAC | 6 cut(s) | 580, 1550, 1785, 2183, 2295, 2392 |
| TseI | GCWGC | 2 cut(s) | 1106, 1817 |
| Tsp45I | GTSAC | 6 cut(s) | 580, 1550, 1785, 2183, 2295, 2392 |
| TspDTI | ATGAA | 8 cut(s) | 924, 1062, 1179, 1901, 2384, 2508, 2532, 2578 |
| TspGWI | ACGGA | 2 cut(s) | 124, 919 |
| TspMI | CCCGGG | 1 cut(s) | 2098 |
| TspRI | CASTG | 4 cut(s) | 1422, 1555, 1738, 1901 |
| VpaK11BI | GGWCC | 4 cut(s) | 47, 927, 1157, 1330 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2304 |
| XapI | RAATTY | 8 cut(s) | 149, 415, 657, 902, 1394, 1823, 1904, 2152 |
| XbaI | TCTAGA | 1 cut(s) | 1924 |
| XceI | RCATGY | 2 cut(s) | 1212, 1429 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1490, 2538 |
| XmaI | CCCGGG | 1 cut(s) | 2098 |
| XmnI | GAANNNNTTC | 2 cut(s) | 915, 1908 |
| XspI | CTAG | 8 cut(s) | 338, 557, 668, 996, 1925, 2177, 2448, 2478 |
| ZraI | GACGTC | 1 cut(s) | 292 |
| ZrmI | AGTACT | 3 cut(s) | 514, 1020, 2221 |