Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0009065

Physical Location & Seq

Genomic Coordinates Reverse (-)

3503113 .. 3508739

Gene Structure 5627 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ16247

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1494 bp

ATGTCCACCGAGGCAGAGCCGTCGTCGTCGACGTCGACGTCGGGGTTCATGACCGACGGCCCTGATGACGTGGAAGACTACATTTCGGCTAATGAAGGAGAACCGGCATTGCCCTGGGACATATTTAGTCATGTTTTTGATCTTGTGCAGAAGGGAAACCAGGCTTTTCGAGAGAACCGATTTGAGGAGGCAATTAGTTGCTATTCAAGAGCCAATTACATTAAACCATGTGACCCTGTTATTCTTGGCAACCGAACTGCTGCTTATATCAGGATCAGTAAATTCCTTAAACGCATACCGGCGTCGGCTTCTGAATATAGAGCACGGACTGGATTGGATCCTACAATACATGCTGAACTTGCTTTAAAGGATGTGGAGAAGCTAATCAACCTCCGAAGTAATTCAGCAAAACCATACATGTTGAAAGCTGAAGCTCTAAGTTTGCTGGAGAAATATGAAATGGCCCGGGATATTATCTTATGTGGTCTTCATGTTGACCCTTTAAGCAATCCTCTTCGGACAGCTCTTCAGAATTTGGAGAGTATACAAGTTAGCATGACAGGGAAGATAAGCCATAGTAAACCAGAACGAAAAGCAGAACGCAGCGATGATTTTGATTGCACGTTATGTTTCAAGTTACTCTATGAACCTGTGACAACGCCTTGTGGACATTCCTTTTGTCGATCATGCTTATTTCAGTCAATGGATCAAGGTAACAAATGTCCATTATGCCGAACCGTTCTGTTCATTAGTCCTAGAACATGTGCAATCAGTGTGACACTTAACGACATTATACAAAAGAACTTCCCAGAGGAATTTGCTGAAAGGAAGTCAGAGAATGACACAATGACAAACTTTGGTGCTGATTTGATGCCACTCTTTGTAATGGATGTTGTCCTTCCTTTTCAGAAGTTTCCACTACACATTTTTGAGCCTCGATATAGACTTATGGTGAGGAGGATAATGGAAGGCAACCGTCGGATGGGAATGGTCATCATCGATTCTACAACAGGTTCCATAGCTGATTTTGCTTGTGAGGTGGAAATTACTGAGTGCGAACCGCTTCCAGATGGGCGTTTCTATTTAGAGATTGAAAGTCGCCGAAGGTTTCGCATAATTCGATCTTGGGACCAAGATGGGTACCGAGTTGCAGAGATTGAATGGGTACAGGATATATGCCCACCAGAAGGATCTAGTGAGAGAACAGAATTGCAGGAATTGACGAATAATGCAGCAGAATATGCTCGCTTATGGATAGGGCGCGGTAAAAGAGCAGCAAGTCGAGATCGAAGACGACTTGAGAAACTTCTCAGTGTAGAAGCAATGATGCCATCAGTTCAAGATCCTGAGCGCTTCAGCTTCTGGCTGGCTTCCCTTTCAAACCGACGTCCTCACGAAAGATTGGATCTCTTATGCATGAGAGATACAAAAGAGAGAATACAACGGGGACTAATATATCTCAGAGCAGAAGAGCAAGGTTGTCAAGTGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009705 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010959 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019725 GO:0021700 GO:0022622 GO:0030154 GO:0031090 GO:0032501 GO:0032502 GO:0032879 GO:0036211 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0051049 GO:0051924 GO:0055082 GO:0065007 GO:0065008 GO:0071695 GO:0071704 GO:0080147 GO:0090558 GO:0090627 GO:0097272 GO:0097275 GO:0098588 GO:0098805 GO:0099402 GO:0140096 GO:1901564 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LON_substr_bdg Malectin_like Pkinase_Tyr zf-C3HC4_2

Protein Analysis

497

Amino Acids

57.01

Weight (kDa)

5.75

Isoelectric Point (pI)

51.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-C3HC4_3	PF13920	205 - 246	4.2e-08	Zinc finger, C3HC4 type (RING finger)
zf-RING_2	PF13639	206 - 245	3.7e-08	Ring finger domain
zf-C3HC4_2	PF13923	207 - 244	4.7e-13	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	207 - 244	1e-09	Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX	PF13445	207 - 242	2.4e-08	RING-type zinc-finger
zf-RING_5	PF14634	207 - 246	1.4e-06	zinc-RING finger domain
zf-C3HC4_4	PF15227	207 - 244	1.9e-06	zinc finger of C3HC4-type, RING
LON_substr_bdg	PF02190	291 - 487	8e-28	ATP-dependent protease La (LON) substrate-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009065)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18660 AT1G18660 AT1G18660 AT1G18660
fragaria_vesca	FvH4_5g14510 FvH4_5g14510 FvH4_5g14510
malus_domestica	MD06G1197800.v1.1 MD14G1205300.v1.1
prunus_persica	Prupe.5G198700_v2.0.a1 Prupe.5G198700_v2.0.a1
pyrus_communis	pycom06g17480 pycom14g16990
rosa_chinensis	RchiOBHm_Chr7g0182141
rosa_laevigata	RLG00000005147
rosa_multiflora	Rmu_co8332863.1_g000001
rosa_roxburghii	Rroxscaffold_3G00271470
rosa_samantha	Rh7AG048700 Rh7BG048600 Rh7CG050000 Rh7DG047900
rosa_wichuraiana	Rw0G021030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	37
AatII	GACGTC	3 cut(s)	35, 41, 1390
Acc65I	GGTACC	1 cut(s)	1140
AccB1I	GGYRCC	1 cut(s)	1140
AccI	GTMKAC	3 cut(s)	29, 35, 544
AccII	CGCG	1 cut(s)	1263
AciI	CCGC	2 cut(s)	1061, 1263
AclWI	GGATC	7 cut(s)	281, 332, 345, 714, 1198, 1337, 1413
AcsI	RAATTY	3 cut(s)	281, 532, 815
AcuI	CTGAAG	3 cut(s)	450, 512, 1339
AcyI	GRCGYC	4 cut(s)	32, 38, 302, 1387
AfaI	GTAC	2 cut(s)	1142, 1167
AfeI	AGCGCT	1 cut(s)	1352
AfiI	CCNNNNNNNGG	3 cut(s)	184, 982, 1187
AflIII	ACRYGT	2 cut(s)	417, 761
AgsI	TTSAA	7 cut(s)	207, 424, 634, 1094, 1160, 1340, 1380
AjiI	CACGTC	1 cut(s)	70
AjnI	CCWGG	2 cut(s)	113, 159
AluBI	AGCT	6 cut(s)	382, 428, 434, 524, 1022, 1359
AluI	AGCT	6 cut(s)	382, 428, 434, 524, 1022, 1359
Alw21I	GWGCWC	1 cut(s)	325
AlwI	GGATC	7 cut(s)	281, 332, 345, 714, 1198, 1337, 1413
AlwNI	CAGNNNCTG	1 cut(s)	1362
Ama87I	CYCGRG	1 cut(s)	465
Aor51HI	AGCGCT	1 cut(s)	1352
AoxI	GGCC	2 cut(s)	58, 462
ApeKI	GCWGC	4 cut(s)	260, 603, 1232, 1274
ApoI	RAATTY	3 cut(s)	281, 532, 815
ArsI	GACNNNNNNTTYG	2 cut(s)	660, 692
Asp700I	GAANNNNTTC	2 cut(s)	400, 1062
Asp718I	GGTACC	1 cut(s)	1140
AspLEI	GCGC	2 cut(s)	1263, 1353
AspS9I	GGNCC	3 cut(s)	59, 463, 1129
AsuC2I	CCSGG	2 cut(s)	466, 467
AsuHPI	GGTGA	1 cut(s)	964
AvaI	CYCGRG	1 cut(s)	465
AvaII	GGWCC	1 cut(s)	1129
BamHI	GGATCC	1 cut(s)	337
BanI	GGYRCC	1 cut(s)	1140
BbsI	GAAGAC	3 cut(s)	81, 479, 1297
Bbv12I	GWGCWC	1 cut(s)	325
BbvI	GCAGC	4 cut(s)	247, 615, 1244, 1286
BccI	CCATC	4 cut(s)	976, 1064, 1130, 1339
BceAI	ACGGC	2 cut(s)	4, 73
BcgI	CGANNNNNNTGC	1 cut(s)	37
BciT130I	CCWGG	2 cut(s)	115, 161
BcnI	CCSGG	2 cut(s)	466, 467
BfaI	CTAG	2 cut(s)	756, 1194
BfoI	RGCGCY	1 cut(s)	1354
BisI	GCNGC	4 cut(s)	261, 604, 1233, 1275
BlsI	GCNGC	4 cut(s)	262, 605, 1234, 1276
Bme1390I	CCNGG	4 cut(s)	115, 161, 466, 467
Bme18I	GGWCC	1 cut(s)	1129
BmeT110I	CYCGRG	1 cut(s)	465
BmgBI	CACGTC	1 cut(s)	70
BmgT120I	GGNCC	3 cut(s)	59, 463, 1129
BmiI	GGNNCC	4 cut(s)	339, 1015, 1130, 1142
BmrFI	CCNGG	4 cut(s)	115, 161, 466, 467
BmsI	GCATC	2 cut(s)	861, 1317
BpiI	GAAGAC	3 cut(s)	81, 479, 1297
BpmI	CTGGAG	1 cut(s)	467
Bpu10I	CCTNAGC	1 cut(s)	1347
BpuEI	CTTGAG	1 cut(s)	1319
BpuMI	CCSGG	2 cut(s)	466, 467
Bsa29I	ATCGAT	1 cut(s)	999
BsaHI	GRCGYC	4 cut(s)	32, 38, 302, 1387
BsaJI	CCNNGG	4 cut(s)	9, 113, 114, 465
Bsc4I	CCNNNNNNNGG	3 cut(s)	184, 982, 1187
Bse118I	RCCGGY	2 cut(s)	103, 298
Bse1I	ACTGG	1 cut(s)	334
Bse3DI	GCAATG	2 cut(s)	107, 1329
BseBI	CCWGG	2 cut(s)	115, 161
BseCI	ATCGAT	1 cut(s)	999
BseDI	CCNNGG	4 cut(s)	9, 113, 114, 465
BseGI	GGATG	3 cut(s)	376, 895, 987
BseLI	CCNNNNNNNGG	3 cut(s)	184, 982, 1187
BseMI	GCAATG	2 cut(s)	107, 1329
BseMII	CTCAG	4 cut(s)	1041, 1324, 1338, 1474
BseNI	ACTGG	1 cut(s)	334
BseRI	GAGGAG	2 cut(s)	200, 970
BseXI	GCAGC	4 cut(s)	247, 615, 1244, 1286
BsgI	GTGCAG	1 cut(s)	167
Bsh1236I	CGCG	1 cut(s)	1263
BshFI	GGCC	2 cut(s)	60, 464
BshNI	GGYRCC	1 cut(s)	1140
BshVI	ATCGAT	1 cut(s)	999
BsiHKAI	GWGCWC	1 cut(s)	325
BsiHKCI	CYCGRG	1 cut(s)	465
BsiSI	CCGG	3 cut(s)	104, 299, 466
BslFI	GGGAC	3 cut(s)	131, 1142, 1461
BslI	CCNNNNNNNGG	3 cut(s)	184, 982, 1187
BsmFI	GGGAC	3 cut(s)	131, 1142, 1461
BsnI	GGCC	2 cut(s)	60, 464
BsoBI	CYCGRG	1 cut(s)	465
Bsp1286I	GDGCHC	1 cut(s)	325
BspACI	CCGC	2 cut(s)	1061, 1263
BspANI	GGCC	2 cut(s)	60, 464
BspCNI	CTCAG	4 cut(s)	1042, 1323, 1339, 1473
BspDI	ATCGAT	1 cut(s)	999
BspFNI	CGCG	1 cut(s)	1263
BspHI	TCATGA	1 cut(s)	48
BspLI	GGNNCC	4 cut(s)	339, 1015, 1130, 1142
BspPI	GGATC	7 cut(s)	281, 332, 345, 714, 1198, 1337, 1413
BspQI	GCTCTTC	2 cut(s)	531, 1464
BspT107I	GGYRCC	1 cut(s)	1140
BsrDI	GCAATG	2 cut(s)	107, 1329
BsrFI	RCCGGY	2 cut(s)	103, 298
BsrI	ACTGG	1 cut(s)	334
BssAI	RCCGGY	2 cut(s)	103, 298
BssECI	CCNNGG	4 cut(s)	9, 113, 114, 465
BssNAI	GTATAC	1 cut(s)	545
BssNI	GRCGYC	4 cut(s)	32, 38, 302, 1387
Bst1107I	GTATAC	1 cut(s)	545
Bst2UI	CCWGG	2 cut(s)	115, 161
Bst4CI	ACNGT	2 cut(s)	739, 977
Bst6I	CTCTTC	3 cut(s)	519, 531, 1464
BstACI	GRCGYC	4 cut(s)	32, 38, 302, 1387
BstAPI	GCANNNNNTGC	1 cut(s)	1241
BstC8I	GCNNGC	2 cut(s)	1246, 1368
BstDEI	CTNAG	5 cut(s)	437, 1050, 1310, 1347, 1460
BstF5I	GGATG	3 cut(s)	376, 895, 987
BstFNI	CGCG	1 cut(s)	1263
BstH2I	RGCGCY	1 cut(s)	1354
BstHHI	GCGC	2 cut(s)	1263, 1353
BstMWI	GCNNNNNNNGC	3 cut(s)	359, 1028, 1241
BstNI	CCWGG	2 cut(s)	115, 161
BstNSI	RCATGY	3 cut(s)	353, 421, 765
BstSCI	CCNGG	4 cut(s)	113, 159, 464, 465
BstUI	CGCG	1 cut(s)	1263
BstV1I	GCAGC	4 cut(s)	247, 615, 1244, 1286
BstV2I	GAAGAC	3 cut(s)	81, 479, 1297
BstX2I	RGATCY	4 cut(s)	337, 1190, 1342, 1405
BstYI	RGATCY	4 cut(s)	337, 1190, 1342, 1405
BstZ17I	GTATAC	1 cut(s)	545
Bsu15I	ATCGAT	1 cut(s)	999
BsuRI	GGCC	2 cut(s)	60, 464
BsuTUI	ATCGAT	1 cut(s)	999
BtgZI	GCGATG	1 cut(s)	621
BtrI	CACGTC	1 cut(s)	70
BtsCI	GGATG	3 cut(s)	376, 895, 987
BtsIMutI	CAGTG	2 cut(s)	778, 1318
Cac8I	GCNNGC	2 cut(s)	1246, 1368
CaiI	CAGNNNCTG	1 cut(s)	1362
CciI	TCATGA	1 cut(s)	48
CfoI	GCGC	2 cut(s)	1263, 1353
Cfr10I	RCCGGY	2 cut(s)	103, 298
Cfr13I	GGNCC	3 cut(s)	59, 463, 1129
Cfr9I	CCCGGG	1 cut(s)	465
ClaI	ATCGAT	1 cut(s)	999
CseI	GACGC	1 cut(s)	291
Csp6I	GTAC	2 cut(s)	1141, 1166
CviQI	GTAC	2 cut(s)	1141, 1166
DdeI	CTNAG	5 cut(s)	437, 1050, 1310, 1347, 1460
DraI	TTTAAA	1 cut(s)	366
DrdI	GACNNNNNNGTC	1 cut(s)	37
DseDI	GACNNNNNNGTC	1 cut(s)	37
Eam1104I	CTCTTC	3 cut(s)	519, 531, 1464
EarI	CTCTTC	3 cut(s)	519, 531, 1464
Eco47I	GGWCC	1 cut(s)	1129
Eco47III	AGCGCT	1 cut(s)	1352
Eco57I	CTGAAG	3 cut(s)	450, 512, 1339
Eco88I	CYCGRG	1 cut(s)	465
EcoRII	CCWGG	2 cut(s)	113, 159
EcoT22I	ATGCAT	1 cut(s)	1418
FaqI	GGGAC	3 cut(s)	131, 1142, 1461
FblI	GTMKAC	3 cut(s)	29, 35, 544
Fnu4HI	GCNGC	4 cut(s)	261, 604, 1233, 1275
FokI	GGATG	3 cut(s)	383, 902, 994
Fsp4HI	GCNGC	4 cut(s)	261, 604, 1233, 1275
FspBI	CTAG	2 cut(s)	756, 1194
GlaI	GCGC	2 cut(s)	1262, 1352
GluI	GCNGC	4 cut(s)	261, 604, 1233, 1275
GsuI	CTGGAG	1 cut(s)	467
HaeII	RGCGCY	1 cut(s)	1354
HaeIII	GGCC	2 cut(s)	60, 464
HapII	CCGG	3 cut(s)	104, 299, 466
HgaI	GACGC	1 cut(s)	291
HhaI	GCGC	2 cut(s)	1263, 1353
Hin1I	GRCGYC	4 cut(s)	32, 38, 302, 1387
Hin6I	GCGC	2 cut(s)	1261, 1351
HinP1I	GCGC	2 cut(s)	1261, 1351
HincII	GTYRAC	3 cut(s)	30, 36, 496
HindII	GTYRAC	3 cut(s)	30, 36, 496
HinfI	GANTC	1 cut(s)	1001
HpaII	CCGG	3 cut(s)	104, 299, 466
HphI	GGTGA	1 cut(s)	964
Hpy166II	GTNNAC	7 cut(s)	6, 30, 36, 496, 545, 581, 668
Hpy188I	TCNGA	8 cut(s)	313, 395, 519, 531, 835, 909, 981, 1463
Hpy188III	TCNNGA	9 cut(s)	49, 170, 207, 271, 1067, 1283, 1340, 1346, 1394
Hpy8I	GTNNAC	7 cut(s)	6, 30, 36, 496, 545, 581, 668
HpyAV	CCTTC	6 cut(s)	89, 145, 908, 962, 1098, 1181
HpyCH4III	ACNGT	2 cut(s)	739, 977
HpyCH4IV	ACGT	5 cut(s)	32, 38, 69, 623, 1387
HpyCH4V	TGCA	8 cut(s)	148, 621, 767, 1151, 1213, 1232, 1416, 1489
HpyF10VI	GCNNNNNNNGC	3 cut(s)	359, 1028, 1241
HpyF3I	CTNAG	5 cut(s)	437, 1050, 1310, 1347, 1460
HpySE526I	ACGT	5 cut(s)	32, 38, 69, 623, 1387
Hsp92I	GRCGYC	4 cut(s)	32, 38, 302, 1387
HspAI	GCGC	2 cut(s)	1261, 1351
KpnI	GGTACC	1 cut(s)	1144
LguI	GCTCTTC	2 cut(s)	531, 1464
Lsp1109I	GCAGC	4 cut(s)	247, 615, 1244, 1286
LweI	GCATC	2 cut(s)	861, 1317
MaeI	CTAG	2 cut(s)	756, 1194
MaeII	ACGT	5 cut(s)	32, 38, 69, 623, 1387
MaeIII	GTNAC	5 cut(s)	230, 636, 652, 713, 775
MboII	GAAGA	7 cut(s)	86, 479, 506, 518, 577, 1302, 1481
MflI	RGATCY	4 cut(s)	337, 1190, 1342, 1405
MhlI	GDGCHC	1 cut(s)	325
MmeI	TCCRAC	1 cut(s)	959
Mph1103I	ATGCAT	1 cut(s)	1418
MroXI	GAANNNNTTC	2 cut(s)	400, 1062
MseI	TTAA	5 cut(s)	222, 288, 365, 503, 783
MspI	CCGG	3 cut(s)	104, 299, 466
MspR9I	CCNGG	4 cut(s)	115, 161, 466, 467
MvaI	CCWGG	2 cut(s)	115, 161
MvnI	CGCG	1 cut(s)	1263
MwoI	GCNNNNNNNGC	3 cut(s)	359, 1028, 1241
NciI	CCSGG	2 cut(s)	466, 467
NlaIV	GGNNCC	4 cut(s)	339, 1015, 1130, 1142
NmuCI	GTSAC	3 cut(s)	230, 652, 775
NsiI	ATGCAT	1 cut(s)	1418
NspI	RCATGY	3 cut(s)	353, 421, 765
PagI	TCATGA	1 cut(s)	48
PasI	CCCWGGG	1 cut(s)	114
PciI	ACATGT	2 cut(s)	417, 761
PciSI	GCTCTTC	2 cut(s)	531, 1464
PcsI	WCGNNNNNNNCGW	5 cut(s)	29, 32, 35, 175, 1117
PdmI	GAANNNNTTC	2 cut(s)	400, 1062
PfeI	GAWTC	1 cut(s)	1001
PkrI	GCNGC	4 cut(s)	262, 605, 1234, 1276
PscI	ACATGT	2 cut(s)	417, 761
Psp6I	CCWGG	2 cut(s)	113, 159
PspGI	CCWGG	2 cut(s)	113, 159
PspN4I	GGNNCC	4 cut(s)	339, 1015, 1130, 1142
PspPI	GGNCC	3 cut(s)	59, 463, 1129
PstNI	CAGNNNCTG	1 cut(s)	1362
PsuI	RGATCY	4 cut(s)	337, 1190, 1342, 1405
RsaI	GTAC	2 cut(s)	1142, 1167
RsaNI	GTAC	2 cut(s)	1141, 1166
SalI	GTCGAC	2 cut(s)	28, 34
SapI	GCTCTTC	2 cut(s)	531, 1464
SaqAI	TTAA	5 cut(s)	222, 288, 365, 503, 783
SatI	GCNGC	4 cut(s)	261, 604, 1233, 1275
Sau96I	GGNCC	3 cut(s)	59, 463, 1129
ScrFI	CCNGG	4 cut(s)	115, 161, 466, 467
SduI	GDGCHC	1 cut(s)	325
SfaNI	GCATC	2 cut(s)	861, 1317
SgrDI	CGTCGACG	2 cut(s)	28, 34
SinI	GGWCC	1 cut(s)	1129
SmaI	CCCGGG	1 cut(s)	467
SmlI	CTYRAG	1 cut(s)	1298
SmoI	CTYRAG	1 cut(s)	1298
SsiI	CCGC	2 cut(s)	1061, 1263
SspMI	CTAG	2 cut(s)	756, 1194
StyD4I	CCNGG	4 cut(s)	113, 159, 464, 465
TaaI	ACNGT	2 cut(s)	739, 977
TaiI	ACGT	5 cut(s)	35, 41, 72, 626, 1390
TaqI	TCGA	9 cut(s)	29, 35, 169, 682, 937, 999, 1120, 1282, 1288
TaqII	GACCGA	1 cut(s)	68
TfiI	GAWTC	1 cut(s)	1001
Tru1I	TTAA	5 cut(s)	222, 288, 365, 503, 783
Tru9I	TTAA	5 cut(s)	222, 288, 365, 503, 783
TscAI	CASTG	2 cut(s)	778, 1318
TseFI	GTSAC	3 cut(s)	230, 652, 775
TseI	GCWGC	4 cut(s)	260, 603, 1232, 1274
Tsp45I	GTSAC	3 cut(s)	230, 652, 775
TspDTI	ATGAA	6 cut(s)	37, 108, 471, 479, 660, 736
TspGWI	ACGGA	1 cut(s)	340
TspMI	CCCGGG	1 cut(s)	465
TspRI	CASTG	2 cut(s)	778, 1318
VpaK11BI	GGWCC	1 cut(s)	1129
XapI	RAATTY	3 cut(s)	281, 532, 815
XceI	RCATGY	3 cut(s)	353, 421, 765
XmaI	CCCGGG	1 cut(s)	465
XmiI	GTMKAC	3 cut(s)	29, 35, 544
XmnI	GAANNNNTTC	2 cut(s)	400, 1062
XspI	CTAG	2 cut(s)	756, 1194
ZraI	GACGTC	3 cut(s)	33, 39, 1388
Zsp2I	ATGCAT	1 cut(s)	1418

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.