Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0009065

Physical Location & Seq

Genomic Coordinates Forward (+)

63806161 .. 63812138

Gene Structure 5978 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00271470.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1485 bp

ATGTCCGCCGAGGCAGAGCCGTCGTCGTCGTCGGGGTTCATGACCGACGGGCCTGATGACGTGGAAGACTACATTTCGGCTAATGAAGGAGAACCGGCACTGCCCTGGGACATATTTAGTCATGTTTTTGATCTTGTGCAGAAGGGAAACCAGGCTTTTCGAGAGAATCGATTTGAGGAGGCAATTAGTTGCTACACAAGAGCCAATTACATTAAACCATGTGACCCTGTTATTCTTGGCAACCGAACTGCTGCTTATATCAGGATCAGTAAATTCCTTAAACGCATACCGGCATCGGCTTCTGAATATAGAGCACGGACTGGATTGGATCCTACAATACATGCTGAACTTGCTTTAAAGGATGTGGAGAAGCTAATCAACCTCCGAAGTAATTCAGCAAAACCATACATGTTGAAAGCTGAAGCTCTAAGTTTGCTGGAGAAATATGAAATGGCCCGGGATATTATCTTATGTGGTCTTCATGTTGACCCTTTAAGCAATCCTCTTCGGACAGCTCTTCAGAATTTGGAGAGTATACAAGTTAGCATGACAGGGAAGAGAAGCCATAGTAAACCAGAACGCAAAGCAGAACGCAGCAATGATTTTGATTGCACGTTATGTTTCAAGTTACTCTATGAACCTGTGACAACGCCTTGTGGACATTCCTTTTGTCGATCTTGCTTATTTCAGTCAATGGATCGAGGTAACAAATGTCCATTATGCCGAACCGTTCTGTTCATTAGTCCTAGAACATGTGCAATCAGTGTGACACTTAACGACATTATACAAAAGAACTTCCCAGAGGAATTTGCTGAAAGGAAGTCAGAGAATGACACAATGACAAACTTTGGTGCTGATTTGATGCCACTCTTTGTAATGGATGTTGTCCTTCCTTTTCAGAAGTTTCCACTACACATTTTTGAGCCTCGATATAGACTTATGGTGAGGAGGATAATGGAAGGCAACCATCGGATGGGAATGGTCATCATCGATTCTACAACAGGTTCCATAGCTGATTTTGCATGTGAGGTGGAAATTACTGAGTGCGAACCGCTTCCAGATGGGCGTTTCTATTTAGAGATTGAAAGTCGCCGAAGGTTTCGTATAATTCGATCTTGGGACCAAGATGGGTACCGAGTTGCAGAGATTGAATGGGTACAGGATATATGCCCACCAGAAGGATCTAGAGAGAGAACAGAATTGCAGGAATTGACGAATAATGCAGCAGAATATGCTCGCTTATGGATAGGGCGCGGTAAAAGAGCAGCAAGTCGAGATCGAAGACGACTTGAGAAACTTCTCAGTGTAGAAGCAAAGATGCCATCAGTTCAAGATTCTGAGCGCTTCAGCTTCTGGCTGGCTTCCCTTTCAAACCGACGTCCTCACGAAAGATTGGATCTCTTACGCATGAGAGATACAAAAGAGAGAATACAACGGGGACTAATATATCTCAGAGCAGAAGAGCAAGGTTGTCAAGTGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009705 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010959 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019725 GO:0021700 GO:0022622 GO:0030154 GO:0031090 GO:0032501 GO:0032502 GO:0032879 GO:0036211 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0051049 GO:0051924 GO:0055082 GO:0065007 GO:0065008 GO:0071695 GO:0071704 GO:0080147 GO:0090558 GO:0090627 GO:0097272 GO:0097275 GO:0098588 GO:0098805 GO:0099402 GO:0140096 GO:1901564 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LON_substr_bdg Malectin_like Pkinase_Tyr zf-C3HC4_2

Protein Analysis

494

Amino Acids

56.87

Weight (kDa)

6.51

Isoelectric Point (pI)

51.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-C3HC4_3	PF13920	202 - 243	9.2e-08	Zinc finger, C3HC4 type (RING finger)
zf-RING_2	PF13639	203 - 242	4.4e-08	Ring finger domain
zf-C3HC4_2	PF13923	204 - 241	7.6e-13	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	204 - 241	6.4e-10	Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX	PF13445	204 - 239	2e-08	RING-type zinc-finger
zf-RING_5	PF14634	204 - 243	2.1e-06	zinc-RING finger domain
zf-C3HC4_4	PF15227	204 - 241	2.2e-06	zinc finger of C3HC4-type, RING
LON_substr_bdg	PF02190	288 - 484	2e-26	ATP-dependent protease La (LON) substrate-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009065)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18660 AT1G18660 AT1G18660 AT1G18660
fragaria_vesca	FvH4_5g14510 FvH4_5g14510 FvH4_5g14510
malus_domestica	MD06G1197800.v1.1 MD14G1205300.v1.1
prunus_persica	Prupe.5G198700_v2.0.a1 Prupe.5G198700_v2.0.a1
pyrus_communis	pycom06g17480 pycom14g16990
rosa_chinensis	RchiOBHm_Chr7g0182141
rosa_laevigata	RLG00000005147
rosa_multiflora	Rmu_co8332863.1_g000001
rosa_roxburghii	Rroxscaffold_3G00271470
rosa_samantha	Rh7AG048700 Rh7BG048600 Rh7CG050000 Rh7DG047900
rosa_wichuraiana	Rw0G021030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1381
Acc65I	GGTACC	1 cut(s)	1131
AccB1I	GGYRCC	1 cut(s)	1131
AccB7I	CCANNNNNTGG	1 cut(s)	973
AccI	GTMKAC	1 cut(s)	535
AccII	CGCG	1 cut(s)	1254
AciI	CCGC	3 cut(s)	6, 1052, 1254
AclWI	GGATC	6 cut(s)	272, 323, 336, 705, 1189, 1404
AcsI	RAATTY	3 cut(s)	272, 523, 806
AcuI	CTGAAG	3 cut(s)	441, 503, 1330
AcyI	GRCGYC	1 cut(s)	1378
AfaI	GTAC	2 cut(s)	1133, 1158
AfeI	AGCGCT	1 cut(s)	1343
AfiI	CCNNNNNNNGG	2 cut(s)	973, 1178
AflIII	ACRYGT	2 cut(s)	408, 752
AgsI	TTSAA	6 cut(s)	415, 625, 1085, 1151, 1331, 1371
AjiI	CACGTC	1 cut(s)	61
AjnI	CCWGG	2 cut(s)	104, 150
AluBI	AGCT	6 cut(s)	373, 419, 425, 515, 1013, 1350
AluI	AGCT	6 cut(s)	373, 419, 425, 515, 1013, 1350
Alw21I	GWGCWC	1 cut(s)	316
AlwI	GGATC	6 cut(s)	272, 323, 336, 705, 1189, 1404
AlwNI	CAGNNNCTG	1 cut(s)	1353
Ama87I	CYCGRG	1 cut(s)	456
Aor51HI	AGCGCT	1 cut(s)	1343
AoxI	GGCC	2 cut(s)	50, 453
ApeKI	GCWGC	4 cut(s)	251, 594, 1223, 1265
ApoI	RAATTY	3 cut(s)	272, 523, 806
ArsI	GACNNNNNNTTYG	2 cut(s)	651, 683
Asp700I	GAANNNNTTC	2 cut(s)	391, 1053
Asp718I	GGTACC	1 cut(s)	1131
AspLEI	GCGC	2 cut(s)	1254, 1344
AspS9I	GGNCC	3 cut(s)	50, 454, 1120
AsuC2I	CCSGG	2 cut(s)	457, 458
AsuHPI	GGTGA	1 cut(s)	955
AvaI	CYCGRG	1 cut(s)	456
AvaII	GGWCC	1 cut(s)	1120
BamHI	GGATCC	1 cut(s)	328
BanI	GGYRCC	1 cut(s)	1131
BbsI	GAAGAC	3 cut(s)	72, 470, 1288
Bbv12I	GWGCWC	1 cut(s)	316
BbvI	GCAGC	4 cut(s)	238, 606, 1235, 1277
BccI	CCATC	5 cut(s)	967, 975, 1055, 1121, 1330
BceAI	ACGGC	1 cut(s)	4
BcgI	CGANNNNNNTGC	1 cut(s)	37
BciT130I	CCWGG	2 cut(s)	106, 152
BcnI	CCSGG	2 cut(s)	457, 458
BfaI	CTAG	2 cut(s)	747, 1185
BfoI	RGCGCY	1 cut(s)	1345
BisI	GCNGC	4 cut(s)	252, 595, 1224, 1266
BlsI	GCNGC	4 cut(s)	253, 596, 1225, 1267
Bme1390I	CCNGG	4 cut(s)	106, 152, 457, 458
Bme18I	GGWCC	1 cut(s)	1120
BmeT110I	CYCGRG	1 cut(s)	456
BmgBI	CACGTC	1 cut(s)	61
BmgT120I	GGNCC	3 cut(s)	50, 454, 1120
BmiI	GGNNCC	4 cut(s)	330, 1006, 1121, 1133
BmrFI	CCNGG	4 cut(s)	106, 152, 457, 458
BmsI	GCATC	3 cut(s)	302, 852, 1308
BpiI	GAAGAC	3 cut(s)	72, 470, 1288
BpmI	CTGGAG	1 cut(s)	458
BpuEI	CTTGAG	1 cut(s)	1310
BpuMI	CCSGG	2 cut(s)	457, 458
Bsa29I	ATCGAT	2 cut(s)	169, 990
BsaHI	GRCGYC	1 cut(s)	1378
BsaJI	CCNNGG	4 cut(s)	9, 104, 105, 456
Bsc4I	CCNNNNNNNGG	2 cut(s)	973, 1178
Bse118I	RCCGGY	2 cut(s)	94, 289
Bse1I	ACTGG	1 cut(s)	325
Bse3DI	GCAATG	1 cut(s)	604
BseBI	CCWGG	2 cut(s)	106, 152
BseCI	ATCGAT	2 cut(s)	169, 990
BseDI	CCNNGG	4 cut(s)	9, 104, 105, 456
BseGI	GGATG	3 cut(s)	367, 886, 978
BseLI	CCNNNNNNNGG	2 cut(s)	973, 1178
BseMI	GCAATG	1 cut(s)	604
BseMII	CTCAG	4 cut(s)	1032, 1315, 1329, 1465
BseNI	ACTGG	1 cut(s)	325
BseRI	GAGGAG	2 cut(s)	191, 961
BseXI	GCAGC	4 cut(s)	238, 606, 1235, 1277
BsgI	GTGCAG	1 cut(s)	158
Bsh1236I	CGCG	1 cut(s)	1254
BshFI	GGCC	2 cut(s)	52, 455
BshNI	GGYRCC	1 cut(s)	1131
BshVI	ATCGAT	2 cut(s)	169, 990
BsiHKAI	GWGCWC	1 cut(s)	316
BsiHKCI	CYCGRG	1 cut(s)	456
BsiSI	CCGG	3 cut(s)	95, 290, 457
BslFI	GGGAC	3 cut(s)	122, 1133, 1452
BslI	CCNNNNNNNGG	2 cut(s)	973, 1178
BsmFI	GGGAC	3 cut(s)	122, 1133, 1452
BsnI	GGCC	2 cut(s)	52, 455
BsoBI	CYCGRG	1 cut(s)	456
Bsp1286I	GDGCHC	1 cut(s)	316
Bsp143I	GATC	9 cut(s)	130, 264, 328, 674, 697, 1112, 1181, 1276, 1396
BspACI	CCGC	3 cut(s)	6, 1052, 1254
BspANI	GGCC	2 cut(s)	52, 455
BspCNI	CTCAG	4 cut(s)	1033, 1314, 1330, 1464
BspDI	ATCGAT	2 cut(s)	169, 990
BspFNI	CGCG	1 cut(s)	1254
BspHI	TCATGA	1 cut(s)	39
BspLI	GGNNCC	4 cut(s)	330, 1006, 1121, 1133
BspPI	GGATC	6 cut(s)	272, 323, 336, 705, 1189, 1404
BspQI	GCTCTTC	2 cut(s)	522, 1455
BspT107I	GGYRCC	1 cut(s)	1131
BsrDI	GCAATG	1 cut(s)	604
BsrFI	RCCGGY	2 cut(s)	94, 289
BsrI	ACTGG	1 cut(s)	325
BssAI	RCCGGY	2 cut(s)	94, 289
BssECI	CCNNGG	4 cut(s)	9, 104, 105, 456
BssMI	GATC	9 cut(s)	130, 264, 328, 674, 697, 1112, 1181, 1276, 1396
BssNAI	GTATAC	1 cut(s)	536
BssNI	GRCGYC	1 cut(s)	1378
Bst1107I	GTATAC	1 cut(s)	536
Bst2UI	CCWGG	2 cut(s)	106, 152
Bst4CI	ACNGT	1 cut(s)	730
Bst6I	CTCTTC	4 cut(s)	510, 522, 551, 1455
BstACI	GRCGYC	1 cut(s)	1378
BstAPI	GCANNNNNTGC	1 cut(s)	1232
BstC8I	GCNNGC	2 cut(s)	1237, 1359
BstDEI	CTNAG	5 cut(s)	428, 1041, 1301, 1338, 1451
BstF5I	GGATG	3 cut(s)	367, 886, 978
BstFNI	CGCG	1 cut(s)	1254
BstH2I	RGCGCY	1 cut(s)	1345
BstHHI	GCGC	2 cut(s)	1254, 1344
BstKTI	GATC	9 cut(s)	133, 267, 331, 677, 700, 1115, 1184, 1279, 1399
BstMBI	GATC	9 cut(s)	130, 264, 328, 674, 697, 1112, 1181, 1276, 1396
BstMWI	GCNNNNNNNGC	3 cut(s)	350, 1019, 1232
BstNI	CCWGG	2 cut(s)	106, 152
BstNSI	RCATGY	4 cut(s)	344, 412, 756, 1026
BstSCI	CCNGG	4 cut(s)	104, 150, 455, 456
BstUI	CGCG	1 cut(s)	1254
BstV1I	GCAGC	4 cut(s)	238, 606, 1235, 1277
BstV2I	GAAGAC	3 cut(s)	72, 470, 1288
BstX2I	RGATCY	3 cut(s)	328, 1181, 1396
BstYI	RGATCY	3 cut(s)	328, 1181, 1396
BstZ17I	GTATAC	1 cut(s)	536
Bsu15I	ATCGAT	2 cut(s)	169, 990
BsuRI	GGCC	2 cut(s)	52, 455
BsuTUI	ATCGAT	2 cut(s)	169, 990
BtrI	CACGTC	1 cut(s)	61
BtsCI	GGATG	3 cut(s)	367, 886, 978
BtsI	GCAGTG	1 cut(s)	98
BtsIMutI	CAGTG	3 cut(s)	98, 769, 1309
Cac8I	GCNNGC	2 cut(s)	1237, 1359
CaiI	CAGNNNCTG	1 cut(s)	1353
CciI	TCATGA	1 cut(s)	39
CfoI	GCGC	2 cut(s)	1254, 1344
Cfr10I	RCCGGY	2 cut(s)	94, 289
Cfr13I	GGNCC	3 cut(s)	50, 454, 1120
Cfr9I	CCCGGG	1 cut(s)	456
ClaI	ATCGAT	2 cut(s)	169, 990
Csp6I	GTAC	2 cut(s)	1132, 1157
CviQI	GTAC	2 cut(s)	1132, 1157
DdeI	CTNAG	5 cut(s)	428, 1041, 1301, 1338, 1451
DpnI	GATC	9 cut(s)	132, 266, 330, 676, 699, 1114, 1183, 1278, 1398
DpnII	GATC	9 cut(s)	130, 264, 328, 674, 697, 1112, 1181, 1276, 1396
DraI	TTTAAA	1 cut(s)	357
Eam1104I	CTCTTC	4 cut(s)	510, 522, 551, 1455
EarI	CTCTTC	4 cut(s)	510, 522, 551, 1455
Eco47I	GGWCC	1 cut(s)	1120
Eco47III	AGCGCT	1 cut(s)	1343
Eco57I	CTGAAG	3 cut(s)	441, 503, 1330
Eco88I	CYCGRG	1 cut(s)	456
EcoRII	CCWGG	2 cut(s)	104, 150
FaqI	GGGAC	3 cut(s)	122, 1133, 1452
FblI	GTMKAC	1 cut(s)	535
Fnu4HI	GCNGC	4 cut(s)	252, 595, 1224, 1266
FokI	GGATG	3 cut(s)	374, 893, 985
Fsp4HI	GCNGC	4 cut(s)	252, 595, 1224, 1266
FspBI	CTAG	2 cut(s)	747, 1185
GlaI	GCGC	2 cut(s)	1253, 1343
GluI	GCNGC	4 cut(s)	252, 595, 1224, 1266
GsuI	CTGGAG	1 cut(s)	458
HaeII	RGCGCY	1 cut(s)	1345
HaeIII	GGCC	2 cut(s)	52, 455
HapII	CCGG	3 cut(s)	95, 290, 457
HhaI	GCGC	2 cut(s)	1254, 1344
Hin1I	GRCGYC	1 cut(s)	1378
Hin6I	GCGC	2 cut(s)	1252, 1342
HinP1I	GCGC	2 cut(s)	1252, 1342
HincII	GTYRAC	1 cut(s)	487
HindII	GTYRAC	1 cut(s)	487
HinfI	GANTC	3 cut(s)	166, 992, 1334
HpaII	CCGG	3 cut(s)	95, 290, 457
HphI	GGTGA	1 cut(s)	955
Hpy166II	GTNNAC	4 cut(s)	487, 536, 572, 659
Hpy188I	TCNGA	9 cut(s)	304, 386, 510, 522, 826, 900, 972, 1339, 1454
Hpy188III	TCNNGA	8 cut(s)	40, 161, 262, 1058, 1185, 1274, 1331, 1385
Hpy8I	GTNNAC	4 cut(s)	487, 536, 572, 659
Hpy99I	CGWCG	6 cut(s)	25, 28, 31, 34, 50, 1380
HpyAV	CCTTC	6 cut(s)	80, 136, 899, 953, 1089, 1172
HpyCH4III	ACNGT	1 cut(s)	730
HpyCH4IV	ACGT	3 cut(s)	60, 614, 1378
HpyCH4V	TGCA	8 cut(s)	139, 612, 758, 1022, 1142, 1204, 1223, 1480
HpyF10VI	GCNNNNNNNGC	3 cut(s)	350, 1019, 1232
HpyF3I	CTNAG	5 cut(s)	428, 1041, 1301, 1338, 1451
HpySE526I	ACGT	3 cut(s)	60, 614, 1378
Hsp92I	GRCGYC	1 cut(s)	1378
HspAI	GCGC	2 cut(s)	1252, 1342
KpnI	GGTACC	1 cut(s)	1135
Kzo9I	GATC	9 cut(s)	130, 264, 328, 674, 697, 1112, 1181, 1276, 1396
LguI	GCTCTTC	2 cut(s)	522, 1455
Lsp1109I	GCAGC	4 cut(s)	238, 606, 1235, 1277
LweI	GCATC	3 cut(s)	302, 852, 1308
MaeI	CTAG	2 cut(s)	747, 1185
MaeII	ACGT	3 cut(s)	60, 614, 1378
MaeIII	GTNAC	5 cut(s)	221, 627, 643, 704, 766
MalI	GATC	9 cut(s)	132, 266, 330, 676, 699, 1114, 1183, 1278, 1398
MboI	GATC	9 cut(s)	130, 264, 328, 674, 697, 1112, 1181, 1276, 1396
MboII	GAAGA	7 cut(s)	77, 470, 497, 509, 568, 1293, 1472
MflI	RGATCY	3 cut(s)	328, 1181, 1396
MhlI	GDGCHC	1 cut(s)	316
MroXI	GAANNNNTTC	2 cut(s)	391, 1053
MseI	TTAA	5 cut(s)	213, 279, 356, 494, 774
MspI	CCGG	3 cut(s)	95, 290, 457
MspR9I	CCNGG	4 cut(s)	106, 152, 457, 458
MvaI	CCWGG	2 cut(s)	106, 152
MvnI	CGCG	1 cut(s)	1254
MwoI	GCNNNNNNNGC	3 cut(s)	350, 1019, 1232
NciI	CCSGG	2 cut(s)	457, 458
NdeII	GATC	9 cut(s)	130, 264, 328, 674, 697, 1112, 1181, 1276, 1396
NlaIV	GGNNCC	4 cut(s)	330, 1006, 1121, 1133
NmeAIII	GCCGAG	1 cut(s)	34
NmuCI	GTSAC	3 cut(s)	221, 643, 766
NspI	RCATGY	4 cut(s)	344, 412, 756, 1026
PagI	TCATGA	1 cut(s)	39
PasI	CCCWGGG	1 cut(s)	105
PciI	ACATGT	2 cut(s)	408, 752
PciSI	GCTCTTC	2 cut(s)	522, 1455
PcsI	WCGNNNNNNNCGW	2 cut(s)	166, 1108
PdmI	GAANNNNTTC	2 cut(s)	391, 1053
PfeI	GAWTC	3 cut(s)	166, 992, 1334
PflMI	CCANNNNNTGG	1 cut(s)	973
PkrI	GCNGC	4 cut(s)	253, 596, 1225, 1267
PscI	ACATGT	2 cut(s)	408, 752
Psp6I	CCWGG	2 cut(s)	104, 150
PspGI	CCWGG	2 cut(s)	104, 150
PspN4I	GGNNCC	4 cut(s)	330, 1006, 1121, 1133
PspPI	GGNCC	3 cut(s)	50, 454, 1120
PstNI	CAGNNNCTG	1 cut(s)	1353
PsuI	RGATCY	3 cut(s)	328, 1181, 1396
RsaI	GTAC	2 cut(s)	1133, 1158
RsaNI	GTAC	2 cut(s)	1132, 1157
SapI	GCTCTTC	2 cut(s)	522, 1455
SaqAI	TTAA	5 cut(s)	213, 279, 356, 494, 774
SatI	GCNGC	4 cut(s)	252, 595, 1224, 1266
Sau3AI	GATC	9 cut(s)	130, 264, 328, 674, 697, 1112, 1181, 1276, 1396
Sau96I	GGNCC	3 cut(s)	50, 454, 1120
ScrFI	CCNGG	4 cut(s)	106, 152, 457, 458
SduI	GDGCHC	1 cut(s)	316
SfaNI	GCATC	3 cut(s)	302, 852, 1308
SinI	GGWCC	1 cut(s)	1120
SmaI	CCCGGG	1 cut(s)	458
SmlI	CTYRAG	1 cut(s)	1289
SmoI	CTYRAG	1 cut(s)	1289
SsiI	CCGC	3 cut(s)	6, 1052, 1254
SspMI	CTAG	2 cut(s)	747, 1185
StyD4I	CCNGG	4 cut(s)	104, 150, 455, 456
TaaI	ACNGT	1 cut(s)	730
TaiI	ACGT	3 cut(s)	63, 617, 1381
TaqI	TCGA	9 cut(s)	160, 169, 673, 700, 928, 990, 1111, 1273, 1279
TaqII	GACCGA	1 cut(s)	59
TfiI	GAWTC	3 cut(s)	166, 992, 1334
Tru1I	TTAA	5 cut(s)	213, 279, 356, 494, 774
Tru9I	TTAA	5 cut(s)	213, 279, 356, 494, 774
TscAI	CASTG	3 cut(s)	105, 769, 1309
TseFI	GTSAC	3 cut(s)	221, 643, 766
TseI	GCWGC	4 cut(s)	251, 594, 1223, 1265
Tsp45I	GTSAC	3 cut(s)	221, 643, 766
TspDTI	ATGAA	6 cut(s)	28, 99, 462, 470, 651, 727
TspGWI	ACGGA	1 cut(s)	331
TspMI	CCCGGG	1 cut(s)	456
TspRI	CASTG	3 cut(s)	105, 769, 1309
Van91I	CCANNNNNTGG	1 cut(s)	973
VpaK11BI	GGWCC	1 cut(s)	1120
XapI	RAATTY	3 cut(s)	272, 523, 806
XbaI	TCTAGA	1 cut(s)	1184
XceI	RCATGY	4 cut(s)	344, 412, 756, 1026
XmaI	CCCGGG	1 cut(s)	456
XmiI	GTMKAC	1 cut(s)	535
XmnI	GAANNNNTTC	2 cut(s)	391, 1053
XspI	CTAG	2 cut(s)	747, 1185
ZraI	GACGTC	1 cut(s)	1379

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.