Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0009065

Physical Location & Seq

Genomic Coordinates Reverse (-)

3362353 .. 3367567

Gene Structure 5215 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG048700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1401 bp

ATGTCCACCGAGGCAGAGCCGTCGTCGTCATCGTCGTCGTCGACGTCGGGGTTCATGACCGACGGCCCTGATGACGTGGAAGACTACATTTCGGCAATTAGCTGCTACTCAAGAGCCAATTACATTAAACCATGTGACCCTGTTATTCTTGGCAACCGAACTGCTGCTTATATCAGGATCAGTAAATTCCTTAAACGCATACCGGCGTCGGCTTCTGAATATAGAGCACGGACTGGATTGGATCCTACAATACATGCTGAACTTGCTTTAAAGGATGTGGAGAAGCTAATCAACCTCCGAAGTAATTCAGCAAAACCATACATGTTGAAAGCTGAAGCTCTAAGTTTGCTGGAGAAATATGAAATGGCCCGGGATATTATCTTATGTGGTCTTCATGTTGACCCTTTAAGTAGCAATCCTCTTCGGACAGCTCTTCAGAATTTGGAGAGTATACAAGTTAGCATGACAGGGAAGATAAGCCATAGTAAACCAGAACGAAAAGCAGAACGCAGCGATGATTTTGATTGCACGTTATGTTTCAAGTTACTCTATGAACCTGTGACAACGCCTTGTGGACATTCCTTTTGTCGATCATGCTTGTTTCAGTCAATGGATCAAGGTAACAAATGTCCATTATGCCGAACCGTTCTGTTCATTAGTCCTAGAACATGTGCAATCAGTGTGACACTTAACGACATTATACAAAAGAACTTCCCAGAGGAATTTGCTGAAAGGAAGTCAGAGAATGACACAATGACAAACTTTGGTGCTGATTTGATGCCACTCTTTGTAATGGATGTTGTCCTTCCTTTTCAGAAGTTTCCACTACACATTTTTGAGCCTCGATATAGACTTATGGTGAGGAGGATAATGGAAGGCAATCGTCGGATGGGAATGGTCATCATCGATTCTACAACAGGTTCCATAGCTGATTTTGCTTGTGAGGTGGAAATTACTGAGTGCGAACCGCTTCCAGATGGGCGTTTCTATTTAGAGATTGAAAGTCGCCGAAGGTTTCGCATAATTCGATCTTGGGACCAAGATGGGTACCGAGTTGCAGAGATTGAATGGGTACAGGATATATGCCCACCAGAAGGATCTAGTGAGAGAACGGAATTGCAGGAATTGACGAATAATGCAGCAGAATATGCTCGCTTATGGATAGGGCGCGGTAAAAGAGCAGCAAGTCGAGATCGAAGACGACTTGAGAAACTTCTCAGCGTAGAAGCAATGATGCCATCAGTTCAAGATCCTGAGCGCTTCAGCTTCTGGCTGGCTTCCCTTTCAAACCGGCGTCCTCACGAAAGATTGGATCTCTTATGCATGAGAGATACAAAAGAGAGAATACAACGGGGACTAATATATCTCAAAGCAGAAGAGCAAGGTTGTCAAGTGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009705 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010959 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019725 GO:0021700 GO:0022622 GO:0030154 GO:0031090 GO:0032501 GO:0032502 GO:0032879 GO:0036211 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0051049 GO:0051924 GO:0055082 GO:0065007 GO:0065008 GO:0071695 GO:0071704 GO:0080147 GO:0090558 GO:0090627 GO:0097272 GO:0097275 GO:0098588 GO:0098805 GO:0099402 GO:0140096 GO:1901564 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LON_substr_bdg Malectin_like Pkinase_Tyr zf-C3HC4_2

Protein Analysis

466

Amino Acids

53.26

Weight (kDa)

6.19

Isoelectric Point (pI)

54.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-C3HC4_3	PF13920	174 - 215	3.8e-08	Zinc finger, C3HC4 type (RING finger)
zf-RING_2	PF13639	175 - 214	3.4e-08	Ring finger domain
zf-C3HC4_2	PF13923	176 - 213	4.4e-13	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	176 - 213	9.4e-10	Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX	PF13445	176 - 211	2.3e-08	RING-type zinc-finger
zf-RING_5	PF14634	176 - 215	1.2e-06	zinc-RING finger domain
zf-C3HC4_4	PF15227	176 - 213	1.8e-06	zinc finger of C3HC4-type, RING
LON_substr_bdg	PF02190	260 - 457	4.1e-28	ATP-dependent protease La (LON) substrate-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0009065)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18660 AT1G18660 AT1G18660 AT1G18660
fragaria_vesca	FvH4_5g14510 FvH4_5g14510 FvH4_5g14510
malus_domestica	MD06G1197800.v1.1 MD14G1205300.v1.1
prunus_persica	Prupe.5G198700_v2.0.a1 Prupe.5G198700_v2.0.a1
pyrus_communis	pycom06g17480 pycom14g16990
rosa_chinensis	RchiOBHm_Chr7g0182141
rosa_laevigata	RLG00000005147
rosa_multiflora	Rmu_co8332863.1_g000001
rosa_roxburghii	Rroxscaffold_3G00271470
rosa_samantha	Rh7AG048700 Rh7BG048600 Rh7CG050000 Rh7DG047900
rosa_wichuraiana	Rw0G021030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	47
Acc65I	GGTACC	1 cut(s)	1047
AccB1I	GGYRCC	1 cut(s)	1047
AccI	GTMKAC	2 cut(s)	41, 451
AccII	CGCG	1 cut(s)	1170
AciI	CCGC	2 cut(s)	968, 1170
AclWI	GGATC	7 cut(s)	185, 236, 249, 621, 1105, 1244, 1320
AcsI	RAATTY	3 cut(s)	185, 439, 722
AcuI	CTGAAG	3 cut(s)	354, 419, 1246
AcyI	GRCGYC	3 cut(s)	44, 206, 1294
AfaI	GTAC	2 cut(s)	1049, 1074
AfeI	AGCGCT	1 cut(s)	1259
AfiI	CCNNNNNNNGG	1 cut(s)	1094
AflIII	ACRYGT	2 cut(s)	321, 668
AgsI	TTSAA	6 cut(s)	328, 541, 1001, 1067, 1247, 1287
AjiI	CACGTC	1 cut(s)	76
AluBI	AGCT	7 cut(s)	102, 286, 332, 338, 431, 929, 1266
AluI	AGCT	7 cut(s)	102, 286, 332, 338, 431, 929, 1266
Alw21I	GWGCWC	1 cut(s)	229
AlwI	GGATC	7 cut(s)	185, 236, 249, 621, 1105, 1244, 1320
AlwNI	CAGNNNCTG	1 cut(s)	1269
Ama87I	CYCGRG	1 cut(s)	369
Aor51HI	AGCGCT	1 cut(s)	1259
AoxI	GGCC	2 cut(s)	64, 366
ApeKI	GCWGC	5 cut(s)	102, 164, 510, 1139, 1181
ApoI	RAATTY	3 cut(s)	185, 439, 722
ArsI	GACNNNNNNTTYG	2 cut(s)	567, 599
Asp700I	GAANNNNTTC	2 cut(s)	304, 969
Asp718I	GGTACC	1 cut(s)	1047
AspLEI	GCGC	2 cut(s)	1170, 1260
AspS9I	GGNCC	3 cut(s)	65, 367, 1036
AsuC2I	CCSGG	2 cut(s)	370, 371
AsuHPI	GGTGA	1 cut(s)	871
AvaI	CYCGRG	1 cut(s)	369
AvaII	GGWCC	1 cut(s)	1036
BamHI	GGATCC	1 cut(s)	241
BanI	GGYRCC	1 cut(s)	1047
BbsI	GAAGAC	3 cut(s)	87, 383, 1204
Bbv12I	GWGCWC	1 cut(s)	229
BbvI	GCAGC	5 cut(s)	89, 151, 522, 1151, 1193
BccI	CCATC	4 cut(s)	883, 971, 1037, 1246
BceAI	ACGGC	2 cut(s)	4, 79
BcgI	CGANNNNNNTGC	1 cut(s)	37
BcnI	CCSGG	2 cut(s)	370, 371
BfaI	CTAG	2 cut(s)	663, 1101
BfoI	RGCGCY	1 cut(s)	1261
BisI	GCNGC	5 cut(s)	103, 165, 511, 1140, 1182
BlsI	GCNGC	5 cut(s)	104, 166, 512, 1141, 1183
Bme1390I	CCNGG	2 cut(s)	370, 371
Bme18I	GGWCC	1 cut(s)	1036
BmeT110I	CYCGRG	1 cut(s)	369
BmgBI	CACGTC	1 cut(s)	76
BmgT120I	GGNCC	3 cut(s)	65, 367, 1036
BmiI	GGNNCC	4 cut(s)	243, 922, 1037, 1049
BmrFI	CCNGG	2 cut(s)	370, 371
BmsI	GCATC	2 cut(s)	768, 1224
BpiI	GAAGAC	3 cut(s)	87, 383, 1204
BpmI	CTGGAG	1 cut(s)	371
Bpu10I	CCTNAGC	1 cut(s)	1254
BpuEI	CTTGAG	2 cut(s)	94, 1226
BpuMI	CCSGG	2 cut(s)	370, 371
Bsa29I	ATCGAT	1 cut(s)	906
BsaHI	GRCGYC	3 cut(s)	44, 206, 1294
BsaJI	CCNNGG	2 cut(s)	9, 369
Bsc4I	CCNNNNNNNGG	1 cut(s)	1094
Bse118I	RCCGGY	2 cut(s)	202, 1290
Bse1I	ACTGG	1 cut(s)	238
Bse3DI	GCAATG	1 cut(s)	1236
BseCI	ATCGAT	1 cut(s)	906
BseDI	CCNNGG	2 cut(s)	9, 369
BseGI	GGATG	3 cut(s)	280, 802, 894
BseLI	CCNNNNNNNGG	1 cut(s)	1094
BseMI	GCAATG	1 cut(s)	1236
BseMII	CTCAG	3 cut(s)	948, 1231, 1245
BseNI	ACTGG	1 cut(s)	238
BseRI	GAGGAG	1 cut(s)	877
BseXI	GCAGC	5 cut(s)	89, 151, 522, 1151, 1193
Bsh1236I	CGCG	1 cut(s)	1170
BshFI	GGCC	2 cut(s)	66, 368
BshNI	GGYRCC	1 cut(s)	1047
BshVI	ATCGAT	1 cut(s)	906
BsiHKAI	GWGCWC	1 cut(s)	229
BsiHKCI	CYCGRG	1 cut(s)	369
BsiSI	CCGG	3 cut(s)	203, 370, 1291
BslFI	GGGAC	2 cut(s)	1049, 1368
BslI	CCNNNNNNNGG	1 cut(s)	1094
BsmFI	GGGAC	2 cut(s)	1049, 1368
BsnI	GGCC	2 cut(s)	66, 368
BsoBI	CYCGRG	1 cut(s)	369
Bsp1286I	GDGCHC	1 cut(s)	229
Bsp143I	GATC	9 cut(s)	177, 241, 590, 613, 1028, 1097, 1192, 1249, 1312
BspACI	CCGC	2 cut(s)	968, 1170
BspANI	GGCC	2 cut(s)	66, 368
BspCNI	CTCAG	3 cut(s)	949, 1230, 1246
BspDI	ATCGAT	1 cut(s)	906
BspFNI	CGCG	1 cut(s)	1170
BspHI	TCATGA	1 cut(s)	54
BspLI	GGNNCC	4 cut(s)	243, 922, 1037, 1049
BspPI	GGATC	7 cut(s)	185, 236, 249, 621, 1105, 1244, 1320
BspQI	GCTCTTC	2 cut(s)	438, 1371
BspT107I	GGYRCC	1 cut(s)	1047
BsrDI	GCAATG	1 cut(s)	1236
BsrFI	RCCGGY	2 cut(s)	202, 1290
BsrI	ACTGG	1 cut(s)	238
BssAI	RCCGGY	2 cut(s)	202, 1290
BssECI	CCNNGG	2 cut(s)	9, 369
BssMI	GATC	9 cut(s)	177, 241, 590, 613, 1028, 1097, 1192, 1249, 1312
BssNAI	GTATAC	1 cut(s)	452
BssNI	GRCGYC	3 cut(s)	44, 206, 1294
Bst1107I	GTATAC	1 cut(s)	452
Bst4CI	ACNGT	1 cut(s)	646
Bst6I	CTCTTC	3 cut(s)	426, 438, 1371
BstACI	GRCGYC	3 cut(s)	44, 206, 1294
BstAPI	GCANNNNNTGC	1 cut(s)	1148
BstC8I	GCNNGC	2 cut(s)	1153, 1275
BstDEI	CTNAG	4 cut(s)	341, 957, 1217, 1254
BstF5I	GGATG	3 cut(s)	280, 802, 894
BstFNI	CGCG	1 cut(s)	1170
BstH2I	RGCGCY	1 cut(s)	1261
BstHHI	GCGC	2 cut(s)	1170, 1260
BstKTI	GATC	9 cut(s)	180, 244, 593, 616, 1031, 1100, 1195, 1252, 1315
BstMBI	GATC	9 cut(s)	177, 241, 590, 613, 1028, 1097, 1192, 1249, 1312
BstMWI	GCNNNNNNNGC	3 cut(s)	263, 935, 1148
BstNSI	RCATGY	3 cut(s)	257, 325, 672
BstSCI	CCNGG	2 cut(s)	368, 369
BstUI	CGCG	1 cut(s)	1170
BstV1I	GCAGC	5 cut(s)	89, 151, 522, 1151, 1193
BstV2I	GAAGAC	3 cut(s)	87, 383, 1204
BstX2I	RGATCY	4 cut(s)	241, 1097, 1249, 1312
BstYI	RGATCY	4 cut(s)	241, 1097, 1249, 1312
BstZ17I	GTATAC	1 cut(s)	452
Bsu15I	ATCGAT	1 cut(s)	906
BsuRI	GGCC	2 cut(s)	66, 368
BsuTUI	ATCGAT	1 cut(s)	906
BtgZI	GCGATG	1 cut(s)	528
BtrI	CACGTC	1 cut(s)	76
BtsCI	GGATG	3 cut(s)	280, 802, 894
BtsIMutI	CAGTG	1 cut(s)	685
Cac8I	GCNNGC	2 cut(s)	1153, 1275
CaiI	CAGNNNCTG	1 cut(s)	1269
CciI	TCATGA	1 cut(s)	54
CfoI	GCGC	2 cut(s)	1170, 1260
Cfr10I	RCCGGY	2 cut(s)	202, 1290
Cfr13I	GGNCC	3 cut(s)	65, 367, 1036
Cfr9I	CCCGGG	1 cut(s)	369
ClaI	ATCGAT	1 cut(s)	906
CseI	GACGC	2 cut(s)	195, 1283
Csp6I	GTAC	2 cut(s)	1048, 1073
CviAII	CATG	9 cut(s)	55, 132, 254, 322, 395, 463, 594, 669, 1324
CviQI	GTAC	2 cut(s)	1048, 1073
DdeI	CTNAG	4 cut(s)	341, 957, 1217, 1254
DpnI	GATC	9 cut(s)	179, 243, 592, 615, 1030, 1099, 1194, 1251, 1314
DpnII	GATC	9 cut(s)	177, 241, 590, 613, 1028, 1097, 1192, 1249, 1312
DraI	TTTAAA	1 cut(s)	270
Eam1104I	CTCTTC	3 cut(s)	426, 438, 1371
EarI	CTCTTC	3 cut(s)	426, 438, 1371
Eco47I	GGWCC	1 cut(s)	1036
Eco47III	AGCGCT	1 cut(s)	1259
Eco57I	CTGAAG	3 cut(s)	354, 419, 1246
Eco88I	CYCGRG	1 cut(s)	369
EcoT22I	ATGCAT	1 cut(s)	1325
FaeI	CATG	9 cut(s)	58, 135, 257, 325, 398, 466, 597, 672, 1327
FaqI	GGGAC	2 cut(s)	1049, 1368
FatI	CATG	9 cut(s)	54, 131, 253, 321, 394, 462, 593, 668, 1323
FblI	GTMKAC	2 cut(s)	41, 451
Fnu4HI	GCNGC	5 cut(s)	103, 165, 511, 1140, 1182
FokI	GGATG	3 cut(s)	287, 809, 901
Fsp4HI	GCNGC	5 cut(s)	103, 165, 511, 1140, 1182
FspBI	CTAG	2 cut(s)	663, 1101
GlaI	GCGC	2 cut(s)	1169, 1259
GluI	GCNGC	5 cut(s)	103, 165, 511, 1140, 1182
GsuI	CTGGAG	1 cut(s)	371
HaeII	RGCGCY	1 cut(s)	1261
HaeIII	GGCC	2 cut(s)	66, 368
HapII	CCGG	3 cut(s)	203, 370, 1291
HgaI	GACGC	2 cut(s)	195, 1283
HhaI	GCGC	2 cut(s)	1170, 1260
Hin1I	GRCGYC	3 cut(s)	44, 206, 1294
Hin1II	CATG	9 cut(s)	58, 135, 257, 325, 398, 466, 597, 672, 1327
Hin6I	GCGC	2 cut(s)	1168, 1258
HinP1I	GCGC	2 cut(s)	1168, 1258
HincII	GTYRAC	2 cut(s)	42, 400
HindII	GTYRAC	2 cut(s)	42, 400
HinfI	GANTC	1 cut(s)	908
HpaII	CCGG	3 cut(s)	203, 370, 1291
HphI	GGTGA	1 cut(s)	871
Hpy166II	GTNNAC	6 cut(s)	6, 42, 400, 452, 488, 575
Hpy188I	TCNGA	7 cut(s)	217, 299, 426, 438, 742, 816, 888
Hpy188III	TCNNGA	8 cut(s)	55, 111, 175, 974, 1190, 1247, 1253, 1301
Hpy8I	GTNNAC	6 cut(s)	6, 42, 400, 452, 488, 575
HpyAV	CCTTC	4 cut(s)	815, 869, 1005, 1088
HpyCH4III	ACNGT	1 cut(s)	646
HpyCH4IV	ACGT	3 cut(s)	44, 75, 530
HpyCH4V	TGCA	7 cut(s)	528, 674, 1058, 1120, 1139, 1323, 1396
HpyF10VI	GCNNNNNNNGC	3 cut(s)	263, 935, 1148
HpyF3I	CTNAG	4 cut(s)	341, 957, 1217, 1254
HpySE526I	ACGT	3 cut(s)	44, 75, 530
Hsp92I	GRCGYC	3 cut(s)	44, 206, 1294
Hsp92II	CATG	9 cut(s)	58, 135, 257, 325, 398, 466, 597, 672, 1327
HspAI	GCGC	2 cut(s)	1168, 1258
KpnI	GGTACC	1 cut(s)	1051
Kzo9I	GATC	9 cut(s)	177, 241, 590, 613, 1028, 1097, 1192, 1249, 1312
LguI	GCTCTTC	2 cut(s)	438, 1371
Lsp1109I	GCAGC	5 cut(s)	89, 151, 522, 1151, 1193
LweI	GCATC	2 cut(s)	768, 1224
MaeI	CTAG	2 cut(s)	663, 1101
MaeII	ACGT	3 cut(s)	44, 75, 530
MaeIII	GTNAC	5 cut(s)	134, 543, 559, 620, 682
MalI	GATC	9 cut(s)	179, 243, 592, 615, 1030, 1099, 1194, 1251, 1314
MboI	GATC	9 cut(s)	177, 241, 590, 613, 1028, 1097, 1192, 1249, 1312
MboII	GAAGA	7 cut(s)	92, 383, 413, 425, 484, 1209, 1388
MflI	RGATCY	4 cut(s)	241, 1097, 1249, 1312
MhlI	GDGCHC	1 cut(s)	229
MmeI	TCCRAC	1 cut(s)	866
MnlI	CCTC	9 cut(s)	4, 305, 429, 712, 852, 855, 858, 937, 1308
Mph1103I	ATGCAT	1 cut(s)	1325
MroXI	GAANNNNTTC	2 cut(s)	304, 969
MseI	TTAA	5 cut(s)	126, 192, 269, 407, 690
MspI	CCGG	3 cut(s)	203, 370, 1291
MspR9I	CCNGG	2 cut(s)	370, 371
MvnI	CGCG	1 cut(s)	1170
MwoI	GCNNNNNNNGC	3 cut(s)	263, 935, 1148
NciI	CCSGG	2 cut(s)	370, 371
NdeII	GATC	9 cut(s)	177, 241, 590, 613, 1028, 1097, 1192, 1249, 1312
NlaIII	CATG	9 cut(s)	58, 135, 257, 325, 398, 466, 597, 672, 1327
NlaIV	GGNNCC	4 cut(s)	243, 922, 1037, 1049
NmuCI	GTSAC	3 cut(s)	134, 559, 682
NsiI	ATGCAT	1 cut(s)	1325
NspI	RCATGY	3 cut(s)	257, 325, 672
PagI	TCATGA	1 cut(s)	54
PciI	ACATGT	2 cut(s)	321, 668
PciSI	GCTCTTC	2 cut(s)	438, 1371
PcsI	WCGNNNNNNNCGW	5 cut(s)	29, 32, 38, 41, 1024
PdmI	GAANNNNTTC	2 cut(s)	304, 969
PfeI	GAWTC	1 cut(s)	908
PkrI	GCNGC	5 cut(s)	104, 166, 512, 1141, 1183
PscI	ACATGT	2 cut(s)	321, 668
PspN4I	GGNNCC	4 cut(s)	243, 922, 1037, 1049
PspPI	GGNCC	3 cut(s)	65, 367, 1036
PstNI	CAGNNNCTG	1 cut(s)	1269
PsuI	RGATCY	4 cut(s)	241, 1097, 1249, 1312
RsaI	GTAC	2 cut(s)	1049, 1074
RsaNI	GTAC	2 cut(s)	1048, 1073
SalI	GTCGAC	1 cut(s)	40
SapI	GCTCTTC	2 cut(s)	438, 1371
SaqAI	TTAA	5 cut(s)	126, 192, 269, 407, 690
SatI	GCNGC	5 cut(s)	103, 165, 511, 1140, 1182
Sau3AI	GATC	9 cut(s)	177, 241, 590, 613, 1028, 1097, 1192, 1249, 1312
Sau96I	GGNCC	3 cut(s)	65, 367, 1036
ScrFI	CCNGG	2 cut(s)	370, 371
SduI	GDGCHC	1 cut(s)	229
SfaNI	GCATC	2 cut(s)	768, 1224
SgrDI	CGTCGACG	1 cut(s)	40
SinI	GGWCC	1 cut(s)	1036
SmaI	CCCGGG	1 cut(s)	371
SmlI	CTYRAG	2 cut(s)	109, 1205
SmoI	CTYRAG	2 cut(s)	109, 1205
SsiI	CCGC	2 cut(s)	968, 1170
SspMI	CTAG	2 cut(s)	663, 1101
StyD4I	CCNGG	2 cut(s)	368, 369
TaaI	ACNGT	1 cut(s)	646
TaiI	ACGT	3 cut(s)	47, 78, 533
TaqI	TCGA	7 cut(s)	41, 589, 844, 906, 1027, 1189, 1195
TaqII	GACCGA	1 cut(s)	74
TfiI	GAWTC	1 cut(s)	908
Tru1I	TTAA	5 cut(s)	126, 192, 269, 407, 690
Tru9I	TTAA	5 cut(s)	126, 192, 269, 407, 690
TscAI	CASTG	1 cut(s)	685
TseFI	GTSAC	3 cut(s)	134, 559, 682
TseI	GCWGC	5 cut(s)	102, 164, 510, 1139, 1181
Tsp45I	GTSAC	3 cut(s)	134, 559, 682
TspDTI	ATGAA	5 cut(s)	43, 375, 383, 567, 643
TspGWI	ACGGA	2 cut(s)	244, 1127
TspMI	CCCGGG	1 cut(s)	369
TspRI	CASTG	1 cut(s)	685
VpaK11BI	GGWCC	1 cut(s)	1036
XapI	RAATTY	3 cut(s)	185, 439, 722
XceI	RCATGY	3 cut(s)	257, 325, 672
XmaI	CCCGGG	1 cut(s)	369
XmiI	GTMKAC	2 cut(s)	41, 451
XmnI	GAANNNNTTC	2 cut(s)	304, 969
XspI	CTAG	2 cut(s)	663, 1101
ZraI	GACGTC	1 cut(s)	45
Zsp2I	ATGCAT	1 cut(s)	1325

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.