Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00964

Orthogroup ID

OG0009065

Physical Location & Seq

Genomic Coordinates Forward (+)

2803 .. 7998

Gene Structure 5196 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G021030.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1488 bp

ATGTCCACCGAGGCAGAGCCGTCGTCGTCGTCGTCGTCGTCGACGTCGGGGTTCATGACCGACGGCCCTGATGACGTGGAAGACTACATTTCGGCTAATGAAGGAGAACCGGCATTGCCCTGGGACATATTTAGTCATGTTTTTGATCTTGTGCAGAAGGGAAACCAGGCTTTTCGAGAGAACCGATTTGAGGAGGCAATTAGCTGCTACTCAAGAGCCAATTACATTAAACCATGTGACCCTGTTATTCTTGGCAACCGAACTGCTGCTTATATCAGGATCAGTAAATTCCTTAAACGCATACCGGCGTCGGCTTCTGAATATAGAGCACGGACTGGATTGGATCCTACAATACATGCTGAACTTGCTTTAAAGGATGTGGAGAAGCTAATCAACCTCCGAAGTAATTCAGCAAAACCATACATGTTGAAAGCTGAAGCTCTAAGTTTGCTGGAGAAATATGAAATGGCCCGGGATATTATCTTATGTGGTCTTCATGTTGACCCTTTAAGTAGCAATCCTCTTCGGACAGCTCTTCAGAATTTGGAGAGTATACAAGTTAGCATGACAGGGAAGATAAGCCATAGTAAACCAGAACGAAAAGCAGAACGCAGCGATGATTTTGATTGCACGTTATGTTTCAAGTTACTCTATGAACCTGTGACAACGCCTTGTGGACATTCCTTTTGTCGATCATGCTTGTTTCAGTCAATGGATCAAGGTAACAAATGTCCATTATGCCGAAGTCCTAGAACATGTGCAATCAGTGTGACACTTAACGACATTATACAAAAGAACTTCCCAGAGGAATTTGCTGAAAGGAAGTCAGAGAATGATACAATGACAAACTTTGGTGCTGATTTGATGCCACTCTTTGTAATGGATGTTGTCCTTCCTTTTCAGAAGTTTCCACTACACATTTTTGAGCCTCGATATAGACTTATGGTGAGGAGGATAATGGAAGGCAACCGTCGGATGGGAATGGTCATCATCGATTCTACAACAGGTTCCATAGCTGATTTTGCTTGTGAGGTGGAAATTACTGAGTGCGAACCGCTTCCAGATGGGCGTTTCTATTTAGAGATTGAAAGTCGCCGAAGGTTTCGCATAATTCGATCTTGGGACCAAGATGGGTACCGAGTTGCAGAGATTGAATGGGTACAGGATATATGCCCACCAGAAGGATCTAGTGAGAGAACAGAATTGCAGGAATTGACGAATAATGCAGCAGAATATGCTCGCTTATGGATAGGGCGCGGTAAAAGAGCAGCAAGTCGAGATCGAAGACGACTTGAGAAACTTCTCAGCGTAGAAGCAATGATGCCATCAGTTCAAGATCCTGAGCGCTTCAGCTTCTGGCTGGCTTCCCTTTCAAACCGACGTCCTCACGAAAGATTGGATCTCTTATGCATGAGAGATACAAAAGAGAGAATACAACGGGGACTAATATATCTCAAAGCAGAAGAGCAAGGTTGTCAAGTGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009705 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010959 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019725 GO:0021700 GO:0022622 GO:0030154 GO:0031090 GO:0032501 GO:0032502 GO:0032879 GO:0036211 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0051049 GO:0051924 GO:0055082 GO:0065007 GO:0065008 GO:0071695 GO:0071704 GO:0080147 GO:0090558 GO:0090627 GO:0097272 GO:0097275 GO:0098588 GO:0098805 GO:0099402 GO:0140096 GO:1901564 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LON_substr_bdg Malectin_like Pkinase_Tyr zf-C3HC4_2

Protein Analysis

495

Amino Acids

56.66

Weight (kDa)

5.75

Isoelectric Point (pI)

53.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-C3HC4_3	PF13920	208 - 250	1.7e-07	Zinc finger, C3HC4 type (RING finger)
zf-RING_2	PF13639	209 - 248	3.7e-08	Ring finger domain
zf-C3HC4_2	PF13923	210 - 247	4.7e-13	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	210 - 247	1e-09	Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX	PF13445	210 - 245	5.2e-07	RING-type zinc-finger
zf-RING_5	PF14634	210 - 248	1.4e-06	zinc-RING finger domain
zf-C3HC4_4	PF15227	210 - 247	1.9e-06	zinc finger of C3HC4-type, RING
LON_substr_bdg	PF02190	289 - 486	4.7e-28	ATP-dependent protease La (LON) substrate-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009065)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18660 AT1G18660 AT1G18660 AT1G18660
fragaria_vesca	FvH4_5g14510 FvH4_5g14510 FvH4_5g14510
malus_domestica	MD06G1197800.v1.1 MD14G1205300.v1.1
prunus_persica	Prupe.5G198700_v2.0.a1 Prupe.5G198700_v2.0.a1
pyrus_communis	pycom06g17480 pycom14g16990
rosa_chinensis	RchiOBHm_Chr7g0182141
rosa_laevigata	RLG00000005147
rosa_multiflora	Rmu_co8332863.1_g000001
rosa_roxburghii	Rroxscaffold_3G00271470
rosa_samantha	Rh7AG048700 Rh7BG048600 Rh7CG050000 Rh7DG047900
rosa_wichuraiana	Rw0G021030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	47, 1384
Acc65I	GGTACC	1 cut(s)	1134
AccB1I	GGYRCC	1 cut(s)	1134
AccI	GTMKAC	2 cut(s)	41, 553
AccII	CGCG	1 cut(s)	1257
AciI	CCGC	2 cut(s)	1055, 1257
AclWI	GGATC	7 cut(s)	287, 338, 351, 723, 1192, 1331, 1407
AcsI	RAATTY	3 cut(s)	287, 541, 809
AcuI	CTGAAG	3 cut(s)	456, 521, 1333
AcyI	GRCGYC	3 cut(s)	44, 308, 1381
AfaI	GTAC	2 cut(s)	1136, 1161
AfeI	AGCGCT	1 cut(s)	1346
AfiI	CCNNNNNNNGG	3 cut(s)	190, 976, 1181
AflIII	ACRYGT	2 cut(s)	423, 755
AgsI	TTSAA	6 cut(s)	430, 643, 1088, 1154, 1334, 1374
AjiI	CACGTC	1 cut(s)	76
AjnI	CCWGG	2 cut(s)	119, 165
AluBI	AGCT	7 cut(s)	204, 388, 434, 440, 533, 1016, 1353
AluI	AGCT	7 cut(s)	204, 388, 434, 440, 533, 1016, 1353
Alw21I	GWGCWC	1 cut(s)	331
AlwI	GGATC	7 cut(s)	287, 338, 351, 723, 1192, 1331, 1407
AlwNI	CAGNNNCTG	1 cut(s)	1356
Ama87I	CYCGRG	1 cut(s)	471
Aor51HI	AGCGCT	1 cut(s)	1346
AoxI	GGCC	2 cut(s)	64, 468
ApeKI	GCWGC	5 cut(s)	204, 266, 612, 1226, 1268
ApoI	RAATTY	3 cut(s)	287, 541, 809
ArsI	GACNNNNNNTTYG	2 cut(s)	669, 701
Asp700I	GAANNNNTTC	2 cut(s)	406, 1056
Asp718I	GGTACC	1 cut(s)	1134
AspLEI	GCGC	2 cut(s)	1257, 1347
AspS9I	GGNCC	3 cut(s)	65, 469, 1123
AsuC2I	CCSGG	2 cut(s)	472, 473
AsuHPI	GGTGA	1 cut(s)	958
AvaI	CYCGRG	1 cut(s)	471
AvaII	GGWCC	1 cut(s)	1123
BamHI	GGATCC	1 cut(s)	343
BanI	GGYRCC	1 cut(s)	1134
BbsI	GAAGAC	3 cut(s)	87, 485, 1291
Bbv12I	GWGCWC	1 cut(s)	331
BbvI	GCAGC	5 cut(s)	191, 253, 624, 1238, 1280
BccI	CCATC	4 cut(s)	970, 1058, 1124, 1333
BceAI	ACGGC	2 cut(s)	4, 79
BcgI	CGANNNNNNTGC	1 cut(s)	37
BciT130I	CCWGG	2 cut(s)	121, 167
BcnI	CCSGG	2 cut(s)	472, 473
BfaI	CTAG	2 cut(s)	750, 1188
BfoI	RGCGCY	1 cut(s)	1348
BisI	GCNGC	5 cut(s)	205, 267, 613, 1227, 1269
BlsI	GCNGC	5 cut(s)	206, 268, 614, 1228, 1270
Bme1390I	CCNGG	4 cut(s)	121, 167, 472, 473
Bme18I	GGWCC	1 cut(s)	1123
BmeT110I	CYCGRG	1 cut(s)	471
BmgBI	CACGTC	1 cut(s)	76
BmgT120I	GGNCC	3 cut(s)	65, 469, 1123
BmiI	GGNNCC	4 cut(s)	345, 1009, 1124, 1136
BmrFI	CCNGG	4 cut(s)	121, 167, 472, 473
BmsI	GCATC	2 cut(s)	855, 1311
BpiI	GAAGAC	3 cut(s)	87, 485, 1291
BpmI	CTGGAG	1 cut(s)	473
Bpu10I	CCTNAGC	1 cut(s)	1341
BpuEI	CTTGAG	2 cut(s)	196, 1313
BpuMI	CCSGG	2 cut(s)	472, 473
Bsa29I	ATCGAT	1 cut(s)	993
BsaHI	GRCGYC	3 cut(s)	44, 308, 1381
BsaJI	CCNNGG	4 cut(s)	9, 119, 120, 471
Bsc4I	CCNNNNNNNGG	3 cut(s)	190, 976, 1181
Bse118I	RCCGGY	2 cut(s)	109, 304
Bse1I	ACTGG	1 cut(s)	340
Bse3DI	GCAATG	2 cut(s)	113, 1323
BseBI	CCWGG	2 cut(s)	121, 167
BseCI	ATCGAT	1 cut(s)	993
BseDI	CCNNGG	4 cut(s)	9, 119, 120, 471
BseGI	GGATG	3 cut(s)	382, 889, 981
BseLI	CCNNNNNNNGG	3 cut(s)	190, 976, 1181
BseMI	GCAATG	2 cut(s)	113, 1323
BseMII	CTCAG	3 cut(s)	1035, 1318, 1332
BseNI	ACTGG	1 cut(s)	340
BseRI	GAGGAG	2 cut(s)	206, 964
BseXI	GCAGC	5 cut(s)	191, 253, 624, 1238, 1280
BsgI	GTGCAG	1 cut(s)	173
Bsh1236I	CGCG	1 cut(s)	1257
BshFI	GGCC	2 cut(s)	66, 470
BshNI	GGYRCC	1 cut(s)	1134
BshVI	ATCGAT	1 cut(s)	993
BsiHKAI	GWGCWC	1 cut(s)	331
BsiHKCI	CYCGRG	1 cut(s)	471
BsiSI	CCGG	3 cut(s)	110, 305, 472
BslFI	GGGAC	3 cut(s)	137, 1136, 1455
BslI	CCNNNNNNNGG	3 cut(s)	190, 976, 1181
BsmFI	GGGAC	3 cut(s)	137, 1136, 1455
BsnI	GGCC	2 cut(s)	66, 470
BsoBI	CYCGRG	1 cut(s)	471
Bsp1286I	GDGCHC	1 cut(s)	331
BspACI	CCGC	2 cut(s)	1055, 1257
BspANI	GGCC	2 cut(s)	66, 470
BspCNI	CTCAG	3 cut(s)	1036, 1317, 1333
BspDI	ATCGAT	1 cut(s)	993
BspFNI	CGCG	1 cut(s)	1257
BspHI	TCATGA	1 cut(s)	54
BspLI	GGNNCC	4 cut(s)	345, 1009, 1124, 1136
BspPI	GGATC	7 cut(s)	287, 338, 351, 723, 1192, 1331, 1407
BspQI	GCTCTTC	2 cut(s)	540, 1458
BspT107I	GGYRCC	1 cut(s)	1134
BsrDI	GCAATG	2 cut(s)	113, 1323
BsrFI	RCCGGY	2 cut(s)	109, 304
BsrI	ACTGG	1 cut(s)	340
BssAI	RCCGGY	2 cut(s)	109, 304
BssECI	CCNNGG	4 cut(s)	9, 119, 120, 471
BssNAI	GTATAC	1 cut(s)	554
BssNI	GRCGYC	3 cut(s)	44, 308, 1381
Bst1107I	GTATAC	1 cut(s)	554
Bst2UI	CCWGG	2 cut(s)	121, 167
Bst4CI	ACNGT	1 cut(s)	971
Bst6I	CTCTTC	3 cut(s)	528, 540, 1458
BstACI	GRCGYC	3 cut(s)	44, 308, 1381
BstAPI	GCANNNNNTGC	1 cut(s)	1235
BstC8I	GCNNGC	2 cut(s)	1240, 1362
BstDEI	CTNAG	4 cut(s)	443, 1044, 1304, 1341
BstF5I	GGATG	3 cut(s)	382, 889, 981
BstFNI	CGCG	1 cut(s)	1257
BstH2I	RGCGCY	1 cut(s)	1348
BstHHI	GCGC	2 cut(s)	1257, 1347
BstMWI	GCNNNNNNNGC	3 cut(s)	365, 1022, 1235
BstNI	CCWGG	2 cut(s)	121, 167
BstNSI	RCATGY	3 cut(s)	359, 427, 759
BstSCI	CCNGG	4 cut(s)	119, 165, 470, 471
BstUI	CGCG	1 cut(s)	1257
BstV1I	GCAGC	5 cut(s)	191, 253, 624, 1238, 1280
BstV2I	GAAGAC	3 cut(s)	87, 485, 1291
BstX2I	RGATCY	4 cut(s)	343, 1184, 1336, 1399
BstYI	RGATCY	4 cut(s)	343, 1184, 1336, 1399
BstZ17I	GTATAC	1 cut(s)	554
Bsu15I	ATCGAT	1 cut(s)	993
BsuRI	GGCC	2 cut(s)	66, 470
BsuTUI	ATCGAT	1 cut(s)	993
BtgZI	GCGATG	1 cut(s)	630
BtrI	CACGTC	1 cut(s)	76
BtsCI	GGATG	3 cut(s)	382, 889, 981
BtsIMutI	CAGTG	1 cut(s)	772
Cac8I	GCNNGC	2 cut(s)	1240, 1362
CaiI	CAGNNNCTG	1 cut(s)	1356
CciI	TCATGA	1 cut(s)	54
CfoI	GCGC	2 cut(s)	1257, 1347
Cfr10I	RCCGGY	2 cut(s)	109, 304
Cfr13I	GGNCC	3 cut(s)	65, 469, 1123
Cfr9I	CCCGGG	1 cut(s)	471
ClaI	ATCGAT	1 cut(s)	993
CseI	GACGC	1 cut(s)	297
Csp6I	GTAC	2 cut(s)	1135, 1160
CviQI	GTAC	2 cut(s)	1135, 1160
DdeI	CTNAG	4 cut(s)	443, 1044, 1304, 1341
DraI	TTTAAA	1 cut(s)	372
Eam1104I	CTCTTC	3 cut(s)	528, 540, 1458
EarI	CTCTTC	3 cut(s)	528, 540, 1458
Eco47I	GGWCC	1 cut(s)	1123
Eco47III	AGCGCT	1 cut(s)	1346
Eco57I	CTGAAG	3 cut(s)	456, 521, 1333
Eco88I	CYCGRG	1 cut(s)	471
EcoRII	CCWGG	2 cut(s)	119, 165
EcoT22I	ATGCAT	1 cut(s)	1412
FaqI	GGGAC	3 cut(s)	137, 1136, 1455
FblI	GTMKAC	2 cut(s)	41, 553
Fnu4HI	GCNGC	5 cut(s)	205, 267, 613, 1227, 1269
FokI	GGATG	3 cut(s)	389, 896, 988
Fsp4HI	GCNGC	5 cut(s)	205, 267, 613, 1227, 1269
FspBI	CTAG	2 cut(s)	750, 1188
GlaI	GCGC	2 cut(s)	1256, 1346
GluI	GCNGC	5 cut(s)	205, 267, 613, 1227, 1269
GsuI	CTGGAG	1 cut(s)	473
HaeII	RGCGCY	1 cut(s)	1348
HaeIII	GGCC	2 cut(s)	66, 470
HapII	CCGG	3 cut(s)	110, 305, 472
HgaI	GACGC	1 cut(s)	297
HhaI	GCGC	2 cut(s)	1257, 1347
Hin1I	GRCGYC	3 cut(s)	44, 308, 1381
Hin6I	GCGC	2 cut(s)	1255, 1345
HinP1I	GCGC	2 cut(s)	1255, 1345
HincII	GTYRAC	2 cut(s)	42, 502
HindII	GTYRAC	2 cut(s)	42, 502
HinfI	GANTC	1 cut(s)	995
HpaII	CCGG	3 cut(s)	110, 305, 472
HphI	GGTGA	1 cut(s)	958
Hpy166II	GTNNAC	6 cut(s)	6, 42, 502, 554, 590, 677
Hpy188I	TCNGA	7 cut(s)	319, 401, 528, 540, 829, 903, 975
Hpy188III	TCNNGA	9 cut(s)	55, 176, 213, 277, 1061, 1277, 1334, 1340, 1388
Hpy8I	GTNNAC	6 cut(s)	6, 42, 502, 554, 590, 677
HpyAV	CCTTC	6 cut(s)	95, 151, 902, 956, 1092, 1175
HpyCH4III	ACNGT	1 cut(s)	971
HpyCH4IV	ACGT	4 cut(s)	44, 75, 632, 1381
HpyCH4V	TGCA	8 cut(s)	154, 630, 761, 1145, 1207, 1226, 1410, 1483
HpyF10VI	GCNNNNNNNGC	3 cut(s)	365, 1022, 1235
HpyF3I	CTNAG	4 cut(s)	443, 1044, 1304, 1341
HpySE526I	ACGT	4 cut(s)	44, 75, 632, 1381
Hsp92I	GRCGYC	3 cut(s)	44, 308, 1381
HspAI	GCGC	2 cut(s)	1255, 1345
KpnI	GGTACC	1 cut(s)	1138
LguI	GCTCTTC	2 cut(s)	540, 1458
Lsp1109I	GCAGC	5 cut(s)	191, 253, 624, 1238, 1280
LweI	GCATC	2 cut(s)	855, 1311
MaeI	CTAG	2 cut(s)	750, 1188
MaeII	ACGT	4 cut(s)	44, 75, 632, 1381
MaeIII	GTNAC	5 cut(s)	236, 645, 661, 722, 769
MboII	GAAGA	7 cut(s)	92, 485, 515, 527, 586, 1296, 1475
MflI	RGATCY	4 cut(s)	343, 1184, 1336, 1399
MhlI	GDGCHC	1 cut(s)	331
MmeI	TCCRAC	1 cut(s)	953
Mph1103I	ATGCAT	1 cut(s)	1412
MroXI	GAANNNNTTC	2 cut(s)	406, 1056
MseI	TTAA	5 cut(s)	228, 294, 371, 509, 777
MspI	CCGG	3 cut(s)	110, 305, 472
MspR9I	CCNGG	4 cut(s)	121, 167, 472, 473
MvaI	CCWGG	2 cut(s)	121, 167
MvnI	CGCG	1 cut(s)	1257
MwoI	GCNNNNNNNGC	3 cut(s)	365, 1022, 1235
NciI	CCSGG	2 cut(s)	472, 473
NlaIV	GGNNCC	4 cut(s)	345, 1009, 1124, 1136
NmuCI	GTSAC	3 cut(s)	236, 661, 769
NsiI	ATGCAT	1 cut(s)	1412
NspI	RCATGY	3 cut(s)	359, 427, 759
PagI	TCATGA	1 cut(s)	54
PasI	CCCWGGG	1 cut(s)	120
PciI	ACATGT	2 cut(s)	423, 755
PciSI	GCTCTTC	2 cut(s)	540, 1458
PcsI	WCGNNNNNNNCGW	7 cut(s)	29, 32, 35, 38, 41, 181, 1111
PdmI	GAANNNNTTC	2 cut(s)	406, 1056
PfeI	GAWTC	1 cut(s)	995
PkrI	GCNGC	5 cut(s)	206, 268, 614, 1228, 1270
PscI	ACATGT	2 cut(s)	423, 755
Psp6I	CCWGG	2 cut(s)	119, 165
PspGI	CCWGG	2 cut(s)	119, 165
PspN4I	GGNNCC	4 cut(s)	345, 1009, 1124, 1136
PspPI	GGNCC	3 cut(s)	65, 469, 1123
PstNI	CAGNNNCTG	1 cut(s)	1356
PsuI	RGATCY	4 cut(s)	343, 1184, 1336, 1399
RsaI	GTAC	2 cut(s)	1136, 1161
RsaNI	GTAC	2 cut(s)	1135, 1160
SalI	GTCGAC	1 cut(s)	40
SapI	GCTCTTC	2 cut(s)	540, 1458
SaqAI	TTAA	5 cut(s)	228, 294, 371, 509, 777
SatI	GCNGC	5 cut(s)	205, 267, 613, 1227, 1269
Sau96I	GGNCC	3 cut(s)	65, 469, 1123
ScrFI	CCNGG	4 cut(s)	121, 167, 472, 473
SduI	GDGCHC	1 cut(s)	331
SfaNI	GCATC	2 cut(s)	855, 1311
SgrDI	CGTCGACG	1 cut(s)	40
SinI	GGWCC	1 cut(s)	1123
SmaI	CCCGGG	1 cut(s)	473
SmlI	CTYRAG	2 cut(s)	211, 1292
SmoI	CTYRAG	2 cut(s)	211, 1292
SsiI	CCGC	2 cut(s)	1055, 1257
SspMI	CTAG	2 cut(s)	750, 1188
StyD4I	CCNGG	4 cut(s)	119, 165, 470, 471
TaaI	ACNGT	1 cut(s)	971
TaiI	ACGT	4 cut(s)	47, 78, 635, 1384
TaqI	TCGA	8 cut(s)	41, 175, 691, 931, 993, 1114, 1276, 1282
TaqII	GACCGA	1 cut(s)	74
TfiI	GAWTC	1 cut(s)	995
Tru1I	TTAA	5 cut(s)	228, 294, 371, 509, 777
Tru9I	TTAA	5 cut(s)	228, 294, 371, 509, 777
TscAI	CASTG	1 cut(s)	772
TseFI	GTSAC	3 cut(s)	236, 661, 769
TseI	GCWGC	5 cut(s)	204, 266, 612, 1226, 1268
Tsp45I	GTSAC	3 cut(s)	236, 661, 769
TspDTI	ATGAA	5 cut(s)	43, 114, 477, 485, 669
TspGWI	ACGGA	1 cut(s)	346
TspMI	CCCGGG	1 cut(s)	471
TspRI	CASTG	1 cut(s)	772
VpaK11BI	GGWCC	1 cut(s)	1123
XapI	RAATTY	3 cut(s)	287, 541, 809
XceI	RCATGY	3 cut(s)	359, 427, 759
XmaI	CCCGGG	1 cut(s)	471
XmiI	GTMKAC	2 cut(s)	41, 553
XmnI	GAANNNNTTC	2 cut(s)	406, 1056
XspI	CTAG	2 cut(s)	750, 1188
ZraI	GACGTC	2 cut(s)	45, 1382
Zsp2I	ATGCAT	1 cut(s)	1412

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.