Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0009065

Physical Location & Seq

Genomic Coordinates Forward (+)

65380347 .. 65385543

Gene Structure 5197 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005147

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1497 bp

ATGTCCACCGAGGCAGAGCCGTCGTCGTCGTCGTCGTCGACGTCGGGGTTCATGACCGACGGCCCTGATGACGTGGAAGACTACATTTCGGCTAATGAAGGAGAAGCGGCACTGCCCTGGGACATATTTAGTCATGTTTTTGATCTTGTGCAGAAGGGAAACCAGGCTTTTCGAGAGAATCGATTTGAGGAGGCAATTAATTGCTACACAAGAGCCAATAACATTAAACCATGTGACCCTGTTATTCTTGGCAACCGAACTGCTGCTTATATCAGGATCAGTAAATTCCTTAAACTCATACCGGCATCGGCTTCTGAATATAGAGCACGGAACGGATTGGATCCTACAATACATGCTGAACTTGCTTTAAAGGATGTGGAGAAGCTAATCAACCTCCGAAGTAATTCAGCAAAACCATACATGTTGAAAGCTCAAGCTCTAAGTTTGCTGGAGAAATATGAAATGGCCCGGGATATTATCTTATGTGGTCTTCATGTTGACCCTTTAAGCAATCCTCTTCGGACAGCTCTTCAGAATTTGGAGAGTATACAAGTTAGCATGACAGGGAAGAGAAGCCATAGCAAACCAGAACGAAAAGCAGAACGCAGCGATGATTTTGATTGCACGTTATGTCTCAAGTTACTCTATGAACCTGTGACAACACCTTGTGGACATTCCTTTTGTCGATCATGCTTATTTCAGTCAATGGATCGAGGTAACAAATGTCCATTATGCCGAACCGTTCTGTTCATTAGTCCTAGAACGTGTGCAATCAGTGTGACACTTAACGACATTATACAAAAGAACTTCCCAGAGGAATTTGCTGAAAGGAAGTCAGAGAATGACACAATGACAAACTTTGGTGCTGATTTGATGCCACTTTTTGTAATGGATGTTGTCCTTCCTTTTCAGAAGTTTCCACTACACATTTTTGAGCCTCGATATAGACTTATGGTGAGGAGGATAATGGAAGGCAACCGTCGGATGGGAATGGTCATCATCGATTCTACAACAGGTTCCATTGCTGATTCTGCTTGTGAGGTGGAAATTACTGAGTGCGAACCGCTTCCAGATGGGCGTTTCTATTTAGAGATTGAAAGTCGCCGAAGGTTTCACATAATTCGATCTTGGGACCAAGATGGGTACCGAGTTGCAGAGATTGAATGGGTACAGGATATATGCCCACCAGAAGGATCTAGAGAGAGAACAGAATTGCAGGAATTGACGAATAATGCAGCAGATTATGCTCGCTTATGGATAGGGCGCGGTAAAAGAGCAGCAAGTCGAGATCGAAGACGACTTGAGAAACTTCTCAGTGTAGAAGCAATGATGCCATCAGTTCAAGATCCTGAGCGCTTCAGCTTCTGGCTGGCTTCCCTTTCAAACCGACGTCCTCACGAAAGATTGGATCTCTTACGCATGAGAGATACAAAAGAGAGAATACAACGGGGACTAATATATCTCAGAGCAGAAGAGCAAGGTTGTCAAGTGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009705 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010959 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019725 GO:0021700 GO:0022622 GO:0030154 GO:0031090 GO:0032501 GO:0032502 GO:0032879 GO:0036211 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0051049 GO:0051924 GO:0055082 GO:0065007 GO:0065008 GO:0071695 GO:0071704 GO:0080147 GO:0090558 GO:0090627 GO:0097272 GO:0097275 GO:0098588 GO:0098805 GO:0099402 GO:0140096 GO:1901564 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LON_substr_bdg Malectin_like Pkinase_Tyr zf-C3HC4_2

Protein Analysis

499

Amino Acids

57.09

Weight (kDa)

6.17

Isoelectric Point (pI)

53.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-C3HC4_3	PF13920	206 - 247	8.6e-08	Zinc finger, C3HC4 type (RING finger)
zf-RING_2	PF13639	207 - 246	2e-08	Ring finger domain
zf-C3HC4_2	PF13923	208 - 245	1.2e-12	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	208 - 245	4.6e-10	Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX	PF13445	208 - 243	4.7e-07	RING-type zinc-finger
zf-C3HC4_4	PF15227	208 - 245	5.4e-07	zinc finger of C3HC4-type, RING
zf-RING_5	PF14634	208 - 247	6e-06	zinc-RING finger domain
LON_substr_bdg	PF02190	292 - 488	3.3e-26	ATP-dependent protease La (LON) substrate-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009065)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18660 AT1G18660 AT1G18660 AT1G18660
fragaria_vesca	FvH4_5g14510 FvH4_5g14510 FvH4_5g14510
malus_domestica	MD06G1197800.v1.1 MD14G1205300.v1.1
prunus_persica	Prupe.5G198700_v2.0.a1 Prupe.5G198700_v2.0.a1
pyrus_communis	pycom06g17480 pycom14g16990
rosa_chinensis	RchiOBHm_Chr7g0182141
rosa_laevigata	RLG00000005147
rosa_multiflora	Rmu_co8332863.1_g000001
rosa_roxburghii	Rroxscaffold_3G00271470
rosa_samantha	Rh7AG048700 Rh7BG048600 Rh7CG050000 Rh7DG047900
rosa_wichuraiana	Rw0G021030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	44, 1393
Acc65I	GGTACC	1 cut(s)	1143
AccB1I	GGYRCC	1 cut(s)	1143
AccI	GTMKAC	2 cut(s)	38, 547
AccII	CGCG	1 cut(s)	1266
AciI	CCGC	3 cut(s)	107, 1064, 1266
AclWI	GGATC	7 cut(s)	284, 335, 348, 717, 1201, 1340, 1416
AcsI	RAATTY	3 cut(s)	284, 535, 818
AcuI	CTGAAG	2 cut(s)	515, 1342
AcyI	GRCGYC	2 cut(s)	41, 1390
AdeI	CACNNNGTG	1 cut(s)	668
AfaI	GTAC	2 cut(s)	1145, 1170
AfeI	AGCGCT	1 cut(s)	1355
AfiI	CCNNNNNNNGG	2 cut(s)	985, 1190
AflIII	ACRYGT	2 cut(s)	420, 764
AgsI	TTSAA	5 cut(s)	427, 1097, 1163, 1343, 1383
AjiI	CACGTC	1 cut(s)	73
AjnI	CCWGG	2 cut(s)	116, 162
AluBI	AGCT	5 cut(s)	385, 431, 437, 527, 1362
AluI	AGCT	5 cut(s)	385, 431, 437, 527, 1362
Alw21I	GWGCWC	1 cut(s)	328
Alw26I	GTCTC	1 cut(s)	638
AlwI	GGATC	7 cut(s)	284, 335, 348, 717, 1201, 1340, 1416
AlwNI	CAGNNNCTG	1 cut(s)	1365
Ama87I	CYCGRG	1 cut(s)	468
Aor51HI	AGCGCT	1 cut(s)	1355
AoxI	GGCC	2 cut(s)	61, 465
ApeKI	GCWGC	4 cut(s)	263, 606, 1235, 1277
ApoI	RAATTY	3 cut(s)	284, 535, 818
ArsI	GACNNNNNNTTYG	2 cut(s)	663, 695
AseI	ATTAAT	1 cut(s)	198
Asp700I	GAANNNNTTC	2 cut(s)	403, 1065
Asp718I	GGTACC	1 cut(s)	1143
AspLEI	GCGC	2 cut(s)	1266, 1356
AspS9I	GGNCC	3 cut(s)	62, 466, 1132
AsuC2I	CCSGG	2 cut(s)	469, 470
AsuHPI	GGTGA	1 cut(s)	967
AvaI	CYCGRG	1 cut(s)	468
AvaII	GGWCC	1 cut(s)	1132
BamHI	GGATCC	1 cut(s)	340
BanI	GGYRCC	1 cut(s)	1143
BbsI	GAAGAC	3 cut(s)	84, 482, 1300
Bbv12I	GWGCWC	1 cut(s)	328
BbvI	GCAGC	4 cut(s)	250, 618, 1247, 1289
BccI	CCATC	4 cut(s)	979, 1067, 1133, 1342
BceAI	ACGGC	2 cut(s)	4, 76
BcgI	CGANNNNNNTGC	1 cut(s)	37
BciT130I	CCWGG	2 cut(s)	118, 164
BcnI	CCSGG	2 cut(s)	469, 470
BcoDI	GTCTC	1 cut(s)	638
BfaI	CTAG	2 cut(s)	759, 1197
BfoI	RGCGCY	1 cut(s)	1357
BisI	GCNGC	5 cut(s)	108, 264, 607, 1236, 1278
BlsI	GCNGC	5 cut(s)	109, 265, 608, 1237, 1279
Bme1390I	CCNGG	4 cut(s)	118, 164, 469, 470
Bme18I	GGWCC	1 cut(s)	1132
BmeT110I	CYCGRG	1 cut(s)	468
BmgBI	CACGTC	1 cut(s)	73
BmgT120I	GGNCC	3 cut(s)	62, 466, 1132
BmiI	GGNNCC	4 cut(s)	342, 1018, 1133, 1145
BmrFI	CCNGG	4 cut(s)	118, 164, 469, 470
BmsI	GCATC	3 cut(s)	314, 864, 1320
BpiI	GAAGAC	3 cut(s)	84, 482, 1300
BpmI	CTGGAG	1 cut(s)	470
Bpu10I	CCTNAGC	1 cut(s)	1350
BpuEI	CTTGAG	3 cut(s)	417, 620, 1322
BpuMI	CCSGG	2 cut(s)	469, 470
Bsa29I	ATCGAT	2 cut(s)	181, 1002
BsaHI	GRCGYC	2 cut(s)	41, 1390
BsaJI	CCNNGG	4 cut(s)	9, 116, 117, 468
Bsc4I	CCNNNNNNNGG	2 cut(s)	985, 1190
Bse118I	RCCGGY	1 cut(s)	301
Bse3DI	GCAATG	2 cut(s)	1020, 1332
BseBI	CCWGG	2 cut(s)	118, 164
BseCI	ATCGAT	2 cut(s)	181, 1002
BseDI	CCNNGG	4 cut(s)	9, 116, 117, 468
BseGI	GGATG	3 cut(s)	379, 898, 990
BseLI	CCNNNNNNNGG	2 cut(s)	985, 1190
BseMI	GCAATG	2 cut(s)	1020, 1332
BseMII	CTCAG	4 cut(s)	1044, 1327, 1341, 1477
BseRI	GAGGAG	2 cut(s)	203, 973
BseXI	GCAGC	4 cut(s)	250, 618, 1247, 1289
BsgI	GTGCAG	1 cut(s)	170
Bsh1236I	CGCG	1 cut(s)	1266
BshFI	GGCC	2 cut(s)	63, 467
BshNI	GGYRCC	1 cut(s)	1143
BshVI	ATCGAT	2 cut(s)	181, 1002
BsiHKAI	GWGCWC	1 cut(s)	328
BsiHKCI	CYCGRG	1 cut(s)	468
BsiSI	CCGG	2 cut(s)	302, 469
BslFI	GGGAC	3 cut(s)	134, 1145, 1464
BslI	CCNNNNNNNGG	2 cut(s)	985, 1190
BsmAI	GTCTC	1 cut(s)	638
BsmFI	GGGAC	3 cut(s)	134, 1145, 1464
BsnI	GGCC	2 cut(s)	63, 467
BsoBI	CYCGRG	1 cut(s)	468
Bsp1286I	GDGCHC	1 cut(s)	328
BspACI	CCGC	3 cut(s)	107, 1064, 1266
BspANI	GGCC	2 cut(s)	63, 467
BspCNI	CTCAG	4 cut(s)	1045, 1326, 1342, 1476
BspDI	ATCGAT	2 cut(s)	181, 1002
BspFNI	CGCG	1 cut(s)	1266
BspHI	TCATGA	1 cut(s)	51
BspLI	GGNNCC	4 cut(s)	342, 1018, 1133, 1145
BspPI	GGATC	7 cut(s)	284, 335, 348, 717, 1201, 1340, 1416
BspQI	GCTCTTC	2 cut(s)	534, 1467
BspT107I	GGYRCC	1 cut(s)	1143
BsrDI	GCAATG	2 cut(s)	1020, 1332
BsrFI	RCCGGY	1 cut(s)	301
BssAI	RCCGGY	1 cut(s)	301
BssECI	CCNNGG	4 cut(s)	9, 116, 117, 468
BssNAI	GTATAC	1 cut(s)	548
BssNI	GRCGYC	2 cut(s)	41, 1390
Bst1107I	GTATAC	1 cut(s)	548
Bst2UI	CCWGG	2 cut(s)	118, 164
Bst4CI	ACNGT	2 cut(s)	742, 980
Bst6I	CTCTTC	4 cut(s)	522, 534, 563, 1467
BstACI	GRCGYC	2 cut(s)	41, 1390
BstAPI	GCANNNNNTGC	1 cut(s)	1244
BstC8I	GCNNGC	2 cut(s)	1249, 1371
BstDEI	CTNAG	5 cut(s)	440, 1053, 1313, 1350, 1463
BstF5I	GGATG	3 cut(s)	379, 898, 990
BstFNI	CGCG	1 cut(s)	1266
BstH2I	RGCGCY	1 cut(s)	1357
BstHHI	GCGC	2 cut(s)	1266, 1356
BstMAI	GTCTC	1 cut(s)	638
BstMWI	GCNNNNNNNGC	3 cut(s)	362, 1031, 1244
BstNI	CCWGG	2 cut(s)	118, 164
BstNSI	RCATGY	2 cut(s)	356, 424
BstSCI	CCNGG	4 cut(s)	116, 162, 467, 468
BstUI	CGCG	1 cut(s)	1266
BstV1I	GCAGC	4 cut(s)	250, 618, 1247, 1289
BstV2I	GAAGAC	3 cut(s)	84, 482, 1300
BstX2I	RGATCY	4 cut(s)	340, 1193, 1345, 1408
BstYI	RGATCY	4 cut(s)	340, 1193, 1345, 1408
BstZ17I	GTATAC	1 cut(s)	548
Bsu15I	ATCGAT	2 cut(s)	181, 1002
BsuRI	GGCC	2 cut(s)	63, 467
BsuTUI	ATCGAT	2 cut(s)	181, 1002
BtgZI	GCGATG	1 cut(s)	624
BtrI	CACGTC	1 cut(s)	73
BtsCI	GGATG	3 cut(s)	379, 898, 990
BtsI	GCAGTG	1 cut(s)	110
BtsIMutI	CAGTG	3 cut(s)	110, 781, 1321
Cac8I	GCNNGC	2 cut(s)	1249, 1371
CaiI	CAGNNNCTG	1 cut(s)	1365
CciI	TCATGA	1 cut(s)	51
CfoI	GCGC	2 cut(s)	1266, 1356
Cfr10I	RCCGGY	1 cut(s)	301
Cfr13I	GGNCC	3 cut(s)	62, 466, 1132
Cfr9I	CCCGGG	1 cut(s)	468
ClaI	ATCGAT	2 cut(s)	181, 1002
Csp6I	GTAC	2 cut(s)	1144, 1169
CviAII	CATG	9 cut(s)	52, 134, 231, 353, 421, 494, 559, 690, 1420
CviQI	GTAC	2 cut(s)	1144, 1169
DdeI	CTNAG	5 cut(s)	440, 1053, 1313, 1350, 1463
DraI	TTTAAA	1 cut(s)	369
DraIII	CACNNNGTG	1 cut(s)	668
Eam1104I	CTCTTC	4 cut(s)	522, 534, 563, 1467
EarI	CTCTTC	4 cut(s)	522, 534, 563, 1467
Eco47I	GGWCC	1 cut(s)	1132
Eco47III	AGCGCT	1 cut(s)	1355
Eco57I	CTGAAG	2 cut(s)	515, 1342
Eco88I	CYCGRG	1 cut(s)	468
EcoRII	CCWGG	2 cut(s)	116, 162
FaeI	CATG	9 cut(s)	55, 137, 234, 356, 424, 497, 562, 693, 1423
FaqI	GGGAC	3 cut(s)	134, 1145, 1464
FatI	CATG	9 cut(s)	51, 133, 230, 352, 420, 493, 558, 689, 1419
FblI	GTMKAC	2 cut(s)	38, 547
Fnu4HI	GCNGC	5 cut(s)	108, 264, 607, 1236, 1278
FokI	GGATG	3 cut(s)	386, 905, 997
Fsp4HI	GCNGC	5 cut(s)	108, 264, 607, 1236, 1278
FspBI	CTAG	2 cut(s)	759, 1197
GlaI	GCGC	2 cut(s)	1265, 1355
GluI	GCNGC	5 cut(s)	108, 264, 607, 1236, 1278
GsuI	CTGGAG	1 cut(s)	470
HaeII	RGCGCY	1 cut(s)	1357
HaeIII	GGCC	2 cut(s)	63, 467
HapII	CCGG	2 cut(s)	302, 469
HhaI	GCGC	2 cut(s)	1266, 1356
Hin1I	GRCGYC	2 cut(s)	41, 1390
Hin1II	CATG	9 cut(s)	55, 137, 234, 356, 424, 497, 562, 693, 1423
Hin6I	GCGC	2 cut(s)	1264, 1354
HinP1I	GCGC	2 cut(s)	1264, 1354
HincII	GTYRAC	2 cut(s)	39, 499
HindII	GTYRAC	2 cut(s)	39, 499
HinfI	GANTC	3 cut(s)	178, 1004, 1028
HpaII	CCGG	2 cut(s)	302, 469
HphI	GGTGA	1 cut(s)	967
Hpy166II	GTNNAC	5 cut(s)	6, 39, 499, 548, 671
Hpy188I	TCNGA	8 cut(s)	316, 398, 522, 534, 838, 912, 984, 1466
Hpy188III	TCNNGA	9 cut(s)	52, 173, 274, 1070, 1197, 1286, 1343, 1349, 1397
Hpy8I	GTNNAC	5 cut(s)	6, 39, 499, 548, 671
HpyAV	CCTTC	6 cut(s)	92, 148, 911, 965, 1101, 1184
HpyCH4III	ACNGT	2 cut(s)	742, 980
HpyCH4IV	ACGT	5 cut(s)	41, 72, 626, 764, 1390
HpyCH4V	TGCA	7 cut(s)	151, 624, 770, 1154, 1216, 1235, 1492
HpyF10VI	GCNNNNNNNGC	3 cut(s)	362, 1031, 1244
HpyF3I	CTNAG	5 cut(s)	440, 1053, 1313, 1350, 1463
HpySE526I	ACGT	5 cut(s)	41, 72, 626, 764, 1390
Hsp92I	GRCGYC	2 cut(s)	41, 1390
Hsp92II	CATG	9 cut(s)	55, 137, 234, 356, 424, 497, 562, 693, 1423
HspAI	GCGC	2 cut(s)	1264, 1354
KpnI	GGTACC	1 cut(s)	1147
LguI	GCTCTTC	2 cut(s)	534, 1467
Lsp1109I	GCAGC	4 cut(s)	250, 618, 1247, 1289
LweI	GCATC	3 cut(s)	314, 864, 1320
MaeI	CTAG	2 cut(s)	759, 1197
MaeII	ACGT	5 cut(s)	41, 72, 626, 764, 1390
MaeIII	GTNAC	5 cut(s)	233, 639, 655, 716, 778
MboII	GAAGA	7 cut(s)	89, 482, 509, 521, 580, 1305, 1484
MflI	RGATCY	4 cut(s)	340, 1193, 1345, 1408
MhlI	GDGCHC	1 cut(s)	328
MmeI	TCCRAC	1 cut(s)	962
MroXI	GAANNNNTTC	2 cut(s)	403, 1065
MseI	TTAA	6 cut(s)	198, 225, 291, 368, 506, 786
MspI	CCGG	2 cut(s)	302, 469
MspR9I	CCNGG	4 cut(s)	118, 164, 469, 470
MvaI	CCWGG	2 cut(s)	118, 164
MvnI	CGCG	1 cut(s)	1266
MwoI	GCNNNNNNNGC	3 cut(s)	362, 1031, 1244
NciI	CCSGG	2 cut(s)	469, 470
NlaIII	CATG	9 cut(s)	55, 137, 234, 356, 424, 497, 562, 693, 1423
NlaIV	GGNNCC	4 cut(s)	342, 1018, 1133, 1145
NmuCI	GTSAC	3 cut(s)	233, 655, 778
NspI	RCATGY	2 cut(s)	356, 424
PagI	TCATGA	1 cut(s)	51
PasI	CCCWGGG	1 cut(s)	117
PciI	ACATGT	1 cut(s)	420
PciSI	GCTCTTC	2 cut(s)	534, 1467
PcsI	WCGNNNNNNNCGW	5 cut(s)	29, 32, 35, 38, 178
PdmI	GAANNNNTTC	2 cut(s)	403, 1065
PfeI	GAWTC	3 cut(s)	178, 1004, 1028
PkrI	GCNGC	5 cut(s)	109, 265, 608, 1237, 1279
PscI	ACATGT	1 cut(s)	420
PshBI	ATTAAT	1 cut(s)	198
Psp6I	CCWGG	2 cut(s)	116, 162
PspGI	CCWGG	2 cut(s)	116, 162
PspN4I	GGNNCC	4 cut(s)	342, 1018, 1133, 1145
PspPI	GGNCC	3 cut(s)	62, 466, 1132
PstNI	CAGNNNCTG	1 cut(s)	1365
PsuI	RGATCY	4 cut(s)	340, 1193, 1345, 1408
RsaI	GTAC	2 cut(s)	1145, 1170
RsaNI	GTAC	2 cut(s)	1144, 1169
SalI	GTCGAC	1 cut(s)	37
SapI	GCTCTTC	2 cut(s)	534, 1467
SaqAI	TTAA	6 cut(s)	198, 225, 291, 368, 506, 786
SatI	GCNGC	5 cut(s)	108, 264, 607, 1236, 1278
Sau96I	GGNCC	3 cut(s)	62, 466, 1132
ScrFI	CCNGG	4 cut(s)	118, 164, 469, 470
SduI	GDGCHC	1 cut(s)	328
SfaNI	GCATC	3 cut(s)	314, 864, 1320
SgrDI	CGTCGACG	1 cut(s)	37
SinI	GGWCC	1 cut(s)	1132
SmaI	CCCGGG	1 cut(s)	470
SmlI	CTYRAG	3 cut(s)	432, 635, 1301
SmoI	CTYRAG	3 cut(s)	432, 635, 1301
SsiI	CCGC	3 cut(s)	107, 1064, 1266
SspMI	CTAG	2 cut(s)	759, 1197
StyD4I	CCNGG	4 cut(s)	116, 162, 467, 468
TaaI	ACNGT	2 cut(s)	742, 980
TaiI	ACGT	5 cut(s)	44, 75, 629, 767, 1393
TaqII	GACCGA	1 cut(s)	71
TauI	GCSGC	1 cut(s)	110
TfiI	GAWTC	3 cut(s)	178, 1004, 1028
Tru1I	TTAA	6 cut(s)	198, 225, 291, 368, 506, 786
Tru9I	TTAA	6 cut(s)	198, 225, 291, 368, 506, 786
TscAI	CASTG	3 cut(s)	117, 781, 1321
TseFI	GTSAC	3 cut(s)	233, 655, 778
TseI	GCWGC	4 cut(s)	263, 606, 1235, 1277
Tsp45I	GTSAC	3 cut(s)	233, 655, 778
TspDTI	ATGAA	6 cut(s)	40, 111, 474, 482, 663, 739
TspGWI	ACGGA	2 cut(s)	343, 348
TspMI	CCCGGG	1 cut(s)	468
TspRI	CASTG	3 cut(s)	117, 781, 1321
VpaK11BI	GGWCC	1 cut(s)	1132
VspI	ATTAAT	1 cut(s)	198
XapI	RAATTY	3 cut(s)	284, 535, 818
XbaI	TCTAGA	1 cut(s)	1196
XceI	RCATGY	2 cut(s)	356, 424
XmaI	CCCGGG	1 cut(s)	468
XmiI	GTMKAC	2 cut(s)	38, 547
XmnI	GAANNNNTTC	2 cut(s)	403, 1065
XspI	CTAG	2 cut(s)	759, 1197
ZraI	GACGTC	2 cut(s)	42, 1391

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.