RLG00000005298

Zein-binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0011994
Physical Location & Seq
Reverse (-)
66585838 .. 66588440
2603 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005298

Sequence Viewer

Length: 2331 bp
ATGAGTTCAAACAAGAAAACAATAACAAAGGGACGCTTCACCCTTTATGTGGAGCAAAACATGGGAGAACTCTCACGCTTCCTGGTCTATGCTGTGCTTGAATGGGTCTTGATCATTCTGCTCTTCATTGATGGCTTTTTTGCTTTTGTTGCCAATGAATTCGCCAAGCTATTTGAGCTCAGATACCCCTGCTGGCTTTGCACCAGGATCGATCACATTCTCGTTAACAGAGGTCGTGATTTCTATTATAATGATTCCATATGTGAATCACACAAGAAAGATGTCTCATACCTTGCTTATTGCCACAACCACAAGAGGCTATCTGACATAAGAAAGATGTGTGAGGCATGTCTTCTATCATTTGCAACCGAAAAAGAGTCTGATTTTGACACATACAAGTCCCTAGTTGGGATCTTGCACAAGGATCTCGAGTGCTTTGTGGAGGATGATGAACATCAAATTCAGCTGAGTGTGCCTGCAGCAAGGACATGGGAGGATGCAGGGTCGATTGAGAAGAGTAGGGACAGCATGACCATAGGGTGTTCATGTTGCGGGGCGCCATTGAAGTTGAGTTCAGCATCCTCCTACTCGAAAGCAAAGAGTGTTAGCGGGATAGCGCAAGCTCCTACGCCTTCTCCACGAGCACCCGCAGGGAGAAATGATGATAATCCTGGTTTGGACTTGCCCCCTATTCGATACCCAGAACTCAAGTTTATGTCTGATAATGAGTCTGAGCTTCCAGAGGATGAGTATGGAACACATACGAAAAATCAAAAGGAAGATCCGAAAGCTGCTACATTGCCATTATTGTCAGAAGGTGATGAGTTAGCTGATGATGCTAACAGGACTCCTATATATGGCAGAGGAAACAGGTTCTTTGGAATCCCACTTTCAGATTCAGCACAAAATAGTCCTAGGGTGGCTATGAGGATTTCAAAGAAATCACCACTCGAAAAGAGCGAGTTTGCTTTGGAATCGGTTGATGGAAATCTTCCAAATGATGCAGATTGTGATTCAATTTTGCACCGTCTGAAGAGACAGGTCCGCCTGGACAGGAAGTCACTGATGGAATTGTACATGGAACTCGATGAAGAAAGAAGTGCTTCAGCTGTAGCAGCCAACAATGCAATGGCTATGATCACAAGGCTACAAGCAGAGAAGGCTGCAGTTCAGATGGAGGCATTGCAATATCAGAGAATGATGGAGGAGCAGGCGGAGTATGACCAAGAAGCCCTGGAAGCAACATATGATTTGCTTGCCAAGAGAGAAGATGATCTCAGGGTTTTAGAGGCTGAAATAGAGGCTTATAGGGAGAAATATGGATTGTTGAAGGAATTTGTCTACAAGGACCAAGATGAGGCTGGTGAATGTGGTACTCCTCAAAGCGTAAAGTATGGCGCAAACAACATGCAAAATGATCAAGCCGGGTCAGCAAAGGAGGAGAATGCAGACGCTGCCCTCGGTGAAAGTTTGAAACCACTGAAAGGGGAGAAGACTTACCTACTTGGGCGGTTCAAGAAACTAGACAAGATGAGAAACTCATCATCTAACGGGTTCTTGCCAGATGGTCTGAATGAGGATGAGATAGGAAATGGAAACAAAGCTGCCCTAACAAGGCAATTGTCGCTGTTGTCTCATCTTAGTGATAGAGTGAAGGCTCTTGAATCTGACACTGGATTCTTAGAGTATGCTGCTAAGACACTTGAGAAACATAGTGAAGGCACAAAACTTTTGACAGAGATAACTCAAAATTTACAGAAGCTCCGGCACCTTGTGAATCTTCCTACTGAGGAACAAAACAAGACGCCTCCGGTGGAACAAAACAAGGAGCGAAGTAAGACGCTTTCGGAGGAACAAAAGGAGCGAAACAAGACGCATCCGGAGGAACAAAAGAAGGAGCAAAACAAGATGCCTCTGGAGGAACAAAATAAGACATCTCCGGAGGAACAAATTCAAAGCAAGACGCCTTCGGAGGAACAAAAGAAGGAGCAAGGTAAGACGCCTGTAGAGGAACAAAAGAATGAGCAAAGTAAGACGCCTCTAGAGGAACAAAAGAAGGAGCAAAGTAAGACGCCTTCGGAGGAACAAAAGAAGGAGCCAAGTAAGACTAAGACGCCTCCGGAGGAACAAAAGAAGGAGCAAAGTAAGACGCCTTCAGAGGAACAAAAGGAGCAAAACAAGACGCCTTCGGAGGAGGAACAAAATGAGCAAAAGAAAATGCTTTCAGATGAACAAAATAAGATTCCTCCGGAGGAACAAAACAAGACGTCTCCGGAAGAACAGAAAAAGGAACAAAAAGACCTTACTTCCATAGTAAAAAGTTGGTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Zein-binding

Protein Analysis

777

Amino Acids

88.3

Weight (kDa)

5.2

Isoelectric Point (pI)

61.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Zein-binding PF04576 343 - 433 2.3e-31 Zein-binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011994)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G18990 AT1G74830
fragaria_vesca FvH4_5g16010
malus_domestica MD06G1183700.v1.1 MD14G1189800.v1.1
prunus_persica Prupe.5G182400_v2.0.a1
pyrus_communis pycom14g15730 pycom14g15740
rosa_chinensis RchiOBHm_Chr7g0180061
rosa_laevigata RLG00000005298
rosa_multiflora Rmu_sc0002219.1_g000024 Rmu_ssc0000119.1_g000026
rosa_roxburghii Rroxscaffold_3G00273160
rosa_rugosa Rorug06G0430200
rosa_samantha Rh7AG030500 Rh7BG030400 Rh7CG032200 Rh7DG031200
rosa_wichuraiana Rw7G002540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 249
AatII GACGTC 1 cut(s) 2270
AccB1I GGYRCC 2 cut(s) 556, 1767
AccI GTMKAC 1 cut(s) 1341
AccIII TCCGGA 5 cut(s) 1879, 1939, 2119, 2248, 2272
AciI CCGC 6 cut(s) 552, 609, 648, 1045, 1214, 1510
AclWI GGATC 4 cut(s) 215, 419, 432, 776
AcsI RAATTY 5 cut(s) 158, 459, 1334, 1750, 1950
AcuI CTGAAG 3 cut(s) 1052, 1089, 2139
AdeI CACNNNGTG 1 cut(s) 1774
AfaI GTAC 2 cut(s) 1076, 1375
AfiI CCNNNNNNNGG 6 cut(s) 49, 408, 857, 1357, 1484, 1614
AhdI GACNNNNNGTC 1 cut(s) 1057
AjnI CCWGG 5 cut(s) 81, 203, 670, 1047, 1233
Alw21I GWGCWC 2 cut(s) 180, 646
Alw26I GTCTC 4 cut(s) 289, 1030, 1638, 2274
AlwI GGATC 4 cut(s) 215, 419, 432, 776
AlwNI CAGNNNCTG 1 cut(s) 1454
Ama87I CYCGRG 1 cut(s) 428
Aor13HI TCCGGA 5 cut(s) 1879, 1939, 2119, 2248, 2272
ApeKI GCWGC 7 cut(s) 479, 791, 1115, 1163, 1454, 1604, 1691
ApoI RAATTY 5 cut(s) 158, 459, 1334, 1750, 1950
Asp700I GAANNNNTTC 2 cut(s) 1102, 1950
AspA2I CCTAGG 1 cut(s) 914
AspLEI GCGC 3 cut(s) 559, 619, 1400
AspS9I GGNCC 2 cut(s) 1042, 1348
AsuC2I CCSGG 1 cut(s) 1426
AsuHPI GGTGA 5 cut(s) 31, 830, 936, 1376, 1475
AvaI CYCGRG 1 cut(s) 428
AvaII GGWCC 2 cut(s) 1042, 1348
AvrII CCTAGG 1 cut(s) 914
BanI GGYRCC 2 cut(s) 556, 1767
BanII GRGCYC 1 cut(s) 180
BarI GAAGNNNNNNTAC 4 cut(s) 2059, 2091, 2137, 2169
BauI CACGAG 1 cut(s) 639
BbsI GAAGAC 2 cut(s) 344, 1499
Bbv12I GWGCWC 2 cut(s) 180, 646
BbvI GCAGC 7 cut(s) 491, 778, 1127, 1150, 1441, 1591, 1678
BccI CCATC 6 cut(s) 125, 977, 1060, 1168, 1195, 1559
BcgI CGANNNNNNTGC 2 cut(s) 190, 224
BciT130I CCWGG 5 cut(s) 83, 205, 672, 1049, 1235
BclI TGATCA 3 cut(s) 111, 1137, 1417
BcnI CCSGG 1 cut(s) 1426
BcoDI GTCTC 4 cut(s) 289, 1030, 1638, 2274
BfaI CTAG 4 cut(s) 404, 915, 1523, 2042
BfmI CTRYAG 4 cut(s) 477, 1110, 1164, 2004
BfoI RGCGCY 1 cut(s) 560
BisI GCNGC 7 cut(s) 480, 792, 1116, 1164, 1455, 1605, 1692
BlnI CCTAGG 1 cut(s) 914
BlsI GCNGC 7 cut(s) 481, 793, 1117, 1165, 1456, 1606, 1693
Bme1390I CCNGG 6 cut(s) 83, 205, 672, 1049, 1235, 1426
Bme18I GGWCC 2 cut(s) 1042, 1348
BmeRI GACNNNNNGTC 1 cut(s) 1057
BmeT110I CYCGRG 1 cut(s) 428
BmgT120I GGNCC 2 cut(s) 1042, 1348
BmiI GGNNCC 3 cut(s) 558, 1769, 2097
BmrFI CCNGG 6 cut(s) 83, 205, 672, 1049, 1235, 1426
BmsI GCATC 6 cut(s) 487, 587, 826, 991, 1885, 1899
BpiI GAAGAC 2 cut(s) 344, 1499
BpmI CTGGAG 1 cut(s) 1937
BpuEI CTTGAG 2 cut(s) 692, 1724
BpuMI CCSGG 1 cut(s) 1426
Bsa29I ATCGAT 1 cut(s) 210
BsaBI GATNNNNATC 3 cut(s) 453, 666, 987
BsaJI CCNNGG 3 cut(s) 914, 1233, 1459
BsaWI WCCGGW 6 cut(s) 1810, 1879, 1939, 2119, 2248, 2272
BsaXI ACNNNNNCTCC 4 cut(s) 619, 649, 1746, 1776
Bsc4I CCNNNNNNNGG 6 cut(s) 49, 408, 857, 1357, 1484, 1614
Bse1I ACTGG 1 cut(s) 1678
Bse3DI GCAATG 3 cut(s) 797, 1134, 1181
Bse8I GATNNNNATC 3 cut(s) 453, 666, 987
BseAI TCCGGA 5 cut(s) 1879, 1939, 2119, 2248, 2272
BseBI CCWGG 5 cut(s) 83, 205, 672, 1049, 1235
BseCI ATCGAT 1 cut(s) 210
BseDI CCNNGG 3 cut(s) 914, 1233, 1459
BseGI GGATG 6 cut(s) 451, 502, 578, 751, 1585, 1876
BseJI GATNNNNATC 3 cut(s) 453, 666, 987
BseLI CCNNNNNNNGG 6 cut(s) 49, 408, 857, 1357, 1484, 1614
BseMI GCAATG 3 cut(s) 797, 1134, 1181
BseMII CTCAG 5 cut(s) 193, 458, 723, 1291, 1779
BseNI ACTGG 1 cut(s) 1678
BseRI GAGGAG 4 cut(s) 1220, 1368, 1454, 2207
BseXI GCAGC 7 cut(s) 491, 778, 1127, 1150, 1441, 1591, 1678
BshNI GGYRCC 2 cut(s) 556, 1767
BshVI ATCGAT 1 cut(s) 210
BsiHKAI GWGCWC 2 cut(s) 180, 646
BsiHKCI CYCGRG 1 cut(s) 428
BsiSI CCGG 8 cut(s) 1425, 1765, 1811, 1880, 1940, 2120, 2249, 2273
BslFI GGGAC 3 cut(s) 45, 385, 536
BslI CCNNNNNNNGG 6 cut(s) 49, 408, 857, 1357, 1484, 1614
BsmAI GTCTC 4 cut(s) 289, 1030, 1638, 2274
BsmBI CGTCTC 1 cut(s) 2274
BsmFI GGGAC 3 cut(s) 45, 385, 536
BsmI GAATGC 1 cut(s) 1450
BsoBI CYCGRG 1 cut(s) 428
Bsp1286I GDGCHC 2 cut(s) 180, 646
Bsp13I TCCGGA 5 cut(s) 1879, 1939, 2119, 2248, 2272
Bsp1407I TGTACA 1 cut(s) 1074
Bsp143I GATC 9 cut(s) 111, 207, 211, 411, 424, 781, 1137, 1273, 1417
BspACI CCGC 6 cut(s) 552, 609, 648, 1045, 1214, 1510
BspCNI CTCAG 5 cut(s) 192, 459, 724, 1290, 1780
BspDI ATCGAT 1 cut(s) 210
BspEI TCCGGA 5 cut(s) 1879, 1939, 2119, 2248, 2272
BspLI GGNNCC 3 cut(s) 558, 1769, 2097
BspMAI CTGCAG 2 cut(s) 481, 1168
BspPI GGATC 4 cut(s) 215, 419, 432, 776
BspQI GCTCTTC 1 cut(s) 128
BspT107I GGYRCC 2 cut(s) 556, 1767
BsrDI GCAATG 3 cut(s) 797, 1134, 1181
BsrGI TGTACA 1 cut(s) 1074
BsrI ACTGG 1 cut(s) 1678
BssECI CCNNGG 3 cut(s) 914, 1233, 1459
BssMI GATC 9 cut(s) 111, 207, 211, 411, 424, 781, 1137, 1273, 1417
BssSI CACGAG 1 cut(s) 639
BssT1I CCWWGG 1 cut(s) 914
Bst2BI CACGAG 1 cut(s) 639
Bst2UI CCWGG 5 cut(s) 83, 205, 672, 1049, 1235
Bst4CI ACNGT 1 cut(s) 1028
Bst6I CTCTTC 3 cut(s) 128, 509, 1028
BstAPI GCANNNNNTGC 1 cut(s) 1454
BstAUI TGTACA 1 cut(s) 1074
BstC8I GCNNGC 5 cut(s) 194, 477, 621, 1212, 1257
BstDEI CTNAG 9 cut(s) 179, 467, 732, 1277, 1640, 1681, 1695, 1788, 2109
BstF5I GGATG 6 cut(s) 451, 502, 578, 751, 1585, 1876
BstH2I RGCGCY 1 cut(s) 560
BstHHI GCGC 3 cut(s) 559, 619, 1400
BstKTI GATC 9 cut(s) 114, 210, 214, 414, 427, 784, 1140, 1276, 1420
BstMAI GTCTC 4 cut(s) 289, 1030, 1638, 2274
BstMBI GATC 9 cut(s) 111, 207, 211, 411, 424, 781, 1137, 1273, 1417
BstNI CCWGG 5 cut(s) 83, 205, 672, 1049, 1235
BstNSI RCATGY 2 cut(s) 351, 1411
BstSCI CCNGG 6 cut(s) 81, 203, 670, 1047, 1233, 1424
BstSFI CTRYAG 4 cut(s) 477, 1110, 1164, 2004
BstV1I GCAGC 7 cut(s) 491, 778, 1127, 1150, 1441, 1591, 1678
BstV2I GAAGAC 2 cut(s) 344, 1499
BstX2I RGATCY 3 cut(s) 411, 424, 781
BstYI RGATCY 3 cut(s) 411, 424, 781
Bsu15I ATCGAT 1 cut(s) 210
BsuTUI ATCGAT 1 cut(s) 210
BtsCI GGATG 6 cut(s) 451, 502, 578, 751, 1585, 1876
BtsIMutI CAGTG 3 cut(s) 1061, 1478, 1671
Cac8I GCNNGC 5 cut(s) 194, 477, 621, 1212, 1257
CaiI CAGNNNCTG 1 cut(s) 1454
CfoI GCGC 3 cut(s) 559, 619, 1400
Cfr13I GGNCC 2 cut(s) 1042, 1348
ClaI ATCGAT 1 cut(s) 210
Csp6I GTAC 2 cut(s) 1075, 1374
CviAII CATG 7 cut(s) 61, 348, 489, 529, 546, 1078, 1408
CviQI GTAC 2 cut(s) 1075, 1374
DdeI CTNAG 9 cut(s) 179, 467, 732, 1277, 1640, 1681, 1695, 1788, 2109
DinI GGCGCC 1 cut(s) 558
DpnI GATC 9 cut(s) 113, 209, 213, 413, 426, 783, 1139, 1275, 1419
DpnII GATC 9 cut(s) 111, 207, 211, 411, 424, 781, 1137, 1273, 1417
DraIII CACNNNGTG 1 cut(s) 1774
DriI GACNNNNNGTC 1 cut(s) 1057
Eam1104I CTCTTC 3 cut(s) 128, 509, 1028
Eam1105I GACNNNNNGTC 1 cut(s) 1057
EarI CTCTTC 3 cut(s) 128, 509, 1028
EciI GGCGGA 2 cut(s) 1034, 1229
Ecl136II GAGCTC 1 cut(s) 178
Eco130I CCWWGG 1 cut(s) 914
Eco24I GRGCYC 1 cut(s) 180
Eco47I GGWCC 2 cut(s) 1042, 1348
Eco53kI GAGCTC 1 cut(s) 178
Eco57I CTGAAG 3 cut(s) 1052, 1089, 2139
Eco88I CYCGRG 1 cut(s) 428
EcoICRI GAGCTC 1 cut(s) 178
EcoRI GAATTC 1 cut(s) 158
EcoRII CCWGG 5 cut(s) 81, 203, 670, 1047, 1233
EcoT14I CCWWGG 1 cut(s) 914
EcoT38I GRGCYC 1 cut(s) 180
EgeI GGCGCC 1 cut(s) 558
EheI GGCGCC 1 cut(s) 558
ErhI CCWWGG 1 cut(s) 914
Esp3I CGTCTC 1 cut(s) 2274
FaeI CATG 7 cut(s) 64, 351, 492, 532, 549, 1081, 1411
FalI AAGNNNNNCTT 4 cut(s) 20, 52, 1087, 1119
FaqI GGGAC 3 cut(s) 45, 385, 536
FatI CATG 7 cut(s) 60, 347, 488, 528, 545, 1077, 1407
FauI CCCGC 3 cut(s) 545, 602, 655
FauNDI CATATG 2 cut(s) 260, 1246
FbaI TGATCA 3 cut(s) 111, 1137, 1417
FblI GTMKAC 1 cut(s) 1341
Fnu4HI GCNGC 7 cut(s) 480, 792, 1116, 1164, 1455, 1605, 1692
FokI GGATG 6 cut(s) 458, 509, 565, 758, 1592, 1863
FriOI GRGCYC 1 cut(s) 180
Fsp4HI GCNGC 7 cut(s) 480, 792, 1116, 1164, 1455, 1605, 1692
FspBI CTAG 4 cut(s) 404, 915, 1523, 2042
GlaI GCGC 3 cut(s) 558, 618, 1399
GluI GCNGC 7 cut(s) 480, 792, 1116, 1164, 1455, 1605, 1692
GsuI CTGGAG 1 cut(s) 1937
HaeII RGCGCY 1 cut(s) 560
HapII CCGG 8 cut(s) 1425, 1765, 1811, 1880, 1940, 2120, 2249, 2273
HhaI GCGC 3 cut(s) 559, 619, 1400
Hin1II CATG 7 cut(s) 64, 351, 492, 532, 549, 1081, 1411
Hin6I GCGC 3 cut(s) 557, 617, 1398
HinP1I GCGC 3 cut(s) 557, 617, 1398
HincII GTYRAC 1 cut(s) 226
HindII GTYRAC 1 cut(s) 226
HpaI GTTAAC 1 cut(s) 226
HpaII CCGG 8 cut(s) 1425, 1765, 1811, 1880, 1940, 2120, 2249, 2273
HphI GGTGA 5 cut(s) 31, 830, 936, 1376, 1475
Hpy166II GTNNAC 2 cut(s) 226, 1342
Hpy8I GTNNAC 2 cut(s) 226, 1342
HpyCH4III ACNGT 1 cut(s) 1028
HpyCH4IV ACGT 1 cut(s) 2267
HpyF3I CTNAG 9 cut(s) 179, 467, 732, 1277, 1640, 1681, 1695, 1788, 2109
HpySE526I ACGT 1 cut(s) 2267
Hsp92II CATG 7 cut(s) 64, 351, 492, 532, 549, 1081, 1411
HspAI GCGC 3 cut(s) 557, 617, 1398
KasI GGCGCC 1 cut(s) 556
Kpn2I TCCGGA 5 cut(s) 1879, 1939, 2119, 2248, 2272
Ksp22I TGATCA 3 cut(s) 111, 1137, 1417
KspAI GTTAAC 1 cut(s) 226
Kzo9I GATC 9 cut(s) 111, 207, 211, 411, 424, 781, 1137, 1273, 1417
LguI GCTCTTC 1 cut(s) 128
Lsp1109I GCAGC 7 cut(s) 491, 778, 1127, 1150, 1441, 1591, 1678
LweI GCATC 6 cut(s) 487, 587, 826, 991, 1885, 1899
MaeI CTAG 4 cut(s) 404, 915, 1523, 2042
MaeII ACGT 1 cut(s) 2267
MaeIII GTNAC 1 cut(s) 1059
MalI GATC 9 cut(s) 113, 209, 213, 413, 426, 783, 1139, 1275, 1419
MboI GATC 9 cut(s) 111, 207, 211, 411, 424, 781, 1137, 1273, 1417
MfeI CAATTG 1 cut(s) 1619
MflI RGATCY 3 cut(s) 411, 424, 781
MhlI GDGCHC 2 cut(s) 180, 646
MluCI AATT 8 cut(s) 158, 459, 1017, 1070, 1334, 1619, 1750, 1950
Mly113I GGCGCC 1 cut(s) 557
MlyI GAGTC 3 cut(s) 386, 737, 841
MroI TCCGGA 5 cut(s) 1879, 1939, 2119, 2248, 2272
MroXI GAANNNNTTC 2 cut(s) 1102, 1950
MseI TTAA 1 cut(s) 225
MslI CAYNNNNRTG 1 cut(s) 1641
MspA1I CMGCKG 2 cut(s) 466, 1109
MspI CCGG 8 cut(s) 1425, 1765, 1811, 1880, 1940, 2120, 2249, 2273
MspR9I CCNGG 6 cut(s) 83, 205, 672, 1049, 1235, 1426
MunI CAATTG 1 cut(s) 1619
Mva1269I GAATGC 1 cut(s) 1450
MvaI CCWGG 5 cut(s) 83, 205, 672, 1049, 1235
NarI GGCGCC 1 cut(s) 557
NciI CCSGG 1 cut(s) 1426
NdeI CATATG 2 cut(s) 260, 1246
NdeII GATC 9 cut(s) 111, 207, 211, 411, 424, 781, 1137, 1273, 1417
NlaIII CATG 7 cut(s) 64, 351, 492, 532, 549, 1081, 1411
NlaIV GGNNCC 3 cut(s) 558, 1769, 2097
NmuCI GTSAC 1 cut(s) 1059
NspI RCATGY 2 cut(s) 351, 1411
PaeR7I CTCGAG 1 cut(s) 428
PciSI GCTCTTC 1 cut(s) 128
PcsI WCGNNNNNNNCGW 1 cut(s) 957
PctI GAATGC 1 cut(s) 1450
PdmI GAANNNNTTC 2 cut(s) 1102, 1950
PkrI GCNGC 7 cut(s) 481, 793, 1117, 1165, 1456, 1606, 1693
PleI GAGTC 3 cut(s) 385, 736, 841
PluTI GGCGCC 1 cut(s) 560
PpsI GAGTC 3 cut(s) 385, 736, 841
PsiI TTATAA 1 cut(s) 249
Psp124BI GAGCTC 1 cut(s) 180
Psp6I CCWGG 5 cut(s) 81, 203, 670, 1047, 1233
PspGI CCWGG 5 cut(s) 81, 203, 670, 1047, 1233
PspN4I GGNNCC 3 cut(s) 558, 1769, 2097
PspPI GGNCC 2 cut(s) 1042, 1348
PstI CTGCAG 2 cut(s) 481, 1168
PstNI CAGNNNCTG 1 cut(s) 1454
PsuI RGATCY 3 cut(s) 411, 424, 781
PvuII CAGCTG 2 cut(s) 466, 1109
RsaI GTAC 2 cut(s) 1076, 1375
RsaNI GTAC 2 cut(s) 1075, 1374
RseI CAYNNNNRTG 1 cut(s) 1641
SacI GAGCTC 1 cut(s) 180
SapI GCTCTTC 1 cut(s) 128
SaqAI TTAA 1 cut(s) 225
SatI GCNGC 7 cut(s) 480, 792, 1116, 1164, 1455, 1605, 1692
Sau3AI GATC 9 cut(s) 111, 207, 211, 411, 424, 781, 1137, 1273, 1417
Sau96I GGNCC 2 cut(s) 1042, 1348
SchI GAGTC 3 cut(s) 386, 737, 841
ScrFI CCNGG 6 cut(s) 83, 205, 672, 1049, 1235, 1426
SduI GDGCHC 2 cut(s) 180, 646
SfaNI GCATC 6 cut(s) 487, 587, 826, 991, 1885, 1899
SfcI CTRYAG 4 cut(s) 477, 1110, 1164, 2004
SfoI GGCGCC 1 cut(s) 558
Sfr274I CTCGAG 1 cut(s) 428
SinI GGWCC 2 cut(s) 1042, 1348
SlaI CTCGAG 1 cut(s) 428
SmiMI CAYNNNNRTG 1 cut(s) 1641
SmlI CTYRAG 3 cut(s) 428, 707, 1703
SmoI CTYRAG 3 cut(s) 428, 707, 1703
Sse9I AATT 8 cut(s) 158, 459, 1017, 1070, 1334, 1619, 1750, 1950
SsiI CCGC 6 cut(s) 552, 609, 648, 1045, 1214, 1510
SspDI GGCGCC 1 cut(s) 556
SspMI CTAG 4 cut(s) 404, 915, 1523, 2042
SstI GAGCTC 1 cut(s) 180
StyD4I CCNGG 6 cut(s) 81, 203, 670, 1047, 1233, 1424
StyI CCWWGG 1 cut(s) 914
TaaI ACNGT 1 cut(s) 1028
TaiI ACGT 1 cut(s) 2270
TaqI TCGA 7 cut(s) 210, 429, 506, 590, 694, 951, 1086
TasI AATT 8 cut(s) 158, 459, 1017, 1070, 1334, 1619, 1750, 1950
TatI WGTACW 1 cut(s) 1074
Tru1I TTAA 1 cut(s) 225
Tru9I TTAA 1 cut(s) 225
TscAI CASTG 3 cut(s) 1068, 1485, 1678
TseFI GTSAC 1 cut(s) 1059
TseI GCWGC 7 cut(s) 479, 791, 1115, 1163, 1454, 1604, 1691
Tsp45I GTSAC 1 cut(s) 1059
TspDTI ATGAA 6 cut(s) 115, 171, 465, 534, 1104, 2244
TspRI CASTG 3 cut(s) 1068, 1485, 1678
VpaK11BI GGWCC 2 cut(s) 1042, 1348
XapI RAATTY 5 cut(s) 158, 459, 1334, 1750, 1950
XbaI TCTAGA 1 cut(s) 2041
XceI RCATGY 2 cut(s) 351, 1411
XcmI CCANNNNNNNNNTGG 2 cut(s) 1126, 1358
XhoI CTCGAG 1 cut(s) 428
XmaJI CCTAGG 1 cut(s) 914
XmiI GTMKAC 1 cut(s) 1341
XmnI GAANNNNTTC 2 cut(s) 1102, 1950
XspI CTAG 4 cut(s) 404, 915, 1523, 2042
ZraI GACGTC 1 cut(s) 2268
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.