ABC transporter C family member
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0213701 |
| rosa_laevigata | RLG00000006914 |
| rosa_multiflora | Rmu_co8420433.1_g000001 Rmu_sc0007885.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00244840 Rroxscaffold_6G00423320 Rroxscaffold_7G00183790 |
| rosa_rugosa | Rorug03G0123500 |
| rosa_samantha | Rh2CG327200 Rh4CG331800 Rh4DG103900 Rh5BG175500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 172 |
| AcsI | RAATTY | 1 cut(s) | 117 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 70 |
| AflII | CTTAAG | 1 cut(s) | 122 |
| AflIII | ACRYGT | 1 cut(s) | 232 |
| AluBI | AGCT | 1 cut(s) | 92 |
| AluI | AGCT | 1 cut(s) | 92 |
| Alw21I | GWGCWC | 1 cut(s) | 25 |
| AoxI | GGCC | 1 cut(s) | 72 |
| ApeKI | GCWGC | 1 cut(s) | 305 |
| ApoI | RAATTY | 1 cut(s) | 117 |
| AseI | ATTAAT | 1 cut(s) | 135 |
| AspS9I | GGNCC | 1 cut(s) | 72 |
| Bbv12I | GWGCWC | 1 cut(s) | 25 |
| BbvI | GCAGC | 1 cut(s) | 292 |
| BccI | CCATC | 4 cut(s) | 35, 103, 151, 273 |
| BfaI | CTAG | 2 cut(s) | 54, 93 |
| BfrI | CTTAAG | 1 cut(s) | 122 |
| BisI | GCNGC | 1 cut(s) | 306 |
| BlsI | GCNGC | 1 cut(s) | 307 |
| BmgT120I | GGNCC | 1 cut(s) | 72 |
| BmiI | GGNNCC | 1 cut(s) | 129 |
| BmsI | GCATC | 1 cut(s) | 262 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 70 |
| BseGI | GGATG | 3 cut(s) | 114, 265, 311 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 70 |
| BseXI | GCAGC | 1 cut(s) | 292 |
| BshFI | GGCC | 1 cut(s) | 74 |
| BsiHKAI | GWGCWC | 1 cut(s) | 25 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 70 |
| BsnI | GGCC | 1 cut(s) | 74 |
| Bsp1286I | GDGCHC | 1 cut(s) | 25 |
| BspACI | CCGC | 1 cut(s) | 172 |
| BspANI | GGCC | 1 cut(s) | 74 |
| BspHI | TCATGA | 1 cut(s) | 225 |
| BspLI | GGNNCC | 1 cut(s) | 129 |
| BspTI | CTTAAG | 1 cut(s) | 122 |
| BstAFI | CTTAAG | 1 cut(s) | 122 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 305 |
| BstF5I | GGATG | 3 cut(s) | 114, 265, 311 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 305 |
| BstNSI | RCATGY | 1 cut(s) | 236 |
| BstV1I | GCAGC | 1 cut(s) | 292 |
| BsuRI | GGCC | 1 cut(s) | 74 |
| BtsCI | GGATG | 3 cut(s) | 114, 265, 311 |
| CciI | TCATGA | 1 cut(s) | 225 |
| Cfr13I | GGNCC | 1 cut(s) | 72 |
| CviAII | CATG | 3 cut(s) | 105, 226, 233 |
| CviJI | RGCY | 4 cut(s) | 57, 74, 92, 128 |
| CviKI_1 | RGCY | 4 cut(s) | 57, 74, 92, 128 |
| EcoO109I | RGGNCCY | 1 cut(s) | 72 |
| EcoRI | GAATTC | 1 cut(s) | 117 |
| FaeI | CATG | 3 cut(s) | 108, 229, 236 |
| FaiI | YATR | 4 cut(s) | 106, 218, 227, 234 |
| FatI | CATG | 3 cut(s) | 104, 225, 232 |
| Fnu4HI | GCNGC | 1 cut(s) | 306 |
| FokI | GGATG | 3 cut(s) | 121, 252, 298 |
| Fsp4HI | GCNGC | 1 cut(s) | 306 |
| FspBI | CTAG | 2 cut(s) | 54, 93 |
| GluI | GCNGC | 1 cut(s) | 306 |
| HaeIII | GGCC | 1 cut(s) | 74 |
| Hin1II | CATG | 3 cut(s) | 108, 229, 236 |
| HinfI | GANTC | 3 cut(s) | 41, 60, 193 |
| Hpy188I | TCNGA | 2 cut(s) | 20, 316 |
| Hpy188III | TCNNGA | 4 cut(s) | 64, 178, 226, 269 |
| HpyAV | CCTTC | 2 cut(s) | 60, 271 |
| HpyCH4IV | ACGT | 1 cut(s) | 243 |
| HpyCH4V | TGCA | 5 cut(s) | 104, 220, 238, 299, 308 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 305 |
| HpySE526I | ACGT | 1 cut(s) | 243 |
| Hsp92II | CATG | 3 cut(s) | 108, 229, 236 |
| LmnI | GCTCC | 1 cut(s) | 133 |
| LpnPI | CCDG | 2 cut(s) | 77, 282 |
| Lsp1109I | GCAGC | 1 cut(s) | 292 |
| LweI | GCATC | 1 cut(s) | 262 |
| MaeI | CTAG | 2 cut(s) | 54, 93 |
| MaeII | ACGT | 1 cut(s) | 243 |
| MboII | GAAGA | 1 cut(s) | 196 |
| MhlI | GDGCHC | 1 cut(s) | 25 |
| MluCI | AATT | 2 cut(s) | 117, 132 |
| MlyI | GAGTC | 1 cut(s) | 35 |
| MmeI | TCCRAC | 1 cut(s) | 94 |
| MnlI | CCTC | 1 cut(s) | 150 |
| MseI | TTAA | 2 cut(s) | 123, 135 |
| MslI | CAYNNNNRTG | 1 cut(s) | 270 |
| MspCI | CTTAAG | 1 cut(s) | 122 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 305 |
| NlaIII | CATG | 3 cut(s) | 108, 229, 236 |
| NlaIV | GGNNCC | 1 cut(s) | 129 |
| NspI | RCATGY | 1 cut(s) | 236 |
| PagI | TCATGA | 1 cut(s) | 225 |
| PciI | ACATGT | 1 cut(s) | 232 |
| PfeI | GAWTC | 2 cut(s) | 60, 193 |
| PkrI | GCNGC | 1 cut(s) | 307 |
| PleI | GAGTC | 1 cut(s) | 35 |
| PpsI | GAGTC | 1 cut(s) | 35 |
| PscI | ACATGT | 1 cut(s) | 232 |
| PshBI | ATTAAT | 1 cut(s) | 135 |
| PspN4I | GGNNCC | 1 cut(s) | 129 |
| PspPI | GGNCC | 1 cut(s) | 72 |
| RseI | CAYNNNNRTG | 1 cut(s) | 270 |
| SaqAI | TTAA | 2 cut(s) | 123, 135 |
| SatI | GCNGC | 1 cut(s) | 306 |
| Sau96I | GGNCC | 1 cut(s) | 72 |
| SchI | GAGTC | 1 cut(s) | 35 |
| SduI | GDGCHC | 1 cut(s) | 25 |
| SetI | ASST | 2 cut(s) | 94, 246 |
| SfaNI | GCATC | 1 cut(s) | 262 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 270 |
| SmlI | CTYRAG | 1 cut(s) | 122 |
| SmoI | CTYRAG | 1 cut(s) | 122 |
| Sse9I | AATT | 2 cut(s) | 117, 132 |
| SsiI | CCGC | 1 cut(s) | 172 |
| SspMI | CTAG | 2 cut(s) | 54, 93 |
| TaiI | ACGT | 1 cut(s) | 246 |
| TaqI | TCGA | 1 cut(s) | 39 |
| TasI | AATT | 2 cut(s) | 117, 132 |
| TfiI | GAWTC | 2 cut(s) | 60, 193 |
| Tru1I | TTAA | 2 cut(s) | 123, 135 |
| Tru9I | TTAA | 2 cut(s) | 123, 135 |
| TseI | GCWGC | 1 cut(s) | 305 |
| TspDTI | ATGAA | 2 cut(s) | 197, 214 |
| Vha464I | CTTAAG | 1 cut(s) | 122 |
| VspI | ATTAAT | 1 cut(s) | 135 |
| XapI | RAATTY | 1 cut(s) | 117 |
| XceI | RCATGY | 1 cut(s) | 236 |
| XspI | CTAG | 2 cut(s) | 54, 93 |