Rh2CG327200

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
42538480 .. 42545711
7232 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG327200.1

Sequence Viewer

Length: 276 bp
ATGTGGTTTGCAGAGAAAACACTCGATGGAGGAAGCTGCTGTTCTGTGTGTTACCAGATTAAAGGCCAAATAAAGGAGGTCTTTGTGGTGCTGCACTGCCAAATTAGTCCAGAGTCAACAAATGCCTTGGTTATATCTAAGCAGACCATTCTACTTTGTGTAGAGGTTTTGAGGAGCTGCTCATGTCTTTCTATAACAACAAGGAAAACCGCTAATTTTCAAGCCAACATCCATCAAACGGTTCTCATTATTGTTTTTCATCTATTGCTTTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

91

Amino Acids

10.19

Weight (kDa)

8.2

Isoelectric Point (pI)

42.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 210
AfiI CCNNNNNNNGG 2 cut(s) 73, 238
AgsI TTSAA 1 cut(s) 221
AluBI AGCT 2 cut(s) 36, 177
AluI AGCT 2 cut(s) 36, 177
AoxI GGCC 1 cut(s) 64
ApeKI GCWGC 3 cut(s) 36, 91, 177
BbvI GCAGC 3 cut(s) 23, 78, 164
BccI CCATC 2 cut(s) 20, 240
BisI GCNGC 3 cut(s) 37, 92, 178
BlsI GCNGC 3 cut(s) 38, 93, 179
BsaJI CCNNGG 1 cut(s) 126
Bsc4I CCNNNNNNNGG 2 cut(s) 73, 238
BseDI CCNNGG 1 cut(s) 126
BseGI GGATG 1 cut(s) 228
BseLI CCNNNNNNNGG 2 cut(s) 73, 238
BseRI GAGGAG 1 cut(s) 187
BseXI GCAGC 3 cut(s) 23, 78, 164
BsgI GTGCAG 1 cut(s) 77
BshFI GGCC 1 cut(s) 66
BslI CCNNNNNNNGG 2 cut(s) 73, 238
BsnI GGCC 1 cut(s) 66
BspACI CCGC 1 cut(s) 210
BspANI GGCC 1 cut(s) 66
BssECI CCNNGG 1 cut(s) 126
BssT1I CCWWGG 1 cut(s) 126
Bst4CI ACNGT 1 cut(s) 241
BstDEI CTNAG 1 cut(s) 138
BstF5I GGATG 1 cut(s) 228
BstV1I GCAGC 3 cut(s) 23, 78, 164
BsuRI GGCC 1 cut(s) 66
BtsCI GGATG 1 cut(s) 228
BtsI GCAGTG 1 cut(s) 94
BtsIMutI CAGTG 1 cut(s) 94
CviAII CATG 1 cut(s) 183
CviJI RGCY 4 cut(s) 36, 66, 177, 224
CviKI_1 RGCY 4 cut(s) 36, 66, 177, 224
DdeI CTNAG 1 cut(s) 138
Eco130I CCWWGG 1 cut(s) 126
EcoT14I CCWWGG 1 cut(s) 126
ErhI CCWWGG 1 cut(s) 126
FaeI CATG 1 cut(s) 186
FaiI YATR 3 cut(s) 134, 184, 194
FalI AAGNNNNNCTT 2 cut(s) 65, 97
FatI CATG 1 cut(s) 182
Fnu4HI GCNGC 3 cut(s) 37, 92, 178
FokI GGATG 1 cut(s) 215
Fsp4HI GCNGC 3 cut(s) 37, 92, 178
GluI GCNGC 3 cut(s) 37, 92, 178
HaeIII GGCC 1 cut(s) 66
Hin1II CATG 1 cut(s) 186
HincII GTYRAC 1 cut(s) 117
HindII GTYRAC 1 cut(s) 117
HinfI GANTC 1 cut(s) 113
Hpy166II GTNNAC 1 cut(s) 117
Hpy188III TCNNGA 1 cut(s) 110
Hpy8I GTNNAC 1 cut(s) 117
HpyCH4III ACNGT 1 cut(s) 241
HpyCH4V TGCA 2 cut(s) 11, 94
HpyF3I CTNAG 1 cut(s) 138
Hsp92II CATG 1 cut(s) 186
LmnI GCTCC 1 cut(s) 174
LpnPI CCDG 2 cut(s) 68, 123
Lsp1109I GCAGC 3 cut(s) 23, 78, 164
MaeIII GTNAC 1 cut(s) 50
MluCI AATT 2 cut(s) 102, 214
MlyI GAGTC 1 cut(s) 122
MnlI CCTC 4 cut(s) 23, 70, 157, 165
MseI TTAA 1 cut(s) 60
NlaIII CATG 1 cut(s) 186
PkrI GCNGC 3 cut(s) 38, 93, 179
PleI GAGTC 1 cut(s) 121
PpsI GAGTC 1 cut(s) 121
SaqAI TTAA 1 cut(s) 60
SatI GCNGC 3 cut(s) 37, 92, 178
SchI GAGTC 1 cut(s) 122
SetI ASST 4 cut(s) 38, 81, 168, 179
SgeI CNNG 7 cut(s) 35, 67, 122, 139, 195, 213, 233
Sse9I AATT 2 cut(s) 102, 214
SsiI CCGC 1 cut(s) 210
StyI CCWWGG 1 cut(s) 126
TaaI ACNGT 1 cut(s) 241
TaqI TCGA 1 cut(s) 24
TasI AATT 2 cut(s) 102, 214
Tru1I TTAA 1 cut(s) 60
Tru9I TTAA 1 cut(s) 60
TscAI CASTG 1 cut(s) 101
TseI GCWGC 3 cut(s) 36, 91, 177
TspDTI ATGAA 1 cut(s) 248
TspRI CASTG 1 cut(s) 101
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.