Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0017829

Physical Location & Seq

Genomic Coordinates Reverse (-)

9963126 .. 9965189

Gene Structure 2064 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0123500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2064 bp

ATGCTACACCACAGAAAACTCCACCTGGTACTTAATCTAGATCGCACCCTGCTGGATCACGCGCAACTCAGTGATCTGACCCCTGAAGAAGAAGAATATGTAAAGACTTTAACGATGGATCATCCTCTGCCTTTGCAAGATGTTCTCAAAGTGCAAGATTGTCCCAAAATGAAGCCTATAATTTTCAAGCTTAGGCCCTTTGCGAGAGCCTTTCTGAAGGAAGCCAGTGACATGTTTGAAATTTATGCATACTCAAATGCTTCTCGATATCTTGTGTGGAAAATGGTTGAGCTACTCGATCCTACAAATGAGTACTTTGGTCATAGAGTGATATCGCGTGAGGATTTCATTAGCACCTTTGCTGGAAAGAAGTGTCTTGATCTTGTGCTTGCCCAAGAGTCTACTGTTCTGATCCTTGATCATAAGAAAGAGACATGGACGGAGCAAAATCAAAATAATATAGTACTAACGCAGAAGTATCAGTTCTTTAAAGGAAGGAGTGAACAAAACAGTGAGTTCAAGTCCCATTGTGAGTTGAAAACTGATGAGGGGGCGTATCTTGCAGTCATCCTTCAACATCTTAAGCTAATTCACAGCAGCTTCTTTGATGATCAAGTGATGTGTGACAACCTTATTGAAAGAGATGTGAGGAAGGTGTTGAAAAATCTTCGGCAACAGAAGCTGGCAGAGCAGTTGGGAACTACTTGTGATGAACAAATGGATCTATCGACCACACAGGTGGCTGGGGCTCACGTTGGACTACCTGCTCGTTCATTGCAAATGGATTTTCCTGCTCGCTCACAGGAGGTTGCAAGTAATTATGAGATGGCAAAAAGGCGTAACTTAACGATTGATCATGGGGGAACAACAAGCAGCACAGATCATCAGGAGATCGGGGTTGTTTCTGCTTCTTCTTTGTGTGATTATTGTGCCAACTTTGCTGACAGATACGGTTTTCTACACGAGGGGCTCTTAACCACCCTAAGTGCTGAACACATTTACCGTTTGCACAAGCACAACACACAGAAAATGCTAGTCCACAAAAAACTCCACCTGGTAATTAATCTGGATCACACCTTTCTGAGTCACACAAGGCTCAGTGATCTGACCCCAGAAGAAGCAGAATATTTAAAGGTCCAAGAAGATTCCCAAGATATTTTCACAGTGCGAGTTCCTCCAAAAATGAAACCTATTATTATCAAGTTCAGGCCCTTTCTGAGAACCTTTCTGAAGGAAGCCAGTGACTTTTTCGAAATTTATGCATATGCAAATGCTCCTCGATCTCTTGTGTGGAAAATTGTTGAGCTGCTCGATCCTAGAAATGAGTACTTCGGTCGTAGAGTGATATCGCGTGAGAACTTTTGTAGCACCCACCGAGGAAAGAAGTCTCTTGATCTTGTGCTTGGCCAAAAGTCTGCTGTTTTGGTGGTTGATGATGAAGAAGACGGATGGCAGGAGAAAAATCGAAATAATGTAATGCTACTGGGACAGTATTGTTTCTTCAAAAAGACGAGTGGCAAGAAGAGAAAACGGAAGTCCCTTTGTGAGTTGAAATCTGATGAACGGGCTGCTTCTCTTGCATCTCTTCTTAAACAGCTTAAGCGAATACACAACAGGTTCTTTAATGATGAAATAATGTGTGACAACCTTTTCGACAGAGATGTGAGGGTGCTGTTAAAAGTTGAGTGGGACTCTAATATTGACGATAGCCTTCAGTTTTGGAGGAAGGCAGTATCAAATTGTATGCGAAAAAAAATTGTGGCGTCCTTTAATTATCAACCGAAGAATCTGGCGGAGCAGTCATCCAGAGCTACTTGTGTTGAGGAACAAGTGGATGATCCATCGTCATTGGAGGTTGCAGAAGCAGCTCATGTTGGAAAGTCACCTGCTCGTTCGTTCCATCTGAGTTGGATTGACATATCAATCCGTTTGTGGCAGAAGAGTAATGTAGAAAAGAACCCAGTTATGATTGAGGATAGCGAATTTACCTGCAGCTCATGTGGTTGCAGCTCATATGTGAACACCCCGGAATCCCTTTGTCGATCCCTTTATAGCAGAGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0001101 GO:0003674 GO:0003824 GO:0004888 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006873 GO:0006875 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008281 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009987 GO:0010033 GO:0010118 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019725 GO:0022804 GO:0022857 GO:0023052 GO:0030003 GO:0030004 GO:0030007 GO:0031090 GO:0032870 GO:0033993 GO:0038023 GO:0042221 GO:0042592 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055082 GO:0055085 GO:0060089 GO:0065007 GO:0065008 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0097305 GO:0097306 GO:0098588 GO:0098771 GO:0098805 GO:1901527 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

687

Amino Acids

79.52

Weight (kDa)

7.11

Isoelectric Point (pI)

45.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NIF	PF03031	8 - 176	1.1e-18	NLI interacting factor-like phosphatase
NIF	PF03031	351 - 498	1.3e-17	NLI interacting factor-like phosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0017829)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr7g0213701
rosa_laevigata	RLG00000006914
rosa_multiflora	Rmu_co8420433.1_g000001 Rmu_sc0007885.1_g000001
rosa_roxburghii	Rroxscaffold_3G00244840 Rroxscaffold_6G00423320 Rroxscaffold_7G00183790
rosa_rugosa	Rorug03G0123500
rosa_samantha	Rh2CG327200 Rh4CG331800 Rh4DG103900 Rh5BG175500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1894
Acc36I	ACCTGC	3 cut(s)	772, 1894, 1997
AccI	GTMKAC	1 cut(s)	401
AccII	CGCG	3 cut(s)	62, 337, 1351
AciI	CCGC	1 cut(s)	1793
AclWI	GGATC	9 cut(s)	63, 126, 293, 406, 729, 1077, 1307, 1832, 2037
AcoI	YGGCCR	1 cut(s)	1405
AcsI	RAATTY	3 cut(s)	240, 1254, 1982
AcuI	CTGAAG	4 cut(s)	105, 236, 1250, 1697
AcyI	GRCGYC	1 cut(s)	1763
AfaI	GTAC	4 cut(s)	30, 314, 465, 1328
AflII	CTTAAG	2 cut(s)	581, 1598
AflIII	ACRYGT	1 cut(s)	231
AgsI	TTSAA	9 cut(s)	187, 239, 520, 538, 575, 638, 661, 1504, 1552
AjnI	CCWGG	2 cut(s)	24, 1053
AleI	CACNNNNGTG	1 cut(s)	737
Alw26I	GTCTC	3 cut(s)	425, 1392, 2052
AlwI	GGATC	9 cut(s)	63, 126, 293, 406, 729, 1077, 1307, 1832, 2037
AlwNI	CAGNNNCTG	1 cut(s)	682
AoxI	GGCC	3 cut(s)	194, 1208, 1405
ApeKI	GCWGC	7 cut(s)	597, 873, 1306, 1568, 1865, 1992, 2007
ApoI	RAATTY	3 cut(s)	240, 1254, 1982
ArsI	GACNNNNNNTTYG	2 cut(s)	1634, 1666
AseI	ATTAAT	1 cut(s)	1062
AspLEI	GCGC	1 cut(s)	64
AspS9I	GGNCC	3 cut(s)	195, 1135, 1209
AsuC2I	CCSGG	1 cut(s)	2027
AsuHPI	GGTGA	1 cut(s)	1875
AsuII	TTCGAA	1 cut(s)	1251
AvaII	GGWCC	1 cut(s)	1135
BalI	TGGCCA	1 cut(s)	1407
BanII	GRGCYC	2 cut(s)	751, 972
BarI	GAAGNNNNNNTAC	2 cut(s)	1484, 1516
BauI	CACGAG	1 cut(s)	962
BbsI	GAAGAC	1 cut(s)	1449
BbvI	GCAGC	7 cut(s)	609, 885, 1293, 1555, 1877, 2004, 2019
BccI	CCATC	5 cut(s)	109, 820, 1443, 1849, 1908
BcgI	CGANNNNNNTGC	2 cut(s)	1241, 1275
BciT130I	CCWGG	2 cut(s)	26, 1055
BclI	TGATCA	3 cut(s)	418, 610, 853
BcnI	CCSGG	1 cut(s)	2027
BcoDI	GTCTC	3 cut(s)	425, 1392, 2052
BfaI	CTAG	4 cut(s)	38, 1034, 1317, 2062
BfmI	CTRYAG	1 cut(s)	1990
BfrI	CTTAAG	2 cut(s)	581, 1598
BfuAI	ACCTGC	3 cut(s)	772, 1894, 1997
BisI	GCNGC	7 cut(s)	598, 874, 1307, 1569, 1866, 1993, 2008
BlsI	GCNGC	7 cut(s)	599, 875, 1308, 1570, 1867, 1994, 2009
BmcAI	AGTACT	3 cut(s)	314, 465, 1328
Bme1390I	CCNGG	3 cut(s)	26, 1055, 2027
Bme18I	GGWCC	1 cut(s)	1135
BmgT120I	GGNCC	3 cut(s)	195, 1135, 1209
BmrFI	CCNGG	3 cut(s)	26, 1055, 2027
BmrI	ACTGGG	2 cut(s)	1493, 1955
BmsI	GCATC	1 cut(s)	1589
BmuI	ACTGGG	2 cut(s)	1493, 1955
BpiI	GAAGAC	1 cut(s)	1449
BplI	GAGNNNNNCTC	2 cut(s)	1676, 1708
Bpu10I	CCTNAGC	1 cut(s)	191
Bpu14I	TTCGAA	1 cut(s)	1251
BpuMI	CCSGG	1 cut(s)	2027
BsaHI	GRCGYC	1 cut(s)	1763
BsaJI	CCNNGG	2 cut(s)	1375, 2025
Bse1I	ACTGG	4 cut(s)	225, 1239, 1488, 1961
Bse3DI	GCAATG	1 cut(s)	773
BseBI	CCWGG	2 cut(s)	26, 1055
BseDI	CCNNGG	2 cut(s)	1375, 2025
BseGI	GGATG	5 cut(s)	121, 567, 1454, 1802, 1840
BseMI	GCAATG	1 cut(s)	773
BseMII	CTCAG	5 cut(s)	82, 1073, 1111, 1208, 1895
BseNI	ACTGG	4 cut(s)	225, 1239, 1488, 1961
BseRI	GAGGAG	1 cut(s)	1266
BseXI	GCAGC	7 cut(s)	609, 885, 1293, 1555, 1877, 2004, 2019
BseYI	CCCAGC	1 cut(s)	743
Bsh1236I	CGCG	3 cut(s)	62, 337, 1351
Bsh1285I	CGRYCG	1 cut(s)	1336
BshFI	GGCC	3 cut(s)	196, 1210, 1407
BsiEI	CGRYCG	1 cut(s)	1336
BsiSI	CCGG	1 cut(s)	2027
BslFI	GGGAC	5 cut(s)	147, 508, 1500, 1522, 1703
BsmAI	GTCTC	3 cut(s)	425, 1392, 2052
BsmFI	GGGAC	5 cut(s)	147, 508, 1500, 1522, 1703
BsnI	GGCC	3 cut(s)	196, 1210, 1407
Bsp119I	TTCGAA	1 cut(s)	1251
Bsp1286I	GDGCHC	2 cut(s)	751, 972
BspACI	CCGC	1 cut(s)	1793
BspANI	GGCC	3 cut(s)	196, 1210, 1407
BspCNI	CTCAG	5 cut(s)	81, 1074, 1110, 1209, 1896
BspFNI	CGCG	3 cut(s)	62, 337, 1351
BspMAI	CTGCAG	1 cut(s)	1994
BspMI	ACCTGC	3 cut(s)	772, 1894, 1997
BspPI	GGATC	9 cut(s)	63, 126, 293, 406, 729, 1077, 1307, 1832, 2037
BspT104I	TTCGAA	1 cut(s)	1251
BspTI	CTTAAG	2 cut(s)	581, 1598
BsrDI	GCAATG	1 cut(s)	773
BsrI	ACTGG	4 cut(s)	225, 1239, 1488, 1961
BssECI	CCNNGG	2 cut(s)	1375, 2025
BssNI	GRCGYC	1 cut(s)	1763
BssSI	CACGAG	1 cut(s)	962
Bst2BI	CACGAG	1 cut(s)	962
Bst2UI	CCWGG	2 cut(s)	26, 1055
Bst4CI	ACNGT	6 cut(s)	406, 512, 953, 1004, 1165, 1491
Bst6I	CTCTTC	3 cut(s)	1517, 1590, 1934
BstACI	GRCGYC	1 cut(s)	1763
BstAFI	CTTAAG	2 cut(s)	581, 1598
BstBI	TTCGAA	1 cut(s)	1251
BstC8I	GCNNGC	3 cut(s)	390, 684, 796
BstDEI	CTNAG	7 cut(s)	68, 191, 983, 1082, 1097, 1217, 1904
BstF5I	GGATG	5 cut(s)	121, 567, 1454, 1802, 1840
BstFNI	CGCG	3 cut(s)	62, 337, 1351
BstHHI	GCGC	1 cut(s)	64
BstMAI	GTCTC	3 cut(s)	425, 1392, 2052
BstMCI	CGRYCG	1 cut(s)	1336
BstMWI	GCNNNNNNNGC	6 cut(s)	560, 679, 688, 938, 1577, 1865
BstNI	CCWGG	2 cut(s)	26, 1055
BstNSI	RCATGY	1 cut(s)	235
BstSCI	CCNGG	3 cut(s)	24, 1053, 2025
BstSFI	CTRYAG	1 cut(s)	1990
BstUI	CGCG	3 cut(s)	62, 337, 1351
BstV1I	GCAGC	7 cut(s)	609, 885, 1293, 1555, 1877, 2004, 2019
BstV2I	GAAGAC	1 cut(s)	1449
BstX2I	RGATCY	1 cut(s)	721
BstXI	CCANNNNNNTGG	1 cut(s)	739
BstYI	RGATCY	1 cut(s)	721
BsuRI	GGCC	3 cut(s)	196, 1210, 1407
BtsCI	GGATG	5 cut(s)	121, 567, 1454, 1802, 1840
BtsIMutI	CAGTG	6 cut(s)	76, 232, 517, 1105, 1170, 1246
BveI	ACCTGC	3 cut(s)	772, 1894, 1997
Cac8I	GCNNGC	3 cut(s)	390, 684, 796
CaiI	CAGNNNCTG	1 cut(s)	682
CfoI	GCGC	1 cut(s)	64
Cfr13I	GGNCC	3 cut(s)	195, 1135, 1209
CseI	GACGC	1 cut(s)	1752
CsiI	ACCWGGT	2 cut(s)	24, 1053
Csp6I	GTAC	4 cut(s)	29, 313, 464, 1327
CviAII	CATG	5 cut(s)	232, 435, 857, 1871, 1998
CviQI	GTAC	4 cut(s)	29, 313, 464, 1327
DdeI	CTNAG	7 cut(s)	68, 191, 983, 1082, 1097, 1217, 1904
DraI	TTTAAA	2 cut(s)	490, 1131
EaeI	YGGCCR	1 cut(s)	1405
Eam1104I	CTCTTC	3 cut(s)	1517, 1590, 1934
EarI	CTCTTC	3 cut(s)	1517, 1590, 1934
EciI	GGCGGA	1 cut(s)	1808
Eco24I	GRGCYC	2 cut(s)	751, 972
Eco32I	GATATC	3 cut(s)	269, 333, 1347
Eco47I	GGWCC	1 cut(s)	1135
Eco57I	CTGAAG	4 cut(s)	105, 236, 1250, 1697
EcoO109I	RGGNCCY	2 cut(s)	195, 1209
EcoRII	CCWGG	2 cut(s)	24, 1053
EcoRV	GATATC	3 cut(s)	269, 333, 1347
EcoT22I	ATGCAT	2 cut(s)	250, 1264
EcoT38I	GRGCYC	2 cut(s)	751, 972
FaeI	CATG	5 cut(s)	235, 438, 860, 1874, 2001
FaqI	GGGAC	5 cut(s)	147, 508, 1500, 1522, 1703
FatI	CATG	5 cut(s)	231, 434, 856, 1870, 1997
FauNDI	CATATG	2 cut(s)	1264, 2014
FbaI	TGATCA	3 cut(s)	418, 610, 853
FblI	GTMKAC	1 cut(s)	401
Fnu4HI	GCNGC	7 cut(s)	598, 874, 1307, 1569, 1866, 1993, 2008
FokI	GGATG	5 cut(s)	108, 554, 1461, 1789, 1847
FriOI	GRGCYC	2 cut(s)	751, 972
Fsp4HI	GCNGC	7 cut(s)	598, 874, 1307, 1569, 1866, 1993, 2008
FspBI	CTAG	4 cut(s)	38, 1034, 1317, 2062
GlaI	GCGC	1 cut(s)	63
GluI	GCNGC	7 cut(s)	598, 874, 1307, 1569, 1866, 1993, 2008
GsaI	CCCAGC	1 cut(s)	747
HaeIII	GGCC	3 cut(s)	196, 1210, 1407
HapII	CCGG	1 cut(s)	2027
HgaI	GACGC	1 cut(s)	1752
HhaI	GCGC	1 cut(s)	64
Hin1I	GRCGYC	1 cut(s)	1763
Hin1II	CATG	5 cut(s)	235, 438, 860, 1874, 2001
Hin6I	GCGC	1 cut(s)	62
HinP1I	GCGC	1 cut(s)	62
HindIII	AAGCTT	1 cut(s)	188
HinfI	GANTC	6 cut(s)	398, 1084, 1145, 1691, 1786, 2030
HpaII	CCGG	1 cut(s)	2027
HphI	GGTGA	1 cut(s)	1875
Hpy166II	GTNNAC	4 cut(s)	402, 503, 1039, 2020
Hpy188I	TCNGA	9 cut(s)	78, 216, 411, 1083, 1107, 1218, 1230, 1558, 1905
Hpy188III	TCNNGA	7 cut(s)	38, 264, 377, 887, 1067, 1391, 1806
Hpy8I	GTNNAC	4 cut(s)	402, 503, 1039, 2020
HpyAV	CCTTC	7 cut(s)	211, 489, 581, 646, 1225, 1720, 1721
HpyCH4III	ACNGT	6 cut(s)	406, 512, 953, 1004, 1165, 1491
HpyCH4IV	ACGT	1 cut(s)	753
HpyF10VI	GCNNNNNNNGC	6 cut(s)	560, 679, 688, 938, 1577, 1865
HpyF3I	CTNAG	7 cut(s)	68, 191, 983, 1082, 1097, 1217, 1904
HpySE526I	ACGT	1 cut(s)	753
Hsp92I	GRCGYC	1 cut(s)	1763
Hsp92II	CATG	5 cut(s)	235, 438, 860, 1874, 2001
HspAI	GCGC	1 cut(s)	62
Ksp22I	TGATCA	3 cut(s)	418, 610, 853
LmnI	GCTCC	3 cut(s)	442, 1279, 1795
Lsp1109I	GCAGC	7 cut(s)	609, 885, 1293, 1555, 1877, 2004, 2019
LweI	GCATC	1 cut(s)	1589
MabI	ACCWGGT	2 cut(s)	24, 1053
MaeI	CTAG	4 cut(s)	38, 1034, 1317, 2062
MaeII	ACGT	1 cut(s)	753
MaeIII	GTNAC	7 cut(s)	227, 623, 839, 1085, 1241, 1640, 1881
MflI	RGATCY	1 cut(s)	721
MhlI	GDGCHC	2 cut(s)	751, 972
MlsI	TGGCCA	1 cut(s)	1407
MluNI	TGGCCA	1 cut(s)	1407
MlyI	GAGTC	3 cut(s)	407, 1093, 1685
MmeI	TCCRAC	3 cut(s)	736, 1855, 1889
Mox20I	TGGCCA	1 cut(s)	1407
Mph1103I	ATGCAT	2 cut(s)	250, 1264
MscI	TGGCCA	1 cut(s)	1407
MslI	CAYNNNNRTG	1 cut(s)	737
Msp20I	TGGCCA	1 cut(s)	1407
MspCI	CTTAAG	2 cut(s)	581, 1598
MspI	CCGG	1 cut(s)	2027
MspR9I	CCNGG	3 cut(s)	26, 1055, 2027
MvaI	CCWGG	2 cut(s)	26, 1055
MvnI	CGCG	3 cut(s)	62, 337, 1351
MwoI	GCNNNNNNNGC	6 cut(s)	560, 679, 688, 938, 1577, 1865
NciI	CCSGG	1 cut(s)	2027
NdeI	CATATG	2 cut(s)	1264, 2014
NlaIII	CATG	5 cut(s)	235, 438, 860, 1874, 2001
NmuCI	GTSAC	6 cut(s)	227, 623, 1085, 1241, 1640, 1881
NsiI	ATGCAT	2 cut(s)	250, 1264
NspI	RCATGY	1 cut(s)	235
NspV	TTCGAA	1 cut(s)	1251
OliI	CACNNNNGTG	1 cut(s)	737
PaqCI	CACCTGC	1 cut(s)	1894
PciI	ACATGT	1 cut(s)	231
PfeI	GAWTC	3 cut(s)	1145, 1786, 2030
PkrI	GCNGC	7 cut(s)	599, 875, 1308, 1570, 1867, 1994, 2009
PleI	GAGTC	3 cut(s)	406, 1092, 1685
PpsI	GAGTC	3 cut(s)	406, 1092, 1685
PscI	ACATGT	1 cut(s)	231
PshBI	ATTAAT	1 cut(s)	1062
Psp6I	CCWGG	2 cut(s)	24, 1053
PspFI	CCCAGC	1 cut(s)	743
PspGI	CCWGG	2 cut(s)	24, 1053
PspPI	GGNCC	3 cut(s)	195, 1135, 1209
PstI	CTGCAG	1 cut(s)	1994
PstNI	CAGNNNCTG	1 cut(s)	682
PsuI	RGATCY	1 cut(s)	721
RsaI	GTAC	4 cut(s)	30, 314, 465, 1328
RsaNI	GTAC	4 cut(s)	29, 313, 464, 1327
RseI	CAYNNNNRTG	1 cut(s)	737
SatI	GCNGC	7 cut(s)	598, 874, 1307, 1569, 1866, 1993, 2008
Sau96I	GGNCC	3 cut(s)	195, 1135, 1209
ScaI	AGTACT	3 cut(s)	314, 465, 1328
SchI	GAGTC	3 cut(s)	407, 1093, 1685
ScrFI	CCNGG	3 cut(s)	26, 1055, 2027
SduI	GDGCHC	2 cut(s)	751, 972
SexAI	ACCWGGT	2 cut(s)	24, 1053
SfaNI	GCATC	1 cut(s)	1589
SfcI	CTRYAG	1 cut(s)	1990
SfuI	TTCGAA	1 cut(s)	1251
SinI	GGWCC	1 cut(s)	1135
SmiMI	CAYNNNNRTG	1 cut(s)	737
SmlI	CTYRAG	2 cut(s)	581, 1598
SmoI	CTYRAG	2 cut(s)	581, 1598
SsiI	CCGC	1 cut(s)	1793
SspI	AATATT	2 cut(s)	1127, 1699
SspMI	CTAG	4 cut(s)	38, 1034, 1317, 2062
StyD4I	CCNGG	3 cut(s)	24, 1053, 2025
TaaI	ACNGT	6 cut(s)	406, 512, 953, 1004, 1165, 1491
TaiI	ACGT	1 cut(s)	756
TaqI	TCGA	9 cut(s)	265, 297, 728, 1251, 1279, 1311, 1465, 1653, 2041
TaqII	GACCGA	1 cut(s)	1322
TatI	WGTACW	3 cut(s)	312, 463, 1326
TfiI	GAWTC	3 cut(s)	1145, 1786, 2030
TscAI	CASTG	6 cut(s)	76, 232, 517, 1105, 1170, 1246
TseFI	GTSAC	6 cut(s)	227, 623, 1085, 1241, 1640, 1881
TseI	GCWGC	7 cut(s)	597, 873, 1306, 1568, 1865, 1992, 2007
Tsp45I	GTSAC	6 cut(s)	227, 623, 1085, 1241, 1640, 1881
TspDTI	ATGAA	8 cut(s)	185, 337, 726, 762, 1199, 1452, 1575, 1644
TspGWI	ACGGA	4 cut(s)	455, 1461, 1546, 1916
TspRI	CASTG	6 cut(s)	76, 232, 517, 1105, 1170, 1246
Vha464I	CTTAAG	2 cut(s)	581, 1598
VpaK11BI	GGWCC	1 cut(s)	1135
VspI	ATTAAT	1 cut(s)	1062
XapI	RAATTY	3 cut(s)	240, 1254, 1982
XbaI	TCTAGA	1 cut(s)	37
XceI	RCATGY	1 cut(s)	235
XmiI	GTMKAC	1 cut(s)	401
XspI	CTAG	4 cut(s)	38, 1034, 1317, 2062
ZrmI	AGTACT	3 cut(s)	314, 465, 1328
Zsp2I	ATGCAT	2 cut(s)	250, 1264

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.