Rh4DG103900

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Forward (+)
15953754 .. 15955686
1933 bp
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UTR
Exon/CDS
Intron
Rh4DG103900.1

Sequence Viewer

Length: 177 bp
ATGCTTAGGAGTGTTTTCAGCGCACCAATGTCTTTCTTTGATTCTACTCCTGCTGGACGGATTTTGAATCCAAGAGATGCAAGAGGAAGCTGCTGTTCTGTGTGTTACCAGATTAAAGGCCAAATAAAGGAGGTCTTTGTGGTGCTGCACTGCCAAATTAGTCCAGATTTTATGTGA

Protein Analysis

58

Amino Acids

6.49

Weight (kDa)

8.49

Isoelectric Point (pI)

44.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfiI CCNNNNNNNGG 1 cut(s) 127
AgsI TTSAA 1 cut(s) 67
AluBI AGCT 1 cut(s) 90
AluI AGCT 1 cut(s) 90
AoxI GGCC 1 cut(s) 118
ApeKI GCWGC 2 cut(s) 90, 145
AspLEI GCGC 1 cut(s) 23
BbvI GCAGC 2 cut(s) 77, 132
BisI GCNGC 2 cut(s) 91, 146
BlsI GCNGC 2 cut(s) 92, 147
BmsI GCATC 1 cut(s) 67
Bpu10I CCTNAGC 1 cut(s) 5
Bsc4I CCNNNNNNNGG 1 cut(s) 127
BseLI CCNNNNNNNGG 1 cut(s) 127
BseXI GCAGC 2 cut(s) 77, 132
BsgI GTGCAG 1 cut(s) 131
BshFI GGCC 1 cut(s) 120
BslI CCNNNNNNNGG 1 cut(s) 127
BsnI GGCC 1 cut(s) 120
BspANI GGCC 1 cut(s) 120
BstDEI CTNAG 1 cut(s) 5
BstHHI GCGC 1 cut(s) 23
BstV1I GCAGC 2 cut(s) 77, 132
BsuRI GGCC 1 cut(s) 120
BtsI GCAGTG 1 cut(s) 148
BtsIMutI CAGTG 1 cut(s) 148
CfoI GCGC 1 cut(s) 23
CviJI RGCY 2 cut(s) 90, 120
CviKI_1 RGCY 2 cut(s) 90, 120
DdeI CTNAG 1 cut(s) 5
FaiI YATR 1 cut(s) 173
FalI AAGNNNNNCTT 2 cut(s) 119, 151
Fnu4HI GCNGC 2 cut(s) 91, 146
Fsp4HI GCNGC 2 cut(s) 91, 146
GlaI GCGC 1 cut(s) 22
GluI GCNGC 2 cut(s) 91, 146
HaeIII GGCC 1 cut(s) 120
HhaI GCGC 1 cut(s) 23
Hin6I GCGC 1 cut(s) 21
HinP1I GCGC 1 cut(s) 21
HinfI GANTC 2 cut(s) 41, 67
Hpy188III TCNNGA 1 cut(s) 164
HpyCH4V TGCA 2 cut(s) 80, 148
HpyF3I CTNAG 1 cut(s) 5
HspAI GCGC 1 cut(s) 21
LpnPI CCDG 3 cut(s) 39, 63, 122
Lsp1109I GCAGC 2 cut(s) 77, 132
LweI GCATC 1 cut(s) 67
MaeIII GTNAC 1 cut(s) 104
MluCI AATT 1 cut(s) 156
MnlI CCTC 2 cut(s) 77, 124
MseI TTAA 1 cut(s) 114
PfeI GAWTC 2 cut(s) 41, 67
PkrI GCNGC 2 cut(s) 92, 147
SaqAI TTAA 1 cut(s) 114
SatI GCNGC 2 cut(s) 91, 146
SetI ASST 2 cut(s) 92, 135
SfaNI GCATC 1 cut(s) 67
SgeI CNNG 5 cut(s) 62, 66, 84, 93, 121
Sse9I AATT 1 cut(s) 156
TasI AATT 1 cut(s) 156
TfiI GAWTC 2 cut(s) 41, 67
Tru1I TTAA 1 cut(s) 114
Tru9I TTAA 1 cut(s) 114
TscAI CASTG 1 cut(s) 155
TseI GCWGC 2 cut(s) 90, 145
TspGWI ACGGA 1 cut(s) 73
TspRI CASTG 1 cut(s) 155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.