RLG00000008891

ABC transporter B family member 29

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
41982703 .. 41985464
2762 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000008891

Sequence Viewer

Length: 486 bp
ATGGTGGTTATTGCTTTCGGGTGGAATATCGATTATGGTGGCGAAGATAGTGGTCATCAGCCCTATTTTATCTGGGATTTCAGCTGCGTGAGAAACTCACCAACGACATCTAACAAAGCCCAGCTCAGCACTGCTGCGCTGTCTGCTTATCTGAATGAGGTCCTCCCTGCAATTCTATTTGTGAAAGCAAGCAATGCAGAGTTGGGGGAGAATATAGGTTTAAGAAGCTTGCTTACACTGACCTCTGCGACCAATTTGAAAAAGAAGAAAATGAAGGCACTTTTTCCTCAGGTCACACATATTATATATTTTGGAAGGCTTTCTATGCTGTGTGTTGCTCCAATGGTGTTATGTAGTAGTTCAATCGATATCTTTGGCATAGTTAATCCAATTCAGGTATTTGAGATTTTTAAATCCACTAAGCTTTACTATATGTTCTTGAAGATACAATGCTCTAGAGAGGAGAGAAGCTTGCAAGGGCGGTAA

Protein Analysis

162

Amino Acids

18.03

Weight (kDa)

9.1

Isoelectric Point (pI)

48.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 481
AgsI TTSAA 3 cut(s) 259, 363, 442
AluBI AGCT 5 cut(s) 84, 124, 228, 424, 471
AluI AGCT 5 cut(s) 84, 124, 228, 424, 471
ApeKI GCWGC 2 cut(s) 84, 134
Asp700I GAANNNNTTC 1 cut(s) 319
AspLEI GCGC 1 cut(s) 139
AspS9I GGNCC 1 cut(s) 160
AsuHPI GGTGA 1 cut(s) 90
AvaII GGWCC 1 cut(s) 160
AxyI CCTNAGG 1 cut(s) 288
BarI GAAGNNNNNNTAC 2 cut(s) 217, 249
BbvI GCAGC 2 cut(s) 71, 121
BfaI CTAG 1 cut(s) 456
BisI GCNGC 2 cut(s) 85, 135
BlpI GCTNAGC 1 cut(s) 125
BlsI GCNGC 2 cut(s) 86, 136
Bme18I GGWCC 1 cut(s) 160
BmgT120I GGNCC 1 cut(s) 160
Bpu1102I GCTNAGC 1 cut(s) 125
Bsa29I ATCGAT 2 cut(s) 30, 366
Bse21I CCTNAGG 1 cut(s) 288
Bse3DI GCAATG 1 cut(s) 199
BseCI ATCGAT 2 cut(s) 30, 366
BseMI GCAATG 1 cut(s) 199
BseMII CTCAG 2 cut(s) 139, 302
BseRI GAGGAG 1 cut(s) 476
BseXI GCAGC 2 cut(s) 71, 121
BseYI CCCAGC 1 cut(s) 120
BshVI ATCGAT 2 cut(s) 30, 366
Bsp1720I GCTNAGC 1 cut(s) 125
BspACI CCGC 1 cut(s) 481
BspCNI CTCAG 2 cut(s) 138, 301
BspDI ATCGAT 2 cut(s) 30, 366
BsrDI GCAATG 1 cut(s) 199
BstAPI GCANNNNNTGC 1 cut(s) 194
BstC8I GCNNGC 3 cut(s) 190, 230, 473
BstDEI CTNAG 3 cut(s) 125, 288, 420
BstHHI GCGC 1 cut(s) 139
BstMWI GCNNNNNNNGC 3 cut(s) 143, 194, 325
BstV1I GCAGC 2 cut(s) 71, 121
Bsu15I ATCGAT 2 cut(s) 30, 366
Bsu36I CCTNAGG 1 cut(s) 288
BsuTUI ATCGAT 2 cut(s) 30, 366
BtsI GCAGTG 1 cut(s) 129
BtsIMutI CAGTG 2 cut(s) 129, 236
Cac8I GCNNGC 3 cut(s) 190, 230, 473
CfoI GCGC 1 cut(s) 139
Cfr13I GGNCC 1 cut(s) 160
ClaI ATCGAT 2 cut(s) 30, 366
CviJI RGCY 8 cut(s) 61, 84, 119, 124, 228, 319, 424, 471
CviKI_1 RGCY 8 cut(s) 61, 84, 119, 124, 228, 319, 424, 471
DdeI CTNAG 3 cut(s) 125, 288, 420
DraI TTTAAA 1 cut(s) 412
Eco32I GATATC 1 cut(s) 370
Eco47I GGWCC 1 cut(s) 160
Eco81I CCTNAGG 1 cut(s) 288
EcoO109I RGGNCCY 1 cut(s) 160
EcoRV GATATC 1 cut(s) 370
Fnu4HI GCNGC 2 cut(s) 85, 135
Fsp4HI GCNGC 2 cut(s) 85, 135
FspBI CTAG 1 cut(s) 456
GlaI GCGC 1 cut(s) 138
GluI GCNGC 2 cut(s) 85, 135
GsaI CCCAGC 1 cut(s) 124
HhaI GCGC 1 cut(s) 139
Hin6I GCGC 1 cut(s) 137
HinP1I GCGC 1 cut(s) 137
HindIII AAGCTT 3 cut(s) 226, 422, 469
HphI GGTGA 1 cut(s) 90
Hpy188I TCNGA 1 cut(s) 153
Hpy188III TCNNGA 2 cut(s) 439, 456
HpyAV CCTTC 2 cut(s) 268, 309
HpyCH4V TGCA 3 cut(s) 170, 197, 475
HpyF10VI GCNNNNNNNGC 3 cut(s) 143, 194, 325
HpyF3I CTNAG 3 cut(s) 125, 288, 420
HspAI GCGC 1 cut(s) 137
LmnI GCTCC 1 cut(s) 343
LpnPI CCDG 5 cut(s) 58, 134, 180, 275, 380
Lsp1109I GCAGC 2 cut(s) 71, 121
MaeI CTAG 1 cut(s) 456
MaeIII GTNAC 1 cut(s) 292
MboII GAAGA 3 cut(s) 56, 277, 454
MluCI AATT 3 cut(s) 171, 253, 390
MnlI CCTC 5 cut(s) 151, 173, 253, 297, 454
MroXI GAANNNNTTC 1 cut(s) 319
MseI TTAA 3 cut(s) 221, 384, 411
MspA1I CMGCKG 1 cut(s) 84
MwoI GCNNNNNNNGC 3 cut(s) 143, 194, 325
NmuCI GTSAC 1 cut(s) 292
PdmI GAANNNNTTC 1 cut(s) 319
PkrI GCNGC 2 cut(s) 86, 136
PpuMI RGGWCCY 1 cut(s) 160
Psp5II RGGWCCY 1 cut(s) 160
PspFI CCCAGC 1 cut(s) 120
PspPI GGNCC 1 cut(s) 160
PspPPI RGGWCCY 1 cut(s) 160
PvuII CAGCTG 1 cut(s) 84
SaqAI TTAA 3 cut(s) 221, 384, 411
SatI GCNGC 2 cut(s) 85, 135
Sau96I GGNCC 1 cut(s) 160
SinI GGWCC 1 cut(s) 160
Sse9I AATT 3 cut(s) 171, 253, 390
SsiI CCGC 1 cut(s) 481
SspMI CTAG 1 cut(s) 456
TaqI TCGA 2 cut(s) 30, 366
TasI AATT 3 cut(s) 171, 253, 390
Tru1I TTAA 3 cut(s) 221, 384, 411
Tru9I TTAA 3 cut(s) 221, 384, 411
TscAI CASTG 2 cut(s) 136, 243
TseFI GTSAC 1 cut(s) 292
TseI GCWGC 2 cut(s) 84, 134
Tsp45I GTSAC 1 cut(s) 292
TspDTI ATGAA 1 cut(s) 287
TspRI CASTG 2 cut(s) 136, 243
VpaK11BI GGWCC 1 cut(s) 160
XbaI TCTAGA 1 cut(s) 455
XmnI GAANNNNTTC 1 cut(s) 319
XspI CTAG 1 cut(s) 456
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.