RLG00000009915

Targeting protein for Xklp2 (TPX2)

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
60119894 .. 60121925
2032 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009915

Sequence Viewer

Length: 1200 bp
ATGGCAATAGAAGTTACAGATATTTGCATGGACAAGGAGTCAGATGGTGCCATAATTTATTCAGATGCTTCTCATGACTCAAATCGTGAAAGAATTCCCAATGATCATGCAATTTCAGAGTCATATGAGGAGACCCAAAATTTGCAAGAGAGCACTGAAGTAAAGGATTATGAAGTAAAGGAATGCACTACAGAAACCTCTATTGACATTTCTCAATTGAGTCAGATTGAAAATGCTATTGAAGATCAGAATGTGGTAAGCTCGAAGCCTGATAATGGCAAGCCTGTGGAGAAGGTTCAGCGGGATTCTGAGAAAACAAAGGATGGAAATAAGTCACGCTCATCTGTTAATCAAGCATCAAAACCTTCTGCGGGAAATGGTAGAACAAAACACACTGTTCCACGGCCATTTACCTTAGCAACTGAAAAGCGTGCTTCATATGGAGCTCGTCCAGTCAGTGCTGTACTTGATTGCGGTAATGGCATCAATAAATCACCCAACTCGAGCAATCTGCGACATCTTAATACCACAAAGCATACCCAGCCAAGATCACCTTTGGTACCAAGGAAGTCATTTCAACTTGATGGGAAGAAGCATCCTGATGATGAAGATACCTGTTCTGTTGCTTCCTCCACAGTAGCATCTGTACGAACTATTAGGTCCAGGACAACAGTGGCATCAGCTCCGACGTTTAGAAGTAATGAACGTGCAGAGAAAAGGAAGGAGTTTTATTCAAAATTAGAGGAGAAACATCACGCTCTTGAGGCTGAGAAAAATCAAAGTGAAGCAAGGACCAAGGAAGAGAAAGAGGCTGCTGTTAAGCAATTGAGAAAGAGTTTAATGTTCAAGGCAAACCCGATGCCAAGTTTCTACCATGATGGACCTCCAGCTAAGACTGAACTCAAAAAGCTGCCCCCAACTCGTGCAAAGTCACCAAAGCTTGGCCGAAGGAAGAGCTGCAGTGATACAGTCAAAGTATCCCAAGGAGACGGAATAAAAGGAGCTGCTGGTCCGGGAAATCGGCGCAGTATGGGTAGCTACAAAAAGGATGCTTCTGTGCAACATAAGGATCAGATTAACATTCAAAATGGCAATGCTGATTGCAAGTTTGTTGAAGAGCCTAAGAAAGTGGATGAGATAAGCAAGTTCATTCCAGCCAACCTAAATGAACAGCATATGGACATATTTGTTGAATCCTGA

Protein Analysis

400

Amino Acids

44.27

Weight (kDa)

8.88

Isoelectric Point (pI)

52.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPX2 PF06886 230 - 299 5.6e-26 Targeting protein for Xklp2 (TPX2) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 559
AccB1I GGYRCC 2 cut(s) 47, 559
AccB7I CCANNNNNTGG 1 cut(s) 941
AciI CCGC 3 cut(s) 301, 371, 474
AclWI GGATC 1 cut(s) 1077
AcoI YGGCCR 2 cut(s) 404, 943
AcsI RAATTY 2 cut(s) 93, 139
AcuI CTGAAG 1 cut(s) 177
AfaI GTAC 3 cut(s) 465, 561, 648
AfiI CCNNNNNNNGG 3 cut(s) 275, 371, 941
AgsI TTSAA 8 cut(s) 230, 242, 578, 735, 847, 1085, 1115, 1193
AhdI GACNNNNNGTC 1 cut(s) 37
AjnI CCWGG 1 cut(s) 662
AluBI AGCT 9 cut(s) 261, 446, 683, 890, 910, 940, 957, 1004, 1038
AluI AGCT 9 cut(s) 261, 446, 683, 890, 910, 940, 957, 1004, 1038
Alw21I GWGCWC 2 cut(s) 155, 448
Alw26I GTCTC 2 cut(s) 125, 981
AlwI GGATC 1 cut(s) 1077
Ama87I CYCGRG 1 cut(s) 502
AoxI GGCC 2 cut(s) 404, 943
ApeKI GCWGC 4 cut(s) 812, 910, 957, 1004
ApoI RAATTY 2 cut(s) 93, 139
ArsI GACNNNNNNTTYG 2 cut(s) 124, 156
Asp700I GAANNNNTTC 1 cut(s) 93
Asp718I GGTACC 1 cut(s) 559
AspLEI GCGC 1 cut(s) 1026
AspS9I GGNCC 4 cut(s) 660, 792, 881, 1010
AsuC2I CCSGG 1 cut(s) 1014
AsuHPI GGTGA 3 cut(s) 486, 543, 924
AvaI CYCGRG 1 cut(s) 502
AvaII GGWCC 4 cut(s) 660, 792, 881, 1010
BanI GGYRCC 2 cut(s) 47, 559
BanII GRGCYC 1 cut(s) 448
BauI CACGAG 1 cut(s) 921
Bbv12I GWGCWC 2 cut(s) 155, 448
BbvI GCAGC 4 cut(s) 799, 897, 944, 991
BccI CCATC 4 cut(s) 38, 317, 578, 872
BceAI ACGGC 1 cut(s) 419
BcgI CGANNNNNNTGC 2 cut(s) 493, 527
BciT130I CCWGG 1 cut(s) 664
BciVI GTATCC 1 cut(s) 988
BclI TGATCA 1 cut(s) 103
BcnI CCSGG 1 cut(s) 1014
BcoDI GTCTC 2 cut(s) 125, 981
BfmI CTRYAG 2 cut(s) 189, 958
BfuI GTATCC 1 cut(s) 988
BisI GCNGC 4 cut(s) 813, 911, 958, 1005
BlsI GCNGC 4 cut(s) 814, 912, 959, 1006
Bme1390I CCNGG 2 cut(s) 664, 1014
Bme18I GGWCC 4 cut(s) 660, 792, 881, 1010
BmeRI GACNNNNNGTC 1 cut(s) 37
BmeT110I CYCGRG 1 cut(s) 502
BmgT120I GGNCC 4 cut(s) 660, 792, 881, 1010
BmiI GGNNCC 2 cut(s) 49, 561
BmrFI CCNGG 2 cut(s) 664, 1014
BmsI GCATC 8 cut(s) 55, 365, 492, 604, 650, 686, 849, 1039
BpmI CTGGAG 1 cut(s) 870
Bpu10I CCTNAGC 1 cut(s) 415
BpuEI CTTGAG 1 cut(s) 782
BpuMI CCSGG 1 cut(s) 1014
BsaI GGTCTC 1 cut(s) 125
BsaJI CCNNGG 4 cut(s) 401, 563, 795, 982
Bsc4I CCNNNNNNNGG 3 cut(s) 275, 371, 941
Bse1I ACTGG 1 cut(s) 452
Bse3DI GCAATG 1 cut(s) 1099
BseBI CCWGG 1 cut(s) 664
BseDI CCNNGG 4 cut(s) 401, 563, 795, 982
BseGI GGATG 4 cut(s) 328, 595, 1054, 1138
BseLI CCNNNNNNNGG 3 cut(s) 275, 371, 941
BseMI GCAATG 1 cut(s) 1099
BseMII CTCAG 2 cut(s) 300, 759
BseNI ACTGG 1 cut(s) 452
BseRI GAGGAG 2 cut(s) 143, 758
BseXI GCAGC 4 cut(s) 799, 897, 944, 991
BseYI CCCAGC 1 cut(s) 540
BsgI GTGCAG 1 cut(s) 729
BshFI GGCC 2 cut(s) 406, 945
BshNI GGYRCC 2 cut(s) 47, 559
BsiHKAI GWGCWC 2 cut(s) 155, 448
BsiHKCI CYCGRG 1 cut(s) 502
BsiSI CCGG 1 cut(s) 1013
BslI CCNNNNNNNGG 3 cut(s) 275, 371, 941
BsmAI GTCTC 2 cut(s) 125, 981
BsmBI CGTCTC 1 cut(s) 981
BsmI GAATGC 1 cut(s) 188
BsnI GGCC 2 cut(s) 406, 945
Bso31I GGTCTC 1 cut(s) 125
BsoBI CYCGRG 1 cut(s) 502
Bsp1286I GDGCHC 2 cut(s) 155, 448
Bsp143I GATC 4 cut(s) 103, 244, 548, 1069
BspACI CCGC 3 cut(s) 301, 371, 474
BspANI GGCC 2 cut(s) 406, 945
BspCNI CTCAG 2 cut(s) 301, 760
BspHI TCATGA 1 cut(s) 73
BspLI GGNNCC 2 cut(s) 49, 561
BspMAI CTGCAG 1 cut(s) 962
BspPI GGATC 1 cut(s) 1077
BspQI GCTCTTC 2 cut(s) 947, 1110
BspT107I GGYRCC 2 cut(s) 47, 559
BspTNI GGTCTC 1 cut(s) 125
BsrDI GCAATG 1 cut(s) 1099
BsrI ACTGG 1 cut(s) 452
BssECI CCNNGG 4 cut(s) 401, 563, 795, 982
BssMI GATC 4 cut(s) 103, 244, 548, 1069
BssSI CACGAG 1 cut(s) 921
BssT1I CCWWGG 3 cut(s) 563, 795, 982
Bst2BI CACGAG 1 cut(s) 921
Bst2UI CCWGG 1 cut(s) 664
Bst4CI ACNGT 4 cut(s) 397, 637, 673, 970
Bst6I CTCTTC 3 cut(s) 795, 947, 1110
BstC8I GCNNGC 2 cut(s) 281, 432
BstDEI CTNAG 5 cut(s) 309, 415, 768, 891, 1122
BstDSI CCRYGG 1 cut(s) 401
BstF5I GGATG 4 cut(s) 328, 595, 1054, 1138
BstHHI GCGC 1 cut(s) 1026
BstKTI GATC 4 cut(s) 106, 247, 551, 1072
BstMAI GTCTC 2 cut(s) 125, 981
BstMBI GATC 4 cut(s) 103, 244, 548, 1069
BstMWI GCNNNNNNNGC 3 cut(s) 480, 541, 764
BstNI CCWGG 1 cut(s) 664
BstSCI CCNGG 2 cut(s) 662, 1012
BstSFI CTRYAG 2 cut(s) 189, 958
BstV1I GCAGC 4 cut(s) 799, 897, 944, 991
BsuI GTATCC 1 cut(s) 988
BsuRI GGCC 2 cut(s) 406, 945
BtgI CCRYGG 1 cut(s) 401
BtsCI GGATG 4 cut(s) 328, 595, 1054, 1138
BtsI GCAGTG 1 cut(s) 967
BtsIMutI CAGTG 5 cut(s) 153, 393, 463, 678, 967
Cac8I GCNNGC 2 cut(s) 281, 432
CciI TCATGA 1 cut(s) 73
CfoI GCGC 1 cut(s) 1026
Cfr13I GGNCC 4 cut(s) 660, 792, 881, 1010
Csp6I GTAC 3 cut(s) 464, 560, 647
CviAII CATG 4 cut(s) 28, 74, 107, 875
CviQI GTAC 3 cut(s) 464, 560, 647
DdeI CTNAG 5 cut(s) 309, 415, 768, 891, 1122
DpnI GATC 4 cut(s) 105, 246, 550, 1071
DpnII GATC 4 cut(s) 103, 244, 548, 1069
DriI GACNNNNNGTC 1 cut(s) 37
EaeI YGGCCR 2 cut(s) 404, 943
Eam1104I CTCTTC 3 cut(s) 795, 947, 1110
Eam1105I GACNNNNNGTC 1 cut(s) 37
EarI CTCTTC 3 cut(s) 795, 947, 1110
Ecl136II GAGCTC 1 cut(s) 446
Eco130I CCWWGG 3 cut(s) 563, 795, 982
Eco24I GRGCYC 1 cut(s) 448
Eco31I GGTCTC 1 cut(s) 125
Eco47I GGWCC 4 cut(s) 660, 792, 881, 1010
Eco53kI GAGCTC 1 cut(s) 446
Eco57I CTGAAG 1 cut(s) 177
Eco88I CYCGRG 1 cut(s) 502
EcoICRI GAGCTC 1 cut(s) 446
EcoRI GAATTC 1 cut(s) 93
EcoRII CCWGG 1 cut(s) 662
EcoT14I CCWWGG 3 cut(s) 563, 795, 982
EcoT38I GRGCYC 1 cut(s) 448
ErhI CCWWGG 3 cut(s) 563, 795, 982
Esp3I CGTCTC 1 cut(s) 981
FaeI CATG 4 cut(s) 31, 77, 110, 878
FalI AAGNNNNNCTT 2 cut(s) 538, 570
FatI CATG 4 cut(s) 27, 73, 106, 874
FauI CCCGC 2 cut(s) 294, 364
FauNDI CATATG 3 cut(s) 124, 439, 1176
FbaI TGATCA 1 cut(s) 103
Fnu4HI GCNGC 4 cut(s) 813, 911, 958, 1005
FokI GGATG 4 cut(s) 335, 582, 1061, 1145
FriOI GRGCYC 1 cut(s) 448
Fsp4HI GCNGC 4 cut(s) 813, 911, 958, 1005
GlaI GCGC 1 cut(s) 1025
GluI GCNGC 4 cut(s) 813, 911, 958, 1005
GsaI CCCAGC 1 cut(s) 544
GsuI CTGGAG 1 cut(s) 870
HaeIII GGCC 2 cut(s) 406, 945
HapII CCGG 1 cut(s) 1013
HhaI GCGC 1 cut(s) 1026
Hin1II CATG 4 cut(s) 31, 77, 110, 878
Hin6I GCGC 1 cut(s) 1024
HinP1I GCGC 1 cut(s) 1024
HindIII AAGCTT 1 cut(s) 938
HinfI GANTC 6 cut(s) 38, 77, 119, 220, 305, 1193
HpaII CCGG 1 cut(s) 1013
HphI GGTGA 3 cut(s) 486, 543, 924
Hpy188I TCNGA 8 cut(s) 43, 64, 118, 225, 249, 310, 687, 1074
Hpy188III TCNNGA 5 cut(s) 74, 86, 599, 761, 1197
Hpy99I CGWCG 1 cut(s) 691
HpyAV CCTTC 4 cut(s) 286, 375, 715, 942
HpyCH4III ACNGT 4 cut(s) 397, 637, 673, 970
HpyCH4IV ACGT 2 cut(s) 689, 706
HpyCH4V TGCA 9 cut(s) 27, 110, 145, 186, 710, 926, 960, 1060, 1104
HpyF10VI GCNNNNNNNGC 3 cut(s) 480, 541, 764
HpyF3I CTNAG 5 cut(s) 309, 415, 768, 891, 1122
HpySE526I ACGT 2 cut(s) 689, 706
Hsp92II CATG 4 cut(s) 31, 77, 110, 878
HspAI GCGC 1 cut(s) 1024
KpnI GGTACC 1 cut(s) 563
Ksp22I TGATCA 1 cut(s) 103
Kzo9I GATC 4 cut(s) 103, 244, 548, 1069
LguI GCTCTTC 2 cut(s) 947, 1110
LmnI GCTCC 3 cut(s) 443, 688, 1001
Lsp1109I GCAGC 4 cut(s) 799, 897, 944, 991
LweI GCATC 8 cut(s) 55, 365, 492, 604, 650, 686, 849, 1039
MaeII ACGT 2 cut(s) 689, 706
MaeIII GTNAC 3 cut(s) 13, 333, 930
MalI GATC 4 cut(s) 105, 246, 550, 1071
MboI GATC 4 cut(s) 103, 244, 548, 1069
MboII GAAGA 6 cut(s) 254, 601, 620, 812, 964, 1127
MfeI CAATTG 2 cut(s) 215, 824
MhlI GDGCHC 2 cut(s) 155, 448
MluCI AATT 7 cut(s) 54, 93, 111, 139, 215, 737, 824
MlyI GAGTC 4 cut(s) 47, 71, 128, 229
MmeI TCCRAC 1 cut(s) 710
MnlI CCTC 7 cut(s) 121, 208, 640, 736, 757, 802, 894
MroXI GAANNNNTTC 1 cut(s) 93
MseI TTAA 5 cut(s) 348, 522, 819, 839, 1077
MslI CAYNNNNRTG 1 cut(s) 600
MspA1I CMGCKG 1 cut(s) 301
MspI CCGG 1 cut(s) 1013
MspR9I CCNGG 2 cut(s) 664, 1014
MunI CAATTG 2 cut(s) 215, 824
Mva1269I GAATGC 1 cut(s) 188
MvaI CCWGG 1 cut(s) 664
MwoI GCNNNNNNNGC 3 cut(s) 480, 541, 764
NciI CCSGG 1 cut(s) 1014
NdeI CATATG 3 cut(s) 124, 439, 1176
NdeII GATC 4 cut(s) 103, 244, 548, 1069
NlaIII CATG 4 cut(s) 31, 77, 110, 878
NlaIV GGNNCC 2 cut(s) 49, 561
NmuCI GTSAC 2 cut(s) 333, 930
PaeR7I CTCGAG 1 cut(s) 502
PagI TCATGA 1 cut(s) 73
PciSI GCTCTTC 2 cut(s) 947, 1110
PctI GAATGC 1 cut(s) 188
PdmI GAANNNNTTC 1 cut(s) 93
PfeI GAWTC 2 cut(s) 305, 1193
PflMI CCANNNNNTGG 1 cut(s) 941
PfoI TCCNGGA 2 cut(s) 662, 1012
PkrI GCNGC 4 cut(s) 814, 912, 959, 1006
PleI GAGTC 4 cut(s) 46, 71, 127, 228
PpsI GAGTC 4 cut(s) 46, 71, 127, 228
Psp124BI GAGCTC 1 cut(s) 448
Psp6I CCWGG 1 cut(s) 662
PspFI CCCAGC 1 cut(s) 540
PspGI CCWGG 1 cut(s) 662
PspN4I GGNNCC 2 cut(s) 49, 561
PspPI GGNCC 4 cut(s) 660, 792, 881, 1010
PspXI VCTCGAGB 1 cut(s) 502
PstI CTGCAG 1 cut(s) 962
RsaI GTAC 3 cut(s) 465, 561, 648
RsaNI GTAC 3 cut(s) 464, 560, 647
RseI CAYNNNNRTG 1 cut(s) 600
SacI GAGCTC 1 cut(s) 448
SapI GCTCTTC 2 cut(s) 947, 1110
SaqAI TTAA 5 cut(s) 348, 522, 819, 839, 1077
SatI GCNGC 4 cut(s) 813, 911, 958, 1005
Sau3AI GATC 4 cut(s) 103, 244, 548, 1069
Sau96I GGNCC 4 cut(s) 660, 792, 881, 1010
SchI GAGTC 4 cut(s) 47, 71, 128, 229
ScrFI CCNGG 2 cut(s) 664, 1014
SduI GDGCHC 2 cut(s) 155, 448
SfaNI GCATC 8 cut(s) 55, 365, 492, 604, 650, 686, 849, 1039
SfcI CTRYAG 2 cut(s) 189, 958
Sfr274I CTCGAG 1 cut(s) 502
SinI GGWCC 4 cut(s) 660, 792, 881, 1010
SlaI CTCGAG 1 cut(s) 502
SmiMI CAYNNNNRTG 1 cut(s) 600
SmlI CTYRAG 2 cut(s) 502, 761
SmoI CTYRAG 2 cut(s) 502, 761
Sse9I AATT 7 cut(s) 54, 93, 111, 139, 215, 737, 824
SsiI CCGC 3 cut(s) 301, 371, 474
SstI GAGCTC 1 cut(s) 448
StyD4I CCNGG 2 cut(s) 662, 1012
StyI CCWWGG 3 cut(s) 563, 795, 982
TaaI ACNGT 4 cut(s) 397, 637, 673, 970
TaiI ACGT 2 cut(s) 692, 709
TaqI TCGA 2 cut(s) 263, 503
TasI AATT 7 cut(s) 54, 93, 111, 139, 215, 737, 824
TatI WGTACW 1 cut(s) 463
TfiI GAWTC 2 cut(s) 305, 1193
Tru1I TTAA 5 cut(s) 348, 522, 819, 839, 1077
Tru9I TTAA 5 cut(s) 348, 522, 819, 839, 1077
TscAI CASTG 5 cut(s) 160, 400, 463, 678, 967
TseFI GTSAC 2 cut(s) 333, 930
TseI GCWGC 4 cut(s) 812, 910, 957, 1004
Tsp45I GTSAC 2 cut(s) 333, 930
TspDTI ATGAA 6 cut(s) 186, 426, 621, 717, 1138, 1182
TspGWI ACGGA 1 cut(s) 1005
TspRI CASTG 5 cut(s) 160, 400, 463, 678, 967
Van91I CCANNNNNTGG 1 cut(s) 941
VpaK11BI GGWCC 4 cut(s) 660, 792, 881, 1010
XapI RAATTY 2 cut(s) 93, 139
XcmI CCANNNNNNNNNTGG 1 cut(s) 670
XhoI CTCGAG 1 cut(s) 502
XmnI GAANNNNTTC 1 cut(s) 93
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.