Rh4CG036400

Targeting protein for Xklp2 (TPX2)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Reverse (-)
7358622 .. 7363090
4469 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG036400.1

Sequence Viewer

Length: 1227 bp
ATGTTTATCTTCTGTATAGCAAGTGCAATGGCAATAGAAGTCACAGATATTTGCATGGACAAGGAGTCAGATGGTGCCATAATTTATTCAGATGCTTCTCATGACTCAAATCGTGAAAGAATTCCCAATGATCATGCAATTTCAGAGTCATATGAGGAGACCCAAAATTTGCAAGAGAGCACTGAAGTAAAGGATTATGAAGTAAAGGAATGCACTACAGAAACCTCTGTTGACATTTCCCAATTGAGTCAGATTGAAAATTCTATCGAAGATCAGAATGTGGTAAGCTCGAAGCCTGATAATGGCAAGCCTGTGGAGAAGGTTCAGCGGGATTCTGAGAAAACAAAGGATGGAAATAAGTCACGCCCATCTGTTAATCAAGCATCAAAACCTTCTGCGGGAAATGGTAGAACAAAACACACTGTTCCGCGGCCATTTACCTTAGCAACTGAAAAGCGTGCTTCATATGGAGCTCGTCCAGTCAGTGCTGTACTTGATTGCGGTAATGGCATCAATAAATCACCAAACTCAAGCAATCCGCGACGTCTTAATACCACAAAGCATACCCAGCCAAGATCACCTTTGGTACCAAGGAAGTCATTTCAACTTGATGGGAAGAAGCATCCTGATGAGGAAGATACCTGTTCTGTTGCTTCCTCCACAGTAGCATCTGTACGAACTATTAGGTCCAGGACAACAGTGGCATCAGCTCCGACGTTTAGAAGTAATGAACGTGCAGAGAAAAGGAAGGAGTTTTATTCAAAATTAGAGGAGAAACATCACGCACTTGAGGCTGAGAAAAATCAAAGTGAAGCAAGGACCAAGGAAGAGAAAGAGGCAGCTGTTAAGCAATTGAGAAAAAGTTTAACGTTCAAGGCAAACCCGATGCCAAGTTTCTACCATGATGGACCTCCAGCTAAGACTGAACTCAAAAAGCCGCCCCCAACTCGTGCAAAGTCACCAAAGCTTGGCCGAAGGAAGAGCTGCAGTGATACAGTCAAAGTATCCCAAGGAGACGGAATAAAAGGAGCTGCTGGTCCAGGAAATCGGCACAGTATGGGTAGCTACAAAAAGGATGCTTCTGTGCAACGTAAGGATCAGATTAACATTCAAAATGGCAATGCTGATTGCAAGTTTGTTGAAGAGCCTAAGAAAGTGGATGAGATAAGCAAGTTCATTCCAGCCAACCTAAATGAACAGCATATGGACATATTTGTTGAATCCTGA

Protein Analysis

408

Amino Acids

45.23

Weight (kDa)

8.93

Isoelectric Point (pI)

49.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPX2 PF06886 239 - 315 3.3e-26 Targeting protein for Xklp2 (TPX2) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 547
Acc65I GGTACC 1 cut(s) 586
AccB1I GGYRCC 2 cut(s) 74, 586
AccB7I CCANNNNNTGG 1 cut(s) 968
AccII CGCG 2 cut(s) 430, 541
AciI CCGC 7 cut(s) 328, 398, 428, 430, 501, 539, 938
AclI AACGTT 1 cut(s) 869
AclWI GGATC 1 cut(s) 1104
AcoI YGGCCR 2 cut(s) 431, 970
AcsI RAATTY 3 cut(s) 120, 166, 259
AcuI CTGAAG 1 cut(s) 204
AcyI GRCGYC 1 cut(s) 544
AfaI GTAC 3 cut(s) 492, 588, 675
AfiI CCNNNNNNNGG 3 cut(s) 302, 398, 968
AgsI TTSAA 7 cut(s) 257, 605, 762, 874, 1112, 1142, 1220
AhdI GACNNNNNGTC 1 cut(s) 64
AjnI CCWGG 2 cut(s) 689, 1039
AluBI AGCT 9 cut(s) 288, 473, 710, 842, 917, 967, 984, 1031, 1065
AluI AGCT 9 cut(s) 288, 473, 710, 842, 917, 967, 984, 1031, 1065
Alw21I GWGCWC 2 cut(s) 182, 475
Alw26I GTCTC 2 cut(s) 152, 1008
AlwI GGATC 1 cut(s) 1104
AoxI GGCC 2 cut(s) 431, 970
ApeKI GCWGC 3 cut(s) 839, 984, 1031
ApoI RAATTY 3 cut(s) 120, 166, 259
ArsI GACNNNNNNTTYG 2 cut(s) 151, 183
Asp700I GAANNNNTTC 1 cut(s) 120
Asp718I GGTACC 1 cut(s) 586
AspS9I GGNCC 4 cut(s) 687, 819, 908, 1037
AsuHPI GGTGA 3 cut(s) 513, 570, 951
AvaII GGWCC 4 cut(s) 687, 819, 908, 1037
BanI GGYRCC 2 cut(s) 74, 586
BanII GRGCYC 1 cut(s) 475
BauI CACGAG 1 cut(s) 948
Bbv12I GWGCWC 2 cut(s) 182, 475
BbvI GCAGC 3 cut(s) 851, 971, 1018
BccI CCATC 5 cut(s) 65, 344, 376, 605, 899
BciT130I CCWGG 2 cut(s) 691, 1041
BciVI GTATCC 1 cut(s) 1015
BclI TGATCA 1 cut(s) 130
BcoDI GTCTC 2 cut(s) 152, 1008
BfmI CTRYAG 2 cut(s) 216, 985
BfuI GTATCC 1 cut(s) 1015
BisI GCNGC 5 cut(s) 431, 840, 938, 985, 1032
BlsI GCNGC 5 cut(s) 432, 841, 939, 986, 1033
Bme1390I CCNGG 2 cut(s) 691, 1041
Bme18I GGWCC 4 cut(s) 687, 819, 908, 1037
BmeRI GACNNNNNGTC 1 cut(s) 64
BmgT120I GGNCC 4 cut(s) 687, 819, 908, 1037
BmiI GGNNCC 2 cut(s) 76, 588
BmrFI CCNGG 2 cut(s) 691, 1041
BmsI GCATC 8 cut(s) 82, 392, 519, 631, 677, 713, 876, 1066
BpmI CTGGAG 1 cut(s) 897
Bpu10I CCTNAGC 1 cut(s) 442
BpuEI CTTGAG 2 cut(s) 514, 809
BsaHI GRCGYC 1 cut(s) 544
BsaI GGTCTC 1 cut(s) 152
BsaJI CCNNGG 4 cut(s) 428, 590, 822, 1009
Bsc4I CCNNNNNNNGG 3 cut(s) 302, 398, 968
Bse1I ACTGG 1 cut(s) 479
Bse3DI GCAATG 2 cut(s) 33, 1126
BseBI CCWGG 2 cut(s) 691, 1041
BseDI CCNNGG 4 cut(s) 428, 590, 822, 1009
BseGI GGATG 4 cut(s) 355, 622, 1081, 1165
BseLI CCNNNNNNNGG 3 cut(s) 302, 398, 968
BseMI GCAATG 2 cut(s) 33, 1126
BseMII CTCAG 2 cut(s) 327, 786
BseNI ACTGG 1 cut(s) 479
BseRI GAGGAG 2 cut(s) 170, 785
BseXI GCAGC 3 cut(s) 851, 971, 1018
BseYI CCCAGC 1 cut(s) 567
BsgI GTGCAG 1 cut(s) 756
Bsh1236I CGCG 2 cut(s) 430, 541
BshFI GGCC 2 cut(s) 433, 972
BshNI GGYRCC 2 cut(s) 74, 586
BsiHKAI GWGCWC 2 cut(s) 182, 475
BslI CCNNNNNNNGG 3 cut(s) 302, 398, 968
BsmAI GTCTC 2 cut(s) 152, 1008
BsmBI CGTCTC 1 cut(s) 1008
BsmI GAATGC 1 cut(s) 215
BsnI GGCC 2 cut(s) 433, 972
Bso31I GGTCTC 1 cut(s) 152
Bsp1286I GDGCHC 2 cut(s) 182, 475
Bsp143I GATC 4 cut(s) 130, 271, 575, 1096
BspACI CCGC 7 cut(s) 328, 398, 428, 430, 501, 539, 938
BspANI GGCC 2 cut(s) 433, 972
BspCNI CTCAG 2 cut(s) 328, 787
BspFNI CGCG 2 cut(s) 430, 541
BspHI TCATGA 1 cut(s) 100
BspLI GGNNCC 2 cut(s) 76, 588
BspMAI CTGCAG 1 cut(s) 989
BspPI GGATC 1 cut(s) 1104
BspQI GCTCTTC 2 cut(s) 974, 1137
BspT107I GGYRCC 2 cut(s) 74, 586
BspTNI GGTCTC 1 cut(s) 152
BsrDI GCAATG 2 cut(s) 33, 1126
BsrI ACTGG 1 cut(s) 479
BssECI CCNNGG 4 cut(s) 428, 590, 822, 1009
BssMI GATC 4 cut(s) 130, 271, 575, 1096
BssNI GRCGYC 1 cut(s) 544
BssSI CACGAG 1 cut(s) 948
BssT1I CCWWGG 3 cut(s) 590, 822, 1009
Bst2BI CACGAG 1 cut(s) 948
Bst2UI CCWGG 2 cut(s) 691, 1041
Bst4CI ACNGT 5 cut(s) 424, 664, 700, 997, 1055
Bst6I CTCTTC 3 cut(s) 822, 974, 1137
BstACI GRCGYC 1 cut(s) 544
BstC8I GCNNGC 2 cut(s) 308, 459
BstDEI CTNAG 5 cut(s) 336, 442, 795, 918, 1149
BstDSI CCRYGG 1 cut(s) 428
BstF5I GGATG 4 cut(s) 355, 622, 1081, 1165
BstFNI CGCG 2 cut(s) 430, 541
BstKTI GATC 4 cut(s) 133, 274, 578, 1099
BstMAI GTCTC 2 cut(s) 152, 1008
BstMBI GATC 4 cut(s) 130, 271, 575, 1096
BstMWI GCNNNNNNNGC 3 cut(s) 507, 568, 791
BstNI CCWGG 2 cut(s) 691, 1041
BstSCI CCNGG 2 cut(s) 689, 1039
BstSFI CTRYAG 2 cut(s) 216, 985
BstUI CGCG 2 cut(s) 430, 541
BstV1I GCAGC 3 cut(s) 851, 971, 1018
BsuI GTATCC 1 cut(s) 1015
BsuRI GGCC 2 cut(s) 433, 972
BtgI CCRYGG 1 cut(s) 428
BtsCI GGATG 4 cut(s) 355, 622, 1081, 1165
BtsI GCAGTG 1 cut(s) 994
BtsIMutI CAGTG 5 cut(s) 180, 420, 490, 705, 994
Cac8I GCNNGC 2 cut(s) 308, 459
CciI TCATGA 1 cut(s) 100
Cfr13I GGNCC 4 cut(s) 687, 819, 908, 1037
Cfr42I CCGCGG 1 cut(s) 431
Csp6I GTAC 3 cut(s) 491, 587, 674
CviAII CATG 4 cut(s) 55, 101, 134, 902
CviQI GTAC 3 cut(s) 491, 587, 674
DdeI CTNAG 5 cut(s) 336, 442, 795, 918, 1149
DpnI GATC 4 cut(s) 132, 273, 577, 1098
DpnII GATC 4 cut(s) 130, 271, 575, 1096
DriI GACNNNNNGTC 1 cut(s) 64
EaeI YGGCCR 2 cut(s) 431, 970
Eam1104I CTCTTC 3 cut(s) 822, 974, 1137
Eam1105I GACNNNNNGTC 1 cut(s) 64
EarI CTCTTC 3 cut(s) 822, 974, 1137
Ecl136II GAGCTC 1 cut(s) 473
Eco130I CCWWGG 3 cut(s) 590, 822, 1009
Eco24I GRGCYC 1 cut(s) 475
Eco31I GGTCTC 1 cut(s) 152
Eco47I GGWCC 4 cut(s) 687, 819, 908, 1037
Eco53kI GAGCTC 1 cut(s) 473
Eco57I CTGAAG 1 cut(s) 204
EcoICRI GAGCTC 1 cut(s) 473
EcoRI GAATTC 1 cut(s) 120
EcoRII CCWGG 2 cut(s) 689, 1039
EcoT14I CCWWGG 3 cut(s) 590, 822, 1009
EcoT38I GRGCYC 1 cut(s) 475
ErhI CCWWGG 3 cut(s) 590, 822, 1009
Esp3I CGTCTC 1 cut(s) 1008
FaeI CATG 4 cut(s) 58, 104, 137, 905
FalI AAGNNNNNCTT 2 cut(s) 565, 597
FatI CATG 4 cut(s) 54, 100, 133, 901
FauI CCCGC 2 cut(s) 321, 391
FauNDI CATATG 3 cut(s) 151, 466, 1203
FbaI TGATCA 1 cut(s) 130
Fnu4HI GCNGC 5 cut(s) 431, 840, 938, 985, 1032
FokI GGATG 4 cut(s) 362, 609, 1088, 1172
FriOI GRGCYC 1 cut(s) 475
Fsp4HI GCNGC 5 cut(s) 431, 840, 938, 985, 1032
GluI GCNGC 5 cut(s) 431, 840, 938, 985, 1032
GsaI CCCAGC 1 cut(s) 571
GsuI CTGGAG 1 cut(s) 897
HaeIII GGCC 2 cut(s) 433, 972
Hin1I GRCGYC 1 cut(s) 544
Hin1II CATG 4 cut(s) 58, 104, 137, 905
HincII GTYRAC 1 cut(s) 232
HindII GTYRAC 1 cut(s) 232
HindIII AAGCTT 1 cut(s) 965
HinfI GANTC 6 cut(s) 65, 104, 146, 247, 332, 1220
HphI GGTGA 3 cut(s) 513, 570, 951
Hpy166II GTNNAC 1 cut(s) 232
Hpy188I TCNGA 8 cut(s) 70, 91, 145, 252, 276, 337, 714, 1101
Hpy188III TCNNGA 4 cut(s) 101, 113, 626, 1224
Hpy8I GTNNAC 1 cut(s) 232
Hpy99I CGWCG 2 cut(s) 546, 718
HpyAV CCTTC 4 cut(s) 313, 402, 742, 969
HpyCH4III ACNGT 5 cut(s) 424, 664, 700, 997, 1055
HpyCH4IV ACGT 5 cut(s) 544, 716, 733, 869, 1090
HpyF10VI GCNNNNNNNGC 3 cut(s) 507, 568, 791
HpyF3I CTNAG 5 cut(s) 336, 442, 795, 918, 1149
HpySE526I ACGT 5 cut(s) 544, 716, 733, 869, 1090
Hsp92I GRCGYC 1 cut(s) 544
Hsp92II CATG 4 cut(s) 58, 104, 137, 905
KpnI GGTACC 1 cut(s) 590
Ksp22I TGATCA 1 cut(s) 130
KspI CCGCGG 1 cut(s) 431
Kzo9I GATC 4 cut(s) 130, 271, 575, 1096
LguI GCTCTTC 2 cut(s) 974, 1137
LmnI GCTCC 3 cut(s) 470, 715, 1028
Lsp1109I GCAGC 3 cut(s) 851, 971, 1018
LweI GCATC 8 cut(s) 82, 392, 519, 631, 677, 713, 876, 1066
MaeII ACGT 5 cut(s) 544, 716, 733, 869, 1090
MaeIII GTNAC 3 cut(s) 40, 360, 957
MalI GATC 4 cut(s) 132, 273, 577, 1098
MboI GATC 4 cut(s) 130, 271, 575, 1096
MboII GAAGA 6 cut(s) 281, 628, 647, 839, 991, 1154
MfeI CAATTG 2 cut(s) 242, 851
MhlI GDGCHC 2 cut(s) 182, 475
MluCI AATT 8 cut(s) 81, 120, 138, 166, 242, 259, 764, 851
MlyI GAGTC 4 cut(s) 74, 98, 155, 256
MmeI TCCRAC 1 cut(s) 737
MnlI CCTC 8 cut(s) 148, 235, 625, 667, 763, 784, 829, 921
MroXI GAANNNNTTC 1 cut(s) 120
MseI TTAA 5 cut(s) 375, 549, 846, 866, 1104
MslI CAYNNNNRTG 1 cut(s) 627
MspA1I CMGCKG 3 cut(s) 328, 430, 842
MspR9I CCNGG 2 cut(s) 691, 1041
MunI CAATTG 2 cut(s) 242, 851
Mva1269I GAATGC 1 cut(s) 215
MvaI CCWGG 2 cut(s) 691, 1041
MvnI CGCG 2 cut(s) 430, 541
MwoI GCNNNNNNNGC 3 cut(s) 507, 568, 791
NdeI CATATG 3 cut(s) 151, 466, 1203
NdeII GATC 4 cut(s) 130, 271, 575, 1096
NlaIII CATG 4 cut(s) 58, 104, 137, 905
NlaIV GGNNCC 2 cut(s) 76, 588
NmuCI GTSAC 3 cut(s) 40, 360, 957
PagI TCATGA 1 cut(s) 100
PciSI GCTCTTC 2 cut(s) 974, 1137
PctI GAATGC 1 cut(s) 215
PdmI GAANNNNTTC 1 cut(s) 120
PfeI GAWTC 2 cut(s) 332, 1220
PflMI CCANNNNNTGG 1 cut(s) 968
PfoI TCCNGGA 2 cut(s) 689, 1039
PkrI GCNGC 5 cut(s) 432, 841, 939, 986, 1033
PleI GAGTC 4 cut(s) 73, 98, 154, 255
PpsI GAGTC 4 cut(s) 73, 98, 154, 255
Psp124BI GAGCTC 1 cut(s) 475
Psp1406I AACGTT 1 cut(s) 869
Psp6I CCWGG 2 cut(s) 689, 1039
PspFI CCCAGC 1 cut(s) 567
PspGI CCWGG 2 cut(s) 689, 1039
PspN4I GGNNCC 2 cut(s) 76, 588
PspPI GGNCC 4 cut(s) 687, 819, 908, 1037
PstI CTGCAG 1 cut(s) 989
PvuII CAGCTG 1 cut(s) 842
RsaI GTAC 3 cut(s) 492, 588, 675
RsaNI GTAC 3 cut(s) 491, 587, 674
RseI CAYNNNNRTG 1 cut(s) 627
SacI GAGCTC 1 cut(s) 475
SacII CCGCGG 1 cut(s) 431
SapI GCTCTTC 2 cut(s) 974, 1137
SaqAI TTAA 5 cut(s) 375, 549, 846, 866, 1104
SatI GCNGC 5 cut(s) 431, 840, 938, 985, 1032
Sau3AI GATC 4 cut(s) 130, 271, 575, 1096
Sau96I GGNCC 4 cut(s) 687, 819, 908, 1037
SchI GAGTC 4 cut(s) 74, 98, 155, 256
ScrFI CCNGG 2 cut(s) 691, 1041
SduI GDGCHC 2 cut(s) 182, 475
SfaNI GCATC 8 cut(s) 82, 392, 519, 631, 677, 713, 876, 1066
SfcI CTRYAG 2 cut(s) 216, 985
Sfr303I CCGCGG 1 cut(s) 431
SgrBI CCGCGG 1 cut(s) 431
SinI GGWCC 4 cut(s) 687, 819, 908, 1037
SmiMI CAYNNNNRTG 1 cut(s) 627
SmlI CTYRAG 2 cut(s) 529, 788
SmoI CTYRAG 2 cut(s) 529, 788
Sse9I AATT 8 cut(s) 81, 120, 138, 166, 242, 259, 764, 851
SsiI CCGC 7 cut(s) 328, 398, 428, 430, 501, 539, 938
SstI GAGCTC 1 cut(s) 475
StyD4I CCNGG 2 cut(s) 689, 1039
StyI CCWWGG 3 cut(s) 590, 822, 1009
TaaI ACNGT 5 cut(s) 424, 664, 700, 997, 1055
TaiI ACGT 5 cut(s) 547, 719, 736, 872, 1093
TaqI TCGA 2 cut(s) 267, 290
TasI AATT 8 cut(s) 81, 120, 138, 166, 242, 259, 764, 851
TatI WGTACW 1 cut(s) 490
TauI GCSGC 2 cut(s) 433, 940
TfiI GAWTC 2 cut(s) 332, 1220
Tru1I TTAA 5 cut(s) 375, 549, 846, 866, 1104
Tru9I TTAA 5 cut(s) 375, 549, 846, 866, 1104
TscAI CASTG 5 cut(s) 187, 427, 490, 705, 994
TseFI GTSAC 3 cut(s) 40, 360, 957
TseI GCWGC 3 cut(s) 839, 984, 1031
Tsp45I GTSAC 3 cut(s) 40, 360, 957
TspDTI ATGAA 5 cut(s) 213, 453, 744, 1165, 1209
TspGWI ACGGA 1 cut(s) 1032
TspRI CASTG 5 cut(s) 187, 427, 490, 705, 994
Van91I CCANNNNNTGG 1 cut(s) 968
VpaK11BI GGWCC 4 cut(s) 687, 819, 908, 1037
XapI RAATTY 3 cut(s) 120, 166, 259
XcmI CCANNNNNNNNNTGG 1 cut(s) 697
XmnI GAANNNNTTC 1 cut(s) 120
ZraI GACGTC 1 cut(s) 545
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.