rRNA-processing protein FCF1 homolog
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000000919 RLG00000001194 RLG00000009585 RLG00000012275 RLG00000015005 RLG00000015233 RLG00000020579 RLG00000021013 RLG00000024378 RLG00000026389 RLG00000033061 RLG00000034808 RLG00000036761 |
| rosa_samantha | Rh2CG476000 Rh5DG197200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 13, 352 |
| AfaI | GTAC | 3 cut(s) | 192, 290, 428 |
| AgsI | TTSAA | 4 cut(s) | 23, 211, 352, 357 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 137 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 391, 423 |
| AluBI | AGCT | 2 cut(s) | 280, 382 |
| AluI | AGCT | 2 cut(s) | 280, 382 |
| Alw26I | GTCTC | 2 cut(s) | 37, 154 |
| ApoI | RAATTY | 2 cut(s) | 13, 352 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 36, 68 |
| AsuC2I | CCSGG | 1 cut(s) | 455 |
| AsuHPI | GGTGA | 1 cut(s) | 83 |
| BbvCI | CCTCAGC | 1 cut(s) | 306 |
| BccI | CCATC | 2 cut(s) | 31, 457 |
| BciVI | GTATCC | 1 cut(s) | 460 |
| BclI | TGATCA | 1 cut(s) | 73 |
| BcnI | CCSGG | 1 cut(s) | 455 |
| BcoDI | GTCTC | 2 cut(s) | 37, 154 |
| BfaI | CTAG | 3 cut(s) | 168, 198, 281 |
| BfuI | GTATCC | 1 cut(s) | 460 |
| BlpI | GCTNAGC | 1 cut(s) | 276 |
| Bme1390I | CCNGG | 1 cut(s) | 455 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 137 |
| BmrFI | CCNGG | 1 cut(s) | 455 |
| BmsI | GCATC | 1 cut(s) | 210 |
| BpmI | CTGGAG | 1 cut(s) | 49 |
| Bpu10I | CCTNAGC | 1 cut(s) | 306 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 276 |
| BpuEI | CTTGAG | 1 cut(s) | 155 |
| BpuMI | CCSGG | 1 cut(s) | 455 |
| Bse1I | ACTGG | 1 cut(s) | 218 |
| BseMII | CTCAG | 3 cut(s) | 267, 297, 382 |
| BseNI | ACTGG | 1 cut(s) | 218 |
| BseRI | GAGGAG | 1 cut(s) | 356 |
| BsiSI | CCGG | 1 cut(s) | 454 |
| BsmAI | GTCTC | 2 cut(s) | 37, 154 |
| Bsp143I | GATC | 2 cut(s) | 56, 73 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 276 |
| BspCNI | CTCAG | 3 cut(s) | 268, 298, 381 |
| BsrI | ACTGG | 1 cut(s) | 218 |
| BssMI | GATC | 2 cut(s) | 56, 73 |
| Bst4CI | ACNGT | 2 cut(s) | 153, 417 |
| BstDEI | CTNAG | 4 cut(s) | 276, 306, 368, 503 |
| BstKTI | GATC | 2 cut(s) | 59, 76 |
| BstMAI | GTCTC | 2 cut(s) | 37, 154 |
| BstMBI | GATC | 2 cut(s) | 56, 73 |
| BstNSI | RCATGY | 1 cut(s) | 253 |
| BstSCI | CCNGG | 1 cut(s) | 453 |
| BsuI | GTATCC | 1 cut(s) | 460 |
| BtsI | GCAGTG | 1 cut(s) | 432 |
| BtsIMutI | CAGTG | 1 cut(s) | 432 |
| Csp6I | GTAC | 3 cut(s) | 191, 289, 427 |
| CviAII | CATG | 6 cut(s) | 157, 226, 250, 330, 539, 573 |
| CviJI | RGCY | 2 cut(s) | 280, 382 |
| CviKI_1 | RGCY | 2 cut(s) | 280, 382 |
| CviQI | GTAC | 3 cut(s) | 191, 289, 427 |
| DdeI | CTNAG | 4 cut(s) | 276, 306, 368, 503 |
| DpnI | GATC | 2 cut(s) | 58, 75 |
| DpnII | GATC | 2 cut(s) | 56, 73 |
| DriI | GACNNNNNGTC | 1 cut(s) | 137 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 137 |
| EcoRI | GAATTC | 2 cut(s) | 13, 352 |
| FaeI | CATG | 6 cut(s) | 160, 229, 253, 333, 542, 576 |
| FatI | CATG | 6 cut(s) | 156, 225, 249, 329, 538, 572 |
| FbaI | TGATCA | 1 cut(s) | 73 |
| FspBI | CTAG | 3 cut(s) | 168, 198, 281 |
| GsuI | CTGGAG | 1 cut(s) | 49 |
| HapII | CCGG | 1 cut(s) | 454 |
| Hin1II | CATG | 6 cut(s) | 160, 229, 253, 333, 542, 576 |
| HinfI | GANTC | 3 cut(s) | 31, 82, 364 |
| HpaII | CCGG | 1 cut(s) | 454 |
| HphI | GGTGA | 1 cut(s) | 83 |
| Hpy188I | TCNGA | 2 cut(s) | 36, 567 |
| Hpy188III | TCNNGA | 1 cut(s) | 493 |
| HpyAV | CCTTC | 1 cut(s) | 100 |
| HpyCH4III | ACNGT | 2 cut(s) | 153, 417 |
| HpyCH4V | TGCA | 1 cut(s) | 145 |
| HpyF3I | CTNAG | 4 cut(s) | 276, 306, 368, 503 |
| Hsp92II | CATG | 6 cut(s) | 160, 229, 253, 333, 542, 576 |
| Ksp22I | TGATCA | 1 cut(s) | 73 |
| Kzo9I | GATC | 2 cut(s) | 56, 73 |
| LmnI | GCTCC | 1 cut(s) | 4 |
| LpnPI | CCDG | 7 cut(s) | 13, 45, 198, 199, 400, 467, 506 |
| LweI | GCATC | 1 cut(s) | 210 |
| MaeI | CTAG | 3 cut(s) | 168, 198, 281 |
| MaeIII | GTNAC | 1 cut(s) | 220 |
| MalI | GATC | 2 cut(s) | 58, 75 |
| MboI | GATC | 2 cut(s) | 56, 73 |
| MboII | GAAGA | 3 cut(s) | 185, 373, 399 |
| MluCI | AATT | 5 cut(s) | 13, 352, 481, 530, 544 |
| MlyI | GAGTC | 2 cut(s) | 40, 76 |
| MmeI | TCCRAC | 1 cut(s) | 210 |
| MnlI | CCTC | 5 cut(s) | 130, 301, 334, 337, 489 |
| MseI | TTAA | 2 cut(s) | 312, 423 |
| MslI | CAYNNNNRTG | 2 cut(s) | 248, 437 |
| MspI | CCGG | 1 cut(s) | 454 |
| MspR9I | CCNGG | 1 cut(s) | 455 |
| NciI | CCSGG | 1 cut(s) | 455 |
| NdeII | GATC | 2 cut(s) | 56, 73 |
| NlaIII | CATG | 6 cut(s) | 160, 229, 253, 333, 542, 576 |
| NmuCI | GTSAC | 1 cut(s) | 220 |
| NspI | RCATGY | 1 cut(s) | 253 |
| PfeI | GAWTC | 1 cut(s) | 364 |
| PleI | GAGTC | 2 cut(s) | 39, 76 |
| PpsI | GAGTC | 2 cut(s) | 39, 76 |
| RsaI | GTAC | 3 cut(s) | 192, 290, 428 |
| RsaNI | GTAC | 3 cut(s) | 191, 289, 427 |
| RseI | CAYNNNNRTG | 2 cut(s) | 248, 437 |
| SaqAI | TTAA | 2 cut(s) | 312, 423 |
| Sau3AI | GATC | 2 cut(s) | 56, 73 |
| SchI | GAGTC | 2 cut(s) | 40, 76 |
| ScrFI | CCNGG | 1 cut(s) | 455 |
| SetI | ASST | 8 cut(s) | 54, 141, 282, 312, 327, 348, 384, 565 |
| SfaNI | GCATC | 1 cut(s) | 210 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 248, 437 |
| SmlI | CTYRAG | 1 cut(s) | 134 |
| SmoI | CTYRAG | 1 cut(s) | 134 |
| Sse9I | AATT | 5 cut(s) | 13, 352, 481, 530, 544 |
| SspMI | CTAG | 3 cut(s) | 168, 198, 281 |
| StyD4I | CCNGG | 1 cut(s) | 453 |
| TaaI | ACNGT | 2 cut(s) | 153, 417 |
| TaqI | TCGA | 3 cut(s) | 17, 55, 259 |
| TasI | AATT | 5 cut(s) | 13, 352, 481, 530, 544 |
| TatI | WGTACW | 3 cut(s) | 190, 288, 426 |
| TfiI | GAWTC | 1 cut(s) | 364 |
| Tru1I | TTAA | 2 cut(s) | 312, 423 |
| Tru9I | TTAA | 2 cut(s) | 312, 423 |
| TscAI | CASTG | 1 cut(s) | 439 |
| TseFI | GTSAC | 1 cut(s) | 220 |
| Tsp45I | GTSAC | 1 cut(s) | 220 |
| TspDTI | ATGAA | 1 cut(s) | 466 |
| TspRI | CASTG | 1 cut(s) | 439 |
| XapI | RAATTY | 2 cut(s) | 13, 352 |
| XceI | RCATGY | 1 cut(s) | 253 |
| XspI | CTAG | 3 cut(s) | 168, 198, 281 |