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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g33792 |
| malus_domestica | MD03G1108800.v1.1 MD11G1122600.v1.1 |
| prunus_persica | Prupe.3G138200_v2.0.a1 Prupe.6G092000_v2.0.a1 |
| rosa_laevigata | RLG00000014218 RLG00000035462 RLG00000035472 |
| rosa_multiflora | Rmu_co8089466.1_g000001 Rmu_sc0000338.1_g000001 Rmu_sc0000689.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00019350 |
| rosa_rugosa | Rorug05G0339900 |
| rosa_samantha | Rh5AG402100 Rh5BG414300 Rh5CG438900 Rh5DG428900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 265 |
| AciI | CCGC | 5 cut(s) | 299, 495, 532, 616, 634 |
| AcsI | RAATTY | 2 cut(s) | 424, 447 |
| AfaI | GTAC | 1 cut(s) | 359 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 146, 147 |
| AgsI | TTSAA | 3 cut(s) | 118, 259, 608 |
| AluBI | AGCT | 1 cut(s) | 176 |
| AluI | AGCT | 1 cut(s) | 176 |
| Alw26I | GTCTC | 3 cut(s) | 50, 391, 495 |
| AoxI | GGCC | 4 cut(s) | 376, 529, 613, 644 |
| ApoI | RAATTY | 2 cut(s) | 424, 447 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 451, 483 |
| AspLEI | GCGC | 1 cut(s) | 313 |
| AspS9I | GGNCC | 2 cut(s) | 529, 644 |
| AsuHPI | GGTGA | 5 cut(s) | 239, 279, 355, 530, 583 |
| AsuII | TTCGAA | 1 cut(s) | 429 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 350, 382 |
| BauI | CACGAG | 1 cut(s) | 474 |
| BccI | CCATC | 1 cut(s) | 414 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 44, 78 |
| BcoDI | GTCTC | 3 cut(s) | 50, 391, 495 |
| BfaI | CTAG | 1 cut(s) | 108 |
| BfmI | CTRYAG | 1 cut(s) | 21 |
| BisI | GCNGC | 2 cut(s) | 532, 616 |
| BlsI | GCNGC | 2 cut(s) | 533, 617 |
| BmgT120I | GGNCC | 2 cut(s) | 529, 644 |
| BmiI | GGNNCC | 1 cut(s) | 584 |
| BmsI | GCATC | 1 cut(s) | 19 |
| Bpu14I | TTCGAA | 1 cut(s) | 429 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 146, 147 |
| Bse1I | ACTGG | 1 cut(s) | 112 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 146, 147 |
| BseNI | ACTGG | 1 cut(s) | 112 |
| BseRI | GAGGAG | 2 cut(s) | 536, 539 |
| BseYI | CCCAGC | 1 cut(s) | 243 |
| BshFI | GGCC | 4 cut(s) | 378, 531, 615, 646 |
| BslFI | GGGAC | 1 cut(s) | 281 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 146, 147 |
| BsmAI | GTCTC | 3 cut(s) | 50, 391, 495 |
| BsmBI | CGTCTC | 1 cut(s) | 50 |
| BsmFI | GGGAC | 1 cut(s) | 281 |
| BsnI | GGCC | 4 cut(s) | 378, 531, 615, 646 |
| Bsp119I | TTCGAA | 1 cut(s) | 429 |
| Bsp143I | GATC | 2 cut(s) | 433, 621 |
| BspACI | CCGC | 5 cut(s) | 299, 495, 532, 616, 634 |
| BspANI | GGCC | 4 cut(s) | 378, 531, 615, 646 |
| BspLI | GGNNCC | 1 cut(s) | 584 |
| BspT104I | TTCGAA | 1 cut(s) | 429 |
| BsrI | ACTGG | 1 cut(s) | 112 |
| BssMI | GATC | 2 cut(s) | 433, 621 |
| BssSI | CACGAG | 1 cut(s) | 474 |
| Bst2BI | CACGAG | 1 cut(s) | 474 |
| Bst4CI | ACNGT | 1 cut(s) | 538 |
| BstBI | TTCGAA | 1 cut(s) | 429 |
| BstC8I | GCNNGC | 2 cut(s) | 63, 67 |
| BstDEI | CTNAG | 1 cut(s) | 177 |
| BstEII | GGTNACC | 1 cut(s) | 285 |
| BstHHI | GCGC | 1 cut(s) | 313 |
| BstKTI | GATC | 2 cut(s) | 436, 624 |
| BstMAI | GTCTC | 3 cut(s) | 50, 391, 495 |
| BstMBI | GATC | 2 cut(s) | 433, 621 |
| BstNSI | RCATGY | 1 cut(s) | 457 |
| BstPI | GGTNACC | 1 cut(s) | 285 |
| BstSFI | CTRYAG | 1 cut(s) | 21 |
| BsuRI | GGCC | 4 cut(s) | 378, 531, 615, 646 |
| BtgZI | GCGATG | 1 cut(s) | 42 |
| Cac8I | GCNNGC | 2 cut(s) | 63, 67 |
| CfoI | GCGC | 1 cut(s) | 313 |
| Cfr13I | GGNCC | 2 cut(s) | 529, 644 |
| CseI | GACGC | 1 cut(s) | 67 |
| Csp6I | GTAC | 1 cut(s) | 358 |
| CviAII | CATG | 1 cut(s) | 454 |
| CviQI | GTAC | 1 cut(s) | 358 |
| DdeI | CTNAG | 1 cut(s) | 177 |
| DpnI | GATC | 2 cut(s) | 435, 623 |
| DpnII | GATC | 2 cut(s) | 433, 621 |
| Eco91I | GGTNACC | 1 cut(s) | 285 |
| EcoO65I | GGTNACC | 1 cut(s) | 285 |
| EcoRI | GAATTC | 1 cut(s) | 447 |
| Esp3I | CGTCTC | 1 cut(s) | 50 |
| FaeI | CATG | 1 cut(s) | 457 |
| FaiI | YATR | 3 cut(s) | 23, 279, 455 |
| FaqI | GGGAC | 1 cut(s) | 281 |
| FatI | CATG | 1 cut(s) | 453 |
| FauI | CCCGC | 2 cut(s) | 306, 502 |
| FblI | GTMKAC | 1 cut(s) | 265 |
| Fnu4HI | GCNGC | 2 cut(s) | 532, 616 |
| Fsp4HI | GCNGC | 2 cut(s) | 532, 616 |
| FspBI | CTAG | 1 cut(s) | 108 |
| GlaI | GCGC | 1 cut(s) | 312 |
| GluI | GCNGC | 2 cut(s) | 532, 616 |
| GsaI | CCCAGC | 1 cut(s) | 247 |
| HaeIII | GGCC | 4 cut(s) | 378, 531, 615, 646 |
| HgaI | GACGC | 1 cut(s) | 67 |
| HhaI | GCGC | 1 cut(s) | 313 |
| Hin1II | CATG | 1 cut(s) | 457 |
| Hin6I | GCGC | 1 cut(s) | 311 |
| HinP1I | GCGC | 1 cut(s) | 311 |
| HincII | GTYRAC | 1 cut(s) | 266 |
| HindII | GTYRAC | 1 cut(s) | 266 |
| HinfI | GANTC | 1 cut(s) | 274 |
| HphI | GGTGA | 5 cut(s) | 239, 279, 355, 530, 583 |
| Hpy166II | GTNNAC | 2 cut(s) | 266, 541 |
| Hpy188I | TCNGA | 1 cut(s) | 404 |
| Hpy8I | GTNNAC | 2 cut(s) | 266, 541 |
| Hpy99I | CGWCG | 1 cut(s) | 420 |
| HpyAV | CCTTC | 2 cut(s) | 196, 376 |
| HpyCH4III | ACNGT | 1 cut(s) | 538 |
| HpyCH4IV | ACGT | 1 cut(s) | 501 |
| HpyCH4V | TGCA | 2 cut(s) | 32, 660 |
| HpyF3I | CTNAG | 1 cut(s) | 177 |
| HpySE526I | ACGT | 1 cut(s) | 501 |
| Hsp92II | CATG | 1 cut(s) | 457 |
| HspAI | GCGC | 1 cut(s) | 311 |
| Kzo9I | GATC | 2 cut(s) | 433, 621 |
| LmnI | GCTCC | 1 cut(s) | 588 |
| LpnPI | CCDG | 8 cut(s) | 25, 125, 257, 321, 327, 396, 640, 660 |
| LweI | GCATC | 1 cut(s) | 19 |
| MaeI | CTAG | 1 cut(s) | 108 |
| MaeII | ACGT | 1 cut(s) | 501 |
| MaeIII | GTNAC | 2 cut(s) | 156, 285 |
| MalI | GATC | 2 cut(s) | 435, 623 |
| MboI | GATC | 2 cut(s) | 433, 621 |
| MboII | GAAGA | 4 cut(s) | 182, 407, 443, 519 |
| MluCI | AATT | 7 cut(s) | 12, 142, 280, 411, 424, 447, 510 |
| MnlI | CCTC | 9 cut(s) | 124, 248, 310, 334, 514, 517, 520, 567, 605 |
| MseI | TTAA | 3 cut(s) | 71, 197, 233 |
| NdeII | GATC | 2 cut(s) | 433, 621 |
| NlaIII | CATG | 1 cut(s) | 457 |
| NlaIV | GGNNCC | 1 cut(s) | 584 |
| NmuCI | GTSAC | 1 cut(s) | 285 |
| NspI | RCATGY | 1 cut(s) | 457 |
| NspV | TTCGAA | 1 cut(s) | 429 |
| PfeI | GAWTC | 1 cut(s) | 274 |
| PkrI | GCNGC | 2 cut(s) | 533, 617 |
| PspEI | GGTNACC | 1 cut(s) | 285 |
| PspFI | CCCAGC | 1 cut(s) | 243 |
| PspN4I | GGNNCC | 1 cut(s) | 584 |
| PspPI | GGNCC | 2 cut(s) | 529, 644 |
| RsaI | GTAC | 1 cut(s) | 359 |
| RsaNI | GTAC | 1 cut(s) | 358 |
| SalI | GTCGAC | 1 cut(s) | 264 |
| SaqAI | TTAA | 3 cut(s) | 71, 197, 233 |
| SatI | GCNGC | 2 cut(s) | 532, 616 |
| Sau3AI | GATC | 2 cut(s) | 433, 621 |
| Sau96I | GGNCC | 2 cut(s) | 529, 644 |
| SfaNI | GCATC | 1 cut(s) | 19 |
| SfcI | CTRYAG | 1 cut(s) | 21 |
| SfuI | TTCGAA | 1 cut(s) | 429 |
| Sse9I | AATT | 7 cut(s) | 12, 142, 280, 411, 424, 447, 510 |
| SsiI | CCGC | 5 cut(s) | 299, 495, 532, 616, 634 |
| SspI | AATATT | 2 cut(s) | 97, 251 |
| SspMI | CTAG | 1 cut(s) | 108 |
| TaaI | ACNGT | 1 cut(s) | 538 |
| TaiI | ACGT | 1 cut(s) | 504 |
| TaqI | TCGA | 4 cut(s) | 265, 415, 429, 436 |
| TasI | AATT | 7 cut(s) | 12, 142, 280, 411, 424, 447, 510 |
| TatI | WGTACW | 1 cut(s) | 357 |
| TauI | GCSGC | 2 cut(s) | 534, 618 |
| TfiI | GAWTC | 1 cut(s) | 274 |
| Tru1I | TTAA | 3 cut(s) | 71, 197, 233 |
| Tru9I | TTAA | 3 cut(s) | 71, 197, 233 |
| TseFI | GTSAC | 1 cut(s) | 285 |
| Tsp45I | GTSAC | 1 cut(s) | 285 |
| TspDTI | ATGAA | 2 cut(s) | 215, 266 |
| XapI | RAATTY | 2 cut(s) | 424, 447 |
| XceI | RCATGY | 1 cut(s) | 457 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 148 |
| XmiI | GTMKAC | 1 cut(s) | 265 |
| XspI | CTAG | 1 cut(s) | 108 |