RLG00000018131

VQ motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0012018
Physical Location & Seq
Reverse (-)
25643901 .. 25645244
1344 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000018131

Sequence Viewer

Length: 1344 bp
ATGGATTCCGGTAACAGCGGAAGTATGCAGTCCTCGAGCGGCGGCGACGACGAGTCGTACGACTCACGCGCGGAGTCGATCTCGGCCTTGCTGGGTCCCACCATGACTAACCACCACCACCACCACCCACCGCAAGTACCGCAACAACAACAACAACACCACCGCCATCATCCTCATGTTGAGTTCGACACCTTATCCAACATCTTCGATTCGAGGCTCACAAACCCGAACCCACTCCTCAACCTGGACATGGTGTGGTCCAAGACGCTGAGATCCGACCCGAGTATGTCCGATCTTGGAGGCCCGAACGAGCTCAGCCAACCCTTTTTGACCAATAGTCAACTAGGAGGACAAGTCAGCAGAACAGGAGGCGGCGGCGGCGGCGGAGGGTCATCTACTTTTACTCAGATCCCATCCTCGTCAGCTCCGAACGACCAGACCAACAACAACGTCGGCGGCGTTCGGAACAGCAACCCAAAAAAGAGGTCGAGAGCGTCGAGGCGTGCACCCACTACGGTTCTCACCACAGACACAACAAACTTCCGAGCCATGGTTCAAGAATTTACAGGTATTCCTGCACCCCCATTTACGAGTTCGCCTTTTCCTAGAAGCAGGTTGGATTTGTTTGGGTCTTCGGCTTCATCTATGGTTAGATCGGGCCCGGGTCCGAATCATATGGATCCTTCTTCTCTTCCTCCTTATCTGTTGAGACCATTTGCTCATAAAGCTCCACTACTACCTTCTTCTCCATCTCCATCTTTGTTGCCCTCTAGTAATTCAAATACTAATAGTAATATTGGTGGTTCTAATCTACAACAGTCTCAGAGTCTTTTGAACATGAACAACATGCAAAACTCCTCCTCTTCATCAGTTCTGAATTTTCAGTCCCTCTTTCAAAACCAGCAGCCTCAGCCGAATTTACCAAAATACCCATTACCCGGTTCAGGCAATATTCTTGGCTCCTCCAAGTCTCAAGGCTCTCTGGGTGTGCTTGAAGATCAGTTTGGTTTGAGCCATGGGCTAAATGTGCAGCAGCTTCCTAACATCGTGTCGTCGTCGTCCTCGGATGGTGGCCGTACGCTTCAGCAGCAGCAACCTAGGCACGACAATAACCAGAGGACGACAACGACGACAATGAACTGGGTTGACAACAACAAGAACGACGGCAATGTCGATCTTCTGAGGTCCGTCAATGGGAATTACAGTAATGGCAAACTAAACTACGCGGCTTCTTCTTCGTCGAATGTTGTCGATAAAGCTGGGGTGCAGCTGGAGAATAATGTGAGTACTACTACAGCTAGAAGTGAAGGTATGATGGAATCATGGATTTGCTCTTCAGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VQ

Protein Analysis

448

Amino Acids

47.8

Weight (kDa)

6.93

Isoelectric Point (pI)

68.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VQ PF05678 168 - 195 1.2e-11 VQ motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012018)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G65170 AT5G65170
fragaria_vesca FvH4_1g21110
malus_domestica MD01G1027700.v1.1 MD15G1325900.v1.1
prunus_persica Prupe.6G183200_v2.0.a1 Prupe.6G183200_v2.0.a1
pyrus_communis pycom01g05580 pycom15g28700
rosa_chinensis RchiOBHm_Chr2g0114891
rosa_laevigata RLG00000018131
rosa_multiflora Rmu_sc0002764.1_g000028
rosa_roxburghii Rroxscaffold_2G00130390
rosa_rugosa Rorug02G0191400
rosa_samantha Rh2AG250000 Rh2BG259600 Rh2CG254400 Rh2DG258200
rosa_wichuraiana Rw2G019500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1169
Acc36I ACCTGC 1 cut(s) 603
AccBSI CCGCTC 1 cut(s) 39
AccII CGCG 3 cut(s) 69, 71, 1226
AclWI GGATC 4 cut(s) 267, 403, 674, 687
AcoI YGGCCR 1 cut(s) 1072
AcsI RAATTY 3 cut(s) 560, 877, 916
AcuI CTGAAG 2 cut(s) 1067, 1320
AfaI GTAC 4 cut(s) 59, 138, 1078, 1288
AfiI CCNNNNNNNGG 6 cut(s) 244, 250, 550, 938, 944, 1194
AgsI TTSAA 5 cut(s) 557, 780, 835, 896, 995
AhdI GACNNNNNGTC 2 cut(s) 52, 336
AjnI CCWGG 1 cut(s) 243
AjuI GAANNNNNNNTTGG 2 cut(s) 987, 1019
AluBI AGCT 7 cut(s) 313, 425, 728, 1036, 1259, 1270, 1298
AluI AGCT 7 cut(s) 313, 425, 728, 1036, 1259, 1270, 1298
Alw21I GWGCWC 2 cut(s) 315, 508
Alw26I GTCTC 3 cut(s) 703, 825, 975
Alw44I GTGCAC 1 cut(s) 504
AlwI GGATC 4 cut(s) 267, 403, 674, 687
Ama87I CYCGRG 3 cut(s) 34, 280, 661
AoxI GGCC 4 cut(s) 84, 301, 658, 1072
ApaI GGGCCC 1 cut(s) 662
ApaLI GTGCAC 1 cut(s) 504
ApeKI GCWGC 6 cut(s) 904, 1030, 1033, 1087, 1090, 1267
ApoI RAATTY 3 cut(s) 560, 877, 916
ArsI GACNNNNNNTTYG 2 cut(s) 470, 502
AspA2I CCTAGG 1 cut(s) 1097
AspLEI GCGC 1 cut(s) 71
AspS9I GGNCC 7 cut(s) 95, 258, 302, 658, 659, 665, 1185
AsuC2I CCSGG 3 cut(s) 662, 663, 939
AsuHPI GGTGA 1 cut(s) 514
AvaI CYCGRG 3 cut(s) 34, 280, 661
AvaII GGWCC 4 cut(s) 95, 258, 665, 1185
AvrII CCTAGG 1 cut(s) 1097
BaeGI GKGCMC 2 cut(s) 508, 662
BamHI GGATCC 1 cut(s) 679
BanII GRGCYC 2 cut(s) 315, 662
BbsI GAAGAC 1 cut(s) 624
Bbv12I GWGCWC 2 cut(s) 315, 508
BbvCI CCTCAGC 1 cut(s) 909
BbvI GCAGC 6 cut(s) 916, 1042, 1045, 1099, 1102, 1279
BccI CCATC 6 cut(s) 174, 421, 757, 763, 1061, 1309
BceAI ACGGC 2 cut(s) 1059, 1180
BciT130I CCWGG 1 cut(s) 245
BcnI CCSGG 3 cut(s) 662, 663, 939
BcoDI GTCTC 3 cut(s) 703, 825, 975
BfaI CTAG 5 cut(s) 344, 606, 771, 1098, 1299
BfmI CTRYAG 1 cut(s) 1293
BfuAI ACCTGC 1 cut(s) 603
BlnI CCTAGG 1 cut(s) 1097
BlpI GCTNAGC 1 cut(s) 314
BmcAI AGTACT 1 cut(s) 1288
Bme1390I CCNGG 4 cut(s) 245, 662, 663, 939
Bme18I GGWCC 4 cut(s) 95, 258, 665, 1185
BmeRI GACNNNNNGTC 2 cut(s) 52, 336
BmeT110I CYCGRG 3 cut(s) 34, 280, 661
BmgT120I GGNCC 7 cut(s) 95, 258, 302, 658, 659, 665, 1185
BmiI GGNNCC 6 cut(s) 96, 97, 660, 666, 681, 961
BmrFI CCNGG 4 cut(s) 245, 662, 663, 939
BmrI ACTGGG 1 cut(s) 1150
BmuI ACTGGG 1 cut(s) 1150
BpiI GAAGAC 1 cut(s) 624
BplI GAGNNNNNCTC 2 cut(s) 65, 97
BpmI CTGGAG 1 cut(s) 1292
Bpu10I CCTNAGC 1 cut(s) 909
Bpu1102I GCTNAGC 1 cut(s) 314
BpuEI CTTGAG 1 cut(s) 957
BpuMI CCSGG 3 cut(s) 662, 663, 939
BsaI GGTCTC 1 cut(s) 703
BsaJI CCNNGG 5 cut(s) 549, 661, 1015, 1062, 1097
BsaWI WCCGGW 1 cut(s) 8
BsaXI ACNNNNNCTCC 2 cut(s) 339, 369
Bsc4I CCNNNNNNNGG 6 cut(s) 244, 250, 550, 938, 944, 1194
Bse1I ACTGG 1 cut(s) 1145
Bse3DI GCAATG 1 cut(s) 1174
BseBI CCWGG 1 cut(s) 245
BseDI CCNNGG 5 cut(s) 549, 661, 1015, 1062, 1097
BseGI GGATG 3 cut(s) 169, 413, 1072
BseLI CCNNNNNNNGG 6 cut(s) 244, 250, 550, 938, 944, 1194
BseMI GCAATG 1 cut(s) 1174
BseMII CTCAG 6 cut(s) 260, 328, 419, 836, 923, 1172
BseNI ACTGG 1 cut(s) 1145
BseRI GAGGAG 4 cut(s) 227, 847, 850, 952
BseSI GKGCMC 2 cut(s) 508, 662
BseXI GCAGC 6 cut(s) 916, 1042, 1045, 1099, 1102, 1279
BseYI CCCAGC 2 cut(s) 91, 1259
BsgI GTGCAG 3 cut(s) 561, 1049, 1286
Bsh1236I CGCG 3 cut(s) 69, 71, 1226
BshFI GGCC 4 cut(s) 86, 303, 660, 1074
BsiHKAI GWGCWC 2 cut(s) 315, 508
BsiHKCI CYCGRG 3 cut(s) 34, 280, 661
BsiSI CCGG 3 cut(s) 9, 662, 939
BsiWI CGTACG 2 cut(s) 57, 1076
BslFI GGGAC 2 cut(s) 81, 871
BslI CCNNNNNNNGG 6 cut(s) 244, 250, 550, 938, 944, 1194
BsmAI GTCTC 3 cut(s) 703, 825, 975
BsmFI GGGAC 2 cut(s) 81, 871
BsnI GGCC 4 cut(s) 86, 303, 660, 1074
Bso31I GGTCTC 1 cut(s) 703
BsoBI CYCGRG 3 cut(s) 34, 280, 661
Bsp120I GGGCCC 1 cut(s) 658
Bsp1286I GDGCHC 3 cut(s) 315, 508, 662
Bsp143I GATC 8 cut(s) 78, 272, 292, 408, 653, 679, 997, 1174
Bsp1720I GCTNAGC 1 cut(s) 314
Bsp19I CCATGG 2 cut(s) 549, 1015
BspANI GGCC 4 cut(s) 86, 303, 660, 1074
BspCNI CTCAG 6 cut(s) 261, 327, 418, 835, 922, 1173
BspFNI CGCG 3 cut(s) 69, 71, 1226
BspLI GGNNCC 6 cut(s) 96, 97, 660, 666, 681, 961
BspMI ACCTGC 1 cut(s) 603
BspPI GGATC 4 cut(s) 267, 403, 674, 687
BspQI GCTCTTC 1 cut(s) 1339
BspTNI GGTCTC 1 cut(s) 703
BsrBI CCGCTC 1 cut(s) 39
BsrDI GCAATG 1 cut(s) 1174
BsrI ACTGG 1 cut(s) 1145
BssECI CCNNGG 5 cut(s) 549, 661, 1015, 1062, 1097
BssMI GATC 8 cut(s) 78, 272, 292, 408, 653, 679, 997, 1174
BssT1I CCWWGG 3 cut(s) 549, 1015, 1097
Bst2UI CCWGG 1 cut(s) 245
Bst4CI ACNGT 3 cut(s) 517, 819, 1205
Bst6I CTCTTC 3 cut(s) 696, 868, 1339
BstC8I GCNNGC 1 cut(s) 504
BstDEI CTNAG 6 cut(s) 269, 314, 405, 822, 909, 1181
BstDSI CCRYGG 2 cut(s) 549, 1015
BstF5I GGATG 3 cut(s) 169, 413, 1072
BstFNI CGCG 3 cut(s) 69, 71, 1226
BstHHI GCGC 1 cut(s) 71
BstKTI GATC 8 cut(s) 81, 275, 295, 411, 656, 682, 1000, 1177
BstMAI GTCTC 3 cut(s) 703, 825, 975
BstMBI GATC 8 cut(s) 78, 272, 292, 408, 653, 679, 997, 1174
BstMWI GCNNNNNNNGC 8 cut(s) 139, 378, 381, 725, 910, 1027, 1087, 1099
BstNI CCWGG 1 cut(s) 245
BstNSI RCATGY 1 cut(s) 850
BstSCI CCNGG 4 cut(s) 243, 660, 661, 937
BstSFI CTRYAG 1 cut(s) 1293
BstSLI GKGCMC 2 cut(s) 508, 662
BstUI CGCG 3 cut(s) 69, 71, 1226
BstV1I GCAGC 6 cut(s) 916, 1042, 1045, 1099, 1102, 1279
BstV2I GAAGAC 1 cut(s) 624
BstX2I RGATCY 3 cut(s) 272, 408, 679
BstYI RGATCY 3 cut(s) 272, 408, 679
BsuRI GGCC 4 cut(s) 86, 303, 660, 1074
BtgI CCRYGG 2 cut(s) 549, 1015
BtsCI GGATG 3 cut(s) 169, 413, 1072
BveI ACCTGC 1 cut(s) 603
Cac8I GCNNGC 1 cut(s) 504
CfoI GCGC 1 cut(s) 71
Cfr13I GGNCC 7 cut(s) 95, 258, 302, 658, 659, 665, 1185
Cfr9I CCCGGG 1 cut(s) 661
CseI GACGC 2 cut(s) 274, 483
Csp6I GTAC 4 cut(s) 58, 137, 1077, 1287
CviAII CATG 8 cut(s) 103, 176, 250, 550, 838, 847, 1016, 1323
CviQI GTAC 4 cut(s) 58, 137, 1077, 1287
DdeI CTNAG 6 cut(s) 269, 314, 405, 822, 909, 1181
DpnI GATC 8 cut(s) 80, 274, 294, 410, 655, 681, 999, 1176
DpnII GATC 8 cut(s) 78, 272, 292, 408, 653, 679, 997, 1174
DrdI GACNNNNNNGTC 1 cut(s) 1169
DriI GACNNNNNGTC 2 cut(s) 52, 336
DseDI GACNNNNNNGTC 1 cut(s) 1169
EaeI YGGCCR 1 cut(s) 1072
Eam1104I CTCTTC 3 cut(s) 696, 868, 1339
Eam1105I GACNNNNNGTC 2 cut(s) 52, 336
EarI CTCTTC 3 cut(s) 696, 868, 1339
EciI GGCGGA 1 cut(s) 399
Ecl136II GAGCTC 1 cut(s) 313
Eco130I CCWWGG 3 cut(s) 549, 1015, 1097
Eco24I GRGCYC 2 cut(s) 315, 662
Eco31I GGTCTC 1 cut(s) 703
Eco47I GGWCC 4 cut(s) 95, 258, 665, 1185
Eco53kI GAGCTC 1 cut(s) 313
Eco57I CTGAAG 2 cut(s) 1067, 1320
Eco88I CYCGRG 3 cut(s) 34, 280, 661
EcoICRI GAGCTC 1 cut(s) 313
EcoO109I RGGNCCY 1 cut(s) 95
EcoRII CCWGG 1 cut(s) 243
EcoT14I CCWWGG 3 cut(s) 549, 1015, 1097
EcoT38I GRGCYC 2 cut(s) 315, 662
ErhI CCWWGG 3 cut(s) 549, 1015, 1097
FaeI CATG 8 cut(s) 106, 179, 253, 553, 841, 850, 1019, 1326
FaqI GGGAC 2 cut(s) 81, 871
FatI CATG 8 cut(s) 102, 175, 249, 549, 837, 846, 1015, 1322
FauNDI CATATG 1 cut(s) 675
FokI GGATG 3 cut(s) 156, 400, 1079
FriOI GRGCYC 2 cut(s) 315, 662
FspBI CTAG 5 cut(s) 344, 606, 771, 1098, 1299
GlaI GCGC 1 cut(s) 70
GsaI CCCAGC 2 cut(s) 95, 1263
GsuI CTGGAG 1 cut(s) 1292
HaeIII GGCC 4 cut(s) 86, 303, 660, 1074
HapII CCGG 3 cut(s) 9, 662, 939
HgaI GACGC 2 cut(s) 274, 483
HhaI GCGC 1 cut(s) 71
Hin1II CATG 8 cut(s) 106, 179, 253, 553, 841, 850, 1019, 1326
Hin6I GCGC 1 cut(s) 69
HinP1I GCGC 1 cut(s) 69
HincII GTYRAC 2 cut(s) 341, 1147
HindII GTYRAC 2 cut(s) 341, 1147
HinfI GANTC 8 cut(s) 5, 53, 62, 74, 209, 670, 826, 1319
HpaII CCGG 3 cut(s) 9, 662, 939
HphI GGTGA 1 cut(s) 514
Hpy166II GTNNAC 3 cut(s) 341, 506, 1147
Hpy188III TCNNGA 2 cut(s) 489, 557
Hpy8I GTNNAC 3 cut(s) 341, 506, 1147
Hpy99I CGWCG 9 cut(s) 50, 53, 455, 499, 1057, 1060, 1132, 1166, 1243
HpyAV CCTTC 3 cut(s) 693, 750, 1301
HpyCH4III ACNGT 3 cut(s) 517, 819, 1205
HpyCH4IV ACGT 1 cut(s) 450
HpyCH4V TGCA 6 cut(s) 28, 506, 578, 850, 1030, 1267
HpyF10VI GCNNNNNNNGC 8 cut(s) 139, 378, 381, 725, 910, 1027, 1087, 1099
HpyF3I CTNAG 6 cut(s) 269, 314, 405, 822, 909, 1181
HpySE526I ACGT 1 cut(s) 450
Hsp92II CATG 8 cut(s) 106, 179, 253, 553, 841, 850, 1019, 1326
HspAI GCGC 1 cut(s) 69
KflI GGGWCCC 1 cut(s) 95
Kzo9I GATC 8 cut(s) 78, 272, 292, 408, 653, 679, 997, 1174
LguI GCTCTTC 1 cut(s) 1339
LmnI GCTCC 3 cut(s) 430, 733, 965
Lsp1109I GCAGC 6 cut(s) 916, 1042, 1045, 1099, 1102, 1279
MaeI CTAG 5 cut(s) 344, 606, 771, 1098, 1299
MaeII ACGT 1 cut(s) 450
MaeIII GTNAC 1 cut(s) 11
MalI GATC 8 cut(s) 80, 274, 294, 410, 655, 681, 999, 1176
MbiI CCGCTC 1 cut(s) 39
MboI GATC 8 cut(s) 78, 272, 292, 408, 653, 679, 997, 1174
MflI RGATCY 3 cut(s) 272, 408, 679
MhlI GDGCHC 3 cut(s) 315, 508, 662
MluCI AATT 5 cut(s) 560, 775, 877, 916, 1198
MlyI GAGTC 4 cut(s) 56, 62, 83, 835
MmeI TCCRAC 3 cut(s) 222, 300, 597
MseI TTAA 1 cut(s) 1342
MslI CAYNNNNRTG 1 cut(s) 174
MspA1I CMGCKG 2 cut(s) 18, 1270
MspI CCGG 3 cut(s) 9, 662, 939
MspR9I CCNGG 4 cut(s) 245, 662, 663, 939
MvaI CCWGG 1 cut(s) 245
MvnI CGCG 3 cut(s) 69, 71, 1226
MwoI GCNNNNNNNGC 8 cut(s) 139, 378, 381, 725, 910, 1027, 1087, 1099
NciI CCSGG 3 cut(s) 662, 663, 939
NcoI CCATGG 2 cut(s) 549, 1015
NdeI CATATG 1 cut(s) 675
NdeII GATC 8 cut(s) 78, 272, 292, 408, 653, 679, 997, 1174
NlaIII CATG 8 cut(s) 106, 179, 253, 553, 841, 850, 1019, 1326
NlaIV GGNNCC 6 cut(s) 96, 97, 660, 666, 681, 961
NmeAIII GCCGAG 1 cut(s) 62
NspI RCATGY 1 cut(s) 850
PaeR7I CTCGAG 1 cut(s) 34
PciSI GCTCTTC 1 cut(s) 1339
PcsI WCGNNNNNNNCGW 6 cut(s) 57, 425, 456, 494, 1127, 1170
PfeI GAWTC 4 cut(s) 5, 209, 670, 1319
Pfl23II CGTACG 2 cut(s) 57, 1076
PleI GAGTC 4 cut(s) 56, 61, 82, 834
PpsI GAGTC 4 cut(s) 56, 61, 82, 834
PpuMI RGGWCCY 1 cut(s) 95
Psp124BI GAGCTC 1 cut(s) 315
Psp5II RGGWCCY 1 cut(s) 95
Psp6I CCWGG 1 cut(s) 243
PspFI CCCAGC 2 cut(s) 91, 1259
PspGI CCWGG 1 cut(s) 243
PspLI CGTACG 2 cut(s) 57, 1076
PspN4I GGNNCC 6 cut(s) 96, 97, 660, 666, 681, 961
PspOMI GGGCCC 1 cut(s) 658
PspPI GGNCC 7 cut(s) 95, 258, 302, 658, 659, 665, 1185
PspPPI RGGWCCY 1 cut(s) 95
PspXI VCTCGAGB 1 cut(s) 34
PsuI RGATCY 3 cut(s) 272, 408, 679
PvuII CAGCTG 1 cut(s) 1270
RsaI GTAC 4 cut(s) 59, 138, 1078, 1288
RsaNI GTAC 4 cut(s) 58, 137, 1077, 1287
RseI CAYNNNNRTG 1 cut(s) 174
SacI GAGCTC 1 cut(s) 315
SapI GCTCTTC 1 cut(s) 1339
SaqAI TTAA 1 cut(s) 1342
Sau3AI GATC 8 cut(s) 78, 272, 292, 408, 653, 679, 997, 1174
Sau96I GGNCC 7 cut(s) 95, 258, 302, 658, 659, 665, 1185
ScaI AGTACT 1 cut(s) 1288
SchI GAGTC 4 cut(s) 56, 62, 83, 835
ScrFI CCNGG 4 cut(s) 245, 662, 663, 939
SduI GDGCHC 3 cut(s) 315, 508, 662
SfcI CTRYAG 1 cut(s) 1293
Sfr274I CTCGAG 1 cut(s) 34
SinI GGWCC 4 cut(s) 95, 258, 665, 1185
SlaI CTCGAG 1 cut(s) 34
SmaI CCCGGG 1 cut(s) 663
SmiMI CAYNNNNRTG 1 cut(s) 174
SmlI CTYRAG 2 cut(s) 34, 972
SmoI CTYRAG 2 cut(s) 34, 972
Sse9I AATT 5 cut(s) 560, 775, 877, 916, 1198
SspI AATATT 2 cut(s) 796, 952
SspMI CTAG 5 cut(s) 344, 606, 771, 1098, 1299
SstI GAGCTC 1 cut(s) 315
StyD4I CCNGG 4 cut(s) 243, 660, 661, 937
StyI CCWWGG 3 cut(s) 549, 1015, 1097
TaaI ACNGT 3 cut(s) 517, 819, 1205
TaiI ACGT 1 cut(s) 453
TasI AATT 5 cut(s) 560, 775, 877, 916, 1198
TatI WGTACW 1 cut(s) 1286
TauI GCSGC 8 cut(s) 42, 45, 375, 378, 381, 384, 459, 1229
TfiI GAWTC 4 cut(s) 5, 209, 670, 1319
Tru1I TTAA 1 cut(s) 1342
Tru9I TTAA 1 cut(s) 1342
TseI GCWGC 6 cut(s) 904, 1030, 1033, 1087, 1090, 1267
TspDTI ATGAA 4 cut(s) 630, 854, 855, 1151
TspGWI ACGGA 1 cut(s) 1177
TspMI CCCGGG 1 cut(s) 661
VneI GTGCAC 1 cut(s) 504
VpaK11BI GGWCC 4 cut(s) 95, 258, 665, 1185
XapI RAATTY 3 cut(s) 560, 877, 916
XceI RCATGY 1 cut(s) 850
XhoI CTCGAG 1 cut(s) 34
XmaI CCCGGG 1 cut(s) 661
XmaJI CCTAGG 1 cut(s) 1097
XspI CTAG 5 cut(s) 344, 606, 771, 1098, 1299
ZrmI AGTACT 1 cut(s) 1288
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.