Rh2DG258200

VQ motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0012018
Physical Location & Seq
Reverse (-)
27611609 .. 27616858
5250 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG258200.1

Sequence Viewer

Length: 1359 bp
ATGGATTCCGGTAACAGCGGAAGTATGCAGTCCTCGAGTGGCGGCGACGACGAGTCGTACGACTCACGCGCGGAGTCGATCTCGGCCTTGCTGGGTCCCGCCATGACTAACCACCACCACCACCACCACCCACCGCAAGTACCGCAACAACAACAACAACACCACCGCCATCATCCTCATGTTGAGTTCGACACCTTATCCAACATCTTCGATTCAAGGCTCACAAACCCGAACCCGCTCCTCAACCTCGACATGGTGTGGTCCAAGACGCTGAGATCCGACCCGAGTATGTCCGATCTTGGCGGCCAGAACGAGCTCAGCCAATCCTTTTTGACCAATAGTCAACTAGGAGGACAAGTCAGCAGAACAGGAGTCGGCGGCGGCGGAGGAGGGTCATCTACTTTTACTCAGATCCCATCCTCGTCAGCTCCGAACGACCAGACCAACAACAACAACAACAACGTCGGCGGCGTTCGGAACAGCAACCCAAAAAAGAGGTCGAGAGCGTCGAGGCGTGCACCCACTACGGTTCTCACCACAGACACAACAAACTTCCGAGCCATGGTTCAAGAATTTACAGGTATTCCTGCACCCCCATTTACGAGTTCGCCTTTTCCTAGAAGCAGGTTGGATTTGTTCGGGTCTTCGGCTTCATCTATGGTTAGATCGGGCCCGGGTCCCAATCATATGGATCCTTCTTCTCTTCCTCCTTATCTGTTGAGACCATTTGCTCATAAAGCTCCACTACTACCTTCTCCTCCATCTCCATCTTTGTTGCCCTCTAGTAATTCAAATACTAATAGTAATATTGGTGGTTCTAATCTACAACAGTCTCAGAGTCTTTTGAACATGAACAACATGCAAAACTCCTCCTCTTCATCAGTTCTGAATTTTCAGTCCCTCTTTCAAAACCAGCAGCCTCAGCCGAATTTACCAAAATACCCATTACCCGGTTCAGGCAATATTCTTGGCTCCTCCAAGTCTCAAGGCTCTTTGGGTGTGCTTGAAGATCAGTTTGGTTTGAGCCATGGGCTAAATGTGCAGCAGCTTCCTAACATCGTGTCGTCGTCGTCCTCGGATGGTGGCCGTACGCTTCAGCAGCAGCAACCTAGGCACGACAATAACCAGAGGACGACAACGACGACAATGAACTGGGTTGACAACAACAACAAGAACGACGGCAATGTCGATCTTCTGAGGTCCGTCAATGGGAATTACAGTAATGGCAAACTAAACTACGCGGCTTCTTCTTCGTCGAATGTTGTCGATAAAGCTGGGGTGCAGCTGGAGAATAATGTGAGTACTACTACAGCTAGAAGTGAAGGTATGGTGGAATCATGGATTTGCTCTTCAGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VQ

Protein Analysis

452

Amino Acids

48.41

Weight (kDa)

6.95

Isoelectric Point (pI)

67.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VQ PF05678 172 - 199 1.2e-11 VQ motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012018)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G65170 AT5G65170
fragaria_vesca FvH4_1g21110
malus_domestica MD01G1027700.v1.1 MD15G1325900.v1.1
prunus_persica Prupe.6G183200_v2.0.a1 Prupe.6G183200_v2.0.a1
pyrus_communis pycom01g05580 pycom15g28700
rosa_chinensis RchiOBHm_Chr2g0114891
rosa_laevigata RLG00000018131
rosa_multiflora Rmu_sc0002764.1_g000028
rosa_roxburghii Rroxscaffold_2G00130390
rosa_rugosa Rorug02G0191400
rosa_samantha Rh2AG250000 Rh2BG259600 Rh2CG254400 Rh2DG258200
rosa_wichuraiana Rw2G019500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1184
Acc36I ACCTGC 1 cut(s) 615
AccBSI CCGCTC 1 cut(s) 238
AccII CGCG 3 cut(s) 69, 71, 1241
AclWI GGATC 4 cut(s) 270, 406, 686, 699
AcoI YGGCCR 2 cut(s) 304, 1084
AcsI RAATTY 3 cut(s) 572, 889, 928
AcuI CTGAAG 2 cut(s) 1079, 1335
AfaI GTAC 4 cut(s) 59, 141, 1090, 1303
AfiI CCNNNNNNNGG 5 cut(s) 253, 562, 950, 956, 1209
AgsI TTSAA 6 cut(s) 216, 569, 792, 847, 908, 1007
AhdI GACNNNNNGTC 2 cut(s) 52, 339
AjuI GAANNNNNNNTTGG 2 cut(s) 999, 1031
AluBI AGCT 7 cut(s) 316, 428, 740, 1048, 1274, 1285, 1313
AluI AGCT 7 cut(s) 316, 428, 740, 1048, 1274, 1285, 1313
Alw21I GWGCWC 2 cut(s) 318, 520
Alw26I GTCTC 3 cut(s) 715, 837, 987
Alw44I GTGCAC 1 cut(s) 516
AlwI GGATC 4 cut(s) 270, 406, 686, 699
Ama87I CYCGRG 3 cut(s) 34, 283, 673
AoxI GGCC 4 cut(s) 84, 304, 670, 1084
ApaI GGGCCC 1 cut(s) 674
ApaLI GTGCAC 1 cut(s) 516
ApeKI GCWGC 6 cut(s) 916, 1042, 1045, 1099, 1102, 1282
ApoI RAATTY 3 cut(s) 572, 889, 928
ArsI GACNNNNNNTTYG 2 cut(s) 482, 514
AspA2I CCTAGG 1 cut(s) 1109
AspLEI GCGC 1 cut(s) 71
AspS9I GGNCC 6 cut(s) 95, 261, 670, 671, 677, 1200
AsuC2I CCSGG 3 cut(s) 674, 675, 951
AsuHPI GGTGA 1 cut(s) 526
AvaI CYCGRG 3 cut(s) 34, 283, 673
AvaII GGWCC 4 cut(s) 95, 261, 677, 1200
AvrII CCTAGG 1 cut(s) 1109
BaeGI GKGCMC 2 cut(s) 520, 674
BamHI GGATCC 1 cut(s) 691
BanII GRGCYC 2 cut(s) 318, 674
BbsI GAAGAC 1 cut(s) 636
Bbv12I GWGCWC 2 cut(s) 318, 520
BbvCI CCTCAGC 1 cut(s) 921
BbvI GCAGC 6 cut(s) 928, 1054, 1057, 1111, 1114, 1294
BccI CCATC 5 cut(s) 177, 424, 769, 775, 1073
BceAI ACGGC 2 cut(s) 1071, 1195
BcnI CCSGG 3 cut(s) 674, 675, 951
BcoDI GTCTC 3 cut(s) 715, 837, 987
BfaI CTAG 5 cut(s) 347, 618, 783, 1110, 1314
BfmI CTRYAG 1 cut(s) 1308
BfuAI ACCTGC 1 cut(s) 615
BlnI CCTAGG 1 cut(s) 1109
BlpI GCTNAGC 1 cut(s) 317
BmcAI AGTACT 1 cut(s) 1303
Bme1390I CCNGG 3 cut(s) 674, 675, 951
Bme18I GGWCC 4 cut(s) 95, 261, 677, 1200
BmeRI GACNNNNNGTC 2 cut(s) 52, 339
BmeT110I CYCGRG 3 cut(s) 34, 283, 673
BmgT120I GGNCC 6 cut(s) 95, 261, 670, 671, 677, 1200
BmiI GGNNCC 7 cut(s) 96, 97, 672, 678, 679, 693, 973
BmrFI CCNGG 3 cut(s) 674, 675, 951
BmrI ACTGGG 1 cut(s) 1162
BmuI ACTGGG 1 cut(s) 1162
BpiI GAAGAC 1 cut(s) 636
BplI GAGNNNNNCTC 2 cut(s) 65, 97
BpmI CTGGAG 1 cut(s) 1307
Bpu10I CCTNAGC 1 cut(s) 921
Bpu1102I GCTNAGC 1 cut(s) 317
BpuEI CTTGAG 1 cut(s) 969
BpuMI CCSGG 3 cut(s) 674, 675, 951
BsaI GGTCTC 1 cut(s) 715
BsaJI CCNNGG 5 cut(s) 561, 673, 1027, 1074, 1109
BsaWI WCCGGW 1 cut(s) 8
BsaXI ACNNNNNCTCC 2 cut(s) 342, 372
Bsc4I CCNNNNNNNGG 5 cut(s) 253, 562, 950, 956, 1209
Bse1I ACTGG 1 cut(s) 1157
Bse3DI GCAATG 1 cut(s) 1189
BseDI CCNNGG 5 cut(s) 561, 673, 1027, 1074, 1109
BseGI GGATG 3 cut(s) 172, 416, 1084
BseLI CCNNNNNNNGG 5 cut(s) 253, 562, 950, 956, 1209
BseMI GCAATG 1 cut(s) 1189
BseMII CTCAG 6 cut(s) 263, 331, 422, 848, 935, 1187
BseNI ACTGG 1 cut(s) 1157
BseRI GAGGAG 6 cut(s) 230, 402, 747, 859, 862, 964
BseSI GKGCMC 2 cut(s) 520, 674
BseXI GCAGC 6 cut(s) 928, 1054, 1057, 1111, 1114, 1294
BseYI CCCAGC 2 cut(s) 91, 1274
BsgI GTGCAG 3 cut(s) 573, 1061, 1301
Bsh1236I CGCG 3 cut(s) 69, 71, 1241
BshFI GGCC 4 cut(s) 86, 306, 672, 1086
BsiHKAI GWGCWC 2 cut(s) 318, 520
BsiHKCI CYCGRG 3 cut(s) 34, 283, 673
BsiSI CCGG 3 cut(s) 9, 674, 951
BsiWI CGTACG 2 cut(s) 57, 1088
BslFI GGGAC 3 cut(s) 81, 663, 883
BslI CCNNNNNNNGG 5 cut(s) 253, 562, 950, 956, 1209
BsmAI GTCTC 3 cut(s) 715, 837, 987
BsmFI GGGAC 3 cut(s) 81, 663, 883
BsnI GGCC 4 cut(s) 86, 306, 672, 1086
Bso31I GGTCTC 1 cut(s) 715
BsoBI CYCGRG 3 cut(s) 34, 283, 673
Bsp120I GGGCCC 1 cut(s) 670
Bsp1286I GDGCHC 3 cut(s) 318, 520, 674
Bsp143I GATC 8 cut(s) 78, 275, 295, 411, 665, 691, 1009, 1189
Bsp1720I GCTNAGC 1 cut(s) 317
Bsp19I CCATGG 2 cut(s) 561, 1027
BspANI GGCC 4 cut(s) 86, 306, 672, 1086
BspCNI CTCAG 6 cut(s) 264, 330, 421, 847, 934, 1188
BspFNI CGCG 3 cut(s) 69, 71, 1241
BspLI GGNNCC 7 cut(s) 96, 97, 672, 678, 679, 693, 973
BspMI ACCTGC 1 cut(s) 615
BspPI GGATC 4 cut(s) 270, 406, 686, 699
BspQI GCTCTTC 1 cut(s) 1354
BspTNI GGTCTC 1 cut(s) 715
BsrBI CCGCTC 1 cut(s) 238
BsrDI GCAATG 1 cut(s) 1189
BsrI ACTGG 1 cut(s) 1157
BssECI CCNNGG 5 cut(s) 561, 673, 1027, 1074, 1109
BssMI GATC 8 cut(s) 78, 275, 295, 411, 665, 691, 1009, 1189
BssT1I CCWWGG 3 cut(s) 561, 1027, 1109
Bst4CI ACNGT 3 cut(s) 529, 831, 1220
Bst6I CTCTTC 3 cut(s) 708, 880, 1354
BstC8I GCNNGC 1 cut(s) 516
BstDEI CTNAG 6 cut(s) 272, 317, 408, 834, 921, 1196
BstDSI CCRYGG 2 cut(s) 561, 1027
BstF5I GGATG 3 cut(s) 172, 416, 1084
BstFNI CGCG 3 cut(s) 69, 71, 1241
BstHHI GCGC 1 cut(s) 71
BstKTI GATC 8 cut(s) 81, 278, 298, 414, 668, 694, 1012, 1192
BstMAI GTCTC 3 cut(s) 715, 837, 987
BstMBI GATC 8 cut(s) 78, 275, 295, 411, 665, 691, 1009, 1189
BstMWI GCNNNNNNNGC 6 cut(s) 142, 737, 922, 1039, 1099, 1111
BstNSI RCATGY 1 cut(s) 862
BstSCI CCNGG 3 cut(s) 672, 673, 949
BstSFI CTRYAG 1 cut(s) 1308
BstSLI GKGCMC 2 cut(s) 520, 674
BstUI CGCG 3 cut(s) 69, 71, 1241
BstV1I GCAGC 6 cut(s) 928, 1054, 1057, 1111, 1114, 1294
BstV2I GAAGAC 1 cut(s) 636
BstX2I RGATCY 3 cut(s) 275, 411, 691
BstXI CCANNNNNNTGG 1 cut(s) 688
BstYI RGATCY 3 cut(s) 275, 411, 691
BsuRI GGCC 4 cut(s) 86, 306, 672, 1086
BtgI CCRYGG 2 cut(s) 561, 1027
BtsCI GGATG 3 cut(s) 172, 416, 1084
BveI ACCTGC 1 cut(s) 615
Cac8I GCNNGC 1 cut(s) 516
CfoI GCGC 1 cut(s) 71
Cfr13I GGNCC 6 cut(s) 95, 261, 670, 671, 677, 1200
Cfr9I CCCGGG 1 cut(s) 673
CseI GACGC 2 cut(s) 277, 495
Csp6I GTAC 4 cut(s) 58, 140, 1089, 1302
CviAII CATG 8 cut(s) 103, 179, 253, 562, 850, 859, 1028, 1338
CviQI GTAC 4 cut(s) 58, 140, 1089, 1302
DdeI CTNAG 6 cut(s) 272, 317, 408, 834, 921, 1196
DpnI GATC 8 cut(s) 80, 277, 297, 413, 667, 693, 1011, 1191
DpnII GATC 8 cut(s) 78, 275, 295, 411, 665, 691, 1009, 1189
DrdI GACNNNNNNGTC 1 cut(s) 1184
DriI GACNNNNNGTC 2 cut(s) 52, 339
DseDI GACNNNNNNGTC 1 cut(s) 1184
EaeI YGGCCR 2 cut(s) 304, 1084
Eam1104I CTCTTC 3 cut(s) 708, 880, 1354
Eam1105I GACNNNNNGTC 2 cut(s) 52, 339
EarI CTCTTC 3 cut(s) 708, 880, 1354
EciI GGCGGA 1 cut(s) 399
Ecl136II GAGCTC 1 cut(s) 316
Eco130I CCWWGG 3 cut(s) 561, 1027, 1109
Eco24I GRGCYC 2 cut(s) 318, 674
Eco31I GGTCTC 1 cut(s) 715
Eco47I GGWCC 4 cut(s) 95, 261, 677, 1200
Eco53kI GAGCTC 1 cut(s) 316
Eco57I CTGAAG 2 cut(s) 1079, 1335
Eco88I CYCGRG 3 cut(s) 34, 283, 673
EcoICRI GAGCTC 1 cut(s) 316
EcoO109I RGGNCCY 2 cut(s) 95, 677
EcoT14I CCWWGG 3 cut(s) 561, 1027, 1109
EcoT38I GRGCYC 2 cut(s) 318, 674
ErhI CCWWGG 3 cut(s) 561, 1027, 1109
FaeI CATG 8 cut(s) 106, 182, 256, 565, 853, 862, 1031, 1341
FaqI GGGAC 3 cut(s) 81, 663, 883
FatI CATG 8 cut(s) 102, 178, 252, 561, 849, 858, 1027, 1337
FauI CCCGC 2 cut(s) 106, 243
FauNDI CATATG 1 cut(s) 687
FokI GGATG 3 cut(s) 159, 403, 1091
FriOI GRGCYC 2 cut(s) 318, 674
FspBI CTAG 5 cut(s) 347, 618, 783, 1110, 1314
GlaI GCGC 1 cut(s) 70
GsaI CCCAGC 2 cut(s) 95, 1278
GsuI CTGGAG 1 cut(s) 1307
HaeIII GGCC 4 cut(s) 86, 306, 672, 1086
HapII CCGG 3 cut(s) 9, 674, 951
HgaI GACGC 2 cut(s) 277, 495
HhaI GCGC 1 cut(s) 71
Hin1II CATG 8 cut(s) 106, 182, 256, 565, 853, 862, 1031, 1341
Hin6I GCGC 1 cut(s) 69
HinP1I GCGC 1 cut(s) 69
HincII GTYRAC 2 cut(s) 344, 1159
HindII GTYRAC 2 cut(s) 344, 1159
HinfI GANTC 8 cut(s) 5, 53, 62, 74, 212, 372, 838, 1334
HpaII CCGG 3 cut(s) 9, 674, 951
HphI GGTGA 1 cut(s) 526
Hpy166II GTNNAC 3 cut(s) 344, 518, 1159
Hpy188III TCNNGA 2 cut(s) 501, 569
Hpy8I GTNNAC 3 cut(s) 344, 518, 1159
Hpy99I CGWCG 9 cut(s) 50, 53, 467, 511, 1069, 1072, 1144, 1181, 1258
HpyAV CCTTC 3 cut(s) 705, 762, 1316
HpyCH4III ACNGT 3 cut(s) 529, 831, 1220
HpyCH4IV ACGT 1 cut(s) 462
HpyCH4V TGCA 6 cut(s) 28, 518, 590, 862, 1042, 1282
HpyF10VI GCNNNNNNNGC 6 cut(s) 142, 737, 922, 1039, 1099, 1111
HpyF3I CTNAG 6 cut(s) 272, 317, 408, 834, 921, 1196
HpySE526I ACGT 1 cut(s) 462
Hsp92II CATG 8 cut(s) 106, 182, 256, 565, 853, 862, 1031, 1341
HspAI GCGC 1 cut(s) 69
KflI GGGWCCC 2 cut(s) 95, 677
Kzo9I GATC 8 cut(s) 78, 275, 295, 411, 665, 691, 1009, 1189
LguI GCTCTTC 1 cut(s) 1354
LmnI GCTCC 4 cut(s) 243, 433, 745, 977
Lsp1109I GCAGC 6 cut(s) 928, 1054, 1057, 1111, 1114, 1294
MaeI CTAG 5 cut(s) 347, 618, 783, 1110, 1314
MaeII ACGT 1 cut(s) 462
MaeIII GTNAC 1 cut(s) 11
MalI GATC 8 cut(s) 80, 277, 297, 413, 667, 693, 1011, 1191
MbiI CCGCTC 1 cut(s) 238
MboI GATC 8 cut(s) 78, 275, 295, 411, 665, 691, 1009, 1189
MflI RGATCY 3 cut(s) 275, 411, 691
MhlI GDGCHC 3 cut(s) 318, 520, 674
MluCI AATT 5 cut(s) 572, 787, 889, 928, 1213
MlyI GAGTC 5 cut(s) 56, 62, 83, 381, 847
MmeI TCCRAC 3 cut(s) 225, 303, 609
MseI TTAA 1 cut(s) 1357
MslI CAYNNNNRTG 1 cut(s) 177
MspA1I CMGCKG 2 cut(s) 18, 1285
MspI CCGG 3 cut(s) 9, 674, 951
MspR9I CCNGG 3 cut(s) 674, 675, 951
MvnI CGCG 3 cut(s) 69, 71, 1241
MwoI GCNNNNNNNGC 6 cut(s) 142, 737, 922, 1039, 1099, 1111
NciI CCSGG 3 cut(s) 674, 675, 951
NcoI CCATGG 2 cut(s) 561, 1027
NdeI CATATG 1 cut(s) 687
NdeII GATC 8 cut(s) 78, 275, 295, 411, 665, 691, 1009, 1189
NlaIII CATG 8 cut(s) 106, 182, 256, 565, 853, 862, 1031, 1341
NlaIV GGNNCC 7 cut(s) 96, 97, 672, 678, 679, 693, 973
NmeAIII GCCGAG 1 cut(s) 62
NspI RCATGY 1 cut(s) 862
PaeR7I CTCGAG 1 cut(s) 34
PciSI GCTCTTC 1 cut(s) 1354
PcsI WCGNNNNNNNCGW 6 cut(s) 57, 428, 468, 506, 1139, 1185
PfeI GAWTC 3 cut(s) 5, 212, 1334
Pfl23II CGTACG 2 cut(s) 57, 1088
PleI GAGTC 5 cut(s) 56, 61, 82, 380, 846
PpsI GAGTC 5 cut(s) 56, 61, 82, 380, 846
PpuMI RGGWCCY 2 cut(s) 95, 677
Psp124BI GAGCTC 1 cut(s) 318
Psp5II RGGWCCY 2 cut(s) 95, 677
PspFI CCCAGC 2 cut(s) 91, 1274
PspLI CGTACG 2 cut(s) 57, 1088
PspN4I GGNNCC 7 cut(s) 96, 97, 672, 678, 679, 693, 973
PspOMI GGGCCC 1 cut(s) 670
PspPI GGNCC 6 cut(s) 95, 261, 670, 671, 677, 1200
PspPPI RGGWCCY 2 cut(s) 95, 677
PspXI VCTCGAGB 1 cut(s) 34
PsuI RGATCY 3 cut(s) 275, 411, 691
PvuII CAGCTG 1 cut(s) 1285
RsaI GTAC 4 cut(s) 59, 141, 1090, 1303
RsaNI GTAC 4 cut(s) 58, 140, 1089, 1302
RseI CAYNNNNRTG 1 cut(s) 177
SacI GAGCTC 1 cut(s) 318
SapI GCTCTTC 1 cut(s) 1354
SaqAI TTAA 1 cut(s) 1357
Sau3AI GATC 8 cut(s) 78, 275, 295, 411, 665, 691, 1009, 1189
Sau96I GGNCC 6 cut(s) 95, 261, 670, 671, 677, 1200
ScaI AGTACT 1 cut(s) 1303
SchI GAGTC 5 cut(s) 56, 62, 83, 381, 847
ScrFI CCNGG 3 cut(s) 674, 675, 951
SduI GDGCHC 3 cut(s) 318, 520, 674
SfcI CTRYAG 1 cut(s) 1308
Sfr274I CTCGAG 1 cut(s) 34
SinI GGWCC 4 cut(s) 95, 261, 677, 1200
SlaI CTCGAG 1 cut(s) 34
SmaI CCCGGG 1 cut(s) 675
SmiMI CAYNNNNRTG 1 cut(s) 177
SmlI CTYRAG 2 cut(s) 34, 984
SmoI CTYRAG 2 cut(s) 34, 984
Sse9I AATT 5 cut(s) 572, 787, 889, 928, 1213
SspI AATATT 2 cut(s) 808, 964
SspMI CTAG 5 cut(s) 347, 618, 783, 1110, 1314
SstI GAGCTC 1 cut(s) 318
StyD4I CCNGG 3 cut(s) 672, 673, 949
StyI CCWWGG 3 cut(s) 561, 1027, 1109
TaaI ACNGT 3 cut(s) 529, 831, 1220
TaiI ACGT 1 cut(s) 465
TasI AATT 5 cut(s) 572, 787, 889, 928, 1213
TatI WGTACW 1 cut(s) 1301
TauI GCSGC 6 cut(s) 45, 306, 381, 384, 471, 1244
TfiI GAWTC 3 cut(s) 5, 212, 1334
Tru1I TTAA 1 cut(s) 1357
Tru9I TTAA 1 cut(s) 1357
TseI GCWGC 6 cut(s) 916, 1042, 1045, 1099, 1102, 1282
TspDTI ATGAA 4 cut(s) 642, 866, 867, 1163
TspGWI ACGGA 1 cut(s) 1192
TspMI CCCGGG 1 cut(s) 673
VneI GTGCAC 1 cut(s) 516
VpaK11BI GGWCC 4 cut(s) 95, 261, 677, 1200
XapI RAATTY 3 cut(s) 572, 889, 928
XceI RCATGY 1 cut(s) 862
XhoI CTCGAG 1 cut(s) 34
XmaI CCCGGG 1 cut(s) 673
XmaJI CCTAGG 1 cut(s) 1109
XspI CTAG 5 cut(s) 347, 618, 783, 1110, 1314
ZrmI AGTACT 1 cut(s) 1303
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.