RLG00000018696

NAD-dependent protein deacylase. Catalyzes the NAD- dependent hydrolysis of acyl groups from lysine residues

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
34053804 .. 34059119
5316 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000018696

Sequence Viewer

Length: 1155 bp
ATGCTCATTCGCTTACCATTCTTTTCCGGTCCCAGAACTGCTAGAGAAATGAGGAATATCATGACAGATGTTATTCAATCAAGTAGCACAAATTGGCGATTACCAAGCAGTCAAAGAAGAGTCATTTCTTTTCGTAGCTCTGTGAAGTCTGTCCAAACCTCAACCCAAGTATCTGTCCCAGGCACTTCGTCGACGAGAGAAGGAAAAGTGCCTTCGAGCTTCTTGAGGGACAAGAAGTTGGCTCCTGATTCAGATCCGCCTAGCATGCAAGATGTCAACCTTTTGTATCAGTTTTTCGATCAAAGTACTAAGCTAGTGGTGTTGACTGGAGCTGGAATTAGCACAGAATGTGGTATTCCCGACTACAGAAGTCCAAATGGAGCTTACAGTTCTGGTTTCAAACCAATTACCCATCAGGAGTTTCTCCGCTCTAGTCGGGCTCGTAGGCGTTATTGGGCAAGGAGTTATGCTGGGTGGAGAAGATTTAATGCTGCGCAGCCCAGTGCAGCTCATATTGCTTTATCATCACTAGAAAAAGCTGGTCGGGTTAACTTGATGATTACGCAAAATGTTGATAGGTTGCATCACCGTGCTGGTAGCAATCCAGTTGAATTGCATGGAACTGTTTATTCCGTGATTTGTATAGATTGTGGTTTTTCCTTTTGCCGGCATATATTTCAGGATCAACTTAAGGCCCTTAATCCAAAGTGGGCAGAGGCAATCGAAAGTTTGGACTATGGCAACCCTGGATCAGACAAGAGCTTTGGCATGAAGCAAAGGCCTGATGGTGACATTGAGATTGATGAAAAATTTTGGGAGGAGAATTTTCACATCCCTACATGCCAAAAGTGCAATGGAGTGCTGAAGCCTGATGTTGTCTTCTTTGGTGACAATGTCCCCAAGGACAGAGCTGATAAGGCAATCCAAGCTGCAAAAGAATGTGATGCTTTTCTTGTACTAGGATCATCTGTAATGACCATGTCTGCTTTTCGACTTGTCAGAGCTGCACATGAGGCAGGTGCTGCCACTGCAATTGTAAATGTTGGAGTGACTCGAGCTGATAATTTTGTACCTTTGAAAATCAATGCTCGACTAGGAGAGATTTTGCCAAGAGTGCTTCACATGGGATCCCTCAGCGTCCCTGCGTCCAGGTGA

Protein Analysis

385

Amino Acids

42.59

Weight (kDa)

9.54

Isoelectric Point (pI)

44.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SIR2 PF02146 110 - 325 1.3e-41 Sir2 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1007
Acc16I TGCGCA 1 cut(s) 495
Acc36I ACCTGC 1 cut(s) 1007
AccBSI CCGCTC 1 cut(s) 429
AccI GTMKAC 1 cut(s) 191
AciI CCGC 2 cut(s) 257, 427
AclWI GGATC 6 cut(s) 248, 690, 757, 970, 1122, 1135
AcsI RAATTY 2 cut(s) 809, 823
AcuI CTGAAG 1 cut(s) 884
AfaI GTAC 3 cut(s) 307, 957, 1071
AfiI CCNNNNNNNGG 1 cut(s) 666
AflII CTTAAG 1 cut(s) 689
AgsI TTSAA 4 cut(s) 77, 400, 611, 1078
AjnI CCWGG 3 cut(s) 178, 745, 1148
AlwI GGATC 6 cut(s) 248, 690, 757, 970, 1122, 1135
AlwNI CAGNNNCTG 1 cut(s) 1022
Ama87I CYCGRG 1 cut(s) 1053
AoxI GGCC 2 cut(s) 693, 779
ApeKI GCWGC 6 cut(s) 491, 496, 506, 929, 1004, 1022
ApoI RAATTY 2 cut(s) 809, 823
ArsI GACNNNNNNTTYG 2 cut(s) 746, 778
AspLEI GCGC 1 cut(s) 496
AspS9I GGNCC 2 cut(s) 29, 694
AsuHPI GGTGA 3 cut(s) 578, 800, 899
AvaI CYCGRG 1 cut(s) 1053
AvaII GGWCC 1 cut(s) 29
BaeI ACNNNNGTAYC 2 cut(s) 153, 186
BamHI GGATCC 1 cut(s) 1127
BanII GRGCYC 1 cut(s) 442
BbsI GAAGAC 1 cut(s) 871
BbvCI CCTCAGC 1 cut(s) 1133
BbvI GCAGC 6 cut(s) 478, 508, 518, 916, 991, 1009
BccI CCATC 2 cut(s) 420, 779
BciT130I CCWGG 3 cut(s) 180, 747, 1150
BfaI CTAG 7 cut(s) 42, 261, 314, 432, 530, 959, 1094
BfmI CTRYAG 1 cut(s) 364
BfrI CTTAAG 1 cut(s) 689
BfuAI ACCTGC 1 cut(s) 1007
BisI GCNGC 6 cut(s) 492, 497, 507, 930, 1005, 1023
BlsI GCNGC 6 cut(s) 493, 498, 508, 931, 1006, 1024
BmcAI AGTACT 1 cut(s) 307
Bme1390I CCNGG 3 cut(s) 180, 747, 1150
Bme18I GGWCC 1 cut(s) 29
BmeT110I CYCGRG 1 cut(s) 1053
BmgT120I GGNCC 2 cut(s) 29, 694
BmiI GGNNCC 3 cut(s) 31, 243, 1129
BmrFI CCNGG 3 cut(s) 180, 747, 1150
BmrI ACTGGG 1 cut(s) 495
BmsI GCATC 2 cut(s) 592, 934
BmuI ACTGGG 1 cut(s) 495
BpiI GAAGAC 1 cut(s) 871
BpmI CTGGAG 1 cut(s) 348
Bpu10I CCTNAGC 1 cut(s) 1133
BpuEI CTTGAG 1 cut(s) 244
BsaBI GATNNNNATC 1 cut(s) 252
BsaJI CCNNGG 3 cut(s) 178, 745, 900
BsaWI WCCGGW 1 cut(s) 26
Bsc4I CCNNNNNNNGG 1 cut(s) 666
Bse118I RCCGGY 1 cut(s) 666
Bse1I ACTGG 3 cut(s) 331, 501, 605
Bse3DI GCAATG 1 cut(s) 859
Bse8I GATNNNNATC 1 cut(s) 252
BseBI CCWGG 3 cut(s) 180, 747, 1150
BseDI CCNNGG 3 cut(s) 178, 745, 900
BseGI GGATG 1 cut(s) 831
BseJI GATNNNNATC 1 cut(s) 252
BseLI CCNNNNNNNGG 1 cut(s) 666
BseMI GCAATG 1 cut(s) 859
BseMII CTCAG 1 cut(s) 1147
BseNI ACTGG 3 cut(s) 331, 501, 605
BseRI GAGGAG 1 cut(s) 833
BseXI GCAGC 6 cut(s) 478, 508, 518, 916, 991, 1009
BseYI CCCAGC 1 cut(s) 470
BsgI GTGCAG 2 cut(s) 525, 990
BshFI GGCC 2 cut(s) 695, 781
BsiHKCI CYCGRG 1 cut(s) 1053
BsiSI CCGG 2 cut(s) 27, 667
BslFI GGGAC 5 cut(s) 15, 161, 242, 881, 1124
BslI CCNNNNNNNGG 1 cut(s) 666
BsmFI GGGAC 5 cut(s) 15, 161, 242, 881, 1124
BsnI GGCC 2 cut(s) 695, 781
BsoBI CYCGRG 1 cut(s) 1053
Bsp1286I GDGCHC 1 cut(s) 442
Bsp143I GATC 6 cut(s) 253, 298, 682, 749, 962, 1127
BspACI CCGC 2 cut(s) 257, 427
BspANI GGCC 2 cut(s) 695, 781
BspCNI CTCAG 1 cut(s) 1146
BspHI TCATGA 1 cut(s) 60
BspLI GGNNCC 3 cut(s) 31, 243, 1129
BspMI ACCTGC 1 cut(s) 1007
BspPI GGATC 6 cut(s) 248, 690, 757, 970, 1122, 1135
BspTI CTTAAG 1 cut(s) 689
BsrBI CCGCTC 1 cut(s) 429
BsrDI GCAATG 1 cut(s) 859
BsrFI RCCGGY 1 cut(s) 666
BsrI ACTGG 3 cut(s) 331, 501, 605
BssAI RCCGGY 1 cut(s) 666
BssECI CCNNGG 3 cut(s) 178, 745, 900
BssMI GATC 6 cut(s) 253, 298, 682, 749, 962, 1127
BssT1I CCWWGG 1 cut(s) 900
Bst2UI CCWGG 3 cut(s) 180, 747, 1150
Bst4CI ACNGT 3 cut(s) 389, 590, 625
Bst6I CTCTTC 1 cut(s) 112
BstAFI CTTAAG 1 cut(s) 689
BstAPI GCANNNNNTGC 1 cut(s) 1022
BstC8I GCNNGC 2 cut(s) 266, 668
BstDEI CTNAG 2 cut(s) 309, 1133
BstF5I GGATG 1 cut(s) 831
BstHHI GCGC 1 cut(s) 496
BstKTI GATC 6 cut(s) 256, 301, 685, 752, 965, 1130
BstMBI GATC 6 cut(s) 253, 298, 682, 749, 962, 1127
BstMWI GCNNNNNNNGC 9 cut(s) 265, 515, 849, 917, 926, 1013, 1022, 1028, 1114
BstNI CCWGG 3 cut(s) 180, 747, 1150
BstNSI RCATGY 2 cut(s) 268, 843
BstSCI CCNGG 3 cut(s) 178, 745, 1148
BstSFI CTRYAG 1 cut(s) 364
BstV1I GCAGC 6 cut(s) 478, 508, 518, 916, 991, 1009
BstV2I GAAGAC 1 cut(s) 871
BstX2I RGATCY 2 cut(s) 253, 1127
BstYI RGATCY 2 cut(s) 253, 1127
BsuRI GGCC 2 cut(s) 695, 781
BtsCI GGATG 1 cut(s) 831
BtsI GCAGTG 1 cut(s) 1026
BtsIMutI CAGTG 2 cut(s) 508, 1026
BveI ACCTGC 1 cut(s) 1007
Cac8I GCNNGC 2 cut(s) 266, 668
CaiI CAGNNNCTG 1 cut(s) 1022
CciI TCATGA 1 cut(s) 60
CfoI GCGC 1 cut(s) 496
Cfr10I RCCGGY 1 cut(s) 666
Cfr13I GGNCC 2 cut(s) 29, 694
CseI GACGC 2 cut(s) 1126, 1134
Csp6I GTAC 3 cut(s) 306, 956, 1070
CspCI CAANNNNNGTGG 2 cut(s) 1015, 1050
CviAII CATG 8 cut(s) 61, 265, 617, 769, 840, 979, 1010, 1123
CviQI GTAC 3 cut(s) 306, 956, 1070
DdeI CTNAG 2 cut(s) 309, 1133
DpnI GATC 6 cut(s) 255, 300, 684, 751, 964, 1129
DpnII GATC 6 cut(s) 253, 298, 682, 749, 962, 1127
Eam1104I CTCTTC 1 cut(s) 112
EarI CTCTTC 1 cut(s) 112
EciI GGCGGA 1 cut(s) 246
Eco130I CCWWGG 1 cut(s) 900
Eco147I AGGCCT 1 cut(s) 781
Eco24I GRGCYC 1 cut(s) 442
Eco47I GGWCC 1 cut(s) 29
Eco57I CTGAAG 1 cut(s) 884
Eco88I CYCGRG 1 cut(s) 1053
EcoO109I RGGNCCY 1 cut(s) 694
EcoRII CCWGG 3 cut(s) 178, 745, 1148
EcoT14I CCWWGG 1 cut(s) 900
EcoT38I GRGCYC 1 cut(s) 442
ErhI CCWWGG 1 cut(s) 900
FaeI CATG 8 cut(s) 64, 268, 620, 772, 843, 982, 1013, 1126
FaqI GGGAC 5 cut(s) 15, 161, 242, 881, 1124
FatI CATG 8 cut(s) 60, 264, 616, 768, 839, 978, 1009, 1122
FblI GTMKAC 1 cut(s) 191
Fnu4HI GCNGC 6 cut(s) 492, 497, 507, 930, 1005, 1023
FokI GGATG 1 cut(s) 818
FriOI GRGCYC 1 cut(s) 442
Fsp4HI GCNGC 6 cut(s) 492, 497, 507, 930, 1005, 1023
FspBI CTAG 7 cut(s) 42, 261, 314, 432, 530, 959, 1094
FspI TGCGCA 1 cut(s) 495
GlaI GCGC 1 cut(s) 495
GluI GCNGC 6 cut(s) 492, 497, 507, 930, 1005, 1023
GsaI CCCAGC 1 cut(s) 474
GsuI CTGGAG 1 cut(s) 348
HaeIII GGCC 2 cut(s) 695, 781
HapII CCGG 2 cut(s) 27, 667
HgaI GACGC 2 cut(s) 1126, 1134
HhaI GCGC 1 cut(s) 496
Hin1II CATG 8 cut(s) 64, 268, 620, 772, 843, 982, 1013, 1126
Hin6I GCGC 1 cut(s) 494
HinP1I GCGC 1 cut(s) 494
HincII GTYRAC 4 cut(s) 192, 277, 324, 550
HindII GTYRAC 4 cut(s) 192, 277, 324, 550
HinfI GANTC 3 cut(s) 120, 248, 1051
HpaI GTTAAC 1 cut(s) 550
HpaII CCGG 2 cut(s) 27, 667
HphI GGTGA 3 cut(s) 578, 800, 899
Hpy166II GTNNAC 4 cut(s) 192, 277, 324, 550
Hpy188I TCNGA 3 cut(s) 253, 754, 1001
Hpy188III TCNNGA 6 cut(s) 61, 223, 245, 359, 416, 680
Hpy8I GTNNAC 4 cut(s) 192, 277, 324, 550
Hpy99I CGWCG 2 cut(s) 193, 196
HpyAV CCTTC 2 cut(s) 194, 222
HpyCH4III ACNGT 3 cut(s) 389, 590, 625
HpyCH4V TGCA 8 cut(s) 268, 506, 583, 616, 852, 932, 1007, 1031
HpyF10VI GCNNNNNNNGC 9 cut(s) 265, 515, 849, 917, 926, 1013, 1022, 1028, 1114
HpyF3I CTNAG 2 cut(s) 309, 1133
Hsp92II CATG 8 cut(s) 64, 268, 620, 772, 843, 982, 1013, 1126
HspAI GCGC 1 cut(s) 494
KroI GCCGGC 1 cut(s) 666
KroNI GCCGGC 1 cut(s) 668
KspAI GTTAAC 1 cut(s) 550
Kzo9I GATC 6 cut(s) 253, 298, 682, 749, 962, 1127
LmnI GCTCC 3 cut(s) 247, 329, 380
Lsp1109I GCAGC 6 cut(s) 478, 508, 518, 916, 991, 1009
LweI GCATC 2 cut(s) 592, 934
MaeI CTAG 7 cut(s) 42, 261, 314, 432, 530, 959, 1094
MaeIII GTNAC 3 cut(s) 788, 887, 1048
MalI GATC 6 cut(s) 255, 300, 684, 751, 964, 1129
MbiI CCGCTC 1 cut(s) 429
MboI GATC 6 cut(s) 253, 298, 682, 749, 962, 1127
MboII GAAGA 3 cut(s) 129, 492, 871
MfeI CAATTG 1 cut(s) 1032
MflI RGATCY 2 cut(s) 253, 1127
MhlI GDGCHC 1 cut(s) 442
MluCI AATT 8 cut(s) 91, 336, 405, 611, 809, 823, 1032, 1063
MlyI GAGTC 2 cut(s) 129, 1045
MmeI TCCRAC 1 cut(s) 1024
MnlI CCTC 7 cut(s) 45, 169, 219, 709, 811, 1006, 1142
MroNI GCCGGC 1 cut(s) 666
MseI TTAA 4 cut(s) 486, 549, 690, 699
MslI CAYNNNNRTG 1 cut(s) 588
MspCI CTTAAG 1 cut(s) 689
MspI CCGG 2 cut(s) 27, 667
MspR9I CCNGG 3 cut(s) 180, 747, 1150
MunI CAATTG 1 cut(s) 1032
MvaI CCWGG 3 cut(s) 180, 747, 1150
MwoI GCNNNNNNNGC 9 cut(s) 265, 515, 849, 917, 926, 1013, 1022, 1028, 1114
NaeI GCCGGC 1 cut(s) 668
NdeII GATC 6 cut(s) 253, 298, 682, 749, 962, 1127
NgoMIV GCCGGC 1 cut(s) 666
NlaIII CATG 8 cut(s) 64, 268, 620, 772, 843, 982, 1013, 1126
NlaIV GGNNCC 3 cut(s) 31, 243, 1129
NmuCI GTSAC 3 cut(s) 788, 887, 1048
NsbI TGCGCA 1 cut(s) 495
NspI RCATGY 2 cut(s) 268, 843
PaeI GCATGC 1 cut(s) 268
PaeR7I CTCGAG 1 cut(s) 1053
PagI TCATGA 1 cut(s) 60
PaqCI CACCTGC 1 cut(s) 1007
PceI AGGCCT 1 cut(s) 781
PdiI GCCGGC 1 cut(s) 668
PfeI GAWTC 1 cut(s) 248
PflFI GACNNNGTC 2 cut(s) 893, 979
PkrI GCNGC 6 cut(s) 493, 498, 508, 931, 1006, 1024
PleI GAGTC 2 cut(s) 128, 1045
PpsI GAGTC 2 cut(s) 128, 1045
Psp6I CCWGG 3 cut(s) 178, 745, 1148
PspFI CCCAGC 1 cut(s) 470
PspGI CCWGG 3 cut(s) 178, 745, 1148
PspN4I GGNNCC 3 cut(s) 31, 243, 1129
PspPI GGNCC 2 cut(s) 29, 694
PspXI VCTCGAGB 1 cut(s) 1053
PstNI CAGNNNCTG 1 cut(s) 1022
PsuI RGATCY 2 cut(s) 253, 1127
PsyI GACNNNGTC 2 cut(s) 893, 979
RsaI GTAC 3 cut(s) 307, 957, 1071
RsaNI GTAC 3 cut(s) 306, 956, 1070
RseI CAYNNNNRTG 1 cut(s) 588
SalI GTCGAC 1 cut(s) 190
SaqAI TTAA 4 cut(s) 486, 549, 690, 699
SatI GCNGC 6 cut(s) 492, 497, 507, 930, 1005, 1023
Sau3AI GATC 6 cut(s) 253, 298, 682, 749, 962, 1127
Sau96I GGNCC 2 cut(s) 29, 694
ScaI AGTACT 1 cut(s) 307
SchI GAGTC 2 cut(s) 129, 1045
ScrFI CCNGG 3 cut(s) 180, 747, 1150
SduI GDGCHC 1 cut(s) 442
SfaNI GCATC 2 cut(s) 592, 934
SfcI CTRYAG 1 cut(s) 364
Sfr274I CTCGAG 1 cut(s) 1053
SgrDI CGTCGACG 1 cut(s) 190
SinI GGWCC 1 cut(s) 29
SlaI CTCGAG 1 cut(s) 1053
SmiMI CAYNNNNRTG 1 cut(s) 588
SmlI CTYRAG 3 cut(s) 223, 689, 1053
SmoI CTYRAG 3 cut(s) 223, 689, 1053
SphI GCATGC 1 cut(s) 268
Sse9I AATT 8 cut(s) 91, 336, 405, 611, 809, 823, 1032, 1063
SseBI AGGCCT 1 cut(s) 781
SsiI CCGC 2 cut(s) 257, 427
SspMI CTAG 7 cut(s) 42, 261, 314, 432, 530, 959, 1094
StuI AGGCCT 1 cut(s) 781
StyD4I CCNGG 3 cut(s) 178, 745, 1148
StyI CCWWGG 1 cut(s) 900
TaaI ACNGT 3 cut(s) 389, 590, 625
TaqI TCGA 7 cut(s) 191, 215, 297, 723, 991, 1054, 1090
TasI AATT 8 cut(s) 91, 336, 405, 611, 809, 823, 1032, 1063
TatI WGTACW 2 cut(s) 305, 955
TfiI GAWTC 1 cut(s) 248
Tru1I TTAA 4 cut(s) 486, 549, 690, 699
Tru9I TTAA 4 cut(s) 486, 549, 690, 699
TscAI CASTG 2 cut(s) 508, 1033
TseFI GTSAC 3 cut(s) 788, 887, 1048
TseI GCWGC 6 cut(s) 491, 496, 506, 929, 1004, 1022
Tsp45I GTSAC 3 cut(s) 788, 887, 1048
TspDTI ATGAA 2 cut(s) 785, 819
TspGWI ACGGA 1 cut(s) 622
TspRI CASTG 2 cut(s) 508, 1033
Tth111I GACNNNGTC 2 cut(s) 893, 979
Vha464I CTTAAG 1 cut(s) 689
VpaK11BI GGWCC 1 cut(s) 29
XapI RAATTY 2 cut(s) 809, 823
XceI RCATGY 2 cut(s) 268, 843
XcmI CCANNNNNNNNNTGG 1 cut(s) 851
XhoI CTCGAG 1 cut(s) 1053
XmiI GTMKAC 1 cut(s) 191
XspI CTAG 7 cut(s) 42, 261, 314, 432, 530, 959, 1094
ZrmI AGTACT 1 cut(s) 307
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.