RLG00000019780

Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
56647906 .. 56648419
514 bp
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UTR
Exon/CDS
Intron
RLM00000019780

Sequence Viewer

Length: 390 bp
ATGTTCGATACTTCAAGATTGACTCCCTCCGTCGCCCAAGACGTTGCCGCCGCCGTCGCTGAGTCCACCAAACGCCGACTCGGCACTCAAGATAAGTCCTCGCAAGCCCTAACTTTCGCCGACCTTTATACTATGTTCTCATCCAAAACAGGCCCCGAAAGTGCGGCGAGTCGAGGGTTTTGGGGGGGAAGGGGAAGCGGGGAAAAGGGCTGGAGCAATGGGGTTTTGTTAGTTTCCAAGGACACGGAGAATCTCGGGGAAATTACATTTAGGGAGTTTGTGAATTTGGTTAAGGAAGAGAATGAAGTTTCCGAGGAGGCTTTGGTGAGAGATGTGTTGTATGCTTGTCAGGGAATTGATGGGAAGTATGTAAATTTGATTAGCATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

130

Amino Acids

14.01

Weight (kDa)

4.87

Isoelectric Point (pI)

39.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 48, 51, 164, 198
AcsI RAATTY 2 cut(s) 283, 373
AgsI TTSAA 1 cut(s) 15
Ama87I CYCGRG 1 cut(s) 254
AoxI GGCC 1 cut(s) 151
ApoI RAATTY 2 cut(s) 283, 373
AspS9I GGNCC 1 cut(s) 152
AsuHPI GGTGA 1 cut(s) 337
AvaI CYCGRG 1 cut(s) 254
BccI CCATC 1 cut(s) 353
BceAI ACGGC 1 cut(s) 38
BglI GCCNNNNNGGC 1 cut(s) 81
BisI GCNGC 3 cut(s) 48, 51, 165
BlsI GCNGC 3 cut(s) 49, 52, 166
BmeT110I CYCGRG 1 cut(s) 254
BmgT120I GGNCC 1 cut(s) 152
BmiI GGNNCC 1 cut(s) 154
BpmI CTGGAG 1 cut(s) 232
BpuEI CTTGAG 1 cut(s) 72
BsaJI CCNNGG 2 cut(s) 237, 312
Bse3DI GCAATG 1 cut(s) 223
BseDI CCNNGG 2 cut(s) 237, 312
BseGI GGATG 1 cut(s) 140
BseMI GCAATG 1 cut(s) 223
BseMII CTCAG 1 cut(s) 51
BseRI GAGGAG 1 cut(s) 329
BshFI GGCC 1 cut(s) 153
BsiHKCI CYCGRG 1 cut(s) 254
BsnI GGCC 1 cut(s) 153
BsoBI CYCGRG 1 cut(s) 254
BspACI CCGC 4 cut(s) 48, 51, 164, 198
BspANI GGCC 1 cut(s) 153
BspCNI CTCAG 1 cut(s) 52
BspLI GGNNCC 1 cut(s) 154
BsrDI GCAATG 1 cut(s) 223
BssECI CCNNGG 2 cut(s) 237, 312
BssT1I CCWWGG 1 cut(s) 237
Bst6I CTCTTC 1 cut(s) 291
BstC8I GCNNGC 1 cut(s) 105
BstDEI CTNAG 1 cut(s) 60
BstF5I GGATG 1 cut(s) 140
BstMWI GCNNNNNNNGC 2 cut(s) 56, 81
BsuRI GGCC 1 cut(s) 153
BtsCI GGATG 1 cut(s) 140
Cac8I GCNNGC 1 cut(s) 105
Cfr13I GGNCC 1 cut(s) 152
CviJI RGCY 4 cut(s) 107, 153, 210, 320
CviKI_1 RGCY 4 cut(s) 107, 153, 210, 320
DdeI CTNAG 1 cut(s) 60
Eam1104I CTCTTC 1 cut(s) 291
EarI CTCTTC 1 cut(s) 291
Eco130I CCWWGG 1 cut(s) 237
Eco88I CYCGRG 1 cut(s) 254
EcoO109I RGGNCCY 1 cut(s) 152
EcoT14I CCWWGG 1 cut(s) 237
ErhI CCWWGG 1 cut(s) 237
FaiI YATR 6 cut(s) 129, 134, 342, 369, 386, 388
FauI CCCGC 1 cut(s) 191
FauNDI CATATG 1 cut(s) 386
Fnu4HI GCNGC 3 cut(s) 48, 51, 165
FokI GGATG 1 cut(s) 127
Fsp4HI GCNGC 3 cut(s) 48, 51, 165
GluI GCNGC 3 cut(s) 48, 51, 165
GsuI CTGGAG 1 cut(s) 232
HaeIII GGCC 1 cut(s) 153
HinfI GANTC 5 cut(s) 22, 62, 78, 169, 250
HphI GGTGA 1 cut(s) 337
Hpy166II GTNNAC 1 cut(s) 66
Hpy188I TCNGA 1 cut(s) 313
Hpy188III TCNNGA 2 cut(s) 15, 89
Hpy8I GTNNAC 1 cut(s) 66
Hpy99I CGWCG 2 cut(s) 35, 59
HpyAV CCTTC 1 cut(s) 183
HpyCH4IV ACGT 1 cut(s) 42
HpyF10VI GCNNNNNNNGC 2 cut(s) 56, 81
HpyF3I CTNAG 1 cut(s) 60
HpySE526I ACGT 1 cut(s) 42
LmnI GCTCC 1 cut(s) 213
LpnPI CCDG 3 cut(s) 135, 196, 335
MaeII ACGT 1 cut(s) 42
MboII GAAGA 1 cut(s) 308
MluCI AATT 4 cut(s) 261, 283, 354, 373
MlyI GAGTC 4 cut(s) 16, 71, 72, 178
MnlI CCTC 5 cut(s) 37, 109, 167, 307, 310
MseI TTAA 1 cut(s) 291
MwoI GCNNNNNNNGC 2 cut(s) 56, 81
NdeI CATATG 1 cut(s) 386
NlaIV GGNNCC 1 cut(s) 154
NmeAIII GCCGAG 1 cut(s) 60
PcsI WCGNNNNNNNCGW 1 cut(s) 39
PfeI GAWTC 1 cut(s) 250
PkrI GCNGC 3 cut(s) 49, 52, 166
PleI GAGTC 4 cut(s) 16, 70, 72, 177
PpsI GAGTC 4 cut(s) 16, 70, 72, 177
PspN4I GGNNCC 1 cut(s) 154
PspPI GGNCC 1 cut(s) 152
SaqAI TTAA 1 cut(s) 291
SatI GCNGC 3 cut(s) 48, 51, 165
Sau96I GGNCC 1 cut(s) 152
SchI GAGTC 4 cut(s) 16, 71, 72, 178
SetI ASST 2 cut(s) 45, 126
SmlI CTYRAG 1 cut(s) 87
SmoI CTYRAG 1 cut(s) 87
Sse9I AATT 4 cut(s) 261, 283, 354, 373
SsiI CCGC 4 cut(s) 48, 51, 164, 198
StyI CCWWGG 1 cut(s) 237
TaiI ACGT 1 cut(s) 45
TaqI TCGA 2 cut(s) 6, 172
TasI AATT 4 cut(s) 261, 283, 354, 373
TauI GCSGC 3 cut(s) 50, 53, 167
TfiI GAWTC 1 cut(s) 250
Tru1I TTAA 1 cut(s) 291
Tru9I TTAA 1 cut(s) 291
TspDTI ATGAA 1 cut(s) 318
TspGWI ACGGA 2 cut(s) 19, 260
XapI RAATTY 2 cut(s) 283, 373
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.