RLG00000020411

Protein of unknown function (DUF3754)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0005827
Physical Location & Seq
Forward (+)
64747522 .. 64753989
6468 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020411

Sequence Viewer

Length: 2154 bp
ATGTCAGCTTCTTACCACACTCTCACCAGCCTCACCGCTCTCTCCTTGACCTCAAAACGCCGTCGTTCTACTCCTTCAACACCTCACTCGCTCACACTCGCTCGCTCTTCCCTCACCGGCTTCCGAGAAATCTCCACCGAGCCCAAGCAACCCCAAACCGACGCTATAAGCCTCACAGAAGCGCCGCTTCTTAAGAAGCAGAACGACGTCGTCCCGCAGAAGAAGAACCGAGAAGATGAAGATGAAGATGAAGATCAGGCAATTTCGAAGATTCCAGTTCCCAGGCAGAAGTACATCCCGGTCTCCAAGGCTGAGCTGCTAGACGGCGTCGTTTCGAATCTCTTCCGAGACCAGAACGGCGTTGACGACGATGATGATTTGGAGCAGTTTCTTCTTCTCTCATCGTGCTTGGATTCGATTCTTCATGCCGAGCACAAAAACATTCTGGAGGAAATGCGAGCCGATTATTCGGAATCCAACTCCATGGAGTACAAGCAAGCAATTGAAGAGTTAGCAATGGCTAATGGACAGGGCTTGGATTCTGCTGAAGGAATCAATGGAGTTGGGAGTGAAGAAAATGAAGCTGAAGTTCCTTTCGATTATGTTGAGGGATTGAGGAAACTCTTGGGTTCTTCAGCTAAGGACGTCAAAAGAGTTGCTGTAGCCACTCGTTTCCAGCGCTCTTTCATGCAGCTTCTTTATGACGCTCAGTTTGAAGAACTATCAGCAAGGGATTTAATGTTGACATCTGCATTAAACTCAGACTATCTCCTTACTTTGCCAATATATGTTGACTGGAAGAAGGCTTCTCAGTCCAATGCAATAATATACAGGCGGGGATATGCAACTGAAAGGCAGAAGGGTCTACTACTTGTTGAAAAACTAGAGTACATACAGTCCAAACTTCTACGAGGAATCTTCTTCATTGTATCGAAACCATTGGGGGAAATTGGGAGCTGGATAACTGAGTCATTGAAAGTTGCTTTTCAGACACCAGAGGTACAAGATTGGACTGAAAAAATGAAACTTTGGCTAAAGGAGTTCTCTGTTATTCAGCAAGCGTTTCGTACTAACGAACAAACTTCTGATGATCTGCTGGGAGTAGATCAACTATCAGATAGGGAACTTCCAATATGGCTGGCAGCACAGAGAGCTGTATCTCGTTATGAAGGAATTTTATCCCCAGTTGGACCCCGTGGAAGGCTCTTAAGGAAGTTGCTTTCATGGATTGGACTTATTTCCCTTACACCAGAAACACCATTTGAGTTTGATGATGATGCTAATGCTTCTGATCCTTATGCAAGGCCCATCTTCTTATCAAGGATATCACTTAGTGACATATGGAGACCTGCTACATGGAAATACTGTGAAAAGAATATATGGAAAATGTTGAAGACTTCTGTTTCCATTCTTTTCTCAAAGTCAATCCTCCAGGAGGCAGCATATCAAGAATTGATTTTGCTGTATACCAAAGAAGGAGATGACAGGAATACTGAAGATAATGCTTCAGTTCCATCGTTGCAGTTAAAGATTTATGAGAAAATCCCTATTCCGGATCTACCAGTCATCTTTCCCCACAAAAAGCTCTCTTTCCGTATCATAGACACGGTGCGCTTGGACATTGCCTCAACGTTGGCTCTTTCAGCATACTTCATAAACTACAAATTTGTTAATGTCTTATCTTCGCCGTCAGCAATATATCTTGATGTGGTCGCTATCAGTGCTCTTGTAATATATATCTCCCGTGTGGTTCTGGGATACAAACAGACCTGGGATAGGTATCAACTTTTGGTCAACAAGACGCTTTATGAGAAAACCTTAGCAAGTGGATTTGGTTCAGTTCATTTTTTGCTGGATGCTTCTGAACAGCAACAATACAAGGAATCCATTTTGGCGTATGCAATCCTTCTCAAAGCTAAGGAGGGAAAGCTTACAAGTCGCAGGAGTGTTGGAGACACATGCGAAAGATTTATGTATGATGTGTTTAAAGTAAAGGTTGAAATGCCAGTTGACAAGGCAATTGCTACATTATTAAGACTGGGGCTTGCTGCAGAAACAAGTATTGATGGAAGGATTACTCTGCAAGCTATTCCATGTTCCAGTGCATATGATTCCCTTAAACAACGTTGGAATAGTTTACTCGGTCAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3754

Protein Analysis

718

Amino Acids

81.13

Weight (kDa)

5.45

Isoelectric Point (pI)

46.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF3754 PF12576 482 - 612 1.6e-32 Protein of unknown function (DUF3754)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 210, 648
Acc36I ACCTGC 1 cut(s) 1357
AccBSI CCGCTC 1 cut(s) 38
AccI GTMKAC 2 cut(s) 865, 1466
AccIII TCCGGA 1 cut(s) 1552
AciI CCGC 4 cut(s) 36, 185, 215, 835
AclI AACGTT 2 cut(s) 1631, 2125
AclWI GGATC 2 cut(s) 1286, 1563
AcsI RAATTY 2 cut(s) 1173, 1664
AcuI CTGAAG 5 cut(s) 567, 606, 618, 1491, 1515
AcyI GRCGYC 3 cut(s) 207, 327, 645
AdeI CACNNNGTG 1 cut(s) 1334
AfaI GTAC 5 cut(s) 293, 491, 890, 1002, 1069
AfeI AGCGCT 1 cut(s) 680
AfiI CCNNNNNNNGG 4 cut(s) 1200, 1435, 1552, 1776
AflII CTTAAG 2 cut(s) 191, 1207
AgsI TTSAA 7 cut(s) 78, 506, 716, 878, 976, 1393, 2000
AjnI CCWGG 3 cut(s) 281, 1431, 1769
Alw21I GWGCWC 2 cut(s) 435, 1726
Alw26I GTCTC 4 cut(s) 307, 342, 1339, 1947
AlwI GGATC 2 cut(s) 1286, 1563
Aor13HI TCCGGA 1 cut(s) 1552
Aor51HI AGCGCT 1 cut(s) 680
AoxI GGCC 1 cut(s) 1304
ApeKI GCWGC 5 cut(s) 316, 691, 1142, 1439, 2048
ApoI RAATTY 2 cut(s) 1173, 1664
ArsI GACNNNNNNTTYG 2 cut(s) 695, 727
Asp700I GAANNNNTTC 1 cut(s) 341
AspLEI GCGC 3 cut(s) 184, 681, 1614
AspS9I GGNCC 2 cut(s) 1190, 1305
AsuC2I CCSGG 1 cut(s) 299
AsuHPI GGTGA 3 cut(s) 16, 25, 106
AsuII TTCGAA 2 cut(s) 266, 335
AvaII GGWCC 1 cut(s) 1190
BanII GRGCYC 1 cut(s) 144
BbsI GAAGAC 1 cut(s) 1400
Bbv12I GWGCWC 2 cut(s) 435, 1726
BbvI GCAGC 5 cut(s) 303, 703, 1154, 1451, 2035
BccI CCATC 3 cut(s) 1316, 1522, 2060
BceAI ACGGC 4 cut(s) 45, 340, 373, 1672
BcgI CGANNNNNNTGC 2 cut(s) 1046, 1080
BciT130I CCWGG 3 cut(s) 283, 1433, 1771
BciVI GTATCC 1 cut(s) 1751
BcnI CCSGG 1 cut(s) 299
BcoDI GTCTC 4 cut(s) 307, 342, 1339, 1947
BfaI CTAG 2 cut(s) 320, 884
BfmI CTRYAG 2 cut(s) 660, 2049
BfoI RGCGCY 2 cut(s) 185, 682
BfrI CTTAAG 2 cut(s) 191, 1207
BfuAI ACCTGC 1 cut(s) 1357
BfuI GTATCC 1 cut(s) 1751
BisI GCNGC 6 cut(s) 185, 317, 692, 1143, 1440, 2049
BlpI GCTNAGC 1 cut(s) 312
BlsI GCNGC 6 cut(s) 186, 318, 693, 1144, 1441, 2050
Bme1390I CCNGG 4 cut(s) 283, 299, 1433, 1771
Bme18I GGWCC 1 cut(s) 1190
BmgT120I GGNCC 2 cut(s) 1190, 1305
BmiI GGNNCC 1 cut(s) 1192
BmrFI CCNGG 4 cut(s) 283, 299, 1433, 1771
BmrI ACTGGG 2 cut(s) 1178, 2048
BmsI GCATC 2 cut(s) 1267, 1846
BmuI ACTGGG 2 cut(s) 1178, 2048
BpiI GAAGAC 1 cut(s) 1400
BpmI CTGGAG 2 cut(s) 467, 1415
Bpu10I CCTNAGC 3 cut(s) 639, 1819, 1917
Bpu1102I GCTNAGC 1 cut(s) 312
Bpu14I TTCGAA 2 cut(s) 266, 335
BpuMI CCSGG 1 cut(s) 299
BsaBI GATNNNNATC 2 cut(s) 252, 1779
BsaHI GRCGYC 3 cut(s) 207, 327, 645
BsaI GGTCTC 3 cut(s) 307, 342, 1339
BsaJI CCNNGG 5 cut(s) 281, 306, 483, 1195, 1770
BsaWI WCCGGW 1 cut(s) 1552
Bsc4I CCNNNNNNNGG 4 cut(s) 1200, 1435, 1552, 1776
Bse118I RCCGGY 1 cut(s) 116
Bse1I ACTGG 7 cut(s) 275, 800, 1184, 1562, 2006, 2043, 2100
Bse3DI GCAATG 2 cut(s) 522, 1620
Bse8I GATNNNNATC 2 cut(s) 252, 1779
BseAI TCCGGA 1 cut(s) 1552
BseBI CCWGG 3 cut(s) 283, 1433, 1771
BseDI CCNNGG 5 cut(s) 281, 306, 483, 1195, 1770
BseGI GGATG 2 cut(s) 294, 1861
BseJI GATNNNNATC 2 cut(s) 252, 1779
BseLI CCNNNNNNNGG 4 cut(s) 1200, 1435, 1552, 1776
BseMI GCAATG 2 cut(s) 522, 1620
BseMII CTCAG 5 cut(s) 303, 722, 774, 824, 957
BseNI ACTGG 7 cut(s) 275, 800, 1184, 1562, 2006, 2043, 2100
BseXI GCAGC 5 cut(s) 303, 703, 1154, 1451, 2035
BseYI CCCAGC 1 cut(s) 1096
BshFI GGCC 1 cut(s) 1306
BsiHKAI GWGCWC 2 cut(s) 435, 1726
BsiSI CCGG 3 cut(s) 117, 299, 1553
BslFI GGGAC 1 cut(s) 197
BslI CCNNNNNNNGG 4 cut(s) 1200, 1435, 1552, 1776
BsmAI GTCTC 4 cut(s) 307, 342, 1339, 1947
BsmFI GGGAC 1 cut(s) 197
BsnI GGCC 1 cut(s) 1306
Bso31I GGTCTC 3 cut(s) 307, 342, 1339
Bsp119I TTCGAA 2 cut(s) 266, 335
Bsp1286I GDGCHC 3 cut(s) 144, 435, 1726
Bsp13I TCCGGA 1 cut(s) 1552
Bsp143I GATC 5 cut(s) 253, 1090, 1105, 1291, 1555
Bsp1720I GCTNAGC 1 cut(s) 312
Bsp19I CCATGG 1 cut(s) 483
BspACI CCGC 4 cut(s) 36, 185, 215, 835
BspANI GGCC 1 cut(s) 1306
BspCNI CTCAG 5 cut(s) 304, 721, 773, 823, 958
BspEI TCCGGA 1 cut(s) 1552
BspLI GGNNCC 1 cut(s) 1192
BspMAI CTGCAG 1 cut(s) 2053
BspMI ACCTGC 1 cut(s) 1357
BspPI GGATC 2 cut(s) 1286, 1563
BspQI GCTCTTC 1 cut(s) 112
BspT104I TTCGAA 2 cut(s) 266, 335
BspTI CTTAAG 2 cut(s) 191, 1207
BspTNI GGTCTC 3 cut(s) 307, 342, 1339
BsrBI CCGCTC 1 cut(s) 38
BsrDI GCAATG 2 cut(s) 522, 1620
BsrFI RCCGGY 1 cut(s) 116
BsrI ACTGG 7 cut(s) 275, 800, 1184, 1562, 2006, 2043, 2100
BssAI RCCGGY 1 cut(s) 116
BssECI CCNNGG 5 cut(s) 281, 306, 483, 1195, 1770
BssMI GATC 5 cut(s) 253, 1090, 1105, 1291, 1555
BssNAI GTATAC 1 cut(s) 1467
BssNI GRCGYC 3 cut(s) 207, 327, 645
BssT1I CCWWGG 2 cut(s) 306, 483
Bst1107I GTATAC 1 cut(s) 1467
Bst2UI CCWGG 3 cut(s) 283, 1433, 1771
Bst4CI ACNGT 3 cut(s) 897, 1367, 1609
Bst6I CTCTTC 3 cut(s) 112, 347, 501
BstACI GRCGYC 3 cut(s) 207, 327, 645
BstAFI CTTAAG 2 cut(s) 191, 1207
BstBI TTCGAA 2 cut(s) 266, 335
BstC8I GCNNGC 7 cut(s) 103, 459, 498, 1059, 1140, 2046, 2085
BstDEI CTNAG 9 cut(s) 312, 639, 708, 760, 810, 966, 1331, 1819, 1917
BstDSI CCRYGG 2 cut(s) 483, 1195
BstENI CCTNNNNNAGG 2 cut(s) 1433, 1774
BstF5I GGATG 2 cut(s) 294, 1861
BstH2I RGCGCY 2 cut(s) 185, 682
BstHHI GCGC 3 cut(s) 184, 681, 1614
BstKTI GATC 5 cut(s) 256, 1093, 1108, 1294, 1558
BstMAI GTCTC 4 cut(s) 307, 342, 1339, 1947
BstMBI GATC 5 cut(s) 253, 1090, 1105, 1291, 1555
BstMWI GCNNNNNNNGC 3 cut(s) 1151, 1643, 1721
BstNI CCWGG 3 cut(s) 283, 1433, 1771
BstNSI RCATGY 1 cut(s) 1962
BstSCI CCNGG 4 cut(s) 281, 297, 1431, 1769
BstSFI CTRYAG 2 cut(s) 660, 2049
BstV1I GCAGC 5 cut(s) 303, 703, 1154, 1451, 2035
BstV2I GAAGAC 1 cut(s) 1400
BstX2I RGATCY 1 cut(s) 1555
BstXI CCANNNNNNTGG 1 cut(s) 484
BstYI RGATCY 1 cut(s) 1555
BstZ17I GTATAC 1 cut(s) 1467
BsuI GTATCC 1 cut(s) 1751
BsuRI GGCC 1 cut(s) 1306
BtgI CCRYGG 2 cut(s) 483, 1195
BtsCI GGATG 2 cut(s) 294, 1861
BtsIMutI CAGTG 2 cut(s) 1726, 2107
BveI ACCTGC 1 cut(s) 1357
Cac8I GCNNGC 7 cut(s) 103, 459, 498, 1059, 1140, 2046, 2085
CfoI GCGC 3 cut(s) 184, 681, 1614
Cfr10I RCCGGY 1 cut(s) 116
Cfr13I GGNCC 2 cut(s) 1190, 1305
CseI GACGC 4 cut(s) 170, 316, 713, 1810
Csp6I GTAC 5 cut(s) 292, 490, 889, 1001, 1068
CviAII CATG 7 cut(s) 425, 484, 688, 1224, 1356, 1959, 2094
CviQI GTAC 5 cut(s) 292, 490, 889, 1001, 1068
DdeI CTNAG 9 cut(s) 312, 639, 708, 760, 810, 966, 1331, 1819, 1917
DpnI GATC 5 cut(s) 255, 1092, 1107, 1293, 1557
DpnII GATC 5 cut(s) 253, 1090, 1105, 1291, 1555
DraI TTTAAA 1 cut(s) 1987
DraIII CACNNNGTG 1 cut(s) 1334
Eam1104I CTCTTC 3 cut(s) 112, 347, 501
EarI CTCTTC 3 cut(s) 112, 347, 501
Eco130I CCWWGG 2 cut(s) 306, 483
Eco24I GRGCYC 1 cut(s) 144
Eco31I GGTCTC 3 cut(s) 307, 342, 1339
Eco32I GATATC 1 cut(s) 1326
Eco47I GGWCC 1 cut(s) 1190
Eco47III AGCGCT 1 cut(s) 680
Eco57I CTGAAG 5 cut(s) 567, 606, 618, 1491, 1515
EcoNI CCTNNNNNAGG 2 cut(s) 1433, 1774
EcoRII CCWGG 3 cut(s) 281, 1431, 1769
EcoRV GATATC 1 cut(s) 1326
EcoT14I CCWWGG 2 cut(s) 306, 483
EcoT38I GRGCYC 1 cut(s) 144
ErhI CCWWGG 2 cut(s) 306, 483
FaeI CATG 7 cut(s) 428, 487, 691, 1227, 1359, 1962, 2097
FalI AAGNNNNNCTT 2 cut(s) 171, 203
FaqI GGGAC 1 cut(s) 197
FatI CATG 7 cut(s) 424, 483, 687, 1223, 1355, 1958, 2093
FauI CCCGC 2 cut(s) 222, 828
FauNDI CATATG 2 cut(s) 1340, 2107
FblI GTMKAC 2 cut(s) 865, 1466
Fnu4HI GCNGC 6 cut(s) 185, 317, 692, 1143, 1440, 2049
FokI GGATG 2 cut(s) 281, 1868
FriOI GRGCYC 1 cut(s) 144
Fsp4HI GCNGC 6 cut(s) 185, 317, 692, 1143, 1440, 2049
FspBI CTAG 2 cut(s) 320, 884
GlaI GCGC 3 cut(s) 183, 680, 1613
GluI GCNGC 6 cut(s) 185, 317, 692, 1143, 1440, 2049
GsaI CCCAGC 1 cut(s) 1100
GsuI CTGGAG 2 cut(s) 467, 1415
HaeII RGCGCY 2 cut(s) 185, 682
HaeIII GGCC 1 cut(s) 1306
HapII CCGG 3 cut(s) 117, 299, 1553
HgaI GACGC 4 cut(s) 170, 316, 713, 1810
HhaI GCGC 3 cut(s) 184, 681, 1614
Hin1I GRCGYC 3 cut(s) 207, 327, 645
Hin1II CATG 7 cut(s) 428, 487, 691, 1227, 1359, 1962, 2097
Hin6I GCGC 3 cut(s) 182, 679, 1612
HinP1I GCGC 3 cut(s) 182, 679, 1612
HincII GTYRAC 5 cut(s) 364, 744, 793, 1795, 2011
HindII GTYRAC 5 cut(s) 364, 744, 793, 1795, 2011
HindIII AAGCTT 1 cut(s) 1928
HpaII CCGG 3 cut(s) 117, 299, 1553
HphI GGTGA 3 cut(s) 16, 25, 106
Hpy166II GTNNAC 8 cut(s) 364, 744, 793, 866, 1467, 1795, 2011, 2138
Hpy188I TCNGA 9 cut(s) 125, 347, 472, 763, 990, 1087, 1117, 1291, 1864
Hpy188III TCNNGA 5 cut(s) 446, 1448, 1553, 1703, 2147
Hpy8I GTNNAC 8 cut(s) 364, 744, 793, 866, 1467, 1795, 2011, 2138
Hpy99I CGWCG 6 cut(s) 66, 164, 209, 212, 332, 371
HpyAV CCTTC 9 cut(s) 84, 542, 796, 853, 1163, 1194, 1469, 1916, 2064
HpyCH4III ACNGT 3 cut(s) 897, 1367, 1609
HpyCH4IV ACGT 4 cut(s) 207, 645, 1631, 2125
HpyF10VI GCNNNNNNNGC 3 cut(s) 1151, 1643, 1721
HpyF3I CTNAG 9 cut(s) 312, 639, 708, 760, 810, 966, 1331, 1819, 1917
HpySE526I ACGT 4 cut(s) 207, 645, 1631, 2125
Hsp92I GRCGYC 3 cut(s) 207, 327, 645
Hsp92II CATG 7 cut(s) 428, 487, 691, 1227, 1359, 1962, 2097
HspAI GCGC 3 cut(s) 182, 679, 1612
Kpn2I TCCGGA 1 cut(s) 1552
Kzo9I GATC 5 cut(s) 253, 1090, 1105, 1291, 1555
LguI GCTCTTC 1 cut(s) 112
LmnI GCTCC 2 cut(s) 382, 954
Lsp1109I GCAGC 5 cut(s) 303, 703, 1154, 1451, 2035
LweI GCATC 2 cut(s) 1267, 1846
MaeI CTAG 2 cut(s) 320, 884
MaeII ACGT 4 cut(s) 207, 645, 1631, 2125
MaeIII GTNAC 1 cut(s) 1334
MalI GATC 5 cut(s) 255, 1092, 1107, 1293, 1557
MbiI CCGCTC 1 cut(s) 38
MboI GATC 5 cut(s) 253, 1090, 1105, 1291, 1555
MfeI CAATTG 2 cut(s) 501, 2019
MflI RGATCY 1 cut(s) 1555
MhlI GDGCHC 3 cut(s) 144, 435, 1726
MluCI AATT 7 cut(s) 261, 501, 948, 1173, 1451, 1664, 2019
MlyI GAGTC 1 cut(s) 977
MmeI TCCRAC 4 cut(s) 501, 1168, 1930, 2108
MroI TCCGGA 1 cut(s) 1552
MroXI GAANNNNTTC 1 cut(s) 341
MseI TTAA 9 cut(s) 192, 737, 755, 1208, 1526, 1671, 1986, 2033, 2118
MspCI CTTAAG 2 cut(s) 191, 1207
MspI CCGG 3 cut(s) 117, 299, 1553
MspR9I CCNGG 4 cut(s) 283, 299, 1433, 1771
MunI CAATTG 2 cut(s) 501, 2019
MvaI CCWGG 3 cut(s) 283, 1433, 1771
MwoI GCNNNNNNNGC 3 cut(s) 1151, 1643, 1721
NciI CCSGG 1 cut(s) 299
NcoI CCATGG 1 cut(s) 483
NdeI CATATG 2 cut(s) 1340, 2107
NdeII GATC 5 cut(s) 253, 1090, 1105, 1291, 1555
NlaIII CATG 7 cut(s) 428, 487, 691, 1227, 1359, 1962, 2097
NlaIV GGNNCC 1 cut(s) 1192
NmeAIII GCCGAG 1 cut(s) 454
NmuCI GTSAC 1 cut(s) 1334
NspI RCATGY 1 cut(s) 1962
NspV TTCGAA 2 cut(s) 266, 335
PciSI GCTCTTC 1 cut(s) 112
PcsI WCGNNNNNNNCGW 1 cut(s) 363
PdmI GAANNNNTTC 1 cut(s) 341
PflFI GACNNNGTC 2 cut(s) 209, 326
PfoI TCCNGGA 1 cut(s) 1431
PkrI GCNGC 6 cut(s) 186, 318, 693, 1144, 1441, 2050
PleI GAGTC 1 cut(s) 976
PpsI GAGTC 1 cut(s) 976
Psp1406I AACGTT 2 cut(s) 1631, 2125
Psp6I CCWGG 3 cut(s) 281, 1431, 1769
PspFI CCCAGC 1 cut(s) 1096
PspGI CCWGG 3 cut(s) 281, 1431, 1769
PspN4I GGNNCC 1 cut(s) 1192
PspPI GGNCC 2 cut(s) 1190, 1305
PstI CTGCAG 1 cut(s) 2053
PsuI RGATCY 1 cut(s) 1555
PsyI GACNNNGTC 2 cut(s) 209, 326
RsaI GTAC 5 cut(s) 293, 491, 890, 1002, 1069
RsaNI GTAC 5 cut(s) 292, 490, 889, 1001, 1068
SapI GCTCTTC 1 cut(s) 112
SaqAI TTAA 9 cut(s) 192, 737, 755, 1208, 1526, 1671, 1986, 2033, 2118
SatI GCNGC 6 cut(s) 185, 317, 692, 1143, 1440, 2049
Sau3AI GATC 5 cut(s) 253, 1090, 1105, 1291, 1555
Sau96I GGNCC 2 cut(s) 1190, 1305
SchI GAGTC 1 cut(s) 977
ScrFI CCNGG 4 cut(s) 283, 299, 1433, 1771
SduI GDGCHC 3 cut(s) 144, 435, 1726
SfaNI GCATC 2 cut(s) 1267, 1846
SfcI CTRYAG 2 cut(s) 660, 2049
SfuI TTCGAA 2 cut(s) 266, 335
SinI GGWCC 1 cut(s) 1190
SmlI CTYRAG 2 cut(s) 191, 1207
SmoI CTYRAG 2 cut(s) 191, 1207
Sse9I AATT 7 cut(s) 261, 501, 948, 1173, 1451, 1664, 2019
SsiI CCGC 4 cut(s) 36, 185, 215, 835
SspMI CTAG 2 cut(s) 320, 884
StyD4I CCNGG 4 cut(s) 281, 297, 1431, 1769
StyI CCWWGG 2 cut(s) 306, 483
TaaI ACNGT 3 cut(s) 897, 1367, 1609
TaiI ACGT 4 cut(s) 210, 648, 1634, 2128
TaqI TCGA 5 cut(s) 266, 335, 416, 597, 932
TaqII GACCGA 1 cut(s) 2132
TasI AATT 7 cut(s) 261, 501, 948, 1173, 1451, 1664, 2019
TatI WGTACW 3 cut(s) 291, 489, 888
TauI GCSGC 1 cut(s) 187
Tru1I TTAA 9 cut(s) 192, 737, 755, 1208, 1526, 1671, 1986, 2033, 2118
Tru9I TTAA 9 cut(s) 192, 737, 755, 1208, 1526, 1671, 1986, 2033, 2118
TscAI CASTG 2 cut(s) 1726, 2107
TseFI GTSAC 1 cut(s) 1334
TseI GCWGC 5 cut(s) 316, 691, 1142, 1439, 2048
Tsp45I GTSAC 1 cut(s) 1334
TspGWI ACGGA 1 cut(s) 1583
TspRI CASTG 2 cut(s) 1726, 2107
Tth111I GACNNNGTC 2 cut(s) 209, 326
Vha464I CTTAAG 2 cut(s) 191, 1207
VpaK11BI GGWCC 1 cut(s) 1190
XagI CCTNNNNNAGG 2 cut(s) 1433, 1774
XapI RAATTY 2 cut(s) 1173, 1664
XceI RCATGY 1 cut(s) 1962
XmiI GTMKAC 2 cut(s) 865, 1466
XmnI GAANNNNTTC 1 cut(s) 341
XspI CTAG 2 cut(s) 320, 884
ZraI GACGTC 2 cut(s) 208, 646
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.