RLG00000020854

Protein of unknown function (DUF1296)

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
69458785 .. 69467893
9109 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020854

Sequence Viewer

Length: 3363 bp
ATGAGTAGTGGTGGTGGGTTTAGGGTTTCAATCCCAAACAGCGTGAGGAAGACGATCCAGGACATCAAAGAGATCACAGGCAATCACAGCGAGGAAGAAATCTATGCAATGCTCAAGGAATGTAACATGGATCCCAACGAGACCGCGCAGAAACTTCTCCTTCAGGATCCATTTCATGAGGTCAAAAGGAAACGTGACAAGAGAAAAGAGAATCTGAACAACAGAGAGTCTGCAGAGCCACGGTGGAGACCTGGAATGCCGGGTAGGGGGGGTAGGGGTGGTCGGGTGAATTTTTCATCTCGTCCACCACATGATGCCGGTGGTGGCAGGAACTCAGGTCCTGGAACTGAGAATGGACCCGCTCAGGTTGCAGAGAAAGGTGTTGCTACCTCTTTGCCAACCACTCGTGAGACAAAAACTAAAGAGAGAAGTCTGGTAACAAGCTCTGTACCTGTGATTGTGGGTGGTCCTTCCAATGTGGCTTCGGGAACTACTACTGTTGTGCCTGCCTCGCAGTTATCTACTGGAACTAGTGCTGAAATAAGTTTGTCATTGGTTAGGGATAAATCGGGTAGCTCGATCTCTGCAGTGGATGCAGAAAAAATCCCCACCAGTGCATTCGGAAATGAGGACTTGCACGAGCAGGCTGCACCAAGCTCCAGTAGTAGCTCAGTTTTGCCAAACCCAGCGTCTACATTGGGAGCATGCTTTTCCCCCTCTGATCCTGTACTGGTGCCGTCTAATGATTCACGGCTCCCAGGTTCTGTGGGCACGATCAAACGTGAAGTTGTGAGCCATCATCCTCCTGCTTCTGAGGTTGGCAGCTCTTTAGCACAAGGAAAAACAACAAGCAAAACACAGGGAGTTGGGAAAACTCAGCCCTCTGATCTTTCACATCCTTCATCTACATCAACTCATGGCGGTTCGGTTAGTCGGCCATCATCTAATTATAGTAGCCGGTCGCAACAACTTATTGGCACTCAAAAAGTTGGTACCAACAAGGAGTGGAAACCAAAGCCCATAGTTTCTGCTGTTGTTCAAGGTCAAGCAACAGCTAATGTAGCTGCACCTGAGGTGCCTGCTGATTTGGTAGAGGTCTCTCCGCAGTCACAACCTGTTTCAAGTGTCCTTGATTCGGAAGAAGCAACTTCAAAACTGCAGAAGAAGCTAGAGGAATTACACCTTCCTCAGCTTCCACAGCGCAAATTAGTTATTCTTCCAAATCACATACACGTTCCTGAGTCTGAACGAAACAAGTTGAGTTTTGGAAGCTTTGGGGCAACTTTTGGTGTAACGAATAGCTATATCAGTGGTCCTGAGAGTGAGAAGAGCTCTACTCCTCGGTCTGAAACTTCTCAGGTTATTGAAGAATCTGTGGAGGAACAGTCCTCAAGCAATCAAAATGTGTTGGCAACTGCCGATGAGGGTGATTTTCGTGATCATTCGCAATCACCTACTCATATGCTTGAAAATCTATCATCTGGTGAGGGCGATGTCTCATCCAGTGCAGCCCAAGGACATAATGAATCTAAGCATGACACTGTATTGACTTCTGGAGGTCATCAGCTCCCAGTGGCTAATACTTCTCCGAATTATAGTTTTGGTATTGTACCTCCAATTTTAGGGAGTCAGCTTGCTGCATTTGAAAACTCTGAATCTCAAGCACGTGATATATCTCGGCTTCCAAGCTTTGTAGTACAACAACCCTTTGACCCAGCAAGTTATTATGCCCAATTTTACCGCTCAGGTGCTGATAGTGATGGCCGTCTTTCTCCTTTTCCATCTCCTGGGGTATCAACAAAGTACAATGGCAATGTTGGAGTATTGCCTCCAAGTTCTCAGTCTCCACAAGAGGGTGGGGTTCTTTCAGCAGCAGGTCCAACACCATTGGTGACACAGGCTTCTGGGCTTGTGCAAAGCTCAATAGCTGTAACTCAGCAGCCAGTTCCTGTCTTCCGACCGCCAGCTGGGGTGCACATACCTCATTATCCTAACTACATTCCTTACAGTCACTACTTTAACCCATTCTATGTTCCGCCTCCTATCCACCAATATTTGGGTAATGGAGCATTTCCTCAACAACCTCAAGCAGGTGGTGTGTATCCAGCTCCACCAGCAGCTGCTGCCACAGGAGTCAAATACTCACTGCCACAATACAAAGCAGGGACTAATACAGGAAACTCAAATCACATGGGAATGGCTAGTGGATATGGGCCCTATGGCTCTTCCCCAGCTGGTTATAATCCCAGTCCTGCCACGACTGCAGGAAATACTACTCCCAATGAAGATCTTAGCACATCTCAGTTCAAGGAGAGTAATGTATACATCACCGGACAGCAGAGTGAAGGTTCATCTGTATGGGTTGCTGCACCTAACCGAGAAATGCCCAGCTTAACAAGTTCATTTTACAACCTTCCTCCACAGGGTCAGCATGTGACTTTCACTCCAACGCAGGCCGGCCATGGTACCTTTACTGGTCTCTACCACCCTGCACAAGCAGTATCAGCTGCAGCTGTCCATCCACTTCTGCAACAGTCCCAAACCATGGCTGGGGCAGTTGACATGGGTGAGTATTGTTTCAGCTCTAGACTGCTACGATTGATGTCCGGTACTTTGCAGAAGAACTATAGCCAAGTTGCCATGCTCCACAAGTTCCTCAATATCGGTAAACTTAAGCCATTCTCAAAGCGTGTGCCTGTGCCGGTGCCGCCTAAGCAAGCTCCGACACAGTCAGAGATGGGCAGCAACTCTATTTTGAAGGTTGTTCACGCAGGTGGAAATGTTGAGAGTTACTACATGGCTACTCCTGCAGCCAAGATTTTGGAGAAGTACCCTTCTTTCTTGCTTGCTAGGCCTGAAGTCTTTAGGCGGCCGTGGGACTCAGTAGTGAAGCCGGATGCAATACTCACACCCGGAGAGAAAGTCTTTCTTGTTCCCCGCAGGACTGTGAGGAAGCTCCGTCTCAGAATACGAAGACCCGGGAAGGATTTTTCAGTCGATTCTTTCATGTCTCAATCGTCTATTGATGTATCAACTGAGACTCTACGACAGAGGAGAGATGTCGGTAGTGCAGTTGGTGATGCAAGTGAGAGTGACGCTTCTATTTGTAGTGCTATTAGCAGAAACAAAAGCGATGGCAAGAAGCATGTGACTTTTCGTGGCATCAAGAAACATGTGACATTTGCTGGCCTTGATGTGAAGCACAAGCCGGAGAAGACTCACAGCGAAATCGAGGAGCAAGATTCGAGTGAAAGCTCGAGTTCTCTAAAATCTCTCGGAGGGAGAAGGAGGGTACGGGTTGTGACATGGCAGCCGACTCTTACAGCAATAACAGAAGCTCATGGGAATGATTTGATGAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1121

Amino Acids

119.38

Weight (kDa)

8.97

Isoelectric Point (pI)

64.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GIP1_N PF06972 11 - 70 1.4e-34 GBF-interacting protein 1 N-terminal
PADRE PF14009 915 - 1112 2.6e-14 PADRE domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2241
AarI CACCTGC 2 cut(s) 2081, 2762
Acc36I ACCTGC 3 cut(s) 1865, 2081, 2762
Acc65I GGTACC 2 cut(s) 992, 2465
AccB1I GGYRCC 5 cut(s) 733, 992, 1075, 2465, 2704
AccB7I CCANNNNNTGG 3 cut(s) 1787, 2056, 2545
AccBSI CCGCTC 2 cut(s) 362, 1743
AccI GTMKAC 2 cut(s) 692, 2322
AccII CGCG 1 cut(s) 146
AclWI GGATC 6 cut(s) 49, 125, 138, 161, 174, 716
AcoI YGGCCR 4 cut(s) 935, 1762, 2458, 2870
AcsI RAATTY 1 cut(s) 289
AcuI CTGAAG 2 cut(s) 146, 2877
AcvI CACGTG 1 cut(s) 1667
AflII CTTAAG 1 cut(s) 2672
AflIII ACRYGT 2 cut(s) 1231, 3172
AgsI TTSAA 9 cut(s) 30, 1040, 1122, 1152, 1367, 1469, 1646, 2308, 2758
AhlI ACTAGT 1 cut(s) 530
AjnI CCWGG 5 cut(s) 57, 250, 340, 757, 1786
AleI CACNNNNGTG 1 cut(s) 2772
Alw21I GWGCWC 2 cut(s) 1334, 1977
Alw44I GTGCAC 1 cut(s) 1973
AlwI GGATC 6 cut(s) 49, 125, 138, 161, 174, 716
AlwNI CAGNNNCTG 6 cut(s) 341, 764, 1751, 1949, 2120, 2123
Ama87I CYCGRG 2 cut(s) 2978, 3256
AoxI GGCC 8 cut(s) 935, 1762, 2213, 2454, 2458, 2852, 2870, 3187
ApaI GGGCCC 1 cut(s) 2217
ApaLI GTGCAC 1 cut(s) 1973
ApoI RAATTY 1 cut(s) 289
ArsI GACNNNNNNTTYG 2 cut(s) 674, 706
Asp718I GGTACC 2 cut(s) 992, 2465
AspLEI GCGC 2 cut(s) 148, 1203
AspS9I GGNCC 7 cut(s) 338, 356, 467, 1313, 1877, 2213, 2214
AsuC2I CCSGG 4 cut(s) 261, 2913, 2979, 2980
AsuHPI GGTGA 8 cut(s) 298, 1439, 1443, 1496, 1903, 2320, 2579, 3089
AvaI CYCGRG 2 cut(s) 2978, 3256
AvaII GGWCC 5 cut(s) 338, 356, 467, 1313, 1877
AxyI CCTNAGG 1 cut(s) 1071
BaeGI GKGCMC 3 cut(s) 773, 1977, 2217
BamHI GGATCC 2 cut(s) 130, 166
BanI GGYRCC 5 cut(s) 733, 992, 1075, 2465, 2704
BanII GRGCYC 2 cut(s) 1334, 2217
BauI CACGAG 2 cut(s) 405, 638
BbrPI CACGTG 1 cut(s) 1667
BbsI GAAGAC 4 cut(s) 56, 1945, 2980, 3221
Bbv12I GWGCWC 2 cut(s) 1334, 1977
BbvCI CCTCAGC 1 cut(s) 1188
BccI CCATC 7 cut(s) 804, 946, 1754, 1789, 2526, 2731, 3128
BceAI ACGGC 4 cut(s) 721, 767, 1749, 2857
BcgI CGANNNNNNTGC 2 cut(s) 629, 663
BciT130I CCWGG 5 cut(s) 59, 252, 342, 759, 1788
BciVI GTATCC 1 cut(s) 2112
BclI TGATCA 1 cut(s) 1438
BcnI CCSGG 4 cut(s) 261, 2913, 2979, 2980
BcuI ACTAGT 1 cut(s) 530
BfaI CTAG 5 cut(s) 531, 1169, 2202, 2586, 2850
BfmI CTRYAG 7 cut(s) 231, 585, 1157, 2262, 2508, 2626, 2808
BfrI CTTAAG 1 cut(s) 2672
BfuAI ACCTGC 3 cut(s) 1865, 2081, 2762
BfuI GTATCC 1 cut(s) 2112
BglII AGATCT 1 cut(s) 2287
Bme1390I CCNGG 9 cut(s) 59, 252, 261, 342, 759, 1788, 2913, 2979, 2980
Bme18I GGWCC 5 cut(s) 338, 356, 467, 1313, 1877
BmeT110I CYCGRG 2 cut(s) 2978, 3256
BmgT120I GGNCC 7 cut(s) 338, 356, 467, 1313, 1877, 2213, 2214
BmrFI CCNGG 9 cut(s) 59, 252, 261, 342, 759, 1788, 2913, 2979, 2980
BmrI ACTGGG 2 cut(s) 1565, 2241
BmsI GCATC 5 cut(s) 304, 583, 2887, 3070, 3171
BmuI ACTGGG 2 cut(s) 1565, 2241
BpiI GAAGAC 4 cut(s) 56, 1945, 2980, 3221
BplI GAGNNNNNCTC 4 cut(s) 1316, 1348, 1321, 1353
BpmI CTGGAG 2 cut(s) 643, 1575
Bpu10I CCTNAGC 4 cut(s) 363, 1188, 1744, 2712
BpuEI CTTGAG 4 cut(s) 98, 1375, 1644, 2070
BpuMI CCSGG 4 cut(s) 261, 2913, 2979, 2980
BsaAI YACGTR 1 cut(s) 1667
BsaI GGTCTC 4 cut(s) 134, 241, 1102, 2483
BsaJI CCNNGG 9 cut(s) 239, 757, 1340, 1513, 1787, 2461, 2544, 2873, 2978
BsaWI WCCGGW 2 cut(s) 2330, 2606
BsaXI ACNNNNNCTCC 6 cut(s) 1370, 1400, 2428, 2458, 2907, 2937
Bse118I RCCGGY 4 cut(s) 317, 957, 2456, 2701
Bse1I ACTGG 9 cut(s) 529, 612, 660, 735, 1503, 1571, 1943, 2247, 2479
Bse21I CCTNAGG 1 cut(s) 1071
Bse3DI GCAATG 2 cut(s) 114, 1819
BseBI CCWGG 5 cut(s) 59, 252, 342, 759, 1788
BseDI CCNNGG 9 cut(s) 239, 757, 1340, 1513, 1787, 2461, 2544, 2873, 2978
BseGI GGATG 6 cut(s) 598, 799, 895, 1499, 2518, 2902
BseMI GCAATG 2 cut(s) 114, 1819
BseNI ACTGG 9 cut(s) 529, 612, 660, 735, 1503, 1571, 1943, 2247, 2479
BseRI GAGGAG 3 cut(s) 1329, 3067, 3248
BseSI GKGCMC 3 cut(s) 773, 1977, 2217
BseX3I CGGCCG 1 cut(s) 2870
BseYI CCCAGC 6 cut(s) 685, 1714, 1967, 2230, 2387, 2549
BsgI GTGCAG 6 cut(s) 633, 1050, 1527, 2352, 2475, 3090
Bsh1236I CGCG 1 cut(s) 146
Bsh1285I CGRYCG 3 cut(s) 962, 1961, 2873
BshFI GGCC 8 cut(s) 937, 1764, 2215, 2456, 2460, 2854, 2872, 3189
BshNI GGYRCC 5 cut(s) 733, 992, 1075, 2465, 2704
BsiEI CGRYCG 3 cut(s) 962, 1961, 2873
BsiHKAI GWGCWC 2 cut(s) 1334, 1977
BsiHKCI CYCGRG 2 cut(s) 2978, 3256
BslFI GGGAC 3 cut(s) 2179, 2521, 2891
BsmBI CGTCTC 1 cut(s) 2966
BsmFI GGGAC 3 cut(s) 2179, 2521, 2891
BsmI GAATGC 2 cut(s) 261, 617
BsnI GGCC 8 cut(s) 937, 1764, 2215, 2456, 2460, 2854, 2872, 3189
Bso31I GGTCTC 4 cut(s) 134, 241, 1102, 2483
BsoBI CYCGRG 2 cut(s) 2978, 3256
Bsp120I GGGCCC 1 cut(s) 2213
Bsp1286I GDGCHC 4 cut(s) 773, 1334, 1977, 2217
Bsp19I CCATGG 2 cut(s) 2461, 2544
BspANI GGCC 8 cut(s) 937, 1764, 2215, 2456, 2460, 2854, 2872, 3189
BspFNI CGCG 1 cut(s) 146
BspHI TCATGA 1 cut(s) 175
BspMAI CTGCAG 6 cut(s) 235, 589, 1161, 2266, 2512, 2812
BspMI ACCTGC 3 cut(s) 1865, 2081, 2762
BspPI GGATC 6 cut(s) 49, 125, 138, 161, 174, 716
BspQI GCTCTTC 2 cut(s) 1322, 2230
BspT107I GGYRCC 5 cut(s) 733, 992, 1075, 2465, 2704
BspTI CTTAAG 1 cut(s) 2672
BspTNI GGTCTC 4 cut(s) 134, 241, 1102, 2483
BsrBI CCGCTC 2 cut(s) 362, 1743
BsrDI GCAATG 2 cut(s) 114, 1819
BsrFI RCCGGY 4 cut(s) 317, 957, 2456, 2701
BsrI ACTGG 9 cut(s) 529, 612, 660, 735, 1503, 1571, 1943, 2247, 2479
BssAI RCCGGY 4 cut(s) 317, 957, 2456, 2701
BssECI CCNNGG 9 cut(s) 239, 757, 1340, 1513, 1787, 2461, 2544, 2873, 2978
BssNAI GTATAC 1 cut(s) 2323
BssSI CACGAG 2 cut(s) 405, 638
BssT1I CCWWGG 3 cut(s) 1513, 2461, 2544
Bst1107I GTATAC 1 cut(s) 2323
Bst2BI CACGAG 2 cut(s) 405, 638
Bst2UI CCWGG 5 cut(s) 59, 252, 342, 759, 1788
Bst4CI ACNGT 8 cut(s) 243, 499, 1386, 1543, 2009, 2535, 2730, 2947
Bst6I CTCTTC 2 cut(s) 1322, 2230
BstAFI CTTAAG 1 cut(s) 2672
BstAPI GCANNNNNTGC 2 cut(s) 593, 2123
BstBAI YACGTR 1 cut(s) 1667
BstDSI CCRYGG 4 cut(s) 239, 2461, 2544, 2873
BstENI CCTNNNNNAGG 1 cut(s) 2088
BstF5I GGATG 6 cut(s) 598, 799, 895, 1499, 2518, 2902
BstFNI CGCG 1 cut(s) 146
BstHHI GCGC 2 cut(s) 148, 1203
BstMCI CGRYCG 3 cut(s) 962, 1961, 2873
BstNI CCWGG 5 cut(s) 59, 252, 342, 759, 1788
BstNSI RCATGY 4 cut(s) 708, 2435, 3149, 3176
BstSCI CCNGG 9 cut(s) 57, 250, 259, 340, 757, 1786, 2911, 2977, 2978
BstSFI CTRYAG 7 cut(s) 231, 585, 1157, 2262, 2508, 2626, 2808
BstSLI GKGCMC 3 cut(s) 773, 1977, 2217
BstUI CGCG 1 cut(s) 146
BstV2I GAAGAC 4 cut(s) 56, 1945, 2980, 3221
BstX2I RGATCY 3 cut(s) 130, 166, 2287
BstXI CCANNNNNNTGG 1 cut(s) 2821
BstYI RGATCY 3 cut(s) 130, 166, 2287
BstZ17I GTATAC 1 cut(s) 2323
BstZI CGGCCG 1 cut(s) 2870
Bsu36I CCTNAGG 1 cut(s) 1071
BsuI GTATCC 1 cut(s) 2112
BsuRI GGCC 8 cut(s) 937, 1764, 2215, 2456, 2460, 2854, 2872, 3189
BtgI CCRYGG 4 cut(s) 239, 2461, 2544, 2873
BtgZI GCGATG 2 cut(s) 1506, 3147
BtsCI GGATG 6 cut(s) 598, 799, 895, 1499, 2518, 2902
BtsI GCAGTG 2 cut(s) 594, 2144
BtsIMutI CAGTG 7 cut(s) 594, 619, 1315, 1510, 1539, 1578, 2144
BveI ACCTGC 3 cut(s) 1865, 2081, 2762
CaiI CAGNNNCTG 6 cut(s) 341, 764, 1751, 1949, 2120, 2123
CciI TCATGA 1 cut(s) 175
CfoI GCGC 2 cut(s) 148, 1203
Cfr10I RCCGGY 4 cut(s) 317, 957, 2456, 2701
Cfr13I GGNCC 7 cut(s) 338, 356, 467, 1313, 1877, 2213, 2214
Cfr9I CCCGGG 1 cut(s) 2978
CseI GACGC 2 cut(s) 678, 3104
EaeI YGGCCR 4 cut(s) 935, 1762, 2458, 2870
EagI CGGCCG 1 cut(s) 2870
Eam1104I CTCTTC 2 cut(s) 1322, 2230
EarI CTCTTC 2 cut(s) 1322, 2230
EciI GGCGGA 1 cut(s) 2025
Ecl136II GAGCTC 1 cut(s) 1332
EclXI CGGCCG 1 cut(s) 2870
Eco130I CCWWGG 3 cut(s) 1513, 2461, 2544
Eco147I AGGCCT 1 cut(s) 2854
Eco24I GRGCYC 2 cut(s) 1334, 2217
Eco31I GGTCTC 4 cut(s) 134, 241, 1102, 2483
Eco47I GGWCC 5 cut(s) 338, 356, 467, 1313, 1877
Eco52I CGGCCG 1 cut(s) 2870
Eco53kI GAGCTC 1 cut(s) 1332
Eco57I CTGAAG 2 cut(s) 146, 2877
Eco72I CACGTG 1 cut(s) 1667
Eco81I CCTNAGG 1 cut(s) 1071
Eco88I CYCGRG 2 cut(s) 2978, 3256
EcoICRI GAGCTC 1 cut(s) 1332
EcoNI CCTNNNNNAGG 1 cut(s) 2088
EcoO109I RGGNCCY 2 cut(s) 338, 2214
EcoRII CCWGG 5 cut(s) 57, 250, 340, 757, 1786
EcoT14I CCWWGG 3 cut(s) 1513, 2461, 2544
EcoT38I GRGCYC 2 cut(s) 1334, 2217
ErhI CCWWGG 3 cut(s) 1513, 2461, 2544
Esp3I CGTCTC 1 cut(s) 2966
FalI AAGNNNNNCTT 2 cut(s) 2913, 2945
FaqI GGGAC 3 cut(s) 2179, 2521, 2891
FauI CCCGC 2 cut(s) 367, 2945
FauNDI CATATG 1 cut(s) 1461
FbaI TGATCA 1 cut(s) 1438
FblI GTMKAC 2 cut(s) 692, 2322
FokI GGATG 6 cut(s) 605, 786, 882, 1486, 2505, 2909
FriOI GRGCYC 2 cut(s) 1334, 2217
FseI GGCCGGCC 1 cut(s) 2460
FspBI CTAG 5 cut(s) 531, 1169, 2202, 2586, 2850
GlaI GCGC 2 cut(s) 147, 1202
GsaI CCCAGC 6 cut(s) 689, 1718, 1971, 2234, 2391, 2553
GsuI CTGGAG 2 cut(s) 643, 1575
HaeIII GGCC 8 cut(s) 937, 1764, 2215, 2456, 2460, 2854, 2872, 3189
HgaI GACGC 2 cut(s) 678, 3104
HhaI GCGC 2 cut(s) 148, 1203
Hin6I GCGC 2 cut(s) 146, 1201
HinP1I GCGC 2 cut(s) 146, 1201
HincII GTYRAC 1 cut(s) 2560
HindII GTYRAC 1 cut(s) 2560
HindIII AAGCTT 2 cut(s) 1270, 1687
HphI GGTGA 8 cut(s) 298, 1439, 1443, 1496, 1903, 2320, 2579, 3089
Hpy166II GTNNAC 7 cut(s) 305, 693, 1975, 2323, 2560, 2669, 2767
Hpy8I GTNNAC 7 cut(s) 305, 693, 1975, 2323, 2560, 2669, 2767
HpyCH4III ACNGT 8 cut(s) 243, 499, 1386, 1543, 2009, 2535, 2730, 2947
HpyCH4IV ACGT 4 cut(s) 193, 781, 1233, 1666
HpySE526I ACGT 4 cut(s) 193, 781, 1233, 1666
HspAI GCGC 2 cut(s) 146, 1201
KpnI GGTACC 2 cut(s) 996, 2469
KroI GCCGGC 1 cut(s) 2456
KroNI GCCGGC 1 cut(s) 2458
Ksp22I TGATCA 1 cut(s) 1438
LguI GCTCTTC 2 cut(s) 1322, 2230
LweI GCATC 5 cut(s) 304, 583, 2887, 3070, 3171
MaeI CTAG 5 cut(s) 531, 1169, 2202, 2586, 2850
MaeII ACGT 4 cut(s) 193, 781, 1233, 1666
MbiI CCGCTC 2 cut(s) 362, 1743
MflI RGATCY 3 cut(s) 130, 166, 2287
MhlI GDGCHC 4 cut(s) 773, 1334, 1977, 2217
MluCI AATT 7 cut(s) 289, 946, 1175, 1205, 1591, 1617, 1733
MlyI GAGTC 8 cut(s) 236, 1250, 1636, 2142, 2873, 3034, 3211, 3310
MmeI TCCRAC 5 cut(s) 1798, 1904, 1981, 2471, 2747
MroNI GCCGGC 1 cut(s) 2456
MseI TTAA 3 cut(s) 2019, 2393, 2673
MslI CAYNNNNRTG 4 cut(s) 2195, 2356, 2772, 3345
MspA1I CMGCKG 5 cut(s) 1967, 2120, 2234, 2507, 2513
MspCI CTTAAG 1 cut(s) 2672
MspR9I CCNGG 9 cut(s) 59, 252, 261, 342, 759, 1788, 2913, 2979, 2980
Mva1269I GAATGC 2 cut(s) 261, 617
MvaI CCWGG 5 cut(s) 59, 252, 342, 759, 1788
MvnI CGCG 1 cut(s) 146
NaeI GCCGGC 1 cut(s) 2458
NciI CCSGG 4 cut(s) 261, 2913, 2979, 2980
NcoI CCATGG 2 cut(s) 2461, 2544
NdeI CATATG 1 cut(s) 1461
NgoMIV GCCGGC 1 cut(s) 2456
NmeAIII GCCGAG 1 cut(s) 1657
NmuCI GTSAC 9 cut(s) 194, 1107, 1891, 2009, 2434, 3092, 3148, 3175, 3301
NspI RCATGY 4 cut(s) 708, 2435, 3149, 3176
OliI CACNNNNGTG 1 cut(s) 2772
PaeI GCATGC 1 cut(s) 708
PaeR7I CTCGAG 1 cut(s) 3256
PagI TCATGA 1 cut(s) 175
PaqCI CACCTGC 2 cut(s) 2081, 2762
PceI AGGCCT 1 cut(s) 2854
PciI ACATGT 1 cut(s) 3172
PciSI GCTCTTC 2 cut(s) 1322, 2230
PcsI WCGNNNNNNNCGW 1 cut(s) 575
PctI GAATGC 2 cut(s) 261, 617
PdiI GCCGGC 1 cut(s) 2458
PfeI GAWTC 8 cut(s) 211, 746, 1133, 1370, 1526, 1655, 2999, 3242
PflFI GACNNNGTC 1 cut(s) 2728
PflMI CCANNNNNTGG 3 cut(s) 1787, 2056, 2545
PfoI TCCNGGA 2 cut(s) 57, 340
PleI GAGTC 8 cut(s) 235, 1249, 1635, 2141, 2873, 3034, 3211, 3310
PmaCI CACGTG 1 cut(s) 1667
PmlI CACGTG 1 cut(s) 1667
PpsI GAGTC 8 cut(s) 235, 1249, 1635, 2141, 2873, 3034, 3211, 3310
Ppu21I YACGTR 1 cut(s) 1667
PpuMI RGGWCCY 1 cut(s) 338
PscI ACATGT 1 cut(s) 3172
PsiI TTATAA 1 cut(s) 2241
Psp124BI GAGCTC 1 cut(s) 1334
Psp5II RGGWCCY 1 cut(s) 338
Psp6I CCWGG 5 cut(s) 57, 250, 340, 757, 1786
PspCI CACGTG 1 cut(s) 1667
PspFI CCCAGC 6 cut(s) 685, 1714, 1967, 2230, 2387, 2549
PspGI CCWGG 5 cut(s) 57, 250, 340, 757, 1786
PspOMI GGGCCC 1 cut(s) 2213
PspPI GGNCC 7 cut(s) 338, 356, 467, 1313, 1877, 2213, 2214
PspPPI RGGWCCY 1 cut(s) 338
PspXI VCTCGAGB 1 cut(s) 3256
PstI CTGCAG 6 cut(s) 235, 589, 1161, 2266, 2512, 2812
PstNI CAGNNNCTG 6 cut(s) 341, 764, 1751, 1949, 2120, 2123
PsuI RGATCY 3 cut(s) 130, 166, 2287
PsyI GACNNNGTC 1 cut(s) 2728
PvuII CAGCTG 5 cut(s) 1967, 2120, 2234, 2507, 2513
RigI GGCCGGCC 1 cut(s) 2460
RseI CAYNNNNRTG 4 cut(s) 2195, 2356, 2772, 3345
SacI GAGCTC 1 cut(s) 1334
SapI GCTCTTC 2 cut(s) 1322, 2230
SaqAI TTAA 3 cut(s) 2019, 2393, 2673
Sau96I GGNCC 7 cut(s) 338, 356, 467, 1313, 1877, 2213, 2214
SchI GAGTC 8 cut(s) 236, 1250, 1636, 2142, 2873, 3034, 3211, 3310
ScrFI CCNGG 9 cut(s) 59, 252, 261, 342, 759, 1788, 2913, 2979, 2980
SduI GDGCHC 4 cut(s) 773, 1334, 1977, 2217
SfaNI GCATC 5 cut(s) 304, 583, 2887, 3070, 3171
SfcI CTRYAG 7 cut(s) 231, 585, 1157, 2262, 2508, 2626, 2808
Sfr274I CTCGAG 1 cut(s) 3256
SinI GGWCC 5 cut(s) 338, 356, 467, 1313, 1877
SlaI CTCGAG 1 cut(s) 3256
SmaI CCCGGG 1 cut(s) 2980
SmiMI CAYNNNNRTG 4 cut(s) 2195, 2356, 2772, 3345
SmlI CTYRAG 6 cut(s) 113, 1390, 1659, 2085, 2672, 3256
SmoI CTYRAG 6 cut(s) 113, 1390, 1659, 2085, 2672, 3256
SpeI ACTAGT 1 cut(s) 530
SphI GCATGC 1 cut(s) 708
Sse9I AATT 7 cut(s) 289, 946, 1175, 1205, 1591, 1617, 1733
SseBI AGGCCT 1 cut(s) 2854
SspI AATATT 1 cut(s) 2054
SspMI CTAG 5 cut(s) 531, 1169, 2202, 2586, 2850
SstI GAGCTC 1 cut(s) 1334
StuI AGGCCT 1 cut(s) 2854
StyD4I CCNGG 9 cut(s) 57, 250, 259, 340, 757, 1786, 2911, 2977, 2978
StyI CCWWGG 3 cut(s) 1513, 2461, 2544
TaaI ACNGT 8 cut(s) 243, 499, 1386, 1543, 2009, 2535, 2730, 2947
TaiI ACGT 4 cut(s) 196, 784, 1236, 1669
TaqI TCGA 5 cut(s) 578, 2997, 3231, 3245, 3257
TaqII GACCGA 1 cut(s) 1332
TasI AATT 7 cut(s) 289, 946, 1175, 1205, 1591, 1617, 1733
TatI WGTACW 3 cut(s) 727, 1696, 1803
TauI GCSGC 2 cut(s) 2710, 2872
TfiI GAWTC 8 cut(s) 211, 746, 1133, 1370, 1526, 1655, 2999, 3242
Tru1I TTAA 3 cut(s) 2019, 2393, 2673
Tru9I TTAA 3 cut(s) 2019, 2393, 2673
TscAI CASTG 7 cut(s) 594, 619, 1315, 1510, 1546, 1578, 2151
TseFI GTSAC 9 cut(s) 194, 1107, 1891, 2009, 2434, 3092, 3148, 3175, 3301
Tsp45I GTSAC 9 cut(s) 194, 1107, 1891, 2009, 2434, 3092, 3148, 3175, 3301
TspDTI ATGAA 8 cut(s) 164, 285, 891, 1539, 2298, 2340, 2391, 2995
TspGWI ACGGA 1 cut(s) 2948
TspMI CCCGGG 1 cut(s) 2978
TspRI CASTG 7 cut(s) 594, 619, 1315, 1510, 1546, 1578, 2151
Tth111I GACNNNGTC 1 cut(s) 2728
Van91I CCANNNNNTGG 3 cut(s) 1787, 2056, 2545
Vha464I CTTAAG 1 cut(s) 2672
VneI GTGCAC 1 cut(s) 1973
VpaK11BI GGWCC 5 cut(s) 338, 356, 467, 1313, 1877
XagI CCTNNNNNAGG 1 cut(s) 2088
XapI RAATTY 1 cut(s) 289
XbaI TCTAGA 1 cut(s) 2585
XceI RCATGY 4 cut(s) 708, 2435, 3149, 3176
XcmI CCANNNNNNNNNTGG 1 cut(s) 2546
XhoI CTCGAG 1 cut(s) 3256
XmaI CCCGGG 1 cut(s) 2978
XmiI GTMKAC 2 cut(s) 692, 2322
XspI CTAG 5 cut(s) 531, 1169, 2202, 2586, 2850
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.