Rmu_sc0014073.1_g000001

Protein of unknown function (DUF1296)

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014073.1
Physical Location & Seq
Reverse (-)
1 .. 1053
1053 bp
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UTR
Exon/CDS
Intron
Rmu_sc0014073.1_g000001.1.cds

Sequence Viewer

Length: 166 bp
atgagtagtggtggtgggtttagggtttcaatcccaaacagtgtgaggaagacgatccaggacatcaaagagatcacaggcaatcacagcgaggaagaaatctatgcaatgctcaaggaatgtaacatggatcccaacgagaccgcgcagaaacttctccttcagg
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

55

Amino Acids

6.15

Weight (kDa)

5.16

Isoelectric Point (pI)

61.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 146
AciI CCGC 1 cut(s) 144
AclWI GGATC 3 cut(s) 49, 125, 138
AcuI CTGAAG 1 cut(s) 146
AgsI TTSAA 1 cut(s) 30
AjnI CCWGG 1 cut(s) 57
Alw26I GTCTC 1 cut(s) 134
AlwI GGATC 3 cut(s) 49, 125, 138
AspLEI GCGC 1 cut(s) 148
BamHI GGATCC 1 cut(s) 130
BbsI GAAGAC 1 cut(s) 56
BciT130I CCWGG 1 cut(s) 59
BcoDI GTCTC 1 cut(s) 134
Bme1390I CCNGG 1 cut(s) 59
BmiI GGNNCC 1 cut(s) 132
BmrFI CCNGG 1 cut(s) 59
BpiI GAAGAC 1 cut(s) 56
BpuEI CTTGAG 1 cut(s) 98
BsaI GGTCTC 1 cut(s) 134
Bse3DI GCAATG 1 cut(s) 114
BseBI CCWGG 1 cut(s) 59
BseMI GCAATG 1 cut(s) 114
Bsh1236I CGCG 1 cut(s) 146
BsmAI GTCTC 1 cut(s) 134
Bso31I GGTCTC 1 cut(s) 134
Bsp143I GATC 3 cut(s) 54, 72, 130
BspACI CCGC 1 cut(s) 144
BspFNI CGCG 1 cut(s) 146
BspLI GGNNCC 1 cut(s) 132
BspPI GGATC 3 cut(s) 49, 125, 138
BspTNI GGTCTC 1 cut(s) 134
BsrDI GCAATG 1 cut(s) 114
BssMI GATC 3 cut(s) 54, 72, 130
Bst2UI CCWGG 1 cut(s) 59
Bst4CI ACNGT 1 cut(s) 41
BstFNI CGCG 1 cut(s) 146
BstHHI GCGC 1 cut(s) 148
BstKTI GATC 3 cut(s) 57, 75, 133
BstMAI GTCTC 1 cut(s) 134
BstMBI GATC 3 cut(s) 54, 72, 130
BstMWI GCNNNNNNNGC 1 cut(s) 87
BstNI CCWGG 1 cut(s) 59
BstSCI CCNGG 1 cut(s) 57
BstUI CGCG 1 cut(s) 146
BstV2I GAAGAC 1 cut(s) 56
BstX2I RGATCY 1 cut(s) 130
BstYI RGATCY 1 cut(s) 130
BtsIMutI CAGTG 1 cut(s) 46
CfoI GCGC 1 cut(s) 148
CviAII CATG 1 cut(s) 127
DpnI GATC 3 cut(s) 56, 74, 132
DpnII GATC 3 cut(s) 54, 72, 130
Eco31I GGTCTC 1 cut(s) 134
Eco57I CTGAAG 1 cut(s) 146
EcoRII CCWGG 1 cut(s) 57
FaeI CATG 1 cut(s) 130
FaiI YATR 2 cut(s) 105, 128
FatI CATG 1 cut(s) 126
GlaI GCGC 1 cut(s) 147
HhaI GCGC 1 cut(s) 148
Hin1II CATG 1 cut(s) 130
Hin6I GCGC 1 cut(s) 146
HinP1I GCGC 1 cut(s) 146
HpyCH4III ACNGT 1 cut(s) 41
HpyCH4V TGCA 1 cut(s) 107
HpyF10VI GCNNNNNNNGC 1 cut(s) 87
Hsp92II CATG 1 cut(s) 130
HspAI GCGC 1 cut(s) 146
Kzo9I GATC 3 cut(s) 54, 72, 130
LpnPI CCDG 4 cut(s) 44, 63, 71, 149
MaeIII GTNAC 1 cut(s) 122
MalI GATC 3 cut(s) 56, 74, 132
MboI GATC 3 cut(s) 54, 72, 130
MboII GAAGA 2 cut(s) 61, 107
MflI RGATCY 1 cut(s) 130
MnlI CCTC 2 cut(s) 39, 85
MspR9I CCNGG 1 cut(s) 59
MvaI CCWGG 1 cut(s) 59
MvnI CGCG 1 cut(s) 146
MwoI GCNNNNNNNGC 1 cut(s) 87
NdeII GATC 3 cut(s) 54, 72, 130
NlaIII CATG 1 cut(s) 130
NlaIV GGNNCC 1 cut(s) 132
PfoI TCCNGGA 1 cut(s) 57
Psp6I CCWGG 1 cut(s) 57
PspGI CCWGG 1 cut(s) 57
PspN4I GGNNCC 1 cut(s) 132
PsuI RGATCY 1 cut(s) 130
Sau3AI GATC 3 cut(s) 54, 72, 130
ScrFI CCNGG 1 cut(s) 59
SgeI CNNG 8 cut(s) 70, 71, 90, 103, 127, 139, 151, 157
SmlI CTYRAG 1 cut(s) 113
SmoI CTYRAG 1 cut(s) 113
SsiI CCGC 1 cut(s) 144
StyD4I CCNGG 1 cut(s) 57
TaaI ACNGT 1 cut(s) 41
TscAI CASTG 1 cut(s) 46
TspRI CASTG 1 cut(s) 46
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.