Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0007082

Physical Location & Seq

Genomic Coordinates Reverse (-)

74251435 .. 74259776

Gene Structure 8342 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG515200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2229 bp

ATGTTTAAAATCATTTACAGCTCTGTACCTGTGATTGTGGGTGGTCCTTCCAATGTGGCTTCGGGAACTACTACTGTTGTGCCTGCCTCACAGTTATCTACTGGAACTAGTGCTGAAATAAGTTTGTCATTGGTTGGGGATAAATCGGGTAGCTCGGTCTCTGCAGTGGATGCAAAAAAAATCCCCACCAGTGCATTCGGAAATGAGGACTTGCACGAGCAGGCTGCACCAAGCTCCAGTAGTAGCTCAGTTTTGCCAAACCCAGCGTCTACATTGGGAGCATGCTTTTCCCCCTCTGATCCTGTACTGGTGCCGTCTAATGATTCACGGCTCCCAGGTTCTGTGGGCACAATCAAACGTGAAGTTGTGAGCCATCATCCTCCTGCTTCTGAGGTTGGCAGCTCTTTAGCACAAGGAAAAACAACAAGCAAAACACAGGGAGGTGGGAAAACTCAGCCCTCTGATTTTTCACATCCTTCATCTACATCAACTCATGGCGGTTCGGTTAGTCGGCCATCATCTAATTATAGTAGCCGGTCGCAACAACTAATTGGCACTCAAAAAGCAGTTGGTACCAACAAGGAGTGGAAACCAAAGCCCATAGTTTCTGCTGTTGTTCAAGGTCAAGCAACAGCTAATGTAGCTGCACCTGAGGTGCCTGCTGATTTGGTAGAGGTCTCTCCGCAGTCACAACCTGTTTCAAGTGTCCTTGATTCGGAAGAAGCAACTTCAAAACTGCAGAAGAAGCTAGAGGAATTACACCTTCCACAGCTTCCACAGCGCAAATTAGTTATTCTTCCAAATCACATACACGTTCCTGAGTCTGAACGAAACAAGTTGAGTTTTGGAAGCTTTGGGGCAACTTTTGGCATAACGAATAGCTATGTCAGTGGTCCTGAGAGTGAGAAGAGCTCTACTCCTCGGTCTGAAACTTCTCAGGTTATTGAAGAATCTGTGGAGGAACAGTCCTCAAGCAATCAAACTGTGTTGGCAACTGCCGATGAGGGTGATTTTCCTGATCATTCGCAATCACCTACTCATATGCTTGAAAATCTATCATCTGGTGAGGGTGAGGGTGAGGGCGATGTCTCATCCAGTGCAGCCCAAGGACATAATGAATCTAAGCATGACACTGTATTGACTTCTGGAGGTCATCAGCTCCCAGTGGCTAATACTTCTCCGAATTATAGTTTTGGTATTGTACCTCCAATTTTAGGGAGTCAGCTTGCGGCATTTGAAAACTCTGAATCTCAAGCACGTGATATATCTCGGCTTCCAAGCTTTGTAGTACAACAACCCCTTGACCCAGCAAGTTATTATGCCCAATTTTACCGCTCAGGTGCTGATAGTGATGGCCGTCTTTCTCCTTTTCCATCTCCTGGGGTATCAACAAAGTACAATGGCAATGTTGGAGTATTGCCTCCAAGTTCTCAGTCTCCACAAGAGGGTGGGGTTCTTTCAGCAGCAGGTCCAACACCATTGGTGACACAGGCTTCTGGGCTTGTGCAAAGCTCAATAGCTGTAACTCAGCAGCCAGTTCCTGTCTTCCGACCGCCAGCTGGGGTGCACATACCTCATTATGCTAACTACATTCCTTACAGTCACTACTTTAACCCATTCTATGTTCCGCCTCCTATCCACCAATATTTGGGTAATGGAGCATTTCCTCAACAACCTCAAGCAGGTGGTGTGTATCCAGCTCCACCAGCAGCTGCTGCCACAGGAGTCAAATACTCACTGCCACAATACAAAGCAGGGACTAATACAGGAAACTCAAATCACATGGGAATGGCAAGTGGATATGGGCCCTATGGCTCTTCCCCAGCTGGTTATAATCCCAGTCCTGCCACGACTGCAGGAAACACTACTCCCAATGAAGATCTTAGCACATCTCAGTTCAAGGAGAGTAATGTATACATCACCGGACAGCAGAGTGAAGGTTCATCTGTATGGGTTGCTGCACCTAACCGAGAAATGCCCAACTTAACAAGTTCATTTTACAACCTTCCTCCACAGAGTCAGCATGTGACTTTCACTCCAACGCAGGCTGGCCATGGTACATTTGCTGGTCTCTACCACCCTGCACAAGCAGTATCAGCTGCAGCTGTCCATCCACTTCTGCAACAGTCCCAAACCATGGCTGGGGCAGTTGACATGGTGGGACCTGGGGGAAGTGTTTATCAGCAGCCTCAGCATGCACAACAAATCAACTGGCCGAGCAACTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1296

Protein Analysis

742

Amino Acids

77.23

Weight (kDa)

5.72

Isoelectric Point (pI)

62.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007082)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55820 AT3G13222
fragaria_vesca	FvH4_6g40450 FvH4_6g40450 FvH4_6g40450 FvH4_6g40450 FvH4_6g40450
prunus_persica	Prupe.3G193000_v2.0.a1 Prupe.3G193000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0155681
rosa_laevigata	RLG00000020854
rosa_multiflora	Rmu_co8254459.1_g000001 Rmu_co8366137.1_g000001 Rmu_sc0014073.1_g000001 Rmu_sc0042011.1_g000001 Rmu_ssc0000223.1_g000001
rosa_roxburghii	Rroxscaffold_2G00093560
rosa_rugosa	Rorug02G0449100 Rorug02G0449200 Rorug02G0449300
rosa_samantha	Rh2AG515200 Rh2BG526300 Rh2CG500100 Rh2DG535100
rosa_wichuraiana	Rw2G042340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1833
AarI	CACCTGC	1 cut(s)	1673
Acc36I	ACCTGC	2 cut(s)	1457, 1673
Acc65I	GGTACC	1 cut(s)	572
AccB1I	GGYRCC	3 cut(s)	310, 572, 655
AccB7I	CCANNNNNTGG	3 cut(s)	1379, 1648, 2137
AccBSI	CCGCTC	1 cut(s)	1335
AccI	GTMKAC	2 cut(s)	269, 1914
AciI	CCGC	6 cut(s)	498, 683, 1229, 1333, 1553, 1628
AclWI	GGATC	1 cut(s)	293
AcoI	YGGCCR	4 cut(s)	512, 1354, 2050, 2213
AcvI	CACGTG	1 cut(s)	1259
AfaI	GTAC	7 cut(s)	27, 306, 574, 1203, 1290, 1397, 2059
AfiI	CCNNNNNNNGG	9 cut(s)	715, 1214, 1379, 1445, 1559, 1648, 1682, 2137, 2142
AflIII	ACRYGT	1 cut(s)	811
AgsI	TTSAA	7 cut(s)	620, 702, 732, 947, 1049, 1238, 1900
AhlI	ACTAGT	1 cut(s)	107
AjnI	CCWGG	3 cut(s)	334, 1378, 2164
Alw21I	GWGCWC	2 cut(s)	914, 1569
Alw26I	GTCTC	5 cut(s)	163, 682, 1093, 1440, 2075
Alw44I	GTGCAC	1 cut(s)	1565
AlwI	GGATC	1 cut(s)	293
AlwNI	CAGNNNCTG	5 cut(s)	341, 1343, 1541, 1712, 1715
AoxI	GGCC	5 cut(s)	512, 1354, 1805, 2050, 2213
ApaI	GGGCCC	1 cut(s)	1809
ApaLI	GTGCAC	1 cut(s)	1565
ArsI	GACNNNNNNTTYG	2 cut(s)	251, 283
Asp718I	GGTACC	1 cut(s)	572
AspLEI	GCGC	1 cut(s)	783
AspS9I	GGNCC	6 cut(s)	44, 893, 1469, 1805, 1806, 2162
AsuHPI	GGTGA	7 cut(s)	1019, 1023, 1076, 1082, 1088, 1495, 1912
AvaII	GGWCC	4 cut(s)	44, 893, 1469, 2162
AxyI	CCTNAGG	1 cut(s)	651
BaeGI	GKGCMC	3 cut(s)	350, 1569, 1809
BalI	TGGCCA	1 cut(s)	2052
BanI	GGYRCC	3 cut(s)	310, 572, 655
BanII	GRGCYC	2 cut(s)	914, 1809
BauI	CACGAG	1 cut(s)	215
BbrPI	CACGTG	1 cut(s)	1259
BbsI	GAAGAC	1 cut(s)	1537
Bbv12I	GWGCWC	2 cut(s)	914, 1569
BbvCI	CCTCAGC	1 cut(s)	2190
BccI	CCATC	5 cut(s)	381, 523, 1346, 1381, 2118
BceAI	ACGGC	3 cut(s)	298, 344, 1341
BcgI	CGANNNNNNTGC	2 cut(s)	206, 240
BciT130I	CCWGG	3 cut(s)	336, 1380, 2166
BciVI	GTATCC	1 cut(s)	1704
BclI	TGATCA	1 cut(s)	1018
BcoDI	GTCTC	5 cut(s)	163, 682, 1093, 1440, 2075
BcuI	ACTAGT	1 cut(s)	107
BfaI	CTAG	2 cut(s)	108, 749
BfmI	CTRYAG	4 cut(s)	162, 737, 1854, 2100
BfuAI	ACCTGC	2 cut(s)	1457, 1673
BfuI	GTATCC	1 cut(s)	1704
BglII	AGATCT	1 cut(s)	1879
Bme1390I	CCNGG	3 cut(s)	336, 1380, 2166
Bme18I	GGWCC	4 cut(s)	44, 893, 1469, 2162
BmgT120I	GGNCC	6 cut(s)	44, 893, 1469, 1805, 1806, 2162
BmiI	GGNNCC	6 cut(s)	312, 332, 574, 657, 1807, 2163
BmrFI	CCNGG	3 cut(s)	336, 1380, 2166
BmrI	ACTGGG	2 cut(s)	1157, 1833
BmsI	GCATC	1 cut(s)	160
BmuI	ACTGGG	2 cut(s)	1157, 1833
BpiI	GAAGAC	1 cut(s)	1537
BplI	GAGNNNNNCTC	4 cut(s)	896, 928, 901, 933
BpmI	CTGGAG	2 cut(s)	220, 1167
Bpu10I	CCTNAGC	2 cut(s)	1336, 2190
BpuEI	CTTGAG	3 cut(s)	955, 1236, 1662
BsaAI	YACGTR	1 cut(s)	1259
BsaI	GGTCTC	3 cut(s)	163, 682, 2075
BsaJI	CCNNGG	7 cut(s)	334, 920, 1105, 1379, 2053, 2136, 2165
BsaWI	WCCGGW	1 cut(s)	1922
BsaXI	ACNNNNNCTCC	4 cut(s)	950, 980, 2020, 2050
Bsc4I	CCNNNNNNNGG	9 cut(s)	715, 1214, 1379, 1445, 1559, 1648, 1682, 2137, 2142
Bse118I	RCCGGY	1 cut(s)	534
Bse1I	ACTGG	9 cut(s)	106, 189, 237, 312, 1095, 1163, 1535, 1839, 2216
Bse21I	CCTNAGG	1 cut(s)	651
Bse3DI	GCAATG	1 cut(s)	1411
BseBI	CCWGG	3 cut(s)	336, 1380, 2166
BseDI	CCNNGG	7 cut(s)	334, 920, 1105, 1379, 2053, 2136, 2165
BseGI	GGATG	5 cut(s)	175, 376, 472, 1091, 2110
BseLI	CCNNNNNNNGG	9 cut(s)	715, 1214, 1379, 1445, 1559, 1648, 1682, 2137, 2142
BseMI	GCAATG	1 cut(s)	1411
BseNI	ACTGG	9 cut(s)	106, 189, 237, 312, 1095, 1163, 1535, 1839, 2216
BseRI	GAGGAG	1 cut(s)	909
BseSI	GKGCMC	3 cut(s)	350, 1569, 1809
BseYI	CCCAGC	5 cut(s)	262, 1306, 1559, 1822, 2141
BsgI	GTGCAG	5 cut(s)	210, 630, 1119, 1944, 2067
Bsh1285I	CGRYCG	2 cut(s)	539, 1553
BshFI	GGCC	5 cut(s)	514, 1356, 1807, 2052, 2215
BshNI	GGYRCC	3 cut(s)	310, 572, 655
BsiEI	CGRYCG	2 cut(s)	539, 1553
BsiHKAI	GWGCWC	2 cut(s)	914, 1569
BsiSI	CCGG	2 cut(s)	535, 1923
BslFI	GGGAC	3 cut(s)	1771, 2113, 2175
BslI	CCNNNNNNNGG	9 cut(s)	715, 1214, 1379, 1445, 1559, 1648, 1682, 2137, 2142
BsmAI	GTCTC	5 cut(s)	163, 682, 1093, 1440, 2075
BsmFI	GGGAC	3 cut(s)	1771, 2113, 2175
BsmI	GAATGC	1 cut(s)	194
BsnI	GGCC	5 cut(s)	514, 1356, 1807, 2052, 2215
Bso31I	GGTCTC	3 cut(s)	163, 682, 2075
Bsp120I	GGGCCC	1 cut(s)	1805
Bsp1286I	GDGCHC	4 cut(s)	350, 914, 1569, 1809
Bsp143I	GATC	3 cut(s)	298, 1018, 1879
Bsp19I	CCATGG	2 cut(s)	2053, 2136
BspACI	CCGC	6 cut(s)	498, 683, 1229, 1333, 1553, 1628
BspANI	GGCC	5 cut(s)	514, 1356, 1807, 2052, 2215
BspLI	GGNNCC	6 cut(s)	312, 332, 574, 657, 1807, 2163
BspMAI	CTGCAG	4 cut(s)	166, 741, 1858, 2104
BspMI	ACCTGC	2 cut(s)	1457, 1673
BspPI	GGATC	1 cut(s)	293
BspQI	GCTCTTC	2 cut(s)	902, 1822
BspT107I	GGYRCC	3 cut(s)	310, 572, 655
BspTNI	GGTCTC	3 cut(s)	163, 682, 2075
BsrBI	CCGCTC	1 cut(s)	1335
BsrDI	GCAATG	1 cut(s)	1411
BsrFI	RCCGGY	1 cut(s)	534
BsrI	ACTGG	9 cut(s)	106, 189, 237, 312, 1095, 1163, 1535, 1839, 2216
BssAI	RCCGGY	1 cut(s)	534
BssECI	CCNNGG	7 cut(s)	334, 920, 1105, 1379, 2053, 2136, 2165
BssMI	GATC	3 cut(s)	298, 1018, 1879
BssNAI	GTATAC	1 cut(s)	1915
BssSI	CACGAG	1 cut(s)	215
BssT1I	CCWWGG	3 cut(s)	1105, 2053, 2136
Bst1107I	GTATAC	1 cut(s)	1915
Bst2BI	CACGAG	1 cut(s)	215
Bst2UI	CCWGG	3 cut(s)	336, 1380, 2166
Bst4CI	ACNGT	7 cut(s)	76, 93, 966, 985, 1135, 1601, 2127
Bst6I	CTCTTC	2 cut(s)	902, 1822
BstAPI	GCANNNNNTGC	2 cut(s)	170, 1715
BstBAI	YACGTR	1 cut(s)	1259
BstC8I	GCNNGC	9 cut(s)	84, 222, 283, 660, 1227, 1557, 2046, 2050, 2196
BstDSI	CCRYGG	2 cut(s)	2053, 2136
BstENI	CCTNNNNNAGG	1 cut(s)	1680
BstF5I	GGATG	5 cut(s)	175, 376, 472, 1091, 2110
BstHHI	GCGC	1 cut(s)	783
BstKTI	GATC	3 cut(s)	301, 1021, 1882
BstMAI	GTCTC	5 cut(s)	163, 682, 1093, 1440, 2075
BstMBI	GATC	3 cut(s)	298, 1018, 1879
BstMCI	CGRYCG	2 cut(s)	539, 1553
BstMWI	GCNNNNNNNGC	9 cut(s)	170, 641, 745, 778, 1706, 1715, 1853, 2096, 2191
BstNI	CCWGG	3 cut(s)	336, 1380, 2166
BstNSI	RCATGY	3 cut(s)	285, 2027, 2198
BstSCI	CCNGG	3 cut(s)	334, 1378, 2164
BstSFI	CTRYAG	4 cut(s)	162, 737, 1854, 2100
BstSLI	GKGCMC	3 cut(s)	350, 1569, 1809
BstV2I	GAAGAC	1 cut(s)	1537
BstX2I	RGATCY	1 cut(s)	1879
BstYI	RGATCY	1 cut(s)	1879
BstZ17I	GTATAC	1 cut(s)	1915
Bsu36I	CCTNAGG	1 cut(s)	651
BsuI	GTATCC	1 cut(s)	1704
BsuRI	GGCC	5 cut(s)	514, 1356, 1807, 2052, 2215
BtgI	CCRYGG	2 cut(s)	2053, 2136
BtgZI	GCGATG	1 cut(s)	1098
BtsCI	GGATG	5 cut(s)	175, 376, 472, 1091, 2110
BtsI	GCAGTG	2 cut(s)	171, 1736
BtsIMutI	CAGTG	7 cut(s)	171, 196, 895, 1102, 1131, 1170, 1736
BveI	ACCTGC	2 cut(s)	1457, 1673
Cac8I	GCNNGC	9 cut(s)	84, 222, 283, 660, 1227, 1557, 2046, 2050, 2196
CaiI	CAGNNNCTG	5 cut(s)	341, 1343, 1541, 1712, 1715
CfoI	GCGC	1 cut(s)	783
Cfr10I	RCCGGY	1 cut(s)	534
Cfr13I	GGNCC	6 cut(s)	44, 893, 1469, 1805, 1806, 2162
CseI	GACGC	1 cut(s)	255
Csp6I	GTAC	7 cut(s)	26, 305, 573, 1202, 1289, 1396, 2058
CviAII	CATG	9 cut(s)	282, 494, 1127, 1783, 2024, 2054, 2137, 2155, 2195
CviQI	GTAC	7 cut(s)	26, 305, 573, 1202, 1289, 1396, 2058
DpnI	GATC	3 cut(s)	300, 1020, 1881
DpnII	GATC	3 cut(s)	298, 1018, 1879
DraI	TTTAAA	1 cut(s)	7
EaeI	YGGCCR	4 cut(s)	512, 1354, 2050, 2213
Eam1104I	CTCTTC	2 cut(s)	902, 1822
EarI	CTCTTC	2 cut(s)	902, 1822
EciI	GGCGGA	1 cut(s)	1617
Ecl136II	GAGCTC	1 cut(s)	912
Eco130I	CCWWGG	3 cut(s)	1105, 2053, 2136
Eco24I	GRGCYC	2 cut(s)	914, 1809
Eco31I	GGTCTC	3 cut(s)	163, 682, 2075
Eco47I	GGWCC	4 cut(s)	44, 893, 1469, 2162
Eco53kI	GAGCTC	1 cut(s)	912
Eco72I	CACGTG	1 cut(s)	1259
Eco81I	CCTNAGG	1 cut(s)	651
EcoICRI	GAGCTC	1 cut(s)	912
EcoNI	CCTNNNNNAGG	1 cut(s)	1680
EcoO109I	RGGNCCY	2 cut(s)	1806, 2162
EcoRII	CCWGG	3 cut(s)	334, 1378, 2164
EcoT14I	CCWWGG	3 cut(s)	1105, 2053, 2136
EcoT38I	GRGCYC	2 cut(s)	914, 1809
ErhI	CCWWGG	3 cut(s)	1105, 2053, 2136
FaeI	CATG	9 cut(s)	285, 497, 1130, 1786, 2027, 2057, 2140, 2158, 2198
FaqI	GGGAC	3 cut(s)	1771, 2113, 2175
FatI	CATG	9 cut(s)	281, 493, 1126, 1782, 2023, 2053, 2136, 2154, 2194
FauNDI	CATATG	1 cut(s)	1041
FbaI	TGATCA	1 cut(s)	1018
FblI	GTMKAC	2 cut(s)	269, 1914
FokI	GGATG	5 cut(s)	182, 363, 459, 1078, 2097
FriOI	GRGCYC	2 cut(s)	914, 1809
FspBI	CTAG	2 cut(s)	108, 749
GlaI	GCGC	1 cut(s)	782
GsaI	CCCAGC	5 cut(s)	266, 1310, 1563, 1826, 2145
GsuI	CTGGAG	2 cut(s)	220, 1167
HaeIII	GGCC	5 cut(s)	514, 1356, 1807, 2052, 2215
HapII	CCGG	2 cut(s)	535, 1923
HgaI	GACGC	1 cut(s)	255
HhaI	GCGC	1 cut(s)	783
Hin1II	CATG	9 cut(s)	285, 497, 1130, 1786, 2027, 2057, 2140, 2158, 2198
Hin6I	GCGC	1 cut(s)	781
HinP1I	GCGC	1 cut(s)	781
HincII	GTYRAC	1 cut(s)	2152
HindII	GTYRAC	1 cut(s)	2152
HindIII	AAGCTT	2 cut(s)	850, 1279
HinfI	GANTC	9 cut(s)	323, 713, 821, 950, 1118, 1219, 1247, 1725, 2017
HpaII	CCGG	2 cut(s)	535, 1923
HphI	GGTGA	7 cut(s)	1019, 1023, 1076, 1082, 1088, 1495, 1912
Hpy166II	GTNNAC	4 cut(s)	270, 1567, 1915, 2152
Hpy188III	TCNNGA	5 cut(s)	63, 818, 896, 1016, 1146
Hpy8I	GTNNAC	4 cut(s)	270, 1567, 1915, 2152
HpyAV	CCTTC	5 cut(s)	57, 486, 773, 1931, 2015
HpyCH4III	ACNGT	7 cut(s)	76, 93, 966, 985, 1135, 1601, 2127
HpyCH4IV	ACGT	3 cut(s)	358, 813, 1258
HpyF10VI	GCNNNNNNNGC	9 cut(s)	170, 641, 745, 778, 1706, 1715, 1853, 2096, 2191
HpySE526I	ACGT	3 cut(s)	358, 813, 1258
Hsp92II	CATG	9 cut(s)	285, 497, 1130, 1786, 2027, 2057, 2140, 2158, 2198
HspAI	GCGC	1 cut(s)	781
KpnI	GGTACC	1 cut(s)	576
Ksp22I	TGATCA	1 cut(s)	1018
Kzo9I	GATC	3 cut(s)	298, 1018, 1879
LguI	GCTCTTC	2 cut(s)	902, 1822
LmnI	GCTCC	6 cut(s)	239, 278, 336, 1164, 1658, 1705
LweI	GCATC	1 cut(s)	160
MaeI	CTAG	2 cut(s)	108, 749
MaeII	ACGT	3 cut(s)	358, 813, 1258
MaeIII	GTNAC	5 cut(s)	687, 1483, 1522, 1601, 2026
MalI	GATC	3 cut(s)	300, 1020, 1881
MbiI	CCGCTC	1 cut(s)	1335
MboI	GATC	3 cut(s)	298, 1018, 1879
MboII	GAAGA	8 cut(s)	731, 754, 788, 919, 959, 1537, 1809, 1889
MflI	RGATCY	1 cut(s)	1879
MhlI	GDGCHC	4 cut(s)	350, 914, 1569, 1809
MlsI	TGGCCA	1 cut(s)	2052
MluCI	AATT	7 cut(s)	523, 549, 755, 785, 1183, 1209, 1325
MluNI	TGGCCA	1 cut(s)	2052
MlyI	GAGTC	4 cut(s)	830, 1228, 1734, 2026
MmeI	TCCRAC	4 cut(s)	1390, 1496, 1573, 2063
Mox20I	TGGCCA	1 cut(s)	2052
MscI	TGGCCA	1 cut(s)	2052
MseI	TTAA	3 cut(s)	6, 1611, 1985
MslI	CAYNNNNRTG	2 cut(s)	1787, 1948
Msp20I	TGGCCA	1 cut(s)	2052
MspA1I	CMGCKG	5 cut(s)	1559, 1712, 1826, 2099, 2105
MspI	CCGG	2 cut(s)	535, 1923
MspR9I	CCNGG	3 cut(s)	336, 1380, 2166
Mva1269I	GAATGC	1 cut(s)	194
MvaI	CCWGG	3 cut(s)	336, 1380, 2166
MwoI	GCNNNNNNNGC	9 cut(s)	170, 641, 745, 778, 1706, 1715, 1853, 2096, 2191
NcoI	CCATGG	2 cut(s)	2053, 2136
NdeI	CATATG	1 cut(s)	1041
NdeII	GATC	3 cut(s)	298, 1018, 1879
NlaIII	CATG	9 cut(s)	285, 497, 1130, 1786, 2027, 2057, 2140, 2158, 2198
NlaIV	GGNNCC	6 cut(s)	312, 332, 574, 657, 1807, 2163
NmeAIII	GCCGAG	1 cut(s)	1249
NmuCI	GTSAC	4 cut(s)	687, 1483, 1601, 2026
NspI	RCATGY	3 cut(s)	285, 2027, 2198
PaeI	GCATGC	2 cut(s)	285, 2198
PaqCI	CACCTGC	1 cut(s)	1673
PciSI	GCTCTTC	2 cut(s)	902, 1822
PctI	GAATGC	1 cut(s)	194
PfeI	GAWTC	5 cut(s)	323, 713, 950, 1118, 1247
PflMI	CCANNNNNTGG	3 cut(s)	1379, 1648, 2137
PleI	GAGTC	4 cut(s)	829, 1227, 1733, 2025
PmaCI	CACGTG	1 cut(s)	1259
PmlI	CACGTG	1 cut(s)	1259
PpsI	GAGTC	4 cut(s)	829, 1227, 1733, 2025
Ppu21I	YACGTR	1 cut(s)	1259
PpuMI	RGGWCCY	1 cut(s)	2162
PsiI	TTATAA	1 cut(s)	1833
Psp124BI	GAGCTC	1 cut(s)	914
Psp5II	RGGWCCY	1 cut(s)	2162
Psp6I	CCWGG	3 cut(s)	334, 1378, 2164
PspCI	CACGTG	1 cut(s)	1259
PspFI	CCCAGC	5 cut(s)	262, 1306, 1559, 1822, 2141
PspGI	CCWGG	3 cut(s)	334, 1378, 2164
PspN4I	GGNNCC	6 cut(s)	312, 332, 574, 657, 1807, 2163
PspOMI	GGGCCC	1 cut(s)	1805
PspPI	GGNCC	6 cut(s)	44, 893, 1469, 1805, 1806, 2162
PspPPI	RGGWCCY	1 cut(s)	2162
PstI	CTGCAG	4 cut(s)	166, 741, 1858, 2104
PstNI	CAGNNNCTG	5 cut(s)	341, 1343, 1541, 1712, 1715
PsuI	RGATCY	1 cut(s)	1879
PvuII	CAGCTG	5 cut(s)	1559, 1712, 1826, 2099, 2105
RsaI	GTAC	7 cut(s)	27, 306, 574, 1203, 1290, 1397, 2059
RsaNI	GTAC	7 cut(s)	26, 305, 573, 1202, 1289, 1396, 2058
RseI	CAYNNNNRTG	2 cut(s)	1787, 1948
SacI	GAGCTC	1 cut(s)	914
SapI	GCTCTTC	2 cut(s)	902, 1822
SaqAI	TTAA	3 cut(s)	6, 1611, 1985
Sau3AI	GATC	3 cut(s)	298, 1018, 1879
Sau96I	GGNCC	6 cut(s)	44, 893, 1469, 1805, 1806, 2162
SchI	GAGTC	4 cut(s)	830, 1228, 1734, 2026
ScrFI	CCNGG	3 cut(s)	336, 1380, 2166
SduI	GDGCHC	4 cut(s)	350, 914, 1569, 1809
SfaNI	GCATC	1 cut(s)	160
SfcI	CTRYAG	4 cut(s)	162, 737, 1854, 2100
SinI	GGWCC	4 cut(s)	44, 893, 1469, 2162
SmiMI	CAYNNNNRTG	2 cut(s)	1787, 1948
SmlI	CTYRAG	3 cut(s)	970, 1251, 1677
SmoI	CTYRAG	3 cut(s)	970, 1251, 1677
SpeI	ACTAGT	1 cut(s)	107
SphI	GCATGC	2 cut(s)	285, 2198
Sse9I	AATT	7 cut(s)	523, 549, 755, 785, 1183, 1209, 1325
SsiI	CCGC	6 cut(s)	498, 683, 1229, 1333, 1553, 1628
SspI	AATATT	1 cut(s)	1646
SspMI	CTAG	2 cut(s)	108, 749
SstI	GAGCTC	1 cut(s)	914
StyD4I	CCNGG	3 cut(s)	334, 1378, 2164
StyI	CCWWGG	3 cut(s)	1105, 2053, 2136
TaaI	ACNGT	7 cut(s)	76, 93, 966, 985, 1135, 1601, 2127
TaiI	ACGT	3 cut(s)	361, 816, 1261
TaqII	GACCGA	2 cut(s)	145, 912
TasI	AATT	7 cut(s)	523, 549, 755, 785, 1183, 1209, 1325
TatI	WGTACW	3 cut(s)	304, 1288, 1395
TauI	GCSGC	1 cut(s)	1232
TfiI	GAWTC	5 cut(s)	323, 713, 950, 1118, 1247
Tru1I	TTAA	3 cut(s)	6, 1611, 1985
Tru9I	TTAA	3 cut(s)	6, 1611, 1985
TscAI	CASTG	7 cut(s)	171, 196, 895, 1102, 1138, 1170, 1743
TseFI	GTSAC	4 cut(s)	687, 1483, 1601, 2026
Tsp45I	GTSAC	4 cut(s)	687, 1483, 1601, 2026
TspDTI	ATGAA	5 cut(s)	468, 1131, 1890, 1932, 1983
TspRI	CASTG	7 cut(s)	171, 196, 895, 1102, 1138, 1170, 1743
Van91I	CCANNNNNTGG	3 cut(s)	1379, 1648, 2137
VneI	GTGCAC	1 cut(s)	1565
VpaK11BI	GGWCC	4 cut(s)	44, 893, 1469, 2162
XagI	CCTNNNNNAGG	1 cut(s)	1680
XceI	RCATGY	3 cut(s)	285, 2027, 2198
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2138
XmiI	GTMKAC	2 cut(s)	269, 1914
XspI	CTAG	2 cut(s)	108, 749

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.